Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:23:24 (341489): wrapper (7.7.26015): starting
09:23:24 (341489): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 09:23:24] Arguments: --nthreads 4
[2025-06-03 09:23:24] Threads: 4
[2025-06-03 09:23:24] Checking for CVMFS
[2025-06-03 09:23:24] No cvmfs_config command found, will try listing directly
[2025-06-03 09:23:24] CVMFS is ok
[2025-06-03 09:23:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 09:23:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 09:23:24] Further information can be found at the LHC@home message board.
[2025-06-03 09:23:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:23:24] Checking for apptainer binary...
[2025-06-03 09:23:24] which: no apptainer in ((null))
[2025-06-03 09:23:24] apptainer is not installed, using version from CVMFS
[2025-06-03 09:23:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:23:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot72/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-06-03 09:23:25] apptainer works
[2025-06-03 09:23:25] Set ATHENA_PROC_NUMBER=4
[2025-06-03 09:23:25] Set ATHENA_CORE_NUMBER=4
[2025-06-03 09:23:25] Starting ATLAS job with PandaID=6669238040
[2025-06-03 09:23:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot72/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:57:10]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:57:10] 2025-06-03 10:51:18,248 | INFO     | mean y: 2333344.6281407033
[2025-06-03 12:57:10] 2025-06-03 10:51:18,248 | INFO     | -- intersect: -5056815286.451799
[2025-06-03 12:57:10] 2025-06-03 10:51:18,248 | INFO     | intersect: -5056815286.451799
[2025-06-03 12:57:10] 2025-06-03 10:51:18,248 | INFO     | chi2: 0.004842811057643509
[2025-06-03 12:57:10] 2025-06-03 10:51:18,248 | INFO     | current chi2=0.004842811057643509 (change=99.680044315166 %)
[2025-06-03 12:57:10] 2025-06-03 10:51:18,249 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 12:57:10] 2025-06-03 10:51:18,250 | INFO     | sum of deviations: 5589178527.500001
[2025-06-03 12:57:10] 2025-06-03 10:51:18,250 | INFO     | mean x: 1748941948.5
[2025-06-03 12:57:10] 2025-06-03 10:51:18,250 | INFO     | mean y: 2334588.7989690723
[2025-06-03 12:57:10] 2025-06-03 10:51:18,250 | INFO     | -- intersect: -4315353863.322586
[2025-06-03 12:57:10] 2025-06-03 10:51:18,250 | INFO     | intersect: -4315353863.322586
[2025-06-03 12:57:10] 2025-06-03 10:51:18,250 | INFO     | chi2: 0.0007952129793520463
[2025-06-03 12:57:10] 2025-06-03 10:51:18,251 | INFO     | current chi2=0.0007952129793520463 (change=83.5795167334281 %)
[2025-06-03 12:57:10] 2025-06-03 10:51:18,251 | INFO     | sum of square deviations: 2093397390.0
[2025-06-03 12:57:10] 2025-06-03 10:51:18,252 | INFO     | sum of deviations: 4609015674.0
[2025-06-03 12:57:10] 2025-06-03 10:51:18,252 | INFO     | mean x: 1748942101.0
[2025-06-03 12:57:10] 2025-06-03 10:51:18,252 | INFO     | mean y: 2335463.1428571427
[2025-06-03 12:57:10] 2025-06-03 10:51:18,252 | INFO     | -- intersect: -3848295857.472046
[2025-06-03 12:57:10] 2025-06-03 10:51:18,252 | INFO     | intersect: -3848295857.472046
[2025-06-03 12:57:10] 2025-06-03 10:51:18,253 | INFO     | chi2: 0.0003995852949391794
[2025-06-03 12:57:10] 2025-06-03 10:51:18,253 | INFO     | current chi2=0.0003995852949391794 (change=49.75116034137564 %)
