Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:10:22 (1911104): wrapper (7.7.26015): starting
09:10:22 (1911104): wrapper: running run_atlas (--nthreads 12)
[2025-05-29 09:10:22] Arguments: --nthreads 12
[2025-05-29 09:10:22] Threads: 12
[2025-05-29 09:10:22] Checking for CVMFS
[2025-05-29 09:10:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 09:10:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 09:10:22] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 09:10:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 09:10:22] 2.11.5.0 2734493 15221 233828 146567 2 945 34452174 45568001 18082 130560 0 167417691 99.792 94350120 25289 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-29 09:10:22] CVMFS is ok
[2025-05-29 09:10:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-29 09:10:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-29 09:10:22] Further information can be found at the LHC@home message board.
[2025-05-29 09:10:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 09:10:22] Checking for apptainer binary...
[2025-05-29 09:10:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 09:10:22] Running /usr/bin/apptainer --version
[2025-05-29 09:10:22] apptainer version 1.4.0-1.el9
[2025-05-29 09:10:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 09:10:22] wns0092.triumf.lcg
[2025-05-29 09:10:22] apptainer works
[2025-05-29 09:10:22] Set ATHENA_PROC_NUMBER=12
[2025-05-29 09:10:22] Set ATHENA_CORE_NUMBER=12
[2025-05-29 09:10:22] Starting ATLAS job with PandaID=6671741295
[2025-05-29 09:10:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 09:13:22]  *** The last 200 lines of the pilot log: ***
[2025-05-29 09:13:22] 2025-05-29 16:13:09,630 | INFO     | extracted standard info from prmon json
[2025-05-29 09:13:22] 2025-05-29 16:13:09,630 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 09:13:22] 2025-05-29 16:13:09,630 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 09:13:22] 2025-05-29 16:13:09,631 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 09:13:22] 2025-05-29 16:13:09,631 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 09:13:22] 2025-05-29 16:13:09,632 | WARNING  | found no stored workdir sizes
[2025-05-29 09:13:22] 2025-05-29 16:13:09,632 | INFO     | will not add max space = 0 B to job metrics
[2025-05-29 09:13:22] 2025-05-29 16:13:09,632 | WARNING  | wrong length of table data, x=[1748535053.0], y=[1159.0] (must be same and length>=4)
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | ..............................
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . Timing measurements:
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . get job = 0 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . initial setup = 2 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . payload setup = 4 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . stage-in = 0 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . payload execution = 15 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . stage-out = 0 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . log creation = 0 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | ..............................
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6671741295/pilotlog.txt
[2025-05-29 09:13:22] 2025-05-29 16:13:09,645 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-29 09:13:22] - Log from pilotlog.txt -
[2025-05-29 09:13:22] 2025-05-29 16:13:09,630 | INFO     | extracted standard info from prmon json
[2025-05-29 09:13:22] 2025-05-29 16:13:09,630 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 09:13:22] 2025-05-29 16:13:09,630 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 09:13:22] 2025-05-29 16:13:09,631 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 09:13:22] 2025-05-29 16:13:09,631 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 09:13:22] 2025-05-29 16:13:09,632 | WARNING  | found no stored workdir sizes
[2025-05-29 09:13:22] 2025-05-29 16:13:09,632 | INFO     | will not add max space = 0 B to job metrics
[2025-05-29 09:13:22] 2025-05-29 16:13:09,632 | WARNING  | wrong length of table data, x=[1748535053.0], y=[1159.0] (must be same and length>=4)
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | ..............................
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . Timing measurements:
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . get job = 0 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . initial setup = 2 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . payload setup = 4 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . stage-in = 0 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . payload execution = 15 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . stage-out = 0 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . log creation = 0 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | ..............................
