Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:26:36 (2201374): wrapper (7.7.26015): starting
08:26:36 (2201374): wrapper: running run_atlas (--nthreads 12)
[2025-05-30 08:26:36] Arguments: --nthreads 12
[2025-05-30 08:26:36] Threads: 12
[2025-05-30 08:26:36] Checking for CVMFS
[2025-05-30 08:26:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 08:26:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 08:26:36] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 08:26:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 08:26:36] 2.12.7.0 1832020 8723 91912 146590 2 55 3732309 4097025 0 130560 0 10359404 99.994 1985998 8415 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-05-30 08:26:36] CVMFS is ok
[2025-05-30 08:26:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-30 08:26:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-30 08:26:36] Further information can be found at the LHC@home message board.
[2025-05-30 08:26:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 08:26:36] Checking for apptainer binary...
[2025-05-30 08:26:36] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-05-30 08:26:36] apptainer is not installed, using version from CVMFS
[2025-05-30 08:26:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 08:26:36] pckelar2.cern.ch
[2025-05-30 08:26:36] apptainer works
[2025-05-30 08:26:36] Set ATHENA_PROC_NUMBER=12
[2025-05-30 08:26:36] Set ATHENA_CORE_NUMBER=12
[2025-05-30 08:26:36] Starting ATLAS job with PandaID=6669090295
[2025-05-30 08:26:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 09:23:31]  *** The last 200 lines of the pilot log: ***
[2025-05-30 09:23:31]  is_altstaged=None
[2025-05-30 09:23:31]  is_tar=False
[2025-05-30 09:23:31]  lfn=log.44871837._093239.job.log.tgz.1
[2025-05-30 09:23:31]  mtime=0
[2025-05-30 09:23:31]  protocol_id=None
[2025-05-30 09:23:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-30 09:23:31]  replicas=None
[2025-05-30 09:23:31]  scope=mc23_13p6TeV
[2025-05-30 09:23:31]  status=None
[2025-05-30 09:23:31]  status_code=0
[2025-05-30 09:23:31]  storage_token=
[2025-05-30 09:23:31]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6669090295/log.44871837._093239.job.log.tgz.1
[2025-05-30 09:23:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/a6/log.44871837._093239.job.log.tgz.1
[2025-05-30 09:23:31]  workdir=None
[2025-05-30 09:23:31] ]
[2025-05-30 09:23:31] 2025-05-30 07:23:08,360 | INFO     | transferring file log.44871837._093239.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6669090295/log.44871837._093239.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-05-30 09:23:31] 2025-05-30 07:23:08,360 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6669090295/log.44871837._093239.job.log.tgz.1 /var/lib/boinc/slots/0/log.44871837._093239.job
[2025-05-30 09:23:31] 2025-05-30 07:23:08,372 | INFO     | adding to output.list: log.44871837._093239.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/a6/log.44871837._093239.job.log.tg
[2025-05-30 09:23:31] 2025-05-30 07:23:08,372 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-30 09:23:31] 2025-05-30 07:23:08,373 | INFO     | summary of transferred files:
[2025-05-30 09:23:31] 2025-05-30 07:23:08,373 | INFO     |  -- lfn=log.44871837._093239.job.log.tgz.1, status_code=0, status=transferred
[2025-05-30 09:23:31] 2025-05-30 07:23:08,373 | INFO     | stage-out finished correctly
[2025-05-30 09:23:31] 2025-05-30 07:23:10,859 | WARNING  | process 2212427 can no longer be monitored (due to stat problems) - aborting
[2025-05-30 09:23:31] 2025-05-30 07:23:10,859 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6669090295/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 09:23:31] 2025-05-30 07:23:10,921 | INFO     | number of running child processes to parent process 2212427: 1
[2025-05-30 09:23:31] 2025-05-30 07:23:10,921 | INFO     | maximum number of monitored processes: 6