[2025-06-03 12:57:10] 2025-06-03 10:51:18,253 | INFO     | sum of square deviations: 1931608310.0
[2025-06-03 12:57:10] 2025-06-03 10:51:18,254 | INFO     | sum of deviations: 3933181820.500001
[2025-06-03 12:57:10] 2025-06-03 10:51:18,254 | INFO     | mean x: 1748942253.5
[2025-06-03 12:57:10] 2025-06-03 10:51:18,254 | INFO     | mean y: 2336100.3532608696
[2025-06-03 12:57:10] 2025-06-03 10:51:18,254 | INFO     | -- intersect: -3558897220.5835824
[2025-06-03 12:57:10] 2025-06-03 10:51:18,255 | INFO     | intersect: -3558897220.5835824
[2025-06-03 12:57:10] 2025-06-03 10:51:18,255 | INFO     | chi2: 0.0002726962063464424
[2025-06-03 12:57:10] 2025-06-03 10:51:18,255 | INFO     | current chi2=0.0002726962063464424 (change=31.75519474810772 %)
[2025-06-03 12:57:10] 2025-06-03 10:51:18,255 | INFO     | sum of square deviations: 1778377530.0
[2025-06-03 12:57:10] 2025-06-03 10:51:18,256 | INFO     | sum of deviations: 3342406611.0
[2025-06-03 12:57:10] 2025-06-03 10:51:18,256 | INFO     | mean x: 1748942406.0
[2025-06-03 12:57:10] 2025-06-03 10:51:18,256 | INFO     | mean y: 2336686.8547486034
[2025-06-03 12:57:10] 2025-06-03 10:51:18,256 | INFO     | -- intersect: -3284747501.6598496
[2025-06-03 12:57:10] 2025-06-03 10:51:18,257 | INFO     | intersect: -3284747501.6598496
[2025-06-03 12:57:10] 2025-06-03 10:51:18,257 | INFO     | chi2: 0.00015709429219871668
[2025-06-03 12:57:10] 2025-06-03 10:51:18,257 | INFO     | current chi2=0.00015709429219871668 (change=42.39219741871332 %)
[2025-06-03 12:57:10] 2025-06-03 10:51:18,257 | INFO     | sum of square deviations: 1633472487.5
[2025-06-03 12:57:10] 2025-06-03 10:51:18,258 | INFO     | sum of deviations: 2937923480.0
[2025-06-03 12:57:10] 2025-06-03 10:51:18,258 | INFO     | mean x: 1748942558.5
[2025-06-03 12:57:10] 2025-06-03 10:51:18,258 | INFO     | mean y: 2337112.252873563
[2025-06-03 12:57:10] 2025-06-03 10:51:18,258 | INFO     | -- intersect: -3143268000.2350855
[2025-06-03 12:57:10] 2025-06-03 10:51:18,259 | INFO     | intersect: -3143268000.2350855
[2025-06-03 12:57:10] 2025-06-03 10:51:18,259 | INFO     | chi2: 0.00013240895640324846
[2025-06-03 12:57:10] 2025-06-03 10:51:18,259 | INFO     | current chi2=0.00013240895640324846 (change=15.713706367028571 %)
[2025-06-03 12:57:10] 2025-06-03 10:51:18,259 | INFO     | left removable region: 60
[2025-06-03 12:57:10] 2025-06-03 10:51:18,259 | INFO     | sum of square deviations: 814878534.5
[2025-06-03 12:57:10] 2025-06-03 10:51:18,260 | INFO     | sum of deviations: 1346267895.5
[2025-06-03 12:57:10] 2025-06-03 10:51:18,260 | INFO     | mean x: 1748943290.5
[2025-06-03 12:57:10] 2025-06-03 10:51:18,260 | INFO     | mean y: 2338591.688405797
[2025-06-03 12:57:10] 2025-06-03 10:51:18,260 | INFO     | -- intersect: -2887105789.73097
[2025-06-03 12:57:10] 2025-06-03 10:51:18,260 | INFO     | intersect: -2887105789.73097
[2025-06-03 12:57:10] 2025-06-03 10:51:18,260 | INFO     | chi2: 3.4389568772199165e-05
[2025-06-03 12:57:10] 2025-06-03 10:51:18,261 | INFO     | -- intersect: -2887105789.73097
[2025-06-03 12:57:10] 2025-06-03 10:51:18,261 | INFO     | current memory leak: 1.65 B/s (using 138 data points, chi2=0.00)
[2025-06-03 12:57:10] 2025-06-03 10:51:18,261 | INFO     | ..............................
