Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
06:10:43 (3113230): wrapper (7.7.26015): starting
06:10:43 (3113230): wrapper: running run_atlas (--nthreads 3)
[2025-05-30 06:10:43] Arguments: --nthreads 3
[2025-05-30 06:10:43] Threads: 3
[2025-05-30 06:10:43] Checking for CVMFS
[2025-05-30 06:10:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 06:10:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 06:10:43] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 06:10:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 06:10:43] 2.9.2.0 991936 8208 84224 146586 2 56 31847899 36864001 0 130560 0 5626161 99.991 1828898 3412 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-05-30 06:10:43] CVMFS is ok
[2025-05-30 06:10:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-30 06:10:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-30 06:10:43] Further information can be found at the LHC@home message board.
[2025-05-30 06:10:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 06:10:43] Checking for apptainer binary...
[2025-05-30 06:10:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-30 06:10:43] Running /usr/bin/apptainer --version
[2025-05-30 06:10:43] apptainer version 1.3.6-6.1
[2025-05-30 06:10:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 06:10:43] atlasA217a
[2025-05-30 06:10:43] apptainer works
[2025-05-30 06:10:43] Set ATHENA_PROC_NUMBER=3
[2025-05-30 06:10:43] Set ATHENA_CORE_NUMBER=3
[2025-05-30 06:10:43] Starting ATLAS job with PandaID=6669624243
[2025-05-30 06:10:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 07:59:11]  *** The last 200 lines of the pilot log: ***
[2025-05-30 07:59:11] 2025-05-30 05:58:51,928 | INFO     | executing command: lscpu
[2025-05-30 07:59:11] 2025-05-30 05:58:51,944 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-30 07:59:11] 2025-05-30 05:58:52,603 | WARNING  | process 3123367 can no longer be monitored (due to stat problems) - aborting
[2025-05-30 07:59:11] 2025-05-30 05:58:52,604 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6669624243/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 07:59:11] 2025-05-30 05:58:52,645 | INFO     | number of running child processes to parent process 3123367: 1
[2025-05-30 07:59:11] 2025-05-30 05:58:52,645 | INFO     | maximum number of monitored processes: 6
[2025-05-30 07:59:11] 2025-05-30 05:58:55,148 | INFO     | monitor loop #498: job 0:6669624243 is in state 'finished'
[2025-05-30 07:59:11] 2025-05-30 05:58:55,148 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-30 07:59:11] 2025-05-30 05:58:56,943 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-30 07:59:11] 2025-05-30 05:58:56,943 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6669624243/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 07:59:11] 2025-05-30 05:58:56,944 | INFO     | extracted standard info from prmon json
[2025-05-30 07:59:11] 2025-05-30 05:58:56,944 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 07:59:11] 2025-05-30 05:58:56,944 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 07:59:11] 2025-05-30 05:58:56,944 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 07:59:11] 2025-05-30 05:58:56,944 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 07:59:11] 2025-05-30 05:58:56,945 | INFO     | fitting pss+swap vs Time
[2025-05-30 07:59:11] 2025-05-30 05:58:56,945 | INFO     | sum of square deviations: 369281342.5
[2025-05-30 07:59:11] 2025-05-30 05:58:56,945 | INFO     | sum of deviations: 7139647430.499999
[2025-05-30 07:59:11] 2025-05-30 05:58:56,945 | INFO     | mean x: 1748581470.5
[2025-05-30 07:59:11] 2025-05-30 05:58:56,945 | INFO     | mean y: 2394686.4433962265
[2025-05-30 07:59:11] 2025-05-30 05:58:56,945 | INFO     | -- intersect: -33804499315.723076
[2025-05-30 07:59:11] 2025-05-30 05:58:56,945 | INFO     | intersect: -33804499315.723076
[2025-05-30 07:59:11] 2025-05-30 05:58:56,945 | INFO     | chi2: 1.452356916179997
[2025-05-30 07:59:11] 2025-05-30 05:58:56,945 | INFO     | sum of square deviations: 319447850.0
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | sum of deviations: 7608483639.999996
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | mean x: 1748581318.0
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | mean y: 2396122.108910891
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | -- intersect: -41644628114.280945
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | intersect: -41644628114.280945
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | chi2: 1.4531663368050733
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | current chi2=1.4531663368050733 (change=-0.05573152274478994 %)
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | right removable region: 100
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | sum of square deviations: 319447850.0
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | sum of deviations: -7271892533.0
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | mean x: 1748581623.0
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | mean y: 2437748.5445544557
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | -- intersect: 39807049511.10524
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | intersect: 39807049511.10524
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | chi2: 0.030482220345414285
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | current chi2=0.030482220345414285 (change=97.90118943864096 %)
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | sum of square deviations: 274312120.0
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | sum of deviations: -7188989141.0
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | mean x: 1748581775.5
[2025-05-30 07:59:11] 2025-05-30 05:58:56,946 | INFO     | mean y: 2437454.1666666665
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | -- intersect: 45828102744.56652
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | intersect: 45828102744.56652
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | chi2: 0.02653985956641353
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | current chi2=0.02653985956641353 (change=12.93331238448921 %)
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | left removable region: 20
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | sum of square deviations: 158737860.0
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | sum of deviations: -5348154992.0
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | mean x: 1748581897.5
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | mean y: 2439763.75
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | -- intersect: 58915209559.40843
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | intersect: 58915209559.40843
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | chi2: 0.021347046048251384
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | -- intersect: 58915209559.40843
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | current memory leak: -33.69 B/s (using 80 data points, chi2=0.02)
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | ..............................
