Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:05:35 (30981): wrapper (7.7.26015): starting
05:05:35 (30981): wrapper: running run_atlas (--nthreads 8)
[2025-05-30 05:05:35] Arguments: --nthreads 8
[2025-05-30 05:05:35] Threads: 8
[2025-05-30 05:05:35] Checking for CVMFS
[2025-05-30 05:05:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 05:05:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 05:05:36] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 05:05:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 05:05:37] 2.11.2.0 18345 25541 96664 146584 1 60 19903042 25165824 4638 130560 0 13981263 99.843 15020421 1715 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-30 05:05:37] CVMFS is ok
[2025-05-30 05:05:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 05:05:37] Checking for apptainer binary...
[2025-05-30 05:05:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-30 05:05:37] Running /usr/bin/apptainer --version
[2025-05-30 05:05:37] apptainer version 1.3.2-1.el7
[2025-05-30 05:05:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 05:05:44] cg-vwn239.simple-grid.lan
[2025-05-30 05:05:44] apptainer works
[2025-05-30 05:05:44] Set ATHENA_PROC_NUMBER=8
[2025-05-30 05:05:44] Set ATHENA_CORE_NUMBER=8
[2025-05-30 05:05:44] Starting ATLAS job with PandaID=6670268621
[2025-05-30 05:05:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 10:45:10]  *** The last 200 lines of the pilot log: ***
[2025-05-30 10:45:10] 2025-05-30 08:17:48,297 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 10:45:10] 2025-05-30 08:17:48,297 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 10:45:10] 2025-05-30 08:17:48,309 | INFO     | fitting pss+swap vs Time
[2025-05-30 10:45:10] 2025-05-30 08:17:48,310 | INFO     | sum of square deviations: 7960484140.0
[2025-05-30 10:45:10] 2025-05-30 08:17:48,313 | INFO     | sum of deviations: 63438923838.0
[2025-05-30 10:45:10] 2025-05-30 08:17:48,313 | INFO     | mean x: 1748583999.0
[2025-05-30 10:45:10] 2025-05-30 08:17:48,313 | INFO     | mean y: 2480062.484745763
[2025-05-30 10:45:10] 2025-05-30 08:17:48,313 | INFO     | -- intersect: -13932386860.936632
[2025-05-30 10:45:10] 2025-05-30 08:17:48,314 | INFO     | intersect: -13932386860.936632
[2025-05-30 10:45:10] 2025-05-30 08:17:48,314 | INFO     | chi2: 7.434895851679258
[2025-05-30 10:45:10] 2025-05-30 08:17:48,315 | INFO     | sum of square deviations: 7562532492.5
[2025-05-30 10:45:10] 2025-05-30 08:17:48,317 | INFO     | sum of deviations: 82705543868.0
[2025-05-30 10:45:10] 2025-05-30 08:17:48,318 | INFO     | mean x: 1748583846.5
[2025-05-30 10:45:10] 2025-05-30 08:17:48,318 | INFO     | mean y: 2487337.896551724
[2025-05-30 10:45:10] 2025-05-30 08:17:48,318 | INFO     | -- intersect: -19120416023.77544
[2025-05-30 10:45:10] 2025-05-30 08:17:48,318 | INFO     | intersect: -19120416023.77544
[2025-05-30 10:45:10] 2025-05-30 08:17:48,319 | INFO     | chi2: 6.655313521935344
[2025-05-30 10:45:10] 2025-05-30 08:17:48,319 | INFO     | current chi2=6.655313521935344 (change=10.48545057383468 %)
[2025-05-30 10:45:10] 2025-05-30 08:17:48,319 | INFO     | right removable region: 289
