Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:44:55 (2172971): wrapper (7.7.26015): starting
12:44:55 (2172971): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 12:44:55] Arguments: --nthreads 8
[2025-05-29 12:44:55] Threads: 8
[2025-05-29 12:44:55] Checking for CVMFS
[2025-05-29 12:44:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 12:44:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 12:44:55] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 12:44:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 12:44:56] 2.12.6.0 8763 24403 538588 146568 2 707 28332569 32935937 32304 16776704 0 333825910 99.640 303338357 36945 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-29 12:44:56] CVMFS is ok
[2025-05-29 12:44:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-29 12:44:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-29 12:44:56] Further information can be found at the LHC@home message board.
[2025-05-29 12:44:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 12:44:56] Checking for apptainer binary...
[2025-05-29 12:44:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 12:44:56] Running /usr/bin/apptainer --version
[2025-05-29 12:44:56] apptainer version 1.4.1-1.el9
[2025-05-29 12:44:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 12:44:56] c7-9-14.aglt2.org
[2025-05-29 12:44:56] apptainer works
[2025-05-29 12:44:56] Set ATHENA_PROC_NUMBER=8
[2025-05-29 12:44:56] Set ATHENA_CORE_NUMBER=8
[2025-05-29 12:44:56] Starting ATLAS job with PandaID=6669443891
[2025-05-29 12:44:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 14:03:32]  *** The last 200 lines of the pilot log: ***
[2025-05-29 14:03:32] 2025-05-29 18:02:46,978 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6669443891/HITS.44871837._096653.pool.root.1 since it does not exist
[2025-05-29 14:03:32] 2025-05-29 18:02:47,857 | INFO     | number of running child processes to parent process 2194923: 1
[2025-05-29 14:03:32] 2025-05-29 18:02:47,857 | INFO     | maximum number of monitored processes: 6
[2025-05-29 14:03:32] 2025-05-29 18:02:48,566 | INFO     | job 6669443891 has state=finished
[2025-05-29 14:03:32] 2025-05-29 18:02:48,566 | INFO     | preparing for final server update for job 6669443891 in state='finished'
[2025-05-29 14:03:32] 2025-05-29 18:02:48,566 | INFO     | this job has now completed (state=finished)
[2025-05-29 14:03:32] 2025-05-29 18:02:48,566 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-29 14:03:32] 2025-05-29 18:02:48,566 | INFO     | log transfer has been attempted: DONE
[2025-05-29 14:03:32] 2025-05-29 18:02:48,566 | INFO     | job 6669443891 has finished - writing final server update
[2025-05-29 14:03:32] 2025-05-29 18:02:48,566 | INFO     | total number of processed events: 400 (read)
[2025-05-29 14:03:32] 2025-05-29 18:02:48,598 | INFO     | executing command: lscpu
[2025-05-29 14:03:32] 2025-05-29 18:02:48,722 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-29 14:03:32] 2025-05-29 18:02:49,557 | INFO     | 4647s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-05-29 14:03:32] 2025-05-29 18:02:50,363 | INFO     | monitor loop #336: job 0:6669443891 is in state 'finished'
[2025-05-29 14:03:32] 2025-05-29 18:02:50,363 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 14:03:32] 2025-05-29 18:02:51,376 | INFO     | PID=2186418 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-05-29 14:03:32] 2025-05-29 18:02:51,377 | INFO     | .. there are 26 such processes running
[2025-05-29 14:03:32] 2025-05-29 18:02:52,875 | INFO     | monitor loop #337: job 0:6669443891 is in state 'finished'
[2025-05-29 14:03:32] 2025-05-29 18:02:52,876 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 14:03:32] 2025-05-29 18:02:55,380 | INFO     | monitor loop #338: job 0:6669443891 is in state 'finished'
[2025-05-29 14:03:32] 2025-05-29 18:02:55,381 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 14:03:32] 2025-05-29 18:02:57,885 | INFO     | monitor loop #339: job 0:6669443891 is in state 'finished'