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6671741295/pilotlog.txt
[2025-05-29 09:13:22] 2025-05-29 16:13:09,645 | WARNING  | 
[2025-05-29 09:13:22] [begin log extracts]
[2025-05-29 09:13:22] - Log from pilotlog.txt -
[2025-05-29 09:13:22] 2025-05-29 16:13:09,630 | INFO     | extracted standard info from prmon json
[2025-05-29 09:13:22] 2025-05-29 16:13:09,630 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 09:13:22] 2025-05-29 16:13:09,630 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 09:13:22] 2025-05-29 16:13:09,631 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 09:13:22] 2025-05-29 16:13:09,631 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 09:13:22] 2025-05-29 16:13:09,632 | WARNING  | found no stored workdir sizes
[2025-05-29 09:13:22] 2025-05-29 16:13:09,632 | INFO     | will not add max space = 0 B to job metrics
[2025-05-29 09:13:22] 2025-05-29 16:13:09,632 | WARNING  | wrong length of table data, x=[1748535053.0], y=[1159.0] (must be same and length>=4)
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | ..............................
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . Timing measurements:
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . get job = 0 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . initial setup = 2 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . payload setup = 4 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . stage-in = 0 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . payload execution = 15 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . stage-out = 0 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | . log creation = 0 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | ..............................
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-29 09:13:22] 2025-05-29 16:13:09,633 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6671741295/pilotlog.txt
[2025-05-29 09:13:22] [end log extracts]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,645 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-29 09:13:22] 2025-05-29 16:13:09,646 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-29 09:13:22] 2025-05-29 16:13:09,710 | INFO     | 
[2025-05-29 09:13:22] 2025-05-29 16:13:09,710 | INFO     | job summary report
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | --------------------------------------------------
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | PanDA job id: 6671741295
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | task id: 44871837
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-29 09:11:00,200 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | pilot state: failed 
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | transexitcode: 65
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | exeerrorcode: 65
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | exitcode: 65
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | cpuconsumptiontime: 16 s
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | nevents: 0
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | neventsw: 0
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | pid: 1926677
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | pgrp: 1926677
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | corecount: 12
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | event service: False
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | sizes: {0: 2405181, 4: 2405387, 11: 2405415, 23: 2432835, 24: 2432835, 145: 2432977}
[2025-05-29 09:13:22] 2025-05-29 16:13:09,711 | INFO     | --------------------------------------------------
[2025-05-29 09:13:22] 2025-05-29 16:13:09,712 | INFO     | 