[2025-05-30 10:45:10] 2025-05-30 08:17:48,319 | INFO     | sum of square deviations: 7562532492.5
[2025-05-30 10:45:10] 2025-05-30 08:17:48,324 | INFO     | sum of deviations: -40397769537.0
[2025-05-30 10:45:10] 2025-05-30 08:17:48,325 | INFO     | mean x: 1748584151.5
[2025-05-30 10:45:10] 2025-05-30 08:17:48,325 | INFO     | mean y: 2519827.4413793106
[2025-05-30 10:45:10] 2025-05-30 08:17:48,325 | INFO     | -- intersect: 9343160629.765535
[2025-05-30 10:45:10] 2025-05-30 08:17:48,325 | INFO     | intersect: 9343160629.765535
[2025-05-30 10:45:10] 2025-05-30 08:17:48,325 | INFO     | chi2: 2.6292280217685446
[2025-05-30 10:45:10] 2025-05-30 08:17:48,326 | INFO     | current chi2=2.6292280217685446 (change=64.63665296434915 %)
[2025-05-30 10:45:10] 2025-05-30 08:17:48,326 | INFO     | sum of square deviations: 7178069470.0
[2025-05-30 10:45:10] 2025-05-30 08:17:48,329 | INFO     | sum of deviations: -92256680050.99998
[2025-05-30 10:45:10] 2025-05-30 08:17:48,329 | INFO     | mean x: 1748584304.0
[2025-05-30 10:45:10] 2025-05-30 08:17:48,329 | INFO     | mean y: 2540297.042105263
[2025-05-30 10:45:10] 2025-05-30 08:17:48,329 | INFO     | -- intersect: 22476352141.65337
[2025-05-30 10:45:10] 2025-05-30 08:17:48,329 | INFO     | intersect: 22476352141.65337
[2025-05-30 10:45:10] 2025-05-30 08:17:48,330 | INFO     | chi2: 1.1614293520996744
[2025-05-30 10:45:10] 2025-05-30 08:17:48,330 | INFO     | current chi2=1.1614293520996744 (change=55.826221899215824 %)
[2025-05-30 10:45:10] 2025-05-30 08:17:48,330 | INFO     | sum of square deviations: 6806862510.0
[2025-05-30 10:45:10] 2025-05-30 08:17:48,341 | INFO     | sum of deviations: -92668799161.99998
[2025-05-30 10:45:10] 2025-05-30 08:17:48,341 | INFO     | mean x: 1748584456.5
[2025-05-30 10:45:10] 2025-05-30 08:17:48,342 | INFO     | mean y: 2540443.9714285713
[2025-05-30 10:45:10] 2025-05-30 08:17:48,342 | INFO     | -- intersect: 23807813663.33507
[2025-05-30 10:45:10] 2025-05-30 08:17:48,342 | INFO     | intersect: 23807813663.33507
[2025-05-30 10:45:10] 2025-05-30 08:17:48,342 | INFO     | chi2: 1.1383892089157177
[2025-05-30 10:45:10] 2025-05-30 08:17:48,342 | INFO     | current chi2=1.1383892089157177 (change=1.9837748324772257 %)
[2025-05-30 10:45:10] 2025-05-30 08:17:48,343 | INFO     | left removable region: 30
[2025-05-30 10:45:10] 2025-05-30 08:17:48,343 | INFO     | sum of square deviations: 5387301010.0
[2025-05-30 10:45:10] 2025-05-30 08:17:48,345 | INFO     | sum of deviations: -46162702088.00001
[2025-05-30 10:45:10] 2025-05-30 08:17:48,345 | INFO     | mean x: 1748584731.0
[2025-05-30 10:45:10] 2025-05-30 08:17:48,346 | INFO     | mean y: 2537560.2702702703
[2025-05-30 10:45:10] 2025-05-30 08:17:48,346 | INFO     | -- intersect: 14985809492.346445
[2025-05-30 10:45:10] 2025-05-30 08:17:48,346 | INFO     | intersect: 14985809492.346445
[2025-05-30 10:45:10] 2025-05-30 08:17:48,346 | INFO     | chi2: 0.24467672767877732
[2025-05-30 10:45:10] 2025-05-30 08:17:48,346 | INFO     | -- intersect: 14985809492.346445
[2025-05-30 10:45:10] 2025-05-30 08:17:48,347 | INFO     | current memory leak: -8.57 B/s (using 259 data points, chi2=0.24)
[2025-05-30 10:45:10] 2025-05-30 08:17:48,347 | INFO     | ..............................