[2025-05-29 14:03:32] 2025-05-29 18:02:57,886 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 14:03:32] 2025-05-29 18:03:00,394 | INFO     | monitor loop #340: job 0:6669443891 is in state 'finished'
[2025-05-29 14:03:32] 2025-05-29 18:03:00,394 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 14:03:32] 2025-05-29 18:03:02,909 | INFO     | monitor loop #341: job 0:6669443891 is in state 'finished'
[2025-05-29 14:03:32] 2025-05-29 18:03:02,910 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 14:03:32] 2025-05-29 18:03:05,414 | INFO     | monitor loop #342: job 0:6669443891 is in state 'finished'
[2025-05-29 14:03:32] 2025-05-29 18:03:05,415 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 14:03:32] 2025-05-29 18:03:07,919 | INFO     | monitor loop #343: job 0:6669443891 is in state 'finished'
[2025-05-29 14:03:32] 2025-05-29 18:03:07,920 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 14:03:32] 2025-05-29 18:03:10,424 | INFO     | monitor loop #344: job 0:6669443891 is in state 'finished'
[2025-05-29 14:03:32] 2025-05-29 18:03:10,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 14:03:32] 2025-05-29 18:03:12,930 | INFO     | monitor loop #345: job 0:6669443891 is in state 'finished'
[2025-05-29 14:03:32] 2025-05-29 18:03:12,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 14:03:32] 2025-05-29 18:03:14,508 | INFO     | PID=2186418 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-29 14:03:32] 2025-05-29 18:03:14,508 | INFO     | .. there are 26 such processes running
[2025-05-29 14:03:32] 2025-05-29 18:03:15,454 | INFO     | monitor loop #346: job 0:6669443891 is in state 'finished'
[2025-05-29 14:03:32] 2025-05-29 18:03:15,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 14:03:32] 2025-05-29 18:03:16,913 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-29 14:03:32] 2025-05-29 18:03:16,914 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6669443891/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 14:03:32] 2025-05-29 18:03:16,918 | INFO     | extracted standard info from prmon json
[2025-05-29 14:03:32] 2025-05-29 18:03:16,918 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 14:03:32] 2025-05-29 18:03:16,918 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 14:03:32] 2025-05-29 18:03:16,918 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 14:03:32] 2025-05-29 18:03:16,918 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 14:03:32] 2025-05-29 18:03:16,919 | INFO     | fitting pss+swap vs Time
[2025-05-29 14:03:32] 2025-05-29 18:03:16,919 | INFO     | sum of square deviations: 97479037.0
[2025-05-29 14:03:32] 2025-05-29 18:03:16,919 | INFO     | sum of deviations: -1858301804.0000002
[2025-05-29 14:03:32] 2025-05-29 18:03:16,919 | INFO     | mean x: 1748539552.5
[2025-05-29 14:03:32] 2025-05-29 18:03:16,919 | INFO     | mean y: 2147714.617647059
[2025-05-29 14:03:32] 2025-05-29 18:03:16,919 | INFO     | -- intersect: 33335614117.00017
[2025-05-29 14:03:32] 2025-05-29 18:03:16,919 | INFO     | intersect: 33335614117.00017
[2025-05-29 14:03:32] 2025-05-29 18:03:16,919 | INFO     | chi2: 0.050543176002789965
[2025-05-29 14:03:32] 2025-05-29 18:03:16,919 | INFO     | -- intersect: 33335614117.00017
[2025-05-29 14:03:32] 2025-05-29 18:03:16,920 | INFO     | current memory leak: -19.06 B/s (using 68 data points, chi2=0.05)
[2025-05-29 14:03:32] 2025-05-29 18:03:16,920 | INFO     | ..............................
[2025-05-29 14:03:32] 2025-05-29 18:03:16,920 | INFO     | . Timing measurements:
[2025-05-29 14:03:32] 2025-05-29 18:03:16,920 | INFO     | . get job = 0 s
[2025-05-29 14:03:32] 2025-05-29 18:03:16,920 | INFO     | . initial setup = 3 s
[2025-05-29 14:03:32] 2025-05-29 18:03:16,920 | INFO     | . payload setup = 27 s
[2025-05-29 14:03:32] 2025-05-29 18:03:16,920 | INFO     | . stage-in = 0 s
[2025-05-29 14:03:32] 2025-05-29 18:03:16,920 | INFO     | . payload execution = 4572 s
[2025-05-29 14:03:32] 2025-05-29 18:03:16,920 | INFO     | . stage-out = 1 s
[2025-05-29 14:03:32] 2025-05-29 18:03:16,920 | INFO     | . log creation = 0 s
[2025-05-29 14:03:32] 2025-05-29 18:03:16,920 | INFO     | ..............................