[2025-05-30 09:23:31] 2025-05-30 07:23:11,475 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-30 09:23:31] 2025-05-30 07:23:13,014 | INFO     | PID=2205128 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-30 09:23:31] 2025-05-30 07:23:13,424 | INFO     | monitor loop #262: job 0:6669090295 is in state 'finished'
[2025-05-30 09:23:31] 2025-05-30 07:23:13,424 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-30 09:23:31] 2025-05-30 07:23:14,027 | INFO     | job 6669090295 has state=finished
[2025-05-30 09:23:31] 2025-05-30 07:23:14,027 | INFO     | preparing for final server update for job 6669090295 in state='finished'
[2025-05-30 09:23:31] 2025-05-30 07:23:14,027 | INFO     | this job has now completed (state=finished)
[2025-05-30 09:23:31] 2025-05-30 07:23:14,027 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-30 09:23:31] 2025-05-30 07:23:14,027 | INFO     | log transfer has been attempted: DONE
[2025-05-30 09:23:31] 2025-05-30 07:23:14,027 | INFO     | job 6669090295 has finished - writing final server update
[2025-05-30 09:23:31] 2025-05-30 07:23:14,028 | INFO     | total number of processed events: 400 (read)
[2025-05-30 09:23:31] 2025-05-30 07:23:14,030 | INFO     | executing command: lscpu
[2025-05-30 09:23:31] 2025-05-30 07:23:14,055 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-30 09:23:31] 2025-05-30 07:23:15,926 | INFO     | monitor loop #263: job 0:6669090295 is in state 'finished'
[2025-05-30 09:23:31] 2025-05-30 07:23:15,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-30 09:23:31] 2025-05-30 07:23:18,394 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-30 09:23:31] 2025-05-30 07:23:18,395 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6669090295/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 09:23:31] 2025-05-30 07:23:18,395 | INFO     | extracted standard info from prmon json
[2025-05-30 09:23:31] 2025-05-30 07:23:18,395 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 09:23:31] 2025-05-30 07:23:18,395 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 09:23:31] 2025-05-30 07:23:18,396 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 09:23:31] 2025-05-30 07:23:18,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 09:23:31] 2025-05-30 07:23:18,397 | INFO     | fitting pss+swap vs Time
[2025-05-30 09:23:31] 2025-05-30 07:23:18,397 | INFO     | sum of square deviations: 36465800.0
[2025-05-30 09:23:31] 2025-05-30 07:23:18,397 | INFO     | sum of deviations: 1118096816.0
[2025-05-30 09:23:31] 2025-05-30 07:23:18,397 | INFO     | mean x: 1748588195.0
[2025-05-30 09:23:31] 2025-05-30 07:23:18,398 | INFO     | mean y: 3145099.6326530613
[2025-05-30 09:23:31] 2025-05-30 07:23:18,398 | INFO     | -- intersect: -53611224894.298294
[2025-05-30 09:23:31] 2025-05-30 07:23:18,398 | INFO     | intersect: -53611224894.298294
[2025-05-30 09:23:31] 2025-05-30 07:23:18,398 | INFO     | chi2: 0.008783417394807822
[2025-05-30 09:23:31] 2025-05-30 07:23:18,398 | INFO     | -- intersect: -53611224894.298294
[2025-05-30 09:23:31] 2025-05-30 07:23:18,398 | INFO     | current memory leak: 30.66 B/s (using 49 data points, chi2=0.01)
[2025-05-30 09:23:31] 2025-05-30 07:23:18,398 | INFO     | ..............................
[2025-05-30 09:23:31] 2025-05-30 07:23:18,398 | INFO     | . Timing measurements:
[2025-05-30 09:23:31] 2025-05-30 07:23:18,398 | INFO     | . get job = 0 s
[2025-05-30 09:23:31] 2025-05-30 07:23:18,398 | INFO     | . initial setup = 1 s
[2025-05-30 09:23:31] 2025-05-30 07:23:18,398 | INFO     | . payload setup = 5 s
[2025-05-30 09:23:31] 2025-05-30 07:23:18,399 | INFO     | . stage-in = 0 s
[2025-05-30 09:23:31] 2025-05-30 07:23:18,399 | INFO     | . payload execution = 3360 s
[2025-05-30 09:23:31] 2025-05-30 07:23:18,399 | INFO     | . stage-out = 0 s
[2025-05-30 09:23:31] 2025-05-30 07:23:18,399 | INFO     | . log creation = 0 s
[2025-05-30 09:23:31] 2025-05-30 07:23:18,399 | INFO     | ..............................
