Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:50:44 (3576353): wrapper (7.7.26015): starting
19:50:44 (3576353): wrapper: running run_atlas (--nthreads 4)
[2025-06-02 19:50:44] Arguments: --nthreads 4
[2025-06-02 19:50:44] Threads: 4
[2025-06-02 19:50:44] Checking for CVMFS
[2025-06-02 19:50:44] No cvmfs_config command found, will try listing directly
[2025-06-02 19:50:44] CVMFS is ok
[2025-06-02 19:50:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 19:50:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 19:50:44] Further information can be found at the LHC@home message board.
[2025-06-02 19:50:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 19:50:44] Checking for apptainer binary...
[2025-06-02 19:50:44] which: no apptainer in ((null))
[2025-06-02 19:50:44] apptainer is not installed, using version from CVMFS
[2025-06-02 19:50:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 19:50:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-06-02 19:50:45] apptainer works
[2025-06-02 19:50:45] Set ATHENA_PROC_NUMBER=4
[2025-06-02 19:50:45] Set ATHENA_CORE_NUMBER=4
[2025-06-02 19:50:45] Starting ATLAS job with PandaID=6670110365
[2025-06-02 19:50:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 23:25:27]  *** The last 200 lines of the pilot log: ***
[2025-06-02 23:25:28] 2025-06-02 21:23:31,210 | INFO     | mean y: 2343074.248803828
[2025-06-02 23:25:28] 2025-06-02 21:23:31,210 | INFO     | -- intersect: 11378026368.70739
[2025-06-02 23:25:28] 2025-06-02 21:23:31,211 | INFO     | intersect: 11378026368.70739
[2025-06-02 23:25:28] 2025-06-02 21:23:31,211 | INFO     | chi2: 2.5744835377773008
[2025-06-02 23:25:28] 2025-06-02 21:23:31,211 | INFO     | sum of square deviations: 2632440055.0
[2025-06-02 23:25:28] 2025-06-02 21:23:31,213 | INFO     | sum of deviations: -4579023316.000003
[2025-06-02 23:25:28] 2025-06-02 21:23:31,213 | INFO     | mean x: 1748892873.5
[2025-06-02 23:25:28] 2025-06-02 21:23:31,213 | INFO     | mean y: 2353507.9509803923
[2025-06-02 23:25:28] 2025-06-02 21:23:31,213 | INFO     | -- intersect: 3044482132.9626307
[2025-06-02 23:25:28] 2025-06-02 21:23:31,213 | INFO     | intersect: 3044482132.9626307
[2025-06-02 23:25:28] 2025-06-02 21:23:31,213 | INFO     | chi2: 1.7310302269000357
[2025-06-02 23:25:28] 2025-06-02 21:23:31,213 | INFO     | current chi2=1.7310302269000357 (change=32.76203939550014 %)
[2025-06-02 23:25:28] 2025-06-02 21:23:31,214 | INFO     | sum of square deviations: 2443580700.0
[2025-06-02 23:25:28] 2025-06-02 21:23:31,215 | INFO     | sum of deviations: -4571216230.999994
[2025-06-02 23:25:28] 2025-06-02 21:23:31,215 | INFO     | mean x: 1748892721.0
[2025-06-02 23:25:28] 2025-06-02 21:23:31,215 | INFO     | mean y: 2353514.256281407
[2025-06-02 23:25:28] 2025-06-02 21:23:31,215 | INFO     | -- intersect: 3274014152.4799113
[2025-06-02 23:25:28] 2025-06-02 21:23:31,215 | INFO     | intersect: 3274014152.4799113