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | . Timing measurements:
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | . get job = 0 s
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | . initial setup = 1 s
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | . payload setup = 3 s
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | . stage-in = 0 s
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | . payload execution = 6459 s
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | . stage-out = 0 s
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | . log creation = 0 s
[2025-05-30 07:59:11] 2025-05-30 05:58:56,947 | INFO     | ..............................
[2025-05-30 07:59:11] 2025-05-30 05:58:57,063 | INFO     | 
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | job summary report
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | --------------------------------------------------
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | PanDA job id: 6669624243
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | task id: 44871837
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | errors: (none)
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | pilot state: finished 
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | transexitcode: 0
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | exeerrorcode: 0
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | exeerrordiag: 
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | exitcode: 0
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | exitmsg: OK
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | cpuconsumptiontime: 18715 s
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | nevents: 400
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | neventsw: 0
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | pid: 3123367
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | pgrp: 3123367
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | corecount: 3
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | event service: False
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | sizes: {0: 2405235, 2: 2405441, 10: 2405469, 6466: 2432571, 6467: 2441518, 6468: 2441574, 6475: 2441872}
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | --------------------------------------------------
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | 
[2025-05-30 07:59:11] 2025-05-30 05:58:57,064 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-05-30 07:59:11] 2025-05-30 05:58:57,079 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 07:59:11] 2025-05-30 05:58:57,079 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 07:59:11] 2025-05-30 05:58:57,079 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 07:59:11] 2025-05-30 05:58:57,079 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 07:59:11] 2025-05-30 05:58:57,079 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 07:59:11] 2025-05-30 05:58:57,079 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 07:59:11] 2025-05-30 05:58:57,079 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 07:59:11] 2025-05-30 05:58:57,079 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 07:59:11] 2025-05-30 05:58:57,079 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 07:59:11] 2025-05-30 05:58:57,079 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 07:59:11] 2025-05-30 05:58:57,079 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 07:59:11] 2025-05-30 05:58:57,079 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 07:59:11] 2025-05-30 05:58:57,079 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 07:59:11] 2025-05-30 05:58:57,080 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 07:59:11] 2025-05-30 05:58:57,080 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 07:59:11] 2025-05-30 05:58:57,080 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 07:59:11] 2025-05-30 05:58:57,080 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 07:59:11] 2025-05-30 05:58:57,080 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 07:59:11] 2025-05-30 05:58:57,080 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 07:59:11] 2025-05-30 05:58:57,080 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 07:59:11] 2025-05-30 05:58:57,080 | INFO     | job 6669624243 has completed (purged errors)