[2025-06-03 12:57:10] 2025-06-03 10:51:18,261 | INFO     | . Timing measurements:
[2025-06-03 12:57:10] 2025-06-03 10:51:18,261 | INFO     | . get job = 0 s
[2025-06-03 12:57:10] 2025-06-03 10:51:18,262 | INFO     | . initial setup = 1 s
[2025-06-03 12:57:10] 2025-06-03 10:51:18,262 | INFO     | . payload setup = 9 s
[2025-06-03 12:57:10] 2025-06-03 10:51:18,262 | INFO     | . stage-in = 0 s
[2025-06-03 12:57:10] 2025-06-03 10:51:18,262 | INFO     | . payload execution = 12420 s
[2025-06-03 12:57:10] 2025-06-03 10:51:18,262 | INFO     | . stage-out = 1 s
[2025-06-03 12:57:10] 2025-06-03 10:51:18,262 | INFO     | . log creation = 0 s
[2025-06-03 12:57:10] 2025-06-03 10:51:18,262 | INFO     | ..............................
[2025-06-03 12:57:10] 2025-06-03 10:51:18,466 | INFO     | 
[2025-06-03 12:57:10] 2025-06-03 10:51:18,466 | INFO     | job summary report
[2025-06-03 12:57:10] 2025-06-03 10:51:18,466 | INFO     | --------------------------------------------------
[2025-06-03 12:57:10] 2025-06-03 10:51:18,466 | INFO     | PanDA job id: 6669238040
[2025-06-03 12:57:10] 2025-06-03 10:51:18,466 | INFO     | task id: 44871837
[2025-06-03 12:57:10] 2025-06-03 10:51:18,466 | INFO     | errors: (none)
[2025-06-03 12:57:10] 2025-06-03 10:51:18,467 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:57:10] 2025-06-03 10:51:18,467 | INFO     | pilot state: finished 
[2025-06-03 12:57:10] 2025-06-03 10:51:18,467 | INFO     | transexitcode: 0
[2025-06-03 12:57:10] 2025-06-03 10:51:18,467 | INFO     | exeerrorcode: 0
[2025-06-03 12:57:10] 2025-06-03 10:51:18,467 | INFO     | exeerrordiag: 
[2025-06-03 12:57:10] 2025-06-03 10:51:18,467 | INFO     | exitcode: 0
[2025-06-03 12:57:10] 2025-06-03 10:51:18,467 | INFO     | exitmsg: OK
[2025-06-03 12:57:10] 2025-06-03 10:51:18,467 | INFO     | cpuconsumptiontime: 47276 s
[2025-06-03 12:57:10] 2025-06-03 10:51:18,467 | INFO     | nevents: 400
[2025-06-03 12:57:10] 2025-06-03 10:51:18,467 | INFO     | neventsw: 0
[2025-06-03 12:57:10] 2025-06-03 10:51:18,467 | INFO     | pid: 354803
[2025-06-03 12:57:10] 2025-06-03 10:51:18,467 | INFO     | pgrp: 354803
[2025-06-03 12:57:10] 2025-06-03 10:51:18,468 | INFO     | corecount: 4
[2025-06-03 12:57:10] 2025-06-03 10:51:18,468 | INFO     | event service: False
[2025-06-03 12:57:10] 2025-06-03 10:51:18,468 | INFO     | sizes: {0: 2405018, 1: 2405273, 7: 2405479, 12: 2405507, 12433: 2435477, 12434: 2435476, 12435: 2444679, 12443: 2444793}
[2025-06-03 12:57:10] 2025-06-03 10:51:18,468 | INFO     | --------------------------------------------------
[2025-06-03 12:57:10] 2025-06-03 10:51:18,468 | INFO     | 
[2025-06-03 12:57:10] 2025-06-03 10:51:18,468 | INFO     | executing command: ls -lF /scratch/boinc/var/slot72/slots/0
[2025-06-03 12:57:10] 2025-06-03 10:51:18,493 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:57:10] 2025-06-03 10:51:18,494 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:57:10] 2025-06-03 10:51:18,494 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:57:10] 2025-06-03 10:51:18,494 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:57:10] 2025-06-03 10:51:18,494 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:57:10] 2025-06-03 10:51:18,494 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:57:10] 2025-06-03 10:51:18,494 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:57:10] 2025-06-03 10:51:18,494 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:57:10] 2025-06-03 10:51:18,494 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:57:10] 2025-06-03 10:51:18,494 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:57:10] 2025-06-03 10:51:18,494 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:57:10] 2025-06-03 10:51:18,494 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:57:10] 2025-06-03 10:51:18,495 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:57:10] 2025-06-03 10:51:18,495 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:57:10] 2025-06-03 10:51:18,495 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:57:10] 2025-06-03 10:51:18,495 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:57:10] 2025-06-03 10:51:18,495 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:57:10] 2025-06-03 10:51:18,495 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:57:10] 2025-06-03 10:51:18,495 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:57:10] 2025-06-03 10:51:18,495 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:57:10] 2025-06-03 10:51:18,495 | INFO     | job 6669238040 has completed (purged errors)