[2025-05-29 09:13:22] 2025-05-29 16:13:09,712 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-29 09:13:22] 2025-05-29 16:13:09,728 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,729 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,729 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,729 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,729 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,729 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,729 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,729 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,729 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,729 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,729 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,729 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,729 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,729 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,729 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,729 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,729 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,729 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 09:13:22] 2025-05-29 16:13:09,730 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,730 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 09:13:22] 2025-05-29 16:13:09,730 | INFO     | job 6671741295 has completed (purged errors)
[2025-05-29 09:13:22] 2025-05-29 16:13:09,730 | INFO     | overall cleanup function is called
[2025-05-29 09:13:22] 2025-05-29 16:13:10,736 | INFO     | --- collectZombieJob: --- 10, [1926677]
[2025-05-29 09:13:22] 2025-05-29 16:13:10,737 | INFO     | zombie collector waiting for pid 1926677
[2025-05-29 09:13:22] 2025-05-29 16:13:10,737 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 09:13:22] 2025-05-29 16:13:10,737 | INFO     | collected zombie processes
[2025-05-29 09:13:22] 2025-05-29 16:13:10,737 | INFO     | will attempt to kill all subprocesses of pid=1926677
[2025-05-29 09:13:22] 2025-05-29 16:13:10,908 | INFO     | process IDs to be killed: [1926677] (in reverse order)
[2025-05-29 09:13:22] 2025-05-29 16:13:10,978 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 09:13:22] 2025-05-29 16:13:10,978 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 09:13:22] 2025-05-29 16:13:10,986 | INFO     | did not find any defunct processes belonging to 1926677
[2025-05-29 09:13:22] 2025-05-29 16:13:10,993 | INFO     | did not find any defunct processes belonging to 1926677
[2025-05-29 09:13:22] 2025-05-29 16:13:10,993 | INFO     | ready for new job
[2025-05-29 09:13:22] 2025-05-29 16:13:10,993 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 09:13:22] 2025-05-29 16:13:10,994 | INFO     | **************************************
[2025-05-29 09:13:22] 2025-05-29 16:13:10,995 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 09:13:22] 2025-05-29 16:13:10,995 | INFO     | **************************************
[2025-05-29 09:13:22] 2025-05-29 16:13:10,995 | INFO     | 
[2025-05-29 09:13:22] 2025-05-29 16:13:10,997 | INFO     | architecture information:
[2025-05-29 09:13:22] 2025-05-29 16:13:10,997 | INFO     | executing command: cat /etc/os-release
[2025-05-29 09:13:22] 2025-05-29 16:13:11,011 | INFO     | cat /etc/os-release:
[2025-05-29 09:13:22] NAME="CentOS Linux"
[2025-05-29 09:13:22] VERSION="7 (Core)"
[2025-05-29 09:13:22] ID="centos"
[2025-05-29 09:13:22] ID_LIKE="rhel fedora"
[2025-05-29 09:13:22] VERSION_ID="7"
[2025-05-29 09:13:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 09:13:22] ANSI_COLOR="0;31"
[2025-05-29 09:13:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 09:13:22] HOME_URL="https://www.centos.org/"
[2025-05-29 09:13:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 09:13:22] 
[2025-05-29 09:13:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 09:13:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 09:13:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 09:13:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 09:13:22] 
[2025-05-29 09:13:22] 2025-05-29 16:13:11,012 | INFO     | **************************************
[2025-05-29 09:13:22] 2025-05-29 16:13:11,515 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-29 09:13:22] 2025-05-29 16:13:11,528 | INFO     | sufficient remaining disk space (1847869833216 B)