[2025-06-02 23:25:28] 2025-06-02 21:23:31,216 | INFO     | chi2: 1.7301837795436656
[2025-06-02 23:25:28] 2025-06-02 21:23:31,216 | INFO     | current chi2=1.7301837795436656 (change=0.04889847347645152 %)
[2025-06-02 23:25:28] 2025-06-02 21:23:31,216 | INFO     | right removable region: 198
[2025-06-02 23:25:28] 2025-06-02 21:23:31,216 | INFO     | sum of square deviations: 2632440055.0
[2025-06-02 23:25:28] 2025-06-02 21:23:31,218 | INFO     | sum of deviations: -45805954507.0
[2025-06-02 23:25:28] 2025-06-02 21:23:31,218 | INFO     | mean x: 1748893178.5
[2025-06-02 23:25:28] 2025-06-02 21:23:31,218 | INFO     | mean y: 2363862.245098039
[2025-06-02 23:25:28] 2025-06-02 21:23:31,218 | INFO     | -- intersect: 30434100083.480198
[2025-06-02 23:25:28] 2025-06-02 21:23:31,218 | INFO     | intersect: 30434100083.480198
[2025-06-02 23:25:28] 2025-06-02 21:23:31,218 | INFO     | chi2: 1.1610859413389734
[2025-06-02 23:25:28] 2025-06-02 21:23:31,219 | INFO     | current chi2=1.1610859413389734 (change=54.90023826909356 %)
[2025-06-02 23:25:28] 2025-06-02 21:23:31,219 | INFO     | sum of square deviations: 2443580700.0
[2025-06-02 23:25:28] 2025-06-02 21:23:31,221 | INFO     | sum of deviations: -37088828807.0
[2025-06-02 23:25:28] 2025-06-02 21:23:31,221 | INFO     | mean x: 1748893331.0
[2025-06-02 23:25:28] 2025-06-02 21:23:31,221 | INFO     | mean y: 2356801.1005025124
[2025-06-02 23:25:28] 2025-06-02 21:23:31,221 | INFO     | -- intersect: 26547174966.984276
[2025-06-02 23:25:28] 2025-06-02 21:23:31,221 | INFO     | intersect: 26547174966.984276
[2025-06-02 23:25:28] 2025-06-02 21:23:31,221 | INFO     | chi2: 1.1248898090207762
[2025-06-02 23:25:28] 2025-06-02 21:23:31,221 | INFO     | current chi2=1.1248898090207762 (change=3.1174378251842 %)
[2025-06-02 23:25:28] 2025-06-02 21:23:31,222 | INFO     | left removable region: 20
[2025-06-02 23:25:28] 2025-06-02 21:23:31,222 | INFO     | sum of square deviations: 1748737904.5
[2025-06-02 23:25:28] 2025-06-02 21:23:31,223 | INFO     | sum of deviations: -2770183179.000001
[2025-06-02 23:25:28] 2025-06-02 21:23:31,223 | INFO     | mean x: 1748893300.5
[2025-06-02 23:25:28] 2025-06-02 21:23:31,223 | INFO     | mean y: 2348849.157303371
[2025-06-02 23:25:28] 2025-06-02 21:23:31,223 | INFO     | -- intersect: 2772778191.6242113
[2025-06-02 23:25:28] 2025-06-02 21:23:31,223 | INFO     | intersect: 2772778191.6242113
[2025-06-02 23:25:28] 2025-06-02 21:23:31,224 | INFO     | sufficient remaining disk space (612019208192 B)
[2025-06-02 23:25:28] 2025-06-02 21:23:31,224 | INFO     | chi2: 0.0749352998447553
[2025-06-02 23:25:28] 2025-06-02 21:23:31,225 | INFO     | -- intersect: 2772778191.6242113
[2025-06-02 23:25:28] 2025-06-02 21:23:31,225 | INFO     | current memory leak: -1.58 B/s (using 178 data points, chi2=0.07)
[2025-06-02 23:25:28] 2025-06-02 21:23:31,226 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-02 23:25:28] 2025-06-02 21:23:31,226 | INFO     | ..............................