[2025-05-30 09:23:31] 2025-05-30 07:23:18,449 | INFO     | 
[2025-05-30 09:23:31] 2025-05-30 07:23:18,449 | INFO     | job summary report
[2025-05-30 09:23:31] 2025-05-30 07:23:18,449 | INFO     | --------------------------------------------------
[2025-05-30 09:23:31] 2025-05-30 07:23:18,449 | INFO     | PanDA job id: 6669090295
[2025-05-30 09:23:31] 2025-05-30 07:23:18,449 | INFO     | task id: 44871837
[2025-05-30 09:23:31] 2025-05-30 07:23:18,449 | INFO     | errors: (none)
[2025-05-30 09:23:31] 2025-05-30 07:23:18,449 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 09:23:31] 2025-05-30 07:23:18,449 | INFO     | pilot state: finished 
[2025-05-30 09:23:31] 2025-05-30 07:23:18,449 | INFO     | transexitcode: 0
[2025-05-30 09:23:31] 2025-05-30 07:23:18,450 | INFO     | exeerrorcode: 0
[2025-05-30 09:23:31] 2025-05-30 07:23:18,450 | INFO     | exeerrordiag: 
[2025-05-30 09:23:31] 2025-05-30 07:23:18,450 | INFO     | exitcode: 0
[2025-05-30 09:23:31] 2025-05-30 07:23:18,450 | INFO     | exitmsg: OK
[2025-05-30 09:23:31] 2025-05-30 07:23:18,450 | INFO     | cpuconsumptiontime: 35906 s
[2025-05-30 09:23:31] 2025-05-30 07:23:18,450 | INFO     | nevents: 400
[2025-05-30 09:23:31] 2025-05-30 07:23:18,450 | INFO     | neventsw: 0
[2025-05-30 09:23:31] 2025-05-30 07:23:18,450 | INFO     | pid: 2212427
[2025-05-30 09:23:31] 2025-05-30 07:23:18,450 | INFO     | pgrp: 2212427
[2025-05-30 09:23:31] 2025-05-30 07:23:18,450 | INFO     | corecount: 12
[2025-05-30 09:23:31] 2025-05-30 07:23:18,450 | INFO     | event service: False
[2025-05-30 09:23:31] 2025-05-30 07:23:18,450 | INFO     | sizes: {0: 2405183, 3: 2405389, 11: 2405417, 3369: 2431017, 3371: 2439958, 3374: 2440014, 3381: 2440312}
[2025-05-30 09:23:31] 2025-05-30 07:23:18,450 | INFO     | --------------------------------------------------
[2025-05-30 09:23:31] 2025-05-30 07:23:18,450 | INFO     | 
[2025-05-30 09:23:31] 2025-05-30 07:23:18,450 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-05-30 09:23:31] 2025-05-30 07:23:18,464 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 09:23:31] 2025-05-30 07:23:18,464 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 09:23:31] 2025-05-30 07:23:18,464 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 09:23:31] 2025-05-30 07:23:18,464 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 09:23:31] 2025-05-30 07:23:18,465 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 09:23:31] 2025-05-30 07:23:18,465 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 09:23:31] 2025-05-30 07:23:18,465 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 09:23:31] 2025-05-30 07:23:18,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 09:23:31] 2025-05-30 07:23:18,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 09:23:31] 2025-05-30 07:23:18,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 09:23:31] 2025-05-30 07:23:18,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 09:23:31] 2025-05-30 07:23:18,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 09:23:31] 2025-05-30 07:23:18,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 09:23:31] 2025-05-30 07:23:18,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 09:23:31] 2025-05-30 07:23:18,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 09:23:31] 2025-05-30 07:23:18,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 09:23:31] 2025-05-30 07:23:18,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 09:23:31] 2025-05-30 07:23:18,465 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 09:23:31] 2025-05-30 07:23:18,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 09:23:31] 2025-05-30 07:23:18,465 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 09:23:31] 2025-05-30 07:23:18,465 | INFO     | job 6669090295 has completed (purged errors)