[2025-05-30 07:59:11] 2025-05-30 05:58:57,080 | INFO     | overall cleanup function is called
[2025-05-30 07:59:11] 2025-05-30 05:58:58,086 | INFO     | --- collectZombieJob: --- 10, [3123367]
[2025-05-30 07:59:11] 2025-05-30 05:58:58,087 | INFO     | zombie collector waiting for pid 3123367
[2025-05-30 07:59:11] 2025-05-30 05:58:58,087 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 07:59:11] 2025-05-30 05:58:58,087 | INFO     | collected zombie processes
[2025-05-30 07:59:11] 2025-05-30 05:58:58,087 | INFO     | will attempt to kill all subprocesses of pid=3123367
[2025-05-30 07:59:11] 2025-05-30 05:58:58,128 | INFO     | process IDs to be killed: [3123367] (in reverse order)
[2025-05-30 07:59:11] 2025-05-30 05:58:58,151 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 07:59:11] 2025-05-30 05:58:58,151 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 07:59:11] 2025-05-30 05:58:58,152 | INFO     | did not find any defunct processes belonging to 3123367
[2025-05-30 07:59:11] 2025-05-30 05:58:58,153 | INFO     | did not find any defunct processes belonging to 3123367
[2025-05-30 07:59:11] 2025-05-30 05:58:58,153 | INFO     | ready for new job
[2025-05-30 07:59:11] 2025-05-30 05:58:58,153 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 07:59:11] 2025-05-30 05:58:58,154 | INFO     | **************************************
[2025-05-30 07:59:11] 2025-05-30 05:58:58,154 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 07:59:11] 2025-05-30 05:58:58,154 | INFO     | **************************************
[2025-05-30 07:59:11] 2025-05-30 05:58:58,154 | INFO     | 
[2025-05-30 07:59:11] 2025-05-30 05:58:58,155 | INFO     | architecture information:
[2025-05-30 07:59:11] 2025-05-30 05:58:58,155 | INFO     | executing command: cat /etc/os-release
[2025-05-30 07:59:11] 2025-05-30 05:58:58,163 | INFO     | cat /etc/os-release:
[2025-05-30 07:59:11] NAME="CentOS Linux"
[2025-05-30 07:59:11] VERSION="7 (Core)"
[2025-05-30 07:59:11] ID="centos"
[2025-05-30 07:59:11] ID_LIKE="rhel fedora"
[2025-05-30 07:59:11] VERSION_ID="7"
[2025-05-30 07:59:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 07:59:11] ANSI_COLOR="0;31"
[2025-05-30 07:59:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 07:59:11] HOME_URL="https://www.centos.org/"
[2025-05-30 07:59:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 07:59:11] 
[2025-05-30 07:59:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 07:59:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 07:59:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 07:59:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 07:59:11] 
[2025-05-30 07:59:11] 2025-05-30 05:58:58,164 | INFO     | **************************************
[2025-05-30 07:59:11] 2025-05-30 05:58:58,667 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-05-30 07:59:11] 2025-05-30 05:58:58,680 | INFO     | sufficient remaining disk space (324574117888 B)
[2025-05-30 07:59:11] 2025-05-30 05:58:58,681 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 07:59:11] 2025-05-30 05:58:58,681 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 07:59:11] 2025-05-30 05:58:58,681 | INFO     | update_server=False
[2025-05-30 07:59:11] 2025-05-30 05:58:58,681 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 07:59:11] 2025-05-30 05:58:58,681 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 07:59:11] 2025-05-30 05:58:58,681 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 07:59:11] 2025-05-30 05:58:58,681 | INFO     | aborting loop