[2025-05-29 14:03:32] 2025-05-29 18:03:17,071 | INFO     | 
[2025-05-29 14:03:32] 2025-05-29 18:03:17,072 | INFO     | job summary report
[2025-05-29 14:03:32] 2025-05-29 18:03:17,072 | INFO     | --------------------------------------------------
[2025-05-29 14:03:32] 2025-05-29 18:03:17,072 | INFO     | PanDA job id: 6669443891
[2025-05-29 14:03:32] 2025-05-29 18:03:17,072 | INFO     | task id: 44871837
[2025-05-29 14:03:32] 2025-05-29 18:03:17,072 | INFO     | errors: (none)
[2025-05-29 14:03:32] 2025-05-29 18:03:17,072 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 14:03:32] 2025-05-29 18:03:17,072 | INFO     | pilot state: finished 
[2025-05-29 14:03:32] 2025-05-29 18:03:17,072 | INFO     | transexitcode: 0
[2025-05-29 14:03:32] 2025-05-29 18:03:17,072 | INFO     | exeerrorcode: 0
[2025-05-29 14:03:32] 2025-05-29 18:03:17,072 | INFO     | exeerrordiag: 
[2025-05-29 14:03:32] 2025-05-29 18:03:17,072 | INFO     | exitcode: 0
[2025-05-29 14:03:32] 2025-05-29 18:03:17,072 | INFO     | exitmsg: OK
[2025-05-29 14:03:32] 2025-05-29 18:03:17,072 | INFO     | cpuconsumptiontime: 27587 s
[2025-05-29 14:03:32] 2025-05-29 18:03:17,072 | INFO     | nevents: 400
[2025-05-29 14:03:32] 2025-05-29 18:03:17,072 | INFO     | neventsw: 0
[2025-05-29 14:03:32] 2025-05-29 18:03:17,072 | INFO     | pid: 2194923
[2025-05-29 14:03:32] 2025-05-29 18:03:17,072 | INFO     | pgrp: 2194923
[2025-05-29 14:03:32] 2025-05-29 18:03:17,072 | INFO     | corecount: 8
[2025-05-29 14:03:32] 2025-05-29 18:03:17,073 | INFO     | event service: False
[2025-05-29 14:03:32] 2025-05-29 18:03:17,073 | INFO     | sizes: {0: 2405234, 11: 2405234, 15: 2405468, 21: 2405496, 4601: 2431533, 4602: 2440474, 4605: 2440686, 4635: 2440856}
[2025-05-29 14:03:32] 2025-05-29 18:03:17,073 | INFO     | --------------------------------------------------
[2025-05-29 14:03:32] 2025-05-29 18:03:17,073 | INFO     | 
[2025-05-29 14:03:32] 2025-05-29 18:03:17,073 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-29 14:03:32] 2025-05-29 18:03:17,142 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 14:03:32] 2025-05-29 18:03:17,142 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 14:03:32] 2025-05-29 18:03:17,142 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 14:03:32] 2025-05-29 18:03:17,142 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 14:03:32] 2025-05-29 18:03:17,142 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 14:03:32] 2025-05-29 18:03:17,142 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 14:03:32] 2025-05-29 18:03:17,142 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 14:03:32] 2025-05-29 18:03:17,142 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 14:03:32] 2025-05-29 18:03:17,142 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 14:03:32] 2025-05-29 18:03:17,142 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 14:03:32] 2025-05-29 18:03:17,142 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 14:03:32] 2025-05-29 18:03:17,143 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 14:03:32] 2025-05-29 18:03:17,143 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 14:03:32] 2025-05-29 18:03:17,143 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 14:03:32] 2025-05-29 18:03:17,143 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 14:03:32] 2025-05-29 18:03:17,143 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 14:03:32] 2025-05-29 18:03:17,143 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 14:03:32] 2025-05-29 18:03:17,143 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 14:03:32] 2025-05-29 18:03:17,143 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 14:03:32] 2025-05-29 18:03:17,143 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 14:03:32] 2025-05-29 18:03:17,143 | INFO     | job 6669443891 has completed (purged errors)
[2025-05-29 14:03:32] 2025-05-29 18:03:17,143 | INFO     | overall cleanup function is called