[2025-05-30 09:23:31] 2025-05-30 07:23:18,466 | INFO     | overall cleanup function is called
[2025-05-30 09:23:31] 2025-05-30 07:23:19,472 | INFO     | --- collectZombieJob: --- 10, [2212427]
[2025-05-30 09:23:31] 2025-05-30 07:23:19,472 | INFO     | zombie collector waiting for pid 2212427
[2025-05-30 09:23:31] 2025-05-30 07:23:19,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 09:23:31] 2025-05-30 07:23:19,472 | INFO     | collected zombie processes
[2025-05-30 09:23:31] 2025-05-30 07:23:19,472 | INFO     | will attempt to kill all subprocesses of pid=2212427
[2025-05-30 09:23:31] 2025-05-30 07:23:19,554 | INFO     | process IDs to be killed: [2212427] (in reverse order)
[2025-05-30 09:23:31] 2025-05-30 07:23:19,587 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 09:23:31] 2025-05-30 07:23:19,587 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 09:23:31] 2025-05-30 07:23:19,589 | INFO     | did not find any defunct processes belonging to 2212427
[2025-05-30 09:23:31] 2025-05-30 07:23:19,590 | INFO     | did not find any defunct processes belonging to 2212427
[2025-05-30 09:23:31] 2025-05-30 07:23:19,591 | INFO     | ready for new job
[2025-05-30 09:23:31] 2025-05-30 07:23:19,591 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 09:23:31] 2025-05-30 07:23:19,592 | INFO     | **************************************
[2025-05-30 09:23:31] 2025-05-30 07:23:19,592 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 09:23:31] 2025-05-30 07:23:19,592 | INFO     | **************************************
[2025-05-30 09:23:31] 2025-05-30 07:23:19,592 | INFO     | 
[2025-05-30 09:23:31] 2025-05-30 07:23:19,593 | INFO     | architecture information:
[2025-05-30 09:23:31] 2025-05-30 07:23:19,593 | INFO     | executing command: cat /etc/os-release
[2025-05-30 09:23:31] 2025-05-30 07:23:19,601 | INFO     | cat /etc/os-release:
[2025-05-30 09:23:31] NAME="CentOS Linux"
[2025-05-30 09:23:31] VERSION="7 (Core)"
[2025-05-30 09:23:31] ID="centos"
[2025-05-30 09:23:31] ID_LIKE="rhel fedora"
[2025-05-30 09:23:31] VERSION_ID="7"
[2025-05-30 09:23:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 09:23:31] ANSI_COLOR="0;31"
[2025-05-30 09:23:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 09:23:31] HOME_URL="https://www.centos.org/"
[2025-05-30 09:23:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 09:23:31] 
[2025-05-30 09:23:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 09:23:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 09:23:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 09:23:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 09:23:31] 
[2025-05-30 09:23:31] 2025-05-30 07:23:19,601 | INFO     | **************************************
[2025-05-30 09:23:31] 2025-05-30 07:23:20,104 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-05-30 09:23:31] 2025-05-30 07:23:20,116 | INFO     | sufficient remaining disk space (233862856704 B)
[2025-05-30 09:23:31] 2025-05-30 07:23:20,117 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 09:23:31] 2025-05-30 07:23:20,117 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 09:23:31] 2025-05-30 07:23:20,117 | INFO     | update_server=False
[2025-05-30 09:23:31] 2025-05-30 07:23:20,117 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 09:23:31] 2025-05-30 07:23:20,117 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 09:23:31] 2025-05-30 07:23:20,117 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 09:23:31] 2025-05-30 07:23:20,118 | INFO     | aborting loop
[2025-05-30 09:23:31] 2025-05-30 07:23:20,157 | INFO     | all data control threads have been joined