[2025-06-03 12:57:10] 2025-06-03 10:51:18,495 | INFO     | overall cleanup function is called
[2025-06-03 12:57:10] 2025-06-03 10:51:19,504 | INFO     | --- collectZombieJob: --- 10, [354803]
[2025-06-03 12:57:10] 2025-06-03 10:51:19,504 | INFO     | zombie collector waiting for pid 354803
[2025-06-03 12:57:10] 2025-06-03 10:51:19,504 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:57:10] 2025-06-03 10:51:19,504 | INFO     | collected zombie processes
[2025-06-03 12:57:10] 2025-06-03 10:51:19,505 | INFO     | will attempt to kill all subprocesses of pid=354803
[2025-06-03 12:57:10] 2025-06-03 10:51:20,408 | INFO     | process IDs to be killed: [354803] (in reverse order)
[2025-06-03 12:57:10] 2025-06-03 10:51:20,695 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:57:10] 2025-06-03 10:51:20,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:57:10] 2025-06-03 10:51:20,779 | INFO     | did not find any defunct processes belonging to 354803
[2025-06-03 12:57:10] 2025-06-03 10:51:20,856 | INFO     | did not find any defunct processes belonging to 354803
[2025-06-03 12:57:10] 2025-06-03 10:51:20,856 | INFO     | ready for new job
[2025-06-03 12:57:10] 2025-06-03 10:51:20,856 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:57:10] 2025-06-03 10:51:20,859 | INFO     | **************************************
[2025-06-03 12:57:10] 2025-06-03 10:51:20,859 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:57:10] 2025-06-03 10:51:20,859 | INFO     | **************************************
[2025-06-03 12:57:10] 2025-06-03 10:51:20,859 | INFO     | 
[2025-06-03 12:57:10] 2025-06-03 10:51:20,872 | INFO     | architecture information:
[2025-06-03 12:57:10] 2025-06-03 10:51:20,872 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:57:10] 2025-06-03 10:51:20,893 | INFO     | cat /etc/os-release:
[2025-06-03 12:57:10] NAME="CentOS Linux"
[2025-06-03 12:57:10] VERSION="7 (Core)"
[2025-06-03 12:57:10] ID="centos"
[2025-06-03 12:57:10] ID_LIKE="rhel fedora"
[2025-06-03 12:57:10] VERSION_ID="7"
[2025-06-03 12:57:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:57:10] ANSI_COLOR="0;31"
[2025-06-03 12:57:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:57:10] HOME_URL="https://www.centos.org/"
[2025-06-03 12:57:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:57:10] 
[2025-06-03 12:57:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:57:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:57:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:57:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:57:10] 
[2025-06-03 12:57:10] 2025-06-03 10:51:20,894 | INFO     | **************************************
[2025-06-03 12:57:10] 2025-06-03 10:51:21,277 | INFO     | PID=345806 has CPU usage=23.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 12:57:10] 2025-06-03 10:51:21,278 | INFO     | .. there are 16 such processes running
[2025-06-03 12:57:10] 2025-06-03 10:51:21,397 | INFO     | executing command: df -mP /scratch/boinc/var/slot72/slots/0
[2025-06-03 12:57:10] 2025-06-03 10:51:21,418 | INFO     | sufficient remaining disk space (3234869542912 B)
[2025-06-03 12:57:10] 2025-06-03 10:51:21,419 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:57:10] 2025-06-03 10:51:21,419 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:57:10] 2025-06-03 10:51:21,419 | INFO     | update_server=False