[2025-05-30 10:45:10] 2025-05-30 08:17:48,347 | INFO     | . Timing measurements:
[2025-05-30 10:45:10] 2025-05-30 08:17:48,348 | INFO     | . get job = 0 s
[2025-05-30 10:45:10] 2025-05-30 08:17:48,348 | INFO     | . initial setup = 9 s
[2025-05-30 10:45:10] 2025-05-30 08:17:48,348 | INFO     | . payload setup = 154 s
[2025-05-30 10:45:10] 2025-05-30 08:17:48,348 | INFO     | . stage-in = 0 s
[2025-05-30 10:45:10] 2025-05-30 08:17:48,348 | INFO     | . payload execution = 18100 s
[2025-05-30 10:45:10] 2025-05-30 08:17:48,348 | INFO     | . stage-out = 3 s
[2025-05-30 10:45:10] 2025-05-30 08:17:48,348 | INFO     | . log creation = 1 s
[2025-05-30 10:45:10] 2025-05-30 08:17:48,348 | INFO     | ..............................
[2025-05-30 10:45:10] 2025-05-30 08:17:48,493 | INFO     | 
[2025-05-30 10:45:10] 2025-05-30 08:17:48,493 | INFO     | job summary report
[2025-05-30 10:45:10] 2025-05-30 08:17:48,494 | INFO     | --------------------------------------------------
[2025-05-30 10:45:10] 2025-05-30 08:17:48,494 | INFO     | PanDA job id: 6670268621
[2025-05-30 10:45:10] 2025-05-30 08:17:48,494 | INFO     | task id: 44871837
[2025-05-30 10:45:10] 2025-05-30 08:17:48,494 | INFO     | errors: (none)
[2025-05-30 10:45:10] 2025-05-30 08:17:48,494 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 10:45:10] 2025-05-30 08:17:48,494 | INFO     | pilot state: finished 
[2025-05-30 10:45:10] 2025-05-30 08:17:48,494 | INFO     | transexitcode: 0
[2025-05-30 10:45:10] 2025-05-30 08:17:48,494 | INFO     | exeerrorcode: 0
[2025-05-30 10:45:10] 2025-05-30 08:17:48,494 | INFO     | exeerrordiag: 
[2025-05-30 10:45:10] 2025-05-30 08:17:48,494 | INFO     | exitcode: 0
[2025-05-30 10:45:10] 2025-05-30 08:17:48,494 | INFO     | exitmsg: OK
[2025-05-30 10:45:10] 2025-05-30 08:17:48,494 | INFO     | cpuconsumptiontime: 68609 s
[2025-05-30 10:45:10] 2025-05-30 08:17:48,495 | INFO     | nevents: 400
[2025-05-30 10:45:10] 2025-05-30 08:17:48,495 | INFO     | neventsw: 0
[2025-05-30 10:45:10] 2025-05-30 08:17:48,495 | INFO     | pid: 11667
[2025-05-30 10:45:10] 2025-05-30 08:17:48,495 | INFO     | pgrp: 11667
[2025-05-30 10:45:10] 2025-05-30 08:17:48,495 | INFO     | corecount: 8
[2025-05-30 10:45:10] 2025-05-30 08:17:48,495 | INFO     | event service: False
[2025-05-30 10:45:10] 2025-05-30 08:17:48,495 | INFO     | sizes: {0: 2404356, 1: 2405041, 2: 2405240, 13: 2405240, 23: 2405296, 34: 2405324, 45: 2405480, 55: 2405508, 66: 2405536, 77: 2405564, 88: 2405620, 95: 2406134, 99
[2025-05-30 10:45:10] 2025-05-30 08:17:48,495 | INFO     | --------------------------------------------------
[2025-05-30 10:45:10] 2025-05-30 08:17:48,495 | INFO     | 
[2025-05-30 10:45:10] 2025-05-30 08:17:48,495 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-05-30 10:45:10] 2025-05-30 08:17:49,012 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 10:45:10] 2025-05-30 08:17:49,013 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 10:45:10] 2025-05-30 08:17:49,013 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 10:45:10] 2025-05-30 08:17:49,013 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 10:45:10] 2025-05-30 08:17:49,013 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 10:45:10] 2025-05-30 08:17:49,013 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 