[2025-06-02 23:25:28] 2025-06-02 21:23:31,227 | INFO     | . Timing measurements:
[2025-06-02 23:25:28] 2025-06-02 21:23:31,227 | INFO     | . get job = 0 s
[2025-06-02 23:25:28] 2025-06-02 21:23:31,227 | INFO     | . initial setup = 1 s
[2025-06-02 23:25:28] 2025-06-02 21:23:31,227 | INFO     | . payload setup = 6 s
[2025-06-02 23:25:28] 2025-06-02 21:23:31,227 | INFO     | . stage-in = 0 s
[2025-06-02 23:25:28] 2025-06-02 21:23:31,227 | INFO     | . payload execution = 12721 s
[2025-06-02 23:25:28] 2025-06-02 21:23:31,227 | INFO     | . stage-out = 1 s
[2025-06-02 23:25:28] 2025-06-02 21:23:31,227 | INFO     | . log creation = 0 s
[2025-06-02 23:25:28] 2025-06-02 21:23:31,227 | INFO     | ..............................
[2025-06-02 23:25:28] 2025-06-02 21:23:31,347 | INFO     | 
[2025-06-02 23:25:28] 2025-06-02 21:23:31,348 | INFO     | job summary report
[2025-06-02 23:25:28] 2025-06-02 21:23:31,348 | INFO     | --------------------------------------------------
[2025-06-02 23:25:28] 2025-06-02 21:23:31,348 | INFO     | PanDA job id: 6670110365
[2025-06-02 23:25:28] 2025-06-02 21:23:31,348 | INFO     | task id: 44871837
[2025-06-02 23:25:28] 2025-06-02 21:23:31,348 | INFO     | errors: (none)
[2025-06-02 23:25:28] 2025-06-02 21:23:31,348 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 23:25:28] 2025-06-02 21:23:31,348 | INFO     | pilot state: finished 
[2025-06-02 23:25:28] 2025-06-02 21:23:31,349 | INFO     | transexitcode: 0
[2025-06-02 23:25:28] 2025-06-02 21:23:31,349 | INFO     | exeerrorcode: 0
[2025-06-02 23:25:28] 2025-06-02 21:23:31,349 | INFO     | exeerrordiag: 
[2025-06-02 23:25:28] 2025-06-02 21:23:31,349 | INFO     | exitcode: 0
[2025-06-02 23:25:28] 2025-06-02 21:23:31,349 | INFO     | exitmsg: OK
[2025-06-02 23:25:28] 2025-06-02 21:23:31,349 | INFO     | cpuconsumptiontime: 49004 s
[2025-06-02 23:25:28] 2025-06-02 21:23:31,349 | INFO     | nevents: 400
[2025-06-02 23:25:28] 2025-06-02 21:23:31,349 | INFO     | neventsw: 0
[2025-06-02 23:25:28] 2025-06-02 21:23:31,349 | INFO     | pid: 3587103
[2025-06-02 23:25:28] 2025-06-02 21:23:31,349 | INFO     | pgrp: 3587103
[2025-06-02 23:25:28] 2025-06-02 21:23:31,349 | INFO     | corecount: 4
[2025-06-02 23:25:28] 2025-06-02 21:23:31,349 | INFO     | event service: False
[2025-06-02 23:25:28] 2025-06-02 21:23:31,350 | INFO     | sizes: {0: 2404356, 1: 2405223, 6: 2405429, 12: 2405457, 12732: 2435230, 12734: 2444193, 12737: 2444377, 12741: 2444547}
[2025-06-02 23:25:28] 2025-06-02 21:23:31,350 | INFO     | --------------------------------------------------
[2025-06-02 23:25:28] 2025-06-02 21:23:31,350 | INFO     | 
[2025-06-02 23:25:28] 2025-06-02 21:23:31,350 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-06-02 23:25:28] 2025-06-02 21:23:31,357 | INFO     | size of work directory /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6670110365: 2711777 B (within 2537553920 B limit)
[2025-06-02 23:25:28] 2025-06-02 21:23:31,358 | INFO     | pfn file=/scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6670110365/HITS.44871837._098393.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-02 23:25:28] 2025-06-02 21:23:31,358 | INFO     | total size of present files: 0 B (workdir size: 2711777 B)
[2025-06-02 23:25:28] 2025-06-02 21:23:31,358 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6670110365/HITS.44871837._098393.pool.root.1 since it does not exist