[2025-05-30 09:23:31] 2025-05-30 07:23:21,035 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 09:23:31] 2025-05-30 07:23:21,035 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 09:23:31] 2025-05-30 07:23:21,035 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 09:23:31] 2025-05-30 07:23:21,122 | INFO     | [job] retrieve thread has finished
[2025-05-30 09:23:31] 2025-05-30 07:23:21,123 | INFO     | [job] queue monitor thread has finished
[2025-05-30 09:23:31] 2025-05-30 07:23:21,123 | INFO     | [job] job monitor thread has finished
[2025-05-30 09:23:31] 2025-05-30 07:23:21,138 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 09:23:31] 2025-05-30 07:23:21,163 | INFO     | [data] control thread has finished
[2025-05-30 09:23:31] 2025-05-30 07:23:21,204 | INFO     | all payload control threads have been joined
[2025-05-30 09:23:31] 2025-05-30 07:23:21,347 | INFO     | all job control threads have been joined
[2025-05-30 09:23:31] 2025-05-30 07:23:21,443 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 09:23:31] 2025-05-30 07:23:21,638 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 09:23:31] 2025-05-30 07:23:21,919 | INFO     | [payload] validate_post thread has finished
[2025-05-30 09:23:31] 2025-05-30 07:23:21,957 | INFO     | [data] copytool_in thread has finished
[2025-05-30 09:23:31] 2025-05-30 07:23:22,030 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 09:23:31] 2025-05-30 07:23:22,061 | INFO     | [job] validate thread has finished
[2025-05-30 09:23:31] 2025-05-30 07:23:22,207 | INFO     | [payload] control thread has finished
[2025-05-30 09:23:31] 2025-05-30 07:23:22,348 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 09:23:31] 2025-05-30 07:23:22,353 | INFO     | [job] control thread has finished
[2025-05-30 09:23:31] 2025-05-30 07:23:22,469 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 09:23:31] 2025-05-30 07:23:22,477 | INFO     | [payload] failed_post thread has finished
[2025-05-30 09:23:31] 2025-05-30 07:23:23,449 | INFO     | [data] copytool_out thread has finished
[2025-05-30 09:23:31] 2025-05-30 07:23:26,036 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 09:23:31] 2025-05-30 07:23:26,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139987008374592)>', '<ExcThread(monitor, started 139986330445568)>']
[2025-05-30 09:23:31] 2025-05-30 07:23:27,063 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 09:23:31] 2025-05-30 07:23:27,063 | INFO     | [monitor] control thread has ended
[2025-05-30 09:23:31] 2025-05-30 07:23:31,775 | INFO     | all workflow threads have been joined
[2025-05-30 09:23:31] 2025-05-30 07:23:31,776 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 09:23:31] 2025-05-30 07:23:31,776 | INFO     | traces error code: 0
[2025-05-30 09:23:31] 2025-05-30 07:23:31,776 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 09:23:31] 2025-05-30 07:23:31,851 [wrapper] ==== pilot stdout END ====
[2025-05-30 09:23:31] 2025-05-30 07:23:31,854 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 09:23:31] 2025-05-30 07:23:31,856 [wrapper] pilotpid: 2205128
[2025-05-30 09:23:31] 2025-05-30 07:23:31,858 [wrapper] Pilot exit status: 0
[2025-05-30 09:23:31] 2025-05-30 07:23:31,866 [wrapper] pandaids: 6669090295
[2025-05-30 09:23:31] 2025-05-30 07:23:31,885 [wrapper] cleanup supervisor_pilot 2226526 2205129
[2025-05-30 09:23:31] 2025-05-30 07:23:31,887 [wrapper] Test setup, not cleaning
[2025-05-30 09:23:31] 2025-05-30 07:23:31,890 [wrapper] apfmon messages muted
[2025-05-30 09:23:31] 2025-05-30 07:23:31,892 [wrapper] ==== wrapper stdout END ====
[2025-05-30 09:23:31] 2025-05-30 07:23:31,894 [wrapper] ==== wrapper stderr END ====
[2025-05-30 09:23:31]  *** Error codes and diagnostics ***
[2025-05-30 09:23:31]     "exeErrorCode": 0,
[2025-05-30 09:23:31]     "exeErrorDiag": "",
[2025-05-30 09:23:31]     "pilotErrorCode": 0,
[2025-05-30 09:23:31]     "pilotErrorDiag": "",
[2025-05-30 09:23:31]  *** Listing of results directory ***