10:45:10] 2025-05-30 08:17:49,013 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 10:45:10] 2025-05-30 08:17:49,013 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 10:45:10] 2025-05-30 08:17:49,013 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 10:45:10] 2025-05-30 08:17:49,013 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 10:45:10] 2025-05-30 08:17:49,014 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 10:45:10] 2025-05-30 08:17:49,014 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 10:45:10] 2025-05-30 08:17:49,014 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 10:45:10] 2025-05-30 08:17:49,014 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 10:45:10] 2025-05-30 08:17:49,014 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 10:45:10] 2025-05-30 08:17:49,014 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 10:45:10] 2025-05-30 08:17:49,014 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 10:45:10] 2025-05-30 08:17:49,014 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 10:45:10] 2025-05-30 08:17:49,014 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 10:45:10] 2025-05-30 08:17:49,014 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 10:45:10] 2025-05-30 08:17:49,015 | INFO     | job 6670268621 has completed (purged errors)
[2025-05-30 10:45:10] 2025-05-30 08:17:49,015 | INFO     | overall cleanup function is called
[2025-05-30 10:45:10] 2025-05-30 08:17:50,024 | INFO     | --- collectZombieJob: --- 10, [11667]
[2025-05-30 10:45:10] 2025-05-30 08:17:50,024 | INFO     | zombie collector waiting for pid 11667
[2025-05-30 10:45:10] 2025-05-30 08:17:50,024 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 10:45:10] 2025-05-30 08:17:50,024 | INFO     | collected zombie processes
[2025-05-30 10:45:10] 2025-05-30 08:17:50,024 | INFO     | will attempt to kill all subprocesses of pid=11667
[2025-05-30 10:45:10] 2025-05-30 08:17:50,168 | INFO     | process IDs to be killed: [11667] (in reverse order)
[2025-05-30 10:45:10] 2025-05-30 08:17:51,232 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 10:45:10] 2025-05-30 08:17:51,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 10:45:10] 2025-05-30 08:17:51,235 | INFO     | did not find any defunct processes belonging to 11667
[2025-05-30 10:45:10] 2025-05-30 08:17:51,238 | INFO     | did not find any defunct processes belonging to 11667
[2025-05-30 10:45:10] 2025-05-30 08:17:51,238 | INFO     | ready for new job
[2025-05-30 10:45:10] 2025-05-30 08:17:51,238 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 10:45:10] 2025-05-30 08:17:51,240 | INFO     | **************************************
[2025-05-30 10:45:10] 2025-05-30 08:17:51,241 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 10:45:10] 2025-05-30 08:17:51,241 | INFO     | **************************************
[2025-05-30 10:45:10] 2025-05-30 08:17:51,241 | INFO     | 
[2025-05-30 10:45:10] 2025-05-30 08:17:51,241 | INFO     | pilot is running in a VM
[2025-05-30 10:45:10] 2025-05-30 08:17:51,242 | INFO     | architecture information:
[2025-05-30 10:45:10] 2025-05-30 08:17:51,246 | INFO     | executing command: cat /etc/os-release
[2025-05-30 10:45:10] 2025-05-30 08:17:51,467 | INFO     | cat /etc/os-release:
[2025-05-30 10:45:10] NAME="CentOS Linux"