[2025-06-02 23:25:28] 2025-06-02 21:23:31,373 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 23:25:28] 2025-06-02 21:23:31,373 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 23:25:28] 2025-06-02 21:23:31,373 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 23:25:28] 2025-06-02 21:23:31,373 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 23:25:28] 2025-06-02 21:23:31,374 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 23:25:28] 2025-06-02 21:23:31,374 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 23:25:28] 2025-06-02 21:23:31,374 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 23:25:28] 2025-06-02 21:23:31,374 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 23:25:28] 2025-06-02 21:23:31,374 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 23:25:28] 2025-06-02 21:23:31,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 23:25:28] 2025-06-02 21:23:31,374 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 23:25:28] 2025-06-02 21:23:31,374 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 23:25:28] 2025-06-02 21:23:31,374 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 23:25:28] 2025-06-02 21:23:31,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 23:25:28] 2025-06-02 21:23:31,374 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 23:25:28] 2025-06-02 21:23:31,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 23:25:28] 2025-06-02 21:23:31,375 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 23:25:28] 2025-06-02 21:23:31,375 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 23:25:28] 2025-06-02 21:23:31,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 23:25:28] 2025-06-02 21:23:31,375 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 23:25:28] 2025-06-02 21:23:31,375 | INFO     | job 6670110365 has completed (purged errors)
[2025-06-02 23:25:28] 2025-06-02 21:23:31,375 | INFO     | overall cleanup function is called
[2025-06-02 23:25:28] 2025-06-02 21:23:32,326 | INFO     | number of running child processes to parent process 3587103: 1
[2025-06-02 23:25:28] 2025-06-02 21:23:32,326 | INFO     | maximum number of monitored processes: 6
[2025-06-02 23:25:28] 2025-06-02 21:23:32,326 | INFO     | aborting job monitoring since job object (job id=6670110365) has expired
[2025-06-02 23:25:28] 2025-06-02 21:23:32,381 | INFO     | PID=3580058 has CPU usage=16.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-02 23:25:28] 2025-06-02 21:23:32,381 | INFO     | .. there are 4 such processes running
[2025-06-02 23:25:28] 2025-06-02 21:23:32,384 | INFO     | --- collectZombieJob: --- 10, [3587103]
[2025-06-02 23:25:28] 2025-06-02 21:23:32,385 | INFO     | zombie collector waiting for pid 3587103
[2025-06-02 23:25:28] 2025-06-02 21:23:32,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 23:25:28] 2025-06-02 21:23:32,385 | INFO     | collected zombie processes
[2025-06-02 23:25:28] 2025-06-02 21:23:32,385 | INFO     | will attempt to kill all subprocesses of pid=3587103
[2025-06-02 23:25:28] 2025-06-02 21:23:32,753 | INFO     | process IDs to be killed: [3587103] (in reverse order)
[2025-06-02 23:25:28] 2025-06-02 21:23:32,861 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 23:25:28] 2025-06-02 21:23:32,861 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 23:25:28] 2025-06-02 21:23:32,874 | INFO     | did not find any defunct processes belonging to 3587103
[2025-06-02 23:25:28] 2025-06-02 21:23:32,888 | INFO     | did not find any defunct processes belonging to 3587103