[2025-06-03 12:57:10] 2025-06-03 10:51:21,419 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:57:10] 2025-06-03 10:51:21,420 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:57:10] 2025-06-03 10:51:21,420 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:57:10] 2025-06-03 10:51:21,420 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 12:57:10] 2025-06-03 10:51:21,421 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:57:10] 2025-06-03 10:51:21,421 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:57:10] 2025-06-03 10:51:21,421 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:57:10] 2025-06-03 10:51:21,622 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:57:10] 2025-06-03 10:51:21,623 | INFO     | aborting loop
[2025-06-03 12:57:10] 2025-06-03 10:51:21,625 | INFO     | all payload control threads have been joined
[2025-06-03 12:57:10] 2025-06-03 10:51:22,012 | INFO     | all job control threads have been joined
[2025-06-03 12:57:10] 2025-06-03 10:51:22,323 | INFO     | all data control threads have been joined
[2025-06-03 12:57:10] 2025-06-03 10:51:22,426 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:57:10] 2025-06-03 10:51:22,522 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:57:10] 2025-06-03 10:51:22,589 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:57:10] 2025-06-03 10:51:22,628 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:57:10] 2025-06-03 10:51:22,630 | INFO     | [payload] control thread has finished
[2025-06-03 12:57:10] 2025-06-03 10:51:23,018 | INFO     | [job] control thread has finished
[2025-06-03 12:57:10] 2025-06-03 10:51:23,153 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:57:10] 2025-06-03 10:51:23,209 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:57:10] 2025-06-03 10:51:23,279 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:57:10] 2025-06-03 10:51:23,329 | INFO     | [data] control thread has finished
[2025-06-03 12:57:10] 2025-06-03 10:51:23,363 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:57:10] 2025-06-03 10:51:23,414 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:57:10] 2025-06-03 10:51:23,426 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:57:10] 2025-06-03 10:51:23,630 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:57:10] 2025-06-03 10:51:23,782 | INFO     | [job] validate thread has finished
[2025-06-03 12:57:10] 2025-06-03 10:51:24,370 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:57:10] 2025-06-03 10:51:25,426 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:57:10] 2025-06-03 10:51:27,107 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22733770458944)>', '<ExcThread(monitor, started 22733058467584)>']
[2025-06-03 12:57:10] 2025-06-03 10:51:27,451 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:57:10] 2025-06-03 10:51:27,451 | INFO     | [monitor] control thread has ended
[2025-06-03 12:57:10] 2025-06-03 10:51:32,132 | INFO     | all workflow threads have been joined
[2025-06-03 12:57:10] 2025-06-03 10:51:32,132 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:57:10] 2025-06-03 10:51:32,132 | INFO     | traces error code: 0
[2025-06-03 12:57:10] 2025-06-03 10:51:32,132 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:57:10] 2025-06-03 10:51:32,276 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:57:10] 2025-06-03 10:51:32,280 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:57:10] 2025-06-03 10:51:32,284 [wrapper] pilotpid: 345806
[2025-06-03 12:57:10] 2025-06-03 10:51:32,290 [wrapper] Pilot exit status: 0
[2025-06-03 12:57:10] 2025-06-03 10:51:32,308 [wrapper] pandaids: 6669238040
[2025-06-03 12:57:10] 2025-06-03 10:51:32,471 [wrapper] cleanup supervisor_pilot 1149497 345807
[2025-06-03 12:57:10] 2025-06-03 10:51:32,475 [wrapper] Test setup, not cleaning
[2025-06-03 12:57:10] 2025-06-03 10:51:32,479 [wrapper] apfmon messages muted
[2025-06-03 12:57:10] 2025-06-03 10:51:32,483 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:57:10] 2025-06-03 10:51:32,487 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:57:10]  *** Error codes and diagnostics ***
[2025-06-03 12:57:10]     "exeErrorCode": 0,