[2025-05-29 14:03:32] 2025-05-29 18:03:18,150 | INFO     | --- collectZombieJob: --- 10, [2194923]
[2025-05-29 14:03:32] 2025-05-29 18:03:18,151 | INFO     | zombie collector waiting for pid 2194923
[2025-05-29 14:03:32] 2025-05-29 18:03:18,151 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 14:03:32] 2025-05-29 18:03:18,151 | INFO     | collected zombie processes
[2025-05-29 14:03:32] 2025-05-29 18:03:18,151 | INFO     | will attempt to kill all subprocesses of pid=2194923
[2025-05-29 14:03:32] 2025-05-29 18:03:19,185 | INFO     | process IDs to be killed: [2194923] (in reverse order)
[2025-05-29 14:03:32] 2025-05-29 18:03:19,564 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 14:03:32] 2025-05-29 18:03:19,564 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 14:03:32] 2025-05-29 18:03:19,651 | INFO     | did not find any defunct processes belonging to 2194923
[2025-05-29 14:03:32] 2025-05-29 18:03:19,719 | INFO     | did not find any defunct processes belonging to 2194923
[2025-05-29 14:03:32] 2025-05-29 18:03:19,720 | INFO     | ready for new job
[2025-05-29 14:03:32] 2025-05-29 18:03:19,720 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 14:03:32] 2025-05-29 18:03:19,722 | INFO     | **************************************
[2025-05-29 14:03:32] 2025-05-29 18:03:19,722 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 14:03:32] 2025-05-29 18:03:19,722 | INFO     | **************************************
[2025-05-29 14:03:32] 2025-05-29 18:03:19,722 | INFO     | 
[2025-05-29 14:03:32] 2025-05-29 18:03:19,751 | INFO     | architecture information:
[2025-05-29 14:03:32] 2025-05-29 18:03:19,762 | INFO     | executing command: cat /etc/os-release
[2025-05-29 14:03:32] 2025-05-29 18:03:19,848 | INFO     | cat /etc/os-release:
[2025-05-29 14:03:32] NAME="CentOS Linux"
[2025-05-29 14:03:32] VERSION="7 (Core)"
[2025-05-29 14:03:32] ID="centos"
[2025-05-29 14:03:32] ID_LIKE="rhel fedora"
[2025-05-29 14:03:32] VERSION_ID="7"
[2025-05-29 14:03:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 14:03:32] ANSI_COLOR="0;31"
[2025-05-29 14:03:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 14:03:32] HOME_URL="https://www.centos.org/"
[2025-05-29 14:03:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 14:03:32] 
[2025-05-29 14:03:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 14:03:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 14:03:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 14:03:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 14:03:32] 
[2025-05-29 14:03:32] 2025-05-29 18:03:19,849 | INFO     | **************************************
[2025-05-29 14:03:32] 2025-05-29 18:03:20,352 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-29 14:03:32] 2025-05-29 18:03:20,447 | INFO     | sufficient remaining disk space (74909220864 B)
[2025-05-29 14:03:32] 2025-05-29 18:03:20,447 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 14:03:32] 2025-05-29 18:03:20,447 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 14:03:32] 2025-05-29 18:03:20,447 | INFO     | update_server=False
[2025-05-29 14:03:32] 2025-05-29 18:03:20,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 14:03:32] 2025-05-29 18:03:20,447 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 14:03:32] 2025-05-29 18:03:20,448 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 14:03:32] 2025-05-29 18:03:20,461 | INFO     | all data control threads have been joined
[2025-05-29 14:03:32] 2025-05-29 18:03:20,471 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-29 14:03:32] 2025-05-29 18:03:20,472 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-29 14:03:32] 2025-05-29 18:03:20,472 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 14:03:32] 2025-05-29 18:03:20,472 | INFO     | will abort loop