[2025-05-30 10:45:10] VERSION="7 (Core)"
[2025-05-30 10:45:10] ID="centos"
[2025-05-30 10:45:10] ID_LIKE="rhel fedora"
[2025-05-30 10:45:10] VERSION_ID="7"
[2025-05-30 10:45:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 10:45:10] ANSI_COLOR="0;31"
[2025-05-30 10:45:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 10:45:10] HOME_URL="https://www.centos.org/"
[2025-05-30 10:45:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 10:45:10] 
[2025-05-30 10:45:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 10:45:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 10:45:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 10:45:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 10:45:10] 
[2025-05-30 10:45:10] 2025-05-30 08:17:51,467 | INFO     | **************************************
[2025-05-30 10:45:10] 2025-05-30 08:17:51,971 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-05-30 10:45:10] 2025-05-30 08:17:52,225 | INFO     | sufficient remaining disk space (495933456384 B)
[2025-05-30 10:45:10] 2025-05-30 08:17:52,226 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 10:45:10] 2025-05-30 08:17:52,226 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 10:45:10] 2025-05-30 08:17:52,226 | INFO     | update_server=False
[2025-05-30 10:45:10] 2025-05-30 08:17:52,226 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 10:45:10] 2025-05-30 08:17:52,226 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-30 10:45:10] 2025-05-30 08:17:52,226 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 10:45:10] 2025-05-30 08:17:52,227 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 10:45:10] 2025-05-30 08:17:52,227 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 10:45:10] 2025-05-30 08:17:52,274 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 10:45:10] 2025-05-30 08:17:52,336 | INFO     | all data control threads have been joined
[2025-05-30 10:45:10] 2025-05-30 08:17:52,615 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-30 10:45:10] 2025-05-30 08:17:52,615 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-30 10:45:10] 2025-05-30 08:17:52,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 10:45:10] 2025-05-30 08:17:52,615 | INFO     | will abort loop
[2025-05-30 10:45:10] 2025-05-30 08:17:52,620 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 10:45:10] 2025-05-30 08:17:53,131 | INFO     | all job control threads have been joined
[2025-05-30 10:45:10] 2025-05-30 08:17:53,232 | INFO     | [job] retrieve thread has finished
[2025-05-30 10:45:10] 2025-05-30 08:17:53,317 | INFO     | [payload] failed_post thread has finished
[2025-05-30 10:45:10] 2025-05-30 08:17:53,342 | INFO     | [data] control thread has finished
[2025-05-30 10:45:10] 2025-05-30 08:17:53,432 | INFO     | all payload control threads have been joined
[2025-05-30 10:45:10] 2025-05-30 08:17:53,508 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 10:45:10] 2025-05-30 08:17:53,624 | INFO     | [job] job monitor thread has finished
[2025-05-30 10:45:10] 2025-05-30 08:17:53,705 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 10:45:10] 2025-05-30 08:17:53,889 | INFO     | [job] validate thread has finished
[2025-05-30 10:45:10] 2025-05-30 08:17:54,137 | INFO     | [job] control thread has finished