[2025-05-30 09:23:31] total 415704
[2025-05-30 09:23:31] -rw-r--r-- 1 boinc boinc      5111 May 29 03:34 queuedata.json
[2025-05-30 09:23:31] -rw-r--r-- 1 boinc boinc    495897 May 29 03:34 pilot3.tar.gz
[2025-05-30 09:23:31] -rwx------ 1 boinc boinc     37140 May 29 03:34 runpilot2-wrapper.sh
[2025-05-30 09:23:31] -rw-r--r-- 1 boinc boinc       100 May 30 08:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 09:23:31] -rwxr-xr-x 1 boinc boinc      7986 May 30 08:26 run_atlas
[2025-05-30 09:23:31] -rw-r--r-- 1 boinc boinc       105 May 30 08:26 job.xml
[2025-05-30 09:23:31] drwxrwx--x 2 boinc boinc        68 May 30 08:26 shared
[2025-05-30 09:23:31] -rw-r--r-- 2 boinc boinc    508879 May 30 08:26 input.tar.gz
[2025-05-30 09:23:31] -rw-r--r-- 1 boinc boinc      6472 May 30 08:26 init_data.xml
[2025-05-30 09:23:31] -rw-r--r-- 2 boinc boinc 222895025 May 30 08:26 EVNT.44871834._003625.pool.root.1
[2025-05-30 09:23:31] -rw-r--r-- 2 boinc boinc     15093 May 30 08:26 start_atlas.sh
[2025-05-30 09:23:31] -rw-r--r-- 1 boinc boinc         0 May 30 08:26 boinc_lockfile
[2025-05-30 09:23:31] -rw-r--r-- 1 boinc boinc      2558 May 30 08:26 pandaJob.out
[2025-05-30 09:23:31] -rw------- 1 boinc boinc    992366 May 30 08:26 agis_schedconf.cvmfs.json
[2025-05-30 09:23:31] -rw------- 1 boinc boinc   1603667 May 30 08:26 agis_ddmendpoints.agis.ALL.json
[2025-05-30 09:23:31] drwx------ 4 boinc boinc      4096 May 30 08:26 pilot3
[2025-05-30 09:23:31] -rw------- 1 boinc boinc 197560199 May 30 09:22 HITS.44871837._093239.pool.root.1
[2025-05-30 09:23:31] -rw-r--r-- 1 boinc boinc       529 May 30 09:23 boinc_task_state.xml
[2025-05-30 09:23:31] -rw------- 1 boinc boinc      1017 May 30 09:23 memory_monitor_summary.json
[2025-05-30 09:23:31] -rw------- 1 boinc boinc        95 May 30 09:23 pilot_heartbeat.json
[2025-05-30 09:23:31] -rw------- 1 boinc boinc    357119 May 30 09:23 log.44871837._093239.job.log.tgz.1
[2025-05-30 09:23:31] -rw------- 1 boinc boinc      7694 May 30 09:23 heartbeat.json
[2025-05-30 09:23:31] -rw-r--r-- 1 boinc boinc      8192 May 30 09:23 boinc_mmap_file
[2025-05-30 09:23:31] -rw-r--r-- 1 boinc boinc        27 May 30 09:23 wrapper_checkpoint.txt
[2025-05-30 09:23:31] -rw------- 1 boinc boinc      4354 May 30 09:23 pilotlog.txt
[2025-05-30 09:23:31] -rw------- 1 boinc boinc    342021 May 30 09:23 log.44871837._093239.job.log.1
[2025-05-30 09:23:31] -rw------- 1 boinc boinc       357 May 30 09:23 output.list
[2025-05-30 09:23:31] -rw-r--r-- 1 boinc boinc       620 May 30 09:23 runtime_log
[2025-05-30 09:23:31] -rw------- 1 boinc boinc    716800 May 30 09:23 result.tar.gz
[2025-05-30 09:23:31] -rw-r--r-- 1 boinc boinc      8683 May 30 09:23 runtime_log.err
[2025-05-30 09:23:31] -rw------- 1 boinc boinc       653 May 30 09:23 HpYLDmNLhe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKYdKDmdiqLXm.diag
[2025-05-30 09:23:31] -rw-r--r-- 1 boinc boinc     21631 May 30 09:23 stderr.txt
[2025-05-30 09:23:31] HITS file was successfully produced:
[2025-05-30 09:23:31] -rw------- 1 boinc boinc 197560199 May 30 09:22 shared/HITS.pool.root.1
[2025-05-30 09:23:31]  *** Contents of shared directory: ***
[2025-05-30 09:23:31] total 411820
[2025-05-30 09:23:31] -rw-r--r-- 2 boinc boinc    508879 May 30 08:26 input.tar.gz
[2025-05-30 09:23:31] -rw-r--r-- 2 boinc boinc 222895025 May 30 08:26 ATLAS.root_0
[2025-05-30 09:23:31] -rw-r--r-- 2 boinc boinc     15093 May 30 08:26 start_atlas.sh
[2025-05-30 09:23:31] -rw------- 1 boinc boinc 197560199 May 30 09:22 HITS.pool.root.1
[2025-05-30 09:23:31] -rw------- 1 boinc boinc    716800 May 30 09:23 result.tar.gz
09:23:33 (2201374): run_atlas exited; CPU time 35914.881591
09:23:33 (2201374): called boinc_finish(0)

</stderr_txt>
]]>

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