[2025-05-30 07:59:11] 2025-05-30 05:58:58,832 | INFO     | all job control threads have been joined
[2025-05-30 07:59:11] 2025-05-30 05:58:59,028 | INFO     | all payload control threads have been joined
[2025-05-30 07:59:11] 2025-05-30 05:58:59,632 | INFO     | all data control threads have been joined
[2025-05-30 07:59:11] 2025-05-30 05:58:59,658 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 07:59:11] 2025-05-30 05:58:59,659 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 07:59:11] 2025-05-30 05:58:59,659 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 07:59:11] 2025-05-30 05:58:59,686 | INFO     | [job] retrieve thread has finished
[2025-05-30 07:59:11] 2025-05-30 05:58:59,687 | INFO     | [job] queue monitor thread has finished
[2025-05-30 07:59:11] 2025-05-30 05:58:59,687 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 07:59:11] 2025-05-30 05:58:59,687 | INFO     | [job] job monitor thread has finished
[2025-05-30 07:59:11] 2025-05-30 05:58:59,837 | INFO     | [job] control thread has finished
[2025-05-30 07:59:11] 2025-05-30 05:59:00,034 | INFO     | [payload] control thread has finished
[2025-05-30 07:59:11] 2025-05-30 05:59:00,097 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 07:59:11] 2025-05-30 05:59:00,213 | INFO     | [payload] failed_post thread has finished
[2025-05-30 07:59:11] 2025-05-30 05:59:00,339 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 07:59:11] 2025-05-30 05:59:00,637 | INFO     | [data] control thread has finished
[2025-05-30 07:59:11] 2025-05-30 05:59:00,639 | INFO     | [data] copytool_in thread has finished
[2025-05-30 07:59:11] 2025-05-30 05:59:00,781 | INFO     | [payload] validate_post thread has finished
[2025-05-30 07:59:11] 2025-05-30 05:59:01,018 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 07:59:11] 2025-05-30 05:59:01,071 | INFO     | [job] validate thread has finished
[2025-05-30 07:59:11] 2025-05-30 05:59:01,137 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 07:59:11] 2025-05-30 05:59:01,141 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 07:59:11] 2025-05-30 05:59:02,104 | INFO     | [data] copytool_out thread has finished
[2025-05-30 07:59:11] 2025-05-30 05:59:05,025 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 07:59:11] 2025-05-30 05:59:06,567 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140586637342528)>', '<ExcThread(monitor, started 140586015254272)>']
[2025-05-30 07:59:11] 2025-05-30 05:59:06,696 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 07:59:11] 2025-05-30 05:59:06,696 | INFO     | [monitor] control thread has ended
[2025-05-30 07:59:11] 2025-05-30 05:59:11,593 | INFO     | all workflow threads have been joined
[2025-05-30 07:59:11] 2025-05-30 05:59:11,594 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 07:59:11] 2025-05-30 05:59:11,595 | INFO     | traces error code: 0
[2025-05-30 07:59:11] 2025-05-30 05:59:11,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 07:59:11] 2025-05-30 05:59:11,646 [wrapper] ==== pilot stdout END ====
[2025-05-30 07:59:11] 2025-05-30 05:59:11,648 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 07:59:11] 2025-05-30 05:59:11,650 [wrapper] pilotpid: 3116876
[2025-05-30 07:59:11] 2025-05-30 05:59:11,653 [wrapper] Pilot exit status: 0
[2025-05-30 07:59:11] 2025-05-30 05:59:11,660 [wrapper] pandaids: 6669624243
[2025-05-30 07:59:11] 2025-05-30 05:59:11,675 [wrapper] cleanup supervisor_pilot 3137997 3116877
[2025-05-30 07:59:11] 2025-05-30 05:59:11,678 [wrapper] Test setup, not cleaning
[2025-05-30 07:59:11] 2025-05-30 05:59:11,680 [wrapper] apfmon messages muted
[2025-05-30 07:59:11] 2025-05-30 05:59:11,683 [wrapper] ==== wrapper stdout END ====
[2025-05-30 07:59:11] 2025-05-30 05:59:11,685 [wrapper] ==== wrapper stderr END ====
[2025-05-30 07:59:11]  *** Error codes and diagnostics ***
[2025-05-30 07:59:11]     "exeErrorCode": 0,
[2025-05-30 07:59:11]     "exeErrorDiag": "",