[2025-05-30 10:45:10] 2025-05-30 08:17:54,281 | INFO     | [data] copytool_out thread has finished
[2025-05-30 10:45:10] 2025-05-30 08:17:54,295 | INFO     | [data] copytool_in thread has finished
[2025-05-30 10:45:10] 2025-05-30 08:17:54,438 | INFO     | [payload] control thread has finished
[2025-05-30 10:45:10] 2025-05-30 08:17:54,498 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 10:45:10] 2025-05-30 08:17:54,514 | INFO     | [job] queue monitor thread has finished
[2025-05-30 10:45:10] 2025-05-30 08:17:54,562 | INFO     | [payload] validate_post thread has finished
[2025-05-30 10:45:10] 2025-05-30 08:17:54,583 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 10:45:10] 2025-05-30 08:17:56,630 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 10:45:10] 2025-05-30 08:18:02,534 | INFO     | job.realtimelogging is not enabled
[2025-05-30 10:45:10] 2025-05-30 08:18:03,540 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 10:45:10] 2025-05-30 08:18:05,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139743356069696)>', '<ExcThread(monitor, started 139742767200000)>']
[2025-05-30 10:45:10] 2025-05-30 08:18:06,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 10:45:10] 2025-05-30 08:18:06,310 | INFO     | [monitor] control thread has ended
[2025-05-30 10:45:10] 2025-05-30 08:18:10,339 | INFO     | all workflow threads have been joined
[2025-05-30 10:45:10] 2025-05-30 08:18:10,339 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 10:45:10] 2025-05-30 08:18:10,339 | INFO     | traces error code: 0
[2025-05-30 10:45:10] 2025-05-30 08:18:10,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 10:45:10] 2025-05-30 08:18:10,766 [wrapper] ==== pilot stdout END ====
[2025-05-30 10:45:10] 2025-05-30 08:18:10,845 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 10:45:10] 2025-05-30 08:18:10,916 [wrapper] pilotpid: 5062
[2025-05-30 10:45:10] 2025-05-30 08:18:10,965 [wrapper] Pilot exit status: 0
[2025-05-30 10:45:10] 2025-05-30 08:18:11,413 [wrapper] pandaids: 6670268621
[2025-05-30 10:45:10] 2025-05-30 08:18:12,232 [wrapper] cleanup supervisor_pilot  2857 5063
[2025-05-30 10:45:10] 2025-05-30 08:18:12,306 [wrapper] Test setup, not cleaning
[2025-05-30 10:45:10] 2025-05-30 08:18:12,382 [wrapper] apfmon messages muted
[2025-05-30 10:45:10] 2025-05-30 08:18:12,438 [wrapper] ==== wrapper stdout END ====
[2025-05-30 10:45:10] 2025-05-30 08:18:12,495 [wrapper] ==== wrapper stderr END ====
[2025-05-30 10:45:10]  *** Error codes and diagnostics ***
[2025-05-30 10:45:10]     "exeErrorCode": 0,
[2025-05-30 10:45:10]     "exeErrorDiag": "",
[2025-05-30 10:45:10]     "pilotErrorCode": 0,
[2025-05-30 10:45:10]     "pilotErrorDiag": "",
[2025-05-30 10:45:10]  *** Listing of results directory ***
[2025-05-30 10:45:10] total 418496
[2025-05-30 10:45:10] -rw-r--r--. 1 boinc boinc      5111 May 29 12:07 queuedata.json
[2025-05-30 10:45:10] -rw-r--r--. 1 boinc boinc    495897 May 29 12:07 pilot3.tar.gz
[2025-05-30 10:45:10] -rwx------. 1 boinc boinc     37140 May 29 12:08 runpilot2-wrapper.sh
[2025-05-30 10:45:10] -rw-r--r--. 1 boinc boinc       100 May 30 05:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 10:45:10] -rwxr-xr-x. 1 boinc boinc      7986 May 30 05:05 run_atlas