[2025-05-29 14:03:32] 2025-05-29 18:03:20,530 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 14:03:32] 2025-05-29 18:03:20,530 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 14:03:32] 2025-05-29 18:03:20,530 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 14:03:32] 2025-05-29 18:03:21,454 | INFO     | [job] retrieve thread has finished
[2025-05-29 14:03:32] 2025-05-29 18:03:21,468 | INFO     | [data] control thread has finished
[2025-05-29 14:03:32] 2025-05-29 18:03:21,468 | INFO     | [data] copytool_in thread has finished
[2025-05-29 14:03:32] 2025-05-29 18:03:21,478 | INFO     | [job] job monitor thread has finished
[2025-05-29 14:03:32] 2025-05-29 18:03:21,606 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 14:03:32] 2025-05-29 18:03:21,759 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 14:03:32] 2025-05-29 18:03:21,822 | INFO     | all payload control threads have been joined
[2025-05-29 14:03:32] 2025-05-29 18:03:21,853 | INFO     | all job control threads have been joined
[2025-05-29 14:03:32] 2025-05-29 18:03:22,119 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 14:03:32] 2025-05-29 18:03:22,455 | INFO     | [data] copytool_out thread has finished
[2025-05-29 14:03:32] 2025-05-29 18:03:22,727 | INFO     | [payload] validate_post thread has finished
[2025-05-29 14:03:32] 2025-05-29 18:03:22,793 | INFO     | [job] validate thread has finished
[2025-05-29 14:03:32] 2025-05-29 18:03:22,828 | INFO     | [payload] control thread has finished
[2025-05-29 14:03:32] 2025-05-29 18:03:22,859 | INFO     | [job] control thread has finished
[2025-05-29 14:03:32] 2025-05-29 18:03:22,891 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 14:03:32] 2025-05-29 18:03:22,949 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 14:03:32] 2025-05-29 18:03:22,950 | INFO     | [payload] failed_post thread has finished
[2025-05-29 14:03:32] 2025-05-29 18:03:23,125 | INFO     | [job] queue monitor thread has finished
[2025-05-29 14:03:32] 2025-05-29 18:03:24,464 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 14:03:32] 2025-05-29 18:03:25,831 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140652668266304)>', '<ExcThread(monitor, started 140652192986880)>']
[2025-05-29 14:03:32] 2025-05-29 18:03:26,589 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 14:03:32] 2025-05-29 18:03:26,590 | INFO     | [monitor] control thread has ended
[2025-05-29 14:03:32] 2025-05-29 18:03:30,857 | INFO     | all workflow threads have been joined
[2025-05-29 14:03:32] 2025-05-29 18:03:30,858 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 14:03:32] 2025-05-29 18:03:30,858 | INFO     | traces error code: 0
[2025-05-29 14:03:32] 2025-05-29 18:03:30,858 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 14:03:32] 2025-05-29 18:03:31,506 [wrapper] ==== pilot stdout END ====
[2025-05-29 14:03:32] 2025-05-29 18:03:31,549 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 14:03:32] 2025-05-29 18:03:31,592 [wrapper] pilotpid: 2186418
[2025-05-29 14:03:32] 2025-05-29 18:03:31,631 [wrapper] Pilot exit status: 0
[2025-05-29 14:03:32] 2025-05-29 18:03:31,778 [wrapper] pandaids: 6669443891
[2025-05-29 14:03:32] 2025-05-29 18:03:32,016 [wrapper] cleanup supervisor_pilot 3092205 2186419
[2025-05-29 14:03:32] 2025-05-29 18:03:32,022 [wrapper] Test setup, not cleaning
[2025-05-29 14:03:32] 2025-05-29 18:03:32,025 [wrapper] apfmon messages muted
[2025-05-29 14:03:32] 2025-05-29 18:03:32,027 [wrapper] ==== wrapper stdout END ====
[2025-05-29 14:03:32] 2025-05-29 18:03:32,062 [wrapper] ==== wrapper stderr END ====
[2025-05-29 14:03:32]  *** Error codes and diagnostics ***
[2025-05-29 14:03:32]     "exeErrorCode": 0,
[2025-05-29 14:03:32]     "exeErrorDiag": "",
[2025-05-29 14:03:32]     "pilotErrorCode": 0,
[2025-05-29 14:03:32]     "pilotErrorDiag": "",
[2025-05-29 14:03:32]  *** Listing of results directory ***
[2025-05-29 14:03:32] total 412676