[2025-05-29 09:13:22] 2025-05-29 16:13:11,528 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 09:13:22] 2025-05-29 16:13:11,528 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 09:13:22] 2025-05-29 16:13:11,529 | INFO     | update_server=False
[2025-05-29 09:13:22] 2025-05-29 16:13:11,529 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 09:13:22] 2025-05-29 16:13:11,529 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 09:13:22] 2025-05-29 16:13:11,529 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 09:13:22] 2025-05-29 16:13:11,529 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 09:13:22] 2025-05-29 16:13:11,529 | INFO     | aborting loop
[2025-05-29 09:13:22] 2025-05-29 16:13:11,595 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 09:13:22] 2025-05-29 16:13:11,595 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 09:13:22] 2025-05-29 16:13:11,595 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 09:13:22] 2025-05-29 16:13:11,718 | INFO     | all payload control threads have been joined
[2025-05-29 09:13:22] 2025-05-29 16:13:11,786 | INFO     | all data control threads have been joined
[2025-05-29 09:13:22] 2025-05-29 16:13:12,181 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 09:13:22] 2025-05-29 16:13:12,534 | INFO     | [job] retrieve thread has finished
[2025-05-29 09:13:22] 2025-05-29 16:13:12,534 | INFO     | [job] queue monitor thread has finished
[2025-05-29 09:13:22] 2025-05-29 16:13:12,534 | INFO     | [job] job monitor thread has finished
[2025-05-29 09:13:22] 2025-05-29 16:13:12,724 | INFO     | [payload] control thread has finished
[2025-05-29 09:13:22] 2025-05-29 16:13:12,791 | INFO     | [data] control thread has finished
[2025-05-29 09:13:22] 2025-05-29 16:13:12,820 | INFO     | all job control threads have been joined
[2025-05-29 09:13:22] 2025-05-29 16:13:12,968 | INFO     | [job] validate thread has finished
[2025-05-29 09:13:22] 2025-05-29 16:13:13,098 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 09:13:22] 2025-05-29 16:13:13,185 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 09:13:22] 2025-05-29 16:13:13,379 | INFO     | [payload] validate_post thread has finished
[2025-05-29 09:13:22] 2025-05-29 16:13:13,391 | INFO     | [data] copytool_in thread has finished
[2025-05-29 09:13:22] 2025-05-29 16:13:13,465 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 09:13:22] 2025-05-29 16:13:13,534 | INFO     | [data] copytool_out thread has finished
[2025-05-29 09:13:22] 2025-05-29 16:13:13,781 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 09:13:22] 2025-05-29 16:13:13,826 | INFO     | [job] control thread has finished
[2025-05-29 09:13:22] 2025-05-29 16:13:13,929 | INFO     | [payload] failed_post thread has finished
[2025-05-29 09:13:22] 2025-05-29 16:13:16,189 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 09:13:22] 2025-05-29 16:13:17,646 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140417867749184)>', '<ExcThread(monitor, started 140417102243584)>']
[2025-05-29 09:13:22] 2025-05-29 16:13:18,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 09:13:22] 2025-05-29 16:13:18,632 | INFO     | [monitor] control thread has ended
[2025-05-29 09:13:22] 2025-05-29 16:13:22,672 | INFO     | all workflow threads have been joined
[2025-05-29 09:13:22] 2025-05-29 16:13:22,673 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 09:13:22] 2025-05-29 16:13:22,673 | INFO     | traces error code: 0
[2025-05-29 09:13:22] 2025-05-29 16:13:22,673 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 09:13:22] 2025-05-29 16:13:22,820 [wrapper] ==== pilot stdout END ====
[2025-05-29 09:13:22] 2025-05-29 16:13:22,823 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 09:13:22] 2025-05-29 16:13:22,826 [wrapper] pilotpid: 1914674
[2025-05-29 09:13:22] 2025-05-29 16:13:22,828 [wrapper] Pilot exit status: 0
[2025-05-29 09:13:22] 2025-05-29 16:13:22,838 [wrapper] pandaids: 6671741295
[2025-05-29 09:13:22] 2025-05-29 16:13:22,879 [wrapper] cleanup supervisor_pilot 1914680 1914675
[2025-05-29 09:13:22] 2025-05-29 16:13:22,882 [wrapper] Test setup, not cleaning
[2025-05-29 09:13:22] 2025-05-29 16:13:22,884 [wrapper] apfmon messages muted