[2025-05-30 10:45:10] -rw-r--r--. 1 boinc boinc       105 May 30 05:05 job.xml
[2025-05-30 10:45:10] -rw-r--r--. 1 boinc boinc      6372 May 30 05:05 init_data.xml
[2025-05-30 10:45:10] -rw-r--r--. 2 boinc boinc 226932697 May 30 05:05 EVNT.44871834._002610.pool.root.1
[2025-05-30 10:45:10] -rw-r--r--. 2 boinc boinc     15093 May 30 05:05 start_atlas.sh
[2025-05-30 10:45:10] drwxrwx--x. 2 boinc boinc        68 May 30 05:05 shared
[2025-05-30 10:45:10] -rw-r--r--. 2 boinc boinc    508888 May 30 05:05 input.tar.gz
[2025-05-30 10:45:10] -rw-r--r--. 1 boinc boinc         0 May 30 05:05 boinc_lockfile
[2025-05-30 10:45:10] -rw-r--r--. 1 boinc boinc      2559 May 30 05:05 pandaJob.out
[2025-05-30 10:45:10] -rw-------. 1 boinc boinc    992350 May 30 05:08 agis_schedconf.cvmfs.json
[2025-05-30 10:45:10] drwx------. 4 boinc boinc      4096 May 30 05:08 pilot3
[2025-05-30 10:45:10] -rw-------. 1 boinc boinc 193803976 May 30 10:15 HITS.44871837._098535.pool.root.1
[2025-05-30 10:45:10] -rw-r--r--. 1 boinc boinc       530 May 30 10:15 boinc_task_state.xml
[2025-05-30 10:45:10] -rw-------. 1 boinc boinc      1014 May 30 10:16 memory_monitor_summary.json
[2025-05-30 10:45:10] -rw-------. 1 boinc boinc   1603667 May 30 10:16 agis_ddmendpoints.agis.ALL.json
[2025-05-30 10:45:10] -rw-------. 1 boinc boinc    415597 May 30 10:16 log.44871837._098535.job.log.tgz.1
[2025-05-30 10:45:10] -rw-------. 1 boinc boinc        95 May 30 10:17 pilot_heartbeat.json
[2025-05-30 10:45:10] -rw-------. 1 boinc boinc      7685 May 30 10:17 heartbeat.json
[2025-05-30 10:45:10] -rw-------. 1 boinc boinc      4797 May 30 10:18 pilotlog.txt
[2025-05-30 10:45:10] -rw-------. 1 boinc boinc   1567305 May 30 10:18 log.44871837._098535.job.log.1
[2025-05-30 10:45:10] -rw-------. 1 boinc boinc       357 May 30 10:18 output.list
[2025-05-30 10:45:10] -rw-r--r--. 1 boinc boinc       620 May 30 10:18 runtime_log
[2025-05-30 10:45:10] -rw-------. 1 boinc boinc   2007040 May 30 10:18 result.tar.gz
[2025-05-30 10:45:10] -rw-r--r--. 1 boinc boinc      8659 May 30 10:18 runtime_log.err
[2025-05-30 10:45:10] -rw-------. 1 boinc boinc       657 May 30 10:18 1mAMDmPMpe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfIeKDmtX2ahm.diag
[2025-05-30 10:45:10] -rw-r--r--. 1 boinc boinc        28 May 30 10:45 wrapper_checkpoint.txt
[2025-05-30 10:45:10] -rw-r--r--. 1 boinc boinc     20523 May 30 10:45 stderr.txt
[2025-05-30 10:45:10] -rw-r--r--. 1 boinc boinc      8192 May 30 10:45 boinc_mmap_file
[2025-05-30 10:45:10] HITS file was successfully produced:
[2025-05-30 10:45:10] -rw-------. 1 boinc boinc 193803976 May 30 10:15 shared/HITS.pool.root.1
[2025-05-30 10:45:10]  *** Contents of shared directory: ***
[2025-05-30 10:45:10] total 413356
[2025-05-30 10:45:10] -rw-r--r--. 2 boinc boinc 226932697 May 30 05:05 ATLAS.root_0
[2025-05-30 10:45:10] -rw-r--r--. 2 boinc boinc     15093 May 30 05:05 start_atlas.sh
[2025-05-30 10:45:10] -rw-r--r--. 2 boinc boinc    508888 May 30 05:05 input.tar.gz
[2025-05-30 10:45:10] -rw-------. 1 boinc boinc 193803976 May 30 10:15 HITS.pool.root.1
[2025-05-30 10:45:10] -rw-------. 1 boinc boinc   2007040 May 30 10:18 result.tar.gz
10:45:12 (30981): run_atlas exited; CPU time 68874.064161
10:45:12 (30981): called boinc_finish(0)

</stderr_txt>
]]>

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