[2025-06-02 23:25:28] 2025-06-02 21:23:32,888 | INFO     | ready for new job
[2025-06-02 23:25:28] 2025-06-02 21:23:32,888 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 23:25:28] 2025-06-02 21:23:32,890 | INFO     | **************************************
[2025-06-02 23:25:28] 2025-06-02 21:23:32,890 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 23:25:28] 2025-06-02 21:23:32,891 | INFO     | **************************************
[2025-06-02 23:25:28] 2025-06-02 21:23:32,891 | INFO     | 
[2025-06-02 23:25:28] 2025-06-02 21:23:32,894 | INFO     | architecture information:
[2025-06-02 23:25:28] 2025-06-02 21:23:32,895 | INFO     | executing command: cat /etc/os-release
[2025-06-02 23:25:28] 2025-06-02 21:23:32,909 | INFO     | cat /etc/os-release:
[2025-06-02 23:25:28] NAME="CentOS Linux"
[2025-06-02 23:25:28] VERSION="7 (Core)"
[2025-06-02 23:25:28] ID="centos"
[2025-06-02 23:25:28] ID_LIKE="rhel fedora"
[2025-06-02 23:25:28] VERSION_ID="7"
[2025-06-02 23:25:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 23:25:28] ANSI_COLOR="0;31"
[2025-06-02 23:25:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 23:25:28] HOME_URL="https://www.centos.org/"
[2025-06-02 23:25:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 23:25:28] 
[2025-06-02 23:25:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 23:25:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 23:25:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 23:25:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 23:25:28] 
[2025-06-02 23:25:28] 2025-06-02 21:23:32,910 | INFO     | **************************************
[2025-06-02 23:25:28] 2025-06-02 21:23:33,413 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-06-02 23:25:28] 2025-06-02 21:23:33,429 | INFO     | sufficient remaining disk space (612023402496 B)
[2025-06-02 23:25:28] 2025-06-02 21:23:33,430 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 23:25:28] 2025-06-02 21:23:33,430 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 23:25:28] 2025-06-02 21:23:33,430 | INFO     | update_server=False
[2025-06-02 23:25:28] 2025-06-02 21:23:33,430 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 23:25:28] 2025-06-02 21:23:33,431 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 23:25:28] 2025-06-02 21:23:33,431 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 23:25:28] 2025-06-02 21:23:33,431 | INFO     | aborting loop
[2025-06-02 23:25:28] 2025-06-02 21:23:33,697 | INFO     | all data control threads have been joined
[2025-06-02 23:25:28] 2025-06-02 21:23:33,798 | INFO     | all payload control threads have been joined
[2025-06-02 23:25:28] 2025-06-02 21:23:34,060 | INFO     | all job control threads have been joined
[2025-06-02 23:25:28] 2025-06-02 21:23:34,387 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 23:25:28] 2025-06-02 21:23:34,387 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 23:25:28] 2025-06-02 21:23:34,387 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 23:25:28] 2025-06-02 21:23:34,436 | INFO     | [job] retrieve thread has finished
[2025-06-02 23:25:28] 2025-06-02 21:23:34,436 | INFO     | [job] job monitor thread has finished
[2025-06-02 23:25:28] 2025-06-02 21:23:34,591 | INFO     | [payload] validate_post thread has finished
[2025-06-02 23:25:28] 2025-06-02 21:23:34,702 | INFO     | [data] control thread has finished