[2025-05-29 09:13:22] 2025-05-29 16:13:22,886 [wrapper] ==== wrapper stdout END ====
[2025-05-29 09:13:22] 2025-05-29 16:13:22,888 [wrapper] ==== wrapper stderr END ====
[2025-05-29 09:13:22]  *** Error codes and diagnostics ***
[2025-05-29 09:13:23]     "exeErrorCode": 65,
[2025-05-29 09:13:23]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-29 09:13:23]     "pilotErrorCode": 1305,
[2025-05-29 09:13:23]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-29 09:13:23]  *** Listing of results directory ***
[2025-05-29 09:13:23] total 225304
[2025-05-29 09:13:23] -rw-r--r--. 1 boinc boinc    495897 May 29 05:27 pilot3.tar.gz
[2025-05-29 09:13:23] -rw-r--r--. 1 boinc boinc      5111 May 29 06:09 queuedata.json
[2025-05-29 09:13:23] -rwx------. 1 boinc boinc     37140 May 29 06:09 runpilot2-wrapper.sh
[2025-05-29 09:13:23] -rw-r--r--. 1 boinc boinc       100 May 29 09:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 09:13:23] -rwxr-xr-x. 1 boinc boinc      7986 May 29 09:10 run_atlas
[2025-05-29 09:13:23] -rw-r--r--. 1 boinc boinc       105 May 29 09:10 job.xml
[2025-05-29 09:13:23] -rw-r--r--. 1 boinc boinc      6602 May 29 09:10 init_data.xml
[2025-05-29 09:13:23] -rw-r--r--. 2 boinc boinc 226682764 May 29 09:10 EVNT.44871834._003367.pool.root.1
[2025-05-29 09:13:23] -rw-r--r--. 2 boinc boinc     15093 May 29 09:10 start_atlas.sh
[2025-05-29 09:13:23] drwxrwx--x. 2 boinc boinc      4096 May 29 09:10 shared
[2025-05-29 09:13:23] -rw-r--r--. 2 boinc boinc    508879 May 29 09:10 input.tar.gz
[2025-05-29 09:13:23] -rw-r--r--. 1 boinc boinc         0 May 29 09:10 boinc_lockfile
[2025-05-29 09:13:23] -rw-r--r--. 1 boinc boinc      2559 May 29 09:10 pandaJob.out
[2025-05-29 09:13:23] -rw-------. 1 boinc boinc    992701 May 29 09:10 agis_schedconf.cvmfs.json
[2025-05-29 09:13:23] -rw-------. 1 boinc boinc   1603667 May 29 09:10 agis_ddmendpoints.agis.ALL.json
[2025-05-29 09:13:23] drwx------. 4 boinc boinc      4096 May 29 09:10 pilot3
[2025-05-29 09:13:23] -rw-r--r--. 1 boinc boinc       522 May 29 09:11 boinc_task_state.xml
[2025-05-29 09:13:23] -rw-------. 1 boinc boinc       972 May 29 09:11 memory_monitor_summary.json
[2025-05-29 09:13:23] -rw-------. 1 boinc boinc     20140 May 29 09:11 log.44871837._100549.job.log.tgz.1
[2025-05-29 09:13:23] -rw-------. 1 boinc boinc        95 May 29 09:12 pilot_heartbeat.json
[2025-05-29 09:13:23] -rw-------. 1 boinc boinc      8332 May 29 09:13 heartbeat.json
[2025-05-29 09:13:23] -rw-r--r--. 1 boinc boinc      8192 May 29 09:13 boinc_mmap_file
[2025-05-29 09:13:23] -rw-r--r--. 1 boinc boinc        22 May 29 09:13 wrapper_checkpoint.txt
[2025-05-29 09:13:23] -rw-------. 1 boinc boinc      4352 May 29 09:13 pilotlog.txt
[2025-05-29 09:13:23] -rw-------. 1 boinc boinc     72719 May 29 09:13 log.44871837._100549.job.log.1
[2025-05-29 09:13:23] -rw-------. 1 boinc boinc       188 May 29 09:13 output.list
[2025-05-29 09:13:23] -rw-r--r--. 1 boinc boinc       620 May 29 09:13 runtime_log
[2025-05-29 09:13:23] -rw-------. 1 boinc boinc    112640 May 29 09:13 result.tar.gz
[2025-05-29 09:13:23] -rw-r--r--. 1 boinc boinc      8484 May 29 09:13 runtime_log.err
[2025-05-29 09:13:23] -rw-------. 1 boinc boinc       645 May 29 09:13 DX1KDmSBse7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLceKDmD0Zc7m.diag
[2025-05-29 09:13:23] -rw-r--r--. 1 boinc boinc     21425 May 29 09:13 stderr.txt
[2025-05-29 09:13:23] No HITS result produced
[2025-05-29 09:13:23]  *** Contents of shared directory: ***
[2025-05-29 09:13:23] total 222004
[2025-05-29 09:13:23] -rw-r--r--. 2 boinc boinc 226682764 May 29 09:10 ATLAS.root_0
[2025-05-29 09:13:23] -rw-r--r--. 2 boinc boinc     15093 May 29 09:10 start_atlas.sh
[2025-05-29 09:13:23] -rw-r--r--. 2 boinc boinc    508879 May 29 09:10 input.tar.gz
[2025-05-29 09:13:23] -rw-------. 1 boinc boinc    112640 May 29 09:13 result.tar.gz
09:13:24 (1911104): run_atlas exited; CPU time 19.678093
09:13:24 (1911104): called boinc_finish(0)

</stderr_txt>
]]>

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