[2025-05-29 14:03:32] -rw-r--r--. 1 boincer umatlas    495897 May 29 03:06 pilot3.tar.gz
[2025-05-29 14:03:32] -rw-r--r--. 1 boincer umatlas      5111 May 29 03:12 queuedata.json
[2025-05-29 14:03:32] -rwx------. 1 boincer umatlas     37140 May 29 03:14 runpilot2-wrapper.sh
[2025-05-29 14:03:32] -rw-r--r--. 1 boincer umatlas       100 May 29 12:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 14:03:32] -rwxr-xr-x. 1 boincer umatlas      7986 May 29 12:44 run_atlas
[2025-05-29 14:03:32] -rw-r--r--. 1 boincer umatlas       105 May 29 12:44 job.xml
[2025-05-29 14:03:32] -rw-r--r--. 2 boincer umatlas 225740664 May 29 12:44 EVNT.44871834._003809.pool.root.1
[2025-05-29 14:03:32] drwxrwx--x. 2 boincer umatlas      4096 May 29 12:44 shared
[2025-05-29 14:03:32] -rw-r--r--. 2 boincer umatlas    508883 May 29 12:44 input.tar.gz
[2025-05-29 14:03:32] -rw-r--r--. 2 boincer umatlas     15093 May 29 12:44 start_atlas.sh
[2025-05-29 14:03:32] -rw-r--r--. 1 boincer umatlas         0 May 29 12:44 boinc_lockfile
[2025-05-29 14:03:32] -rw-r--r--. 1 boincer umatlas      2559 May 29 12:44 pandaJob.out
[2025-05-29 14:03:32] -rw-------. 1 boincer umatlas    992701 May 29 12:45 agis_schedconf.cvmfs.json
[2025-05-29 14:03:32] -rw-------. 1 boincer umatlas   1603667 May 29 12:45 agis_ddmendpoints.agis.ALL.json
[2025-05-29 14:03:32] drwx------. 4 boincer umatlas      4096 May 29 12:45 pilot3
[2025-05-29 14:03:32] -rw-------. 1 boincer umatlas 191475101 May 29 14:02 HITS.44871837._096653.pool.root.1
[2025-05-29 14:03:32] -rw-r--r--. 1 boincer umatlas       530 May 29 14:02 boinc_task_state.xml
[2025-05-29 14:03:32] -rw-r--r--. 1 boincer umatlas      7159 May 29 14:02 init_data.xml
[2025-05-29 14:03:32] -rw-------. 1 boincer umatlas      1034 May 29 14:02 memory_monitor_summary.json
[2025-05-29 14:03:32] -rw-------. 1 boincer umatlas    313376 May 29 14:02 log.44871837._096653.job.log.tgz.1
[2025-05-29 14:03:32] -rw-------. 1 boincer umatlas        95 May 29 14:02 pilot_heartbeat.json
[2025-05-29 14:03:32] -rw-------. 1 boincer umatlas      7691 May 29 14:03 heartbeat.json
[2025-05-29 14:03:32] -rw-r--r--. 1 boincer umatlas      8192 May 29 14:03 boinc_mmap_file
[2025-05-29 14:03:32] -rw-r--r--. 1 boincer umatlas        27 May 29 14:03 wrapper_checkpoint.txt
[2025-05-29 14:03:32] -rw-------. 1 boincer umatlas      4539 May 29 14:03 pilotlog.txt
[2025-05-29 14:03:32] -rw-------. 1 boincer umatlas    449727 May 29 14:03 log.44871837._096653.job.log.1
[2025-05-29 14:03:32] -rw-------. 1 boincer umatlas       357 May 29 14:03 output.list
[2025-05-29 14:03:32] -rw-r--r--. 1 boincer umatlas       620 May 29 14:03 runtime_log
[2025-05-29 14:03:32] -rw-------. 1 boincer umatlas    778240 May 29 14:03 result.tar.gz
[2025-05-29 14:03:32] -rw-r--r--. 1 boincer umatlas      8654 May 29 14:03 runtime_log.err
[2025-05-29 14:03:32] -rw-------. 1 boincer umatlas       653 May 29 14:03 8yKNDmheme7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmF4dKDm94HCWm.diag
[2025-05-29 14:03:32] -rw-r--r--. 1 boincer umatlas     22405 May 29 14:03 stderr.txt
[2025-05-29 14:03:32] HITS file was successfully produced:
[2025-05-29 14:03:32] -rw-------. 1 boincer umatlas 191475101 May 29 14:02 shared/HITS.pool.root.1
[2025-05-29 14:03:32]  *** Contents of shared directory: ***
[2025-05-29 14:03:32] total 408724
[2025-05-29 14:03:32] -rw-r--r--. 2 boincer umatlas 225740664 May 29 12:44 ATLAS.root_0
[2025-05-29 14:03:32] -rw-r--r--. 2 boincer umatlas    508883 May 29 12:44 input.tar.gz
[2025-05-29 14:03:32] -rw-r--r--. 2 boincer umatlas     15093 May 29 12:44 start_atlas.sh
[2025-05-29 14:03:32] -rw-------. 1 boincer umatlas 191475101 May 29 14:02 HITS.pool.root.1
[2025-05-29 14:03:32] -rw-------. 1 boincer umatlas    778240 May 29 14:03 result.tar.gz
14:03:34 (2172971): run_atlas exited; CPU time 27648.334470
14:03:34 (2172971): called boinc_finish(0)

</stderr_txt>
]]>

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