[2025-06-02 23:25:28] 2025-06-02 21:23:34,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 23:25:28] 2025-06-02 21:23:34,804 | INFO     | [payload] control thread has finished
[2025-06-02 23:25:28] 2025-06-02 21:23:34,912 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 23:25:28] 2025-06-02 21:23:34,918 | INFO     | [job] validate thread has finished
[2025-06-02 23:25:28] 2025-06-02 21:23:35,062 | INFO     | [job] control thread has finished
[2025-06-02 23:25:28] 2025-06-02 21:23:35,245 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 23:25:28] 2025-06-02 21:23:35,367 | INFO     | [data] copytool_in thread has finished
[2025-06-02 23:25:28] 2025-06-02 21:23:35,490 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 23:25:28] 2025-06-02 21:23:35,634 | INFO     | [payload] failed_post thread has finished
[2025-06-02 23:25:28] 2025-06-02 21:23:35,850 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 23:25:28] 2025-06-02 21:23:36,358 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 23:25:28] 2025-06-02 21:23:36,769 | INFO     | [data] copytool_out thread has finished
[2025-06-02 23:25:28] 2025-06-02 21:23:37,363 | INFO     | [job] queue monitor thread has finished
[2025-06-02 23:25:28] 2025-06-02 21:23:37,437 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 23:25:28] 2025-06-02 21:23:39,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22838330066752)>', '<ExcThread(monitor, started 22838090102528)>']
[2025-06-02 23:25:28] 2025-06-02 21:23:39,413 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 23:25:28] 2025-06-02 21:23:39,413 | INFO     | [monitor] control thread has ended
[2025-06-02 23:25:28] 2025-06-02 21:23:44,433 | INFO     | all workflow threads have been joined
[2025-06-02 23:25:28] 2025-06-02 21:23:44,433 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 23:25:28] 2025-06-02 21:23:44,433 | INFO     | traces error code: 0
[2025-06-02 23:25:28] 2025-06-02 21:23:44,434 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 23:25:28] 2025-06-02 21:23:44,621 [wrapper] ==== pilot stdout END ====
[2025-06-02 23:25:28] 2025-06-02 21:23:44,624 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 23:25:28] 2025-06-02 21:23:44,627 [wrapper] pilotpid: 3580058
[2025-06-02 23:25:28] 2025-06-02 21:23:44,630 [wrapper] Pilot exit status: 0
[2025-06-02 23:25:28] 2025-06-02 21:23:44,641 [wrapper] pandaids: 6670110365
[2025-06-02 23:25:28] 2025-06-02 21:23:44,715 [wrapper] cleanup supervisor_pilot 3817964 3580059
[2025-06-02 23:25:28] 2025-06-02 21:23:44,719 [wrapper] Test setup, not cleaning
[2025-06-02 23:25:28] 2025-06-02 21:23:44,722 [wrapper] apfmon messages muted
[2025-06-02 23:25:28] 2025-06-02 21:23:44,725 [wrapper] ==== wrapper stdout END ====
[2025-06-02 23:25:28] 2025-06-02 21:23:44,728 [wrapper] ==== wrapper stderr END ====
[2025-06-02 23:25:28]  *** Error codes and diagnostics ***
[2025-06-02 23:25:28]     "exeErrorCode": 0,
[2025-06-02 23:25:28]     "exeErrorDiag": "",
[2025-06-02 23:25:28]     "pilotErrorCode": 0,
[2025-06-02 23:25:28]     "pilotErrorDiag": "",
[2025-06-02 23:25:28]  *** Listing of results directory ***
[2025-06-02 23:25:28] total 411096
[2025-06-02 23:25:28] -rw-r--r-- 1 boinc boinc      5111 May 29 11:38 queuedata.json
[2025-06-02 23:25:28] -rw-r--r-- 1 boinc boinc    495897 May 29 11:39 pilot3.tar.gz
[2025-06-02 23:25:28] -rwx------ 1 boinc boinc     37140 May 29 11:39 runpilot2-wrapper.sh