[2025-05-30 07:59:11]     "pilotErrorCode": 0,
[2025-05-30 07:59:11]     "pilotErrorDiag": "",
[2025-05-30 07:59:11]  *** Listing of results directory ***
[2025-05-30 07:59:11] total 421156
[2025-05-30 07:59:11] -rw-r--r-- 1 boinc boinc    495897 May 29 11:08 pilot3.tar.gz
[2025-05-30 07:59:11] -rw-r--r-- 1 boinc boinc      5111 May 29 11:17 queuedata.json
[2025-05-30 07:59:11] -rwx------ 1 boinc boinc     37140 May 29 11:20 runpilot2-wrapper.sh
[2025-05-30 07:59:11] -rw-r--r-- 1 boinc boinc       100 May 30 06:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 07:59:11] -rwxr-xr-x 1 boinc boinc      7986 May 30 06:10 run_atlas
[2025-05-30 07:59:11] -rw-r--r-- 1 boinc boinc       105 May 30 06:10 job.xml
[2025-05-30 07:59:11] -rw-r--r-- 2 boinc boinc 223454868 May 30 06:10 EVNT.44871834._003729.pool.root.1
[2025-05-30 07:59:11] -rw-r--r-- 1 boinc boinc      6925 May 30 06:10 init_data.xml
[2025-05-30 07:59:11] drwxrwx--x 2 boinc boinc      4096 May 30 06:10 shared
[2025-05-30 07:59:11] -rw-r--r-- 2 boinc boinc    508876 May 30 06:10 input.tar.gz
[2025-05-30 07:59:11] -rw-r--r-- 2 boinc boinc     15093 May 30 06:10 start_atlas.sh
[2025-05-30 07:59:11] -rw-r--r-- 1 boinc boinc         0 May 30 06:10 boinc_lockfile
[2025-05-30 07:59:11] -rw-r--r-- 1 boinc boinc      2558 May 30 06:10 pandaJob.out
[2025-05-30 07:59:11] -rw------- 1 boinc boinc    992366 May 30 06:10 agis_schedconf.cvmfs.json
[2025-05-30 07:59:11] -rw------- 1 boinc boinc   1603667 May 30 06:10 agis_ddmendpoints.agis.ALL.json
[2025-05-30 07:59:11] drwx------ 4 boinc boinc      4096 May 30 06:10 pilot3
[2025-05-30 07:59:11] -rw------- 1 boinc boinc        95 May 30 07:58 pilot_heartbeat.json
[2025-05-30 07:59:11] -rw------- 1 boinc boinc 202262583 May 30 07:58 HITS.44871837._098079.pool.root.1
[2025-05-30 07:59:11] -rw-r--r-- 1 boinc boinc       529 May 30 07:58 boinc_task_state.xml
[2025-05-30 07:59:11] -rw------- 1 boinc boinc      1016 May 30 07:58 memory_monitor_summary.json
[2025-05-30 07:59:11] -rw------- 1 boinc boinc    230732 May 30 07:58 log.44871837._098079.job.log.tgz.1
[2025-05-30 07:59:11] -rw------- 1 boinc boinc      7663 May 30 07:58 heartbeat.json
[2025-05-30 07:59:11] -rw-r--r-- 1 boinc boinc      8192 May 30 07:58 boinc_mmap_file
[2025-05-30 07:59:11] -rw-r--r-- 1 boinc boinc        27 May 30 07:58 wrapper_checkpoint.txt
[2025-05-30 07:59:11] -rw------- 1 boinc boinc      4357 May 30 07:59 pilotlog.txt
[2025-05-30 07:59:11] -rw------- 1 boinc boinc    617432 May 30 07:59 log.44871837._098079.job.log.1
[2025-05-30 07:59:11] -rw------- 1 boinc boinc       357 May 30 07:59 output.list
[2025-05-30 07:59:11] -rw-r--r-- 1 boinc boinc       620 May 30 07:59 runtime_log
[2025-05-30 07:59:11] -rw------- 1 boinc boinc    870400 May 30 07:59 result.tar.gz
[2025-05-30 07:59:11] -rw-r--r-- 1 boinc boinc      8753 May 30 07:59 runtime_log.err
[2025-05-30 07:59:11] -rw------- 1 boinc boinc       663 May 30 07:59 f1qKDmNcoe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbEeKDmqztDsn.diag
[2025-05-30 07:59:11] -rw-r--r-- 1 boinc boinc     21120 May 30 07:59 stderr.txt
[2025-05-30 07:59:11] HITS file was successfully produced:
[2025-05-30 07:59:11] -rw------- 1 boinc boinc 202262583 May 30 07:58 shared/HITS.pool.root.1
[2025-05-30 07:59:11]  *** Contents of shared directory: ***
[2025-05-30 07:59:11] total 417120
[2025-05-30 07:59:11] -rw-r--r-- 2 boinc boinc 223454868 May 30 06:10 ATLAS.root_0
[2025-05-30 07:59:11] -rw-r--r-- 2 boinc boinc    508876 May 30 06:10 input.tar.gz
[2025-05-30 07:59:11] -rw-r--r-- 2 boinc boinc     15093 May 30 06:10 start_atlas.sh
[2025-05-30 07:59:11] -rw------- 1 boinc boinc 202262583 May 30 07:58 HITS.pool.root.1
[2025-05-30 07:59:11] -rw------- 1 boinc boinc    870400 May 30 07:59 result.tar.gz
07:59:13 (3113230): run_atlas exited; CPU time 18735.971828
07:59:13 (3113230): called boinc_finish(0)

</stderr_txt>
]]>

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