[2025-06-03 12:57:10]     "exeErrorDiag": "",
[2025-06-03 12:57:10]     "pilotErrorCode": 0,
[2025-06-03 12:57:10]     "pilotErrorDiag": "",
[2025-06-03 12:57:10]  *** Listing of results directory ***
[2025-06-03 12:57:10] total 425028
[2025-06-03 12:57:10] -rw-r--r-- 1 boinc boinc    495897 May 29 06:11 pilot3.tar.gz
[2025-06-03 12:57:10] -rw-r--r-- 1 boinc boinc      5111 May 29 06:40 queuedata.json
[2025-06-03 12:57:10] -rwx------ 1 boinc boinc     37140 May 29 06:40 runpilot2-wrapper.sh
[2025-06-03 12:57:10] -rw-r--r-- 1 boinc boinc       100 Jun  3 09:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:57:10] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 09:23 run_atlas
[2025-06-03 12:57:10] -rw-r--r-- 1 boinc boinc       105 Jun  3 09:23 job.xml
[2025-06-03 12:57:10] -rw-r--r-- 1 boinc boinc      6685 Jun  3 09:23 init_data.xml
[2025-06-03 12:57:10] -rw-r--r-- 2 boinc boinc 224716405 Jun  3 09:23 EVNT.44871834._003731.pool.root.1
[2025-06-03 12:57:10] -rw-r--r-- 2 boinc boinc     15093 Jun  3 09:23 start_atlas.sh
[2025-06-03 12:57:10] drwxrwx--x 2 boinc boinc      4096 Jun  3 09:23 shared
[2025-06-03 12:57:10] -rw-r--r-- 2 boinc boinc    508882 Jun  3 09:23 input.tar.gz
[2025-06-03 12:57:10] -rw-r--r-- 1 boinc boinc         0 Jun  3 09:23 boinc_lockfile
[2025-06-03 12:57:10] -rw-r--r-- 1 boinc boinc      2559 Jun  3 09:23 pandaJob.out
[2025-06-03 12:57:10] -rw------- 1 boinc boinc    986901 Jun  3 09:23 agis_schedconf.cvmfs.json
[2025-06-03 12:57:10] drwx------ 4 boinc boinc      4096 Jun  3 09:23 pilot3
[2025-06-03 12:57:10] -rw------- 1 boinc boinc        95 Jun  3 12:50 pilot_heartbeat.json
[2025-06-03 12:57:10] -rw------- 1 boinc boinc 203740635 Jun  3 12:50 HITS.44871837._095011.pool.root.1
[2025-06-03 12:57:10] -rw-r--r-- 1 boinc boinc       529 Jun  3 12:50 boinc_task_state.xml
[2025-06-03 12:57:10] -rw------- 1 boinc boinc      1031 Jun  3 12:51 memory_monitor_summary.json
[2025-06-03 12:57:10] -rw------- 1 boinc boinc   1603667 Jun  3 12:51 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:57:10] -rw------- 1 boinc boinc    316356 Jun  3 12:51 log.44871837._095011.job.log.tgz.1
[2025-06-03 12:57:10] -rw------- 1 boinc boinc      7703 Jun  3 12:51 heartbeat.json
[2025-06-03 12:57:10] -rw------- 1 boinc boinc      4882 Jun  3 12:51 pilotlog.txt
[2025-06-03 12:57:10] -rw------- 1 boinc boinc   1148639 Jun  3 12:51 log.44871837._095011.job.log.1
[2025-06-03 12:57:10] -rw------- 1 boinc boinc       357 Jun  3 12:51 output.list
[2025-06-03 12:57:10] -rw-r--r-- 1 boinc boinc       620 Jun  3 12:51 runtime_log
[2025-06-03 12:57:10] -rw------- 1 boinc boinc   1484800 Jun  3 12:51 result.tar.gz
[2025-06-03 12:57:10] -rw-r--r-- 1 boinc boinc      9026 Jun  3 12:51 runtime_log.err
[2025-06-03 12:57:10] -rw------- 1 boinc boinc       666 Jun  3 12:51 EFDNDmcFke7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHmdKDmeSPkgm.diag
[2025-06-03 12:57:10] -rw-r--r-- 1 boinc boinc        27 Jun  3 12:57 wrapper_checkpoint.txt
[2025-06-03 12:57:10] -rw-r--r-- 1 boinc boinc      8192 Jun  3 12:57 boinc_mmap_file
[2025-06-03 12:57:10] -rw-r--r-- 1 boinc boinc     20732 Jun  3 12:57 stderr.txt
[2025-06-03 12:57:10] HITS file was successfully produced:
[2025-06-03 12:57:10] -rw------- 1 boinc boinc 203740635 Jun  3 12:50 shared/HITS.pool.root.1
[2025-06-03 12:57:10]  *** Contents of shared directory: ***
[2025-06-03 12:57:10] total 420396
[2025-06-03 12:57:10] -rw-r--r-- 2 boinc boinc 224716405 Jun  3 09:23 ATLAS.root_0
[2025-06-03 12:57:10] -rw-r--r-- 2 boinc boinc     15093 Jun  3 09:23 start_atlas.sh
[2025-06-03 12:57:10] -rw-r--r-- 2 boinc boinc    508882 Jun  3 09:23 input.tar.gz
[2025-06-03 12:57:10] -rw------- 1 boinc boinc 203740635 Jun  3 12:50 HITS.pool.root.1
[2025-06-03 12:57:10] -rw------- 1 boinc boinc   1484800 Jun  3 12:51 result.tar.gz
12:57:12 (341489): run_atlas exited; CPU time 47992.884163
12:57:12 (341489): called boinc_finish(0)

</stderr_txt>
]]>

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