[2025-06-02 23:25:28] -rw-r--r-- 1 boinc boinc       100 Jun  2 19:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 23:25:28] -rwxr-xr-x 1 boinc boinc      7986 Jun  2 19:50 run_atlas
[2025-06-02 23:25:28] -rw-r--r-- 1 boinc boinc       105 Jun  2 19:50 job.xml
[2025-06-02 23:25:28] -rw-r--r-- 1 boinc boinc      6636 Jun  2 19:50 init_data.xml
[2025-06-02 23:25:28] -rw-r--r-- 2 boinc boinc 222907930 Jun  2 19:50 EVNT.44871834._002408.pool.root.1
[2025-06-02 23:25:28] -rw-r--r-- 2 boinc boinc     15093 Jun  2 19:50 start_atlas.sh
[2025-06-02 23:25:28] drwxrwx--x 2 boinc boinc      4096 Jun  2 19:50 shared
[2025-06-02 23:25:28] -rw-r--r-- 2 boinc boinc    508883 Jun  2 19:50 input.tar.gz
[2025-06-02 23:25:28] -rw-r--r-- 1 boinc boinc         0 Jun  2 19:50 boinc_lockfile
[2025-06-02 23:25:28] -rw-r--r-- 1 boinc boinc      2559 Jun  2 19:50 pandaJob.out
[2025-06-02 23:25:28] -rw------- 1 boinc boinc    988298 Jun  2 19:50 agis_schedconf.cvmfs.json
[2025-06-02 23:25:28] drwx------ 4 boinc boinc      4096 Jun  2 19:50 pilot3
[2025-06-02 23:25:28] -rw------- 1 boinc boinc 191177375 Jun  2 23:22 HITS.44871837._098393.pool.root.1
[2025-06-02 23:25:28] -rw------- 1 boinc boinc        95 Jun  2 23:22 pilot_heartbeat.json
[2025-06-02 23:25:28] -rw-r--r-- 1 boinc boinc       529 Jun  2 23:23 boinc_task_state.xml
[2025-06-02 23:25:28] -rw------- 1 boinc boinc      1038 Jun  2 23:23 memory_monitor_summary.json
[2025-06-02 23:25:28] -rw------- 1 boinc boinc   1603667 Jun  2 23:23 agis_ddmendpoints.agis.ALL.json
[2025-06-02 23:25:28] -rw------- 1 boinc boinc    326333 Jun  2 23:23 log.44871837._098393.job.log.tgz.1
[2025-06-02 23:25:28] -rw------- 1 boinc boinc      7730 Jun  2 23:23 heartbeat.json
[2025-06-02 23:25:28] -rw------- 1 boinc boinc      4363 Jun  2 23:23 pilotlog.txt
[2025-06-02 23:25:28] -rw------- 1 boinc boinc   1192514 Jun  2 23:23 log.44871837._098393.job.log.1
[2025-06-02 23:25:28] -rw------- 1 boinc boinc       357 Jun  2 23:23 output.list
[2025-06-02 23:25:28] -rw-r--r-- 1 boinc boinc       620 Jun  2 23:23 runtime_log
[2025-06-02 23:25:28] -rw------- 1 boinc boinc   1536000 Jun  2 23:23 result.tar.gz
[2025-06-02 23:25:28] -rw------- 1 boinc boinc       664 Jun  2 23:23 s8sKDmouoe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnHeKDmwtDJDo.diag
[2025-06-02 23:25:28] -rw-r--r-- 1 boinc boinc      9026 Jun  2 23:23 runtime_log.err
[2025-06-02 23:25:28] -rw-r--r-- 1 boinc boinc      8192 Jun  2 23:25 boinc_mmap_file
[2025-06-02 23:25:28] -rw-r--r-- 1 boinc boinc        27 Jun  2 23:25 wrapper_checkpoint.txt
[2025-06-02 23:25:28] -rw-r--r-- 1 boinc boinc     21125 Jun  2 23:25 stderr.txt
[2025-06-02 23:25:28] HITS file was successfully produced:
[2025-06-02 23:25:28] -rw------- 1 boinc boinc 191177375 Jun  2 23:22 shared/HITS.pool.root.1
[2025-06-02 23:25:28]  *** Contents of shared directory: ***
[2025-06-02 23:25:28] total 406408
[2025-06-02 23:25:28] -rw-r--r-- 2 boinc boinc 222907930 Jun  2 19:50 ATLAS.root_0
[2025-06-02 23:25:28] -rw-r--r-- 2 boinc boinc     15093 Jun  2 19:50 start_atlas.sh
[2025-06-02 23:25:28] -rw-r--r-- 2 boinc boinc    508883 Jun  2 19:50 input.tar.gz
[2025-06-02 23:25:28] -rw------- 1 boinc boinc 191177375 Jun  2 23:22 HITS.pool.root.1
[2025-06-02 23:25:28] -rw------- 1 boinc boinc   1536000 Jun  2 23:23 result.tar.gz
23:25:29 (3576353): run_atlas exited; CPU time 49539.180391
23:25:29 (3576353): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN