Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:23:27 (1726311): wrapper (7.7.26015): starting
11:23:27 (1726311): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 11:23:27] Arguments: --nthreads 4
[2025-06-05 11:23:27] Threads: 4
[2025-06-05 11:23:27] Checking for CVMFS
[2025-06-05 11:23:27] No cvmfs_config command found, will try listing directly
[2025-06-05 11:23:27] CVMFS is ok
[2025-06-05 11:23:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 11:23:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 11:23:27] Further information can be found at the LHC@home message board.
[2025-06-05 11:23:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 11:23:27] Checking for apptainer binary...
[2025-06-05 11:23:27] which: no apptainer in ((null))
[2025-06-05 11:23:27] apptainer is not installed, using version from CVMFS
[2025-06-05 11:23:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 11:23:27] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-06-05 11:23:27] apptainer works
[2025-06-05 11:23:27] Set ATHENA_PROC_NUMBER=4
[2025-06-05 11:23:27] Set ATHENA_CORE_NUMBER=4
[2025-06-05 11:23:27] Starting ATLAS job with PandaID=6669512200
[2025-06-05 11:23:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 15:13:22]  *** The last 200 lines of the pilot log: ***
[2025-06-05 15:13:22] 2025-06-05 13:12:38,467 | INFO     | executing command: lscpu
[2025-06-05 15:13:22] 2025-06-05 13:12:38,534 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 15:13:22] 2025-06-05 13:12:39,228 | INFO     | monitor loop #1000: job 0:6669512200 is in state 'finished'
[2025-06-05 15:13:22] 2025-06-05 13:12:39,228 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 15:13:22] 2025-06-05 13:12:41,731 | INFO     | monitor loop #1001: job 0:6669512200 is in state 'finished'
[2025-06-05 15:13:22] 2025-06-05 13:12:41,732 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 15:13:22] 2025-06-05 13:12:42,925 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 15:13:22] 2025-06-05 13:12:42,925 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6669512200/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 15:13:22] 2025-06-05 13:12:42,926 | INFO     | extracted standard info from prmon json
[2025-06-05 15:13:22] 2025-06-05 13:12:42,927 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 15:13:22] 2025-06-05 13:12:42,927 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 15:13:22] 2025-06-05 13:12:42,927 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 15:13:22] 2025-06-05 13:12:42,927 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 15:13:22] 2025-06-05 13:12:42,932 | INFO     | fitting pss+swap vs Time
[2025-06-05 15:13:22] 2025-06-05 13:12:42,933 | INFO     | sum of square deviations: 3531973200.0
[2025-06-05 15:13:22] 2025-06-05 13:12:42,934 | INFO     | sum of deviations: 19179266749.00001
[2025-06-05 15:13:22] 2025-06-05 13:12:42,934 | INFO     | mean x: 1749122278.0
[2025-06-05 15:13:22] 2025-06-05 13:12:42,934 | INFO     | mean y: 2326999.4355555554
[2025-06-05 15:13:22] 2025-06-05 13:12:42,935 | INFO     | -- intersect: -9495729992.157856
[2025-06-05 15:13:22] 2025-06-05 13:12:42,935 | INFO     | intersect: -9495729992.157856
[2025-06-05 15:13:22] 2025-06-05 13:12:42,935 | INFO     | chi2: 1.6843985694433432
[2025-06-05 15:13:22] 2025-06-05 13:12:42,935 | INFO     | sum of square deviations: 3301699115.0
[2025-06-05 15:13:22] 2025-06-05 13:12:42,937 | INFO     | sum of deviations: 18916657997.499996
[2025-06-05 15:13:22] 2025-06-05 13:12:42,937 | INFO     | mean x: 1749122125.5
[2025-06-05 15:13:22] 2025-06-05 13:12:42,937 | INFO     | mean y: 2326825.4318181816
[2025-06-05 15:13:22] 2025-06-05 13:12:42,937 | INFO     | -- intersect: -10019042139.905827
[2025-06-05 15:13:22] 2025-06-05 13:12:42,937 | INFO     | intersect: -10019042139.905827
[2025-06-05 15:13:22] 2025-06-05 13:12:42,938 | INFO     | chi2: 1.6854161870284428
[2025-06-05 15:13:22] 2025-06-05 13:12:42,938 | INFO     | current chi2=1.6854161870284428 (change=-0.06041429882215174 %)
[2025-06-05 15:13:22] 2025-06-05 13:12:42,938 | INFO     | right removable region: 219
[2025-06-05 15:13:22] 2025-06-05 13:12:42,938 | INFO     | sum of square deviations: 3301699115.0
[2025-06-05 15:13:22] 2025-06-05 13:12:42,940 | INFO     | sum of deviations: -18100266632.499996
[2025-06-05 15:13:22] 2025-06-05 13:12:42,940 | INFO     | mean x: 1749122430.5
[2025-06-05 15:13:22] 2025-06-05 13:12:42,940 | INFO     | mean y: 2351488.6772727272
[2025-06-05 15:13:22] 2025-06-05 13:12:42,940 | INFO     | -- intersect: 9591227174.26089
[2025-06-05 15:13:22] 2025-06-05 13:12:42,940 | INFO     | intersect: 9591227174.26089
[2025-06-05 15:13:22] 2025-06-05 13:12:42,940 | INFO     | chi2: 0.036580584778925056
[2025-06-05 15:13:22] 2025-06-05 13:12:42,940 | INFO     | current chi2=0.036580584778925056 (change=97.8282702536957 %)
[2025-06-05 15:13:22] 2025-06-05 13:12:42,941 | INFO     | sum of square deviations: 3081657780.0
[2025-06-05 15:13:22] 2025-06-05 13:12:42,942 | INFO     | sum of deviations: -18107179121.999996
[2025-06-05 15:13:22] 2025-06-05 13:12:42,942 | INFO     | mean x: 1749122583.0
[2025-06-05 15:13:22] 2025-06-05 13:12:42,942 | INFO     | mean y: 2351474.3860465116
[2025-06-05 15:13:22] 2025-06-05 13:12:42,942 | INFO     | -- intersect: 10279831382.202517
[2025-06-05 15:13:22] 2025-06-05 13:12:42,943 | INFO     | intersect: 10279831382.202517
[2025-06-05 15:13:22] 2025-06-05 13:12:42,943 | INFO     | chi2: 0.031009825085346
[2025-06-05 15:13:22] 2025-06-05 13:12:42,943 | INFO     | current chi2=0.031009825085346 (change=15.22873329457681 %)
[2025-06-05 15:13:22] 2025-06-05 13:12:42,943 | INFO     | left removable region: 20
[2025-06-05 15:13:22] 2025-06-05 13:12:42,943 | INFO     | sum of square deviations: 2443580700.0
[2025-06-05 15:13:22] 2025-06-05 13:12:42,945 | INFO     | sum of deviations: -12289485902.0
[2025-06-05 15:13:22] 2025-06-05 13:12:42,945 | INFO     | mean x: 1749122705.0
[2025-06-05 15:13:22] 2025-06-05 13:12:42,945 | INFO     | mean y: 2347875.472361809
[2025-06-05 15:13:22] 2025-06-05 13:12:42,945 | INFO     | -- intersect: 8799200307.62883
[2025-06-05 15:13:22] 2025-06-05 13:12:42,945 | INFO     | intersect: 8799200307.62883
[2025-06-05 15:13:22] 2025-06-05 13:12:42,945 | INFO     | chi2: 0.026384289941118997
[2025-06-05 15:13:22] 2025-06-05 13:12:42,945 | INFO     | -- intersect: 8799200307.62883
[2025-06-05 15:13:22] 2025-06-05 13:12:42,945 | INFO     | current memory leak: -5.03 B/s (using 199 data points, chi2=0.03)
[2025-06-05 15:13:22] 2025-06-05 13:12:42,946 | INFO     | ..............................
[2025-06-05 15:13:22] 2025-06-05 13:12:42,946 | INFO     | . Timing measurements:
[2025-06-05 15:13:22] 2025-06-05 13:12:42,946 | INFO     | . get job = 0 s
[2025-06-05 15:13:22] 2025-06-05 13:12:42,947 | INFO     | . initial setup = 1 s
[2025-06-05 15:13:22] 2025-06-05 13:12:42,947 | INFO     | . payload setup = 7 s
[2025-06-05 15:13:22] 2025-06-05 13:12:42,947 | INFO     | . stage-in = 0 s
[2025-06-05 15:13:22] 2025-06-05 13:12:42,947 | INFO     | . payload execution = 13711 s
[2025-06-05 15:13:22] 2025-06-05 13:12:42,947 | INFO     | . stage-out = 1 s
[2025-06-05 15:13:22] 2025-06-05 13:12:42,947 | INFO     | . log creation = 0 s
[2025-06-05 15:13:22] 2025-06-05 13:12:42,947 | INFO     | ..............................
[2025-06-05 15:13:22] 2025-06-05 13:12:43,047 | INFO     | 
[2025-06-05 15:13:22] 2025-06-05 13:12:43,047 | INFO     | job summary report
[2025-06-05 15:13:22] 2025-06-05 13:12:43,047 | INFO     | --------------------------------------------------
[2025-06-05 15:13:22] 2025-06-05 13:12:43,047 | INFO     | PanDA job id: 6669512200
[2025-06-05 15:13:22] 2025-06-05 13:12:43,047 | INFO     | task id: 44871837
[2025-06-05 15:13:22] 2025-06-05 13:12:43,047 | INFO     | errors: (none)
[2025-06-05 15:13:22] 2025-06-05 13:12:43,047 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 15:13:22] 2025-06-05 13:12:43,047 | INFO     | pilot state: finished 
[2025-06-05 15:13:22] 2025-06-05 13:12:43,048 | INFO     | transexitcode: 0
[2025-06-05 15:13:22] 2025-06-05 13:12:43,048 | INFO     | exeerrorcode: 0
[2025-06-05 15:13:22] 2025-06-05 13:12:43,048 | INFO     | exeerrordiag: 
[2025-06-05 15:13:22] 2025-06-05 13:12:43,048 | INFO     | exitcode: 0
[2025-06-05 15:13:22] 2025-06-05 13:12:43,048 | INFO     | exitmsg: OK
[2025-06-05 15:13:22] 2025-06-05 13:12:43,048 | INFO     | cpuconsumptiontime: 52991 s
[2025-06-05 15:13:22] 2025-06-05 13:12:43,048 | INFO     | nevents: 400
[2025-06-05 15:13:22] 2025-06-05 13:12:43,048 | INFO     | neventsw: 0
[2025-06-05 15:13:22] 2025-06-05 13:12:43,048 | INFO     | pid: 1737339
[2025-06-05 15:13:22] 2025-06-05 13:12:43,048 | INFO     | pgrp: 1737339
[2025-06-05 15:13:22] 2025-06-05 13:12:43,048 | INFO     | corecount: 4
[2025-06-05 15:13:22] 2025-06-05 13:12:43,049 | INFO     | event service: False
[2025-06-05 15:13:22] 2025-06-05 13:12:43,049 | INFO     | sizes: {0: 2397232, 1: 2397431, 5: 2397637, 12: 2397693, 13722: 2427630, 13723: 2436593, 13725: 2436777, 13729: 2436947}
[2025-06-05 15:13:22] 2025-06-05 13:12:43,049 | INFO     | --------------------------------------------------
[2025-06-05 15:13:22] 2025-06-05 13:12:43,049 | INFO     | 
[2025-06-05 15:13:22] 2025-06-05 13:12:43,049 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-06-05 15:13:22] 2025-06-05 13:12:43,070 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 15:13:22] 2025-06-05 13:12:43,070 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 15:13:22] 2025-06-05 13:12:43,070 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 15:13:22] 2025-06-05 13:12:43,070 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 15:13:22] 2025-06-05 13:12:43,070 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 15:13:22] 2025-06-05 13:12:43,071 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 15:13:22] 2025-06-05 13:12:43,071 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 15:13:22] 2025-06-05 13:12:43,071 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 15:13:22] 2025-06-05 13:12:43,071 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 15:13:22] 2025-06-05 13:12:43,071 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 15:13:22] 2025-06-05 13:12:43,071 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 15:13:22] 2025-06-05 13:12:43,071 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 15:13:22] 2025-06-05 13:12:43,071 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 15:13:22] 2025-06-05 13:12:43,071 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 15:13:22] 2025-06-05 13:12:43,071 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 15:13:22] 2025-06-05 13:12:43,071 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 15:13:22] 2025-06-05 13:12:43,071 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 15:13:22] 2025-06-05 13:12:43,072 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 15:13:22] 2025-06-05 13:12:43,072 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 15:13:22] 2025-06-05 13:12:43,072 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 15:13:22] 2025-06-05 13:12:43,072 | INFO     | job 6669512200 has completed (purged errors)
[2025-06-05 15:13:22] 2025-06-05 13:12:43,072 | INFO     | overall cleanup function is called
[2025-06-05 15:13:22] 2025-06-05 13:12:44,081 | INFO     | --- collectZombieJob: --- 10, [1737339]
[2025-06-05 15:13:22] 2025-06-05 13:12:44,081 | INFO     | zombie collector waiting for pid 1737339
[2025-06-05 15:13:22] 2025-06-05 13:12:44,081 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 15:13:22] 2025-06-05 13:12:44,081 | INFO     | collected zombie processes
[2025-06-05 15:13:22] 2025-06-05 13:12:44,081 | INFO     | will attempt to kill all subprocesses of pid=1737339
[2025-06-05 15:13:22] 2025-06-05 13:12:44,433 | INFO     | process IDs to be killed: [1737339] (in reverse order)
[2025-06-05 15:13:22] 2025-06-05 13:12:44,539 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 15:13:22] 2025-06-05 13:12:44,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 15:13:22] 2025-06-05 13:12:44,552 | INFO     | did not find any defunct processes belonging to 1737339
[2025-06-05 15:13:22] 2025-06-05 13:12:44,564 | INFO     | did not find any defunct processes belonging to 1737339
[2025-06-05 15:13:22] 2025-06-05 13:12:44,565 | INFO     | ready for new job
[2025-06-05 15:13:22] 2025-06-05 13:12:44,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 15:13:22] 2025-06-05 13:12:44,568 | INFO     | **************************************
[2025-06-05 15:13:22] 2025-06-05 13:12:44,568 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 15:13:22] 2025-06-05 13:12:44,568 | INFO     | **************************************
[2025-06-05 15:13:22] 2025-06-05 13:12:44,568 | INFO     | 
[2025-06-05 15:13:22] 2025-06-05 13:12:44,572 | INFO     | architecture information:
[2025-06-05 15:13:22] 2025-06-05 13:12:44,572 | INFO     | executing command: cat /etc/os-release
[2025-06-05 15:13:22] 2025-06-05 13:12:44,589 | INFO     | cat /etc/os-release:
[2025-06-05 15:13:22] NAME="CentOS Linux"
[2025-06-05 15:13:22] VERSION="7 (Core)"
[2025-06-05 15:13:22] ID="centos"
[2025-06-05 15:13:22] ID_LIKE="rhel fedora"
[2025-06-05 15:13:22] VERSION_ID="7"
[2025-06-05 15:13:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 15:13:22] ANSI_COLOR="0;31"
[2025-06-05 15:13:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 15:13:22] HOME_URL="https://www.centos.org/"
[2025-06-05 15:13:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 15:13:22] 
[2025-06-05 15:13:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 15:13:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 15:13:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 15:13:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 15:13:22] 
[2025-06-05 15:13:22] 2025-06-05 13:12:44,590 | INFO     | **************************************
[2025-06-05 15:13:22] 2025-06-05 13:12:45,093 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-06-05 15:13:22] 2025-06-05 13:12:45,112 | INFO     | sufficient remaining disk space (661984903168 B)
[2025-06-05 15:13:22] 2025-06-05 13:12:45,112 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 15:13:22] 2025-06-05 13:12:45,112 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 15:13:22] 2025-06-05 13:12:45,112 | INFO     | update_server=False
[2025-06-05 15:13:22] 2025-06-05 13:12:45,112 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 15:13:22] 2025-06-05 13:12:45,113 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 15:13:22] 2025-06-05 13:12:45,113 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 15:13:22] 2025-06-05 13:12:45,240 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:13:22] 2025-06-05 13:12:45,240 | INFO     | aborting loop
[2025-06-05 15:13:22] 2025-06-05 13:12:45,298 | INFO     | all data control threads have been joined
[2025-06-05 15:13:22] 2025-06-05 13:12:45,710 | INFO     | all payload control threads have been joined
[2025-06-05 15:13:22] 2025-06-05 13:12:45,972 | INFO     | PID=1730037 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 15:13:22] 2025-06-05 13:12:45,972 | INFO     | .. there are 7 such processes running
[2025-06-05 15:13:22] 2025-06-05 13:12:45,972 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 15:13:22] 2025-06-05 13:12:45,972 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 15:13:22] 2025-06-05 13:12:45,972 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 15:13:22] 2025-06-05 13:12:46,118 | INFO     | [job] retrieve thread has finished
[2025-06-05 15:13:22] 2025-06-05 13:12:46,213 | INFO     | all job control threads have been joined
[2025-06-05 15:13:22] 2025-06-05 13:12:46,246 | INFO     | [job] job monitor thread has finished
[2025-06-05 15:13:22] 2025-06-05 13:12:46,303 | INFO     | [data] control thread has finished
[2025-06-05 15:13:22] 2025-06-05 13:12:46,379 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 15:13:22] 2025-06-05 13:12:46,460 | INFO     | [payload] validate_post thread has finished
[2025-06-05 15:13:22] 2025-06-05 13:12:46,522 | INFO     | [payload] failed_post thread has finished
[2025-06-05 15:13:22] 2025-06-05 13:12:46,692 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 15:13:22] 2025-06-05 13:12:46,716 | INFO     | [payload] control thread has finished
[2025-06-05 15:13:22] 2025-06-05 13:12:46,770 | INFO     | [data] copytool_in thread has finished
[2025-06-05 15:13:22] 2025-06-05 13:12:47,119 | INFO     | [data] copytool_out thread has finished
[2025-06-05 15:13:22] 2025-06-05 13:12:47,219 | INFO     | [job] control thread has finished
[2025-06-05 15:13:22] 2025-06-05 13:12:47,254 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 15:13:22] 2025-06-05 13:12:47,549 | INFO     | [job] validate thread has finished
[2025-06-05 15:13:22] 2025-06-05 13:12:47,556 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 15:13:22] 2025-06-05 13:12:48,057 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:13:22] 2025-06-05 13:12:49,063 | INFO     | [job] queue monitor thread has finished
[2025-06-05 15:13:22] 2025-06-05 13:12:49,119 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 15:13:22] 2025-06-05 13:12:50,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22550022702912)>', '<ExcThread(monitor, started 22549444413184)>']
[2025-06-05 15:13:22] 2025-06-05 13:12:50,998 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 15:13:22] 2025-06-05 13:12:50,998 | INFO     | [monitor] control thread has ended
[2025-06-05 15:13:22] 2025-06-05 13:12:55,030 | INFO     | all workflow threads have been joined
[2025-06-05 15:13:22] 2025-06-05 13:12:55,030 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 15:13:22] 2025-06-05 13:12:55,031 | INFO     | traces error code: 0
[2025-06-05 15:13:22] 2025-06-05 13:12:55,031 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 15:13:22] 2025-06-05 13:12:55,194 [wrapper] ==== pilot stdout END ====
[2025-06-05 15:13:22] 2025-06-05 13:12:55,197 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 15:13:22] 2025-06-05 13:12:55,200 [wrapper] pilotpid: 1730037
[2025-06-05 15:13:22] 2025-06-05 13:12:55,203 [wrapper] Pilot exit status: 0
[2025-06-05 15:13:22] 2025-06-05 13:12:55,214 [wrapper] pandaids: 6669512200
[2025-06-05 15:13:22] 2025-06-05 13:12:55,280 [wrapper] cleanup supervisor_pilot 2092424 1730038
[2025-06-05 15:13:22] 2025-06-05 13:12:55,283 [wrapper] Test setup, not cleaning
[2025-06-05 15:13:22] 2025-06-05 13:12:55,286 [wrapper] apfmon messages muted
[2025-06-05 15:13:22] 2025-06-05 13:12:55,288 [wrapper] ==== wrapper stdout END ====
[2025-06-05 15:13:22] 2025-06-05 13:12:55,291 [wrapper] ==== wrapper stderr END ====
[2025-06-05 15:13:22]  *** Error codes and diagnostics ***
[2025-06-05 15:13:22]     "exeErrorCode": 0,
[2025-06-05 15:13:22]     "exeErrorDiag": "",
[2025-06-05 15:13:22]     "pilotErrorCode": 0,
[2025-06-05 15:13:22]     "pilotErrorDiag": "",
[2025-06-05 15:13:22]  *** Listing of results directory ***
[2025-06-05 15:13:22] total 416892
[2025-06-05 15:13:22] -rw-r--r-- 1 boinc boinc    495897 May 29 09:54 pilot3.tar.gz
[2025-06-05 15:13:22] -rw-r--r-- 1 boinc boinc      5111 May 29 09:57 queuedata.json
[2025-06-05 15:13:22] -rwx------ 1 boinc boinc     37140 May 29 09:57 runpilot2-wrapper.sh
[2025-06-05 15:13:22] -rw-r--r-- 1 boinc boinc       100 Jun  5 11:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 15:13:22] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 11:23 run_atlas
[2025-06-05 15:13:22] -rw-r--r-- 1 boinc boinc       105 Jun  5 11:23 job.xml
[2025-06-05 15:13:22] -rw-r--r-- 2 boinc boinc 223258622 Jun  5 11:23 EVNT.44871834._003830.pool.root.1
[2025-06-05 15:13:22] -rw-r--r-- 1 boinc boinc      6633 Jun  5 11:23 init_data.xml
[2025-06-05 15:13:22] drwxrwx--x 2 boinc boinc      4096 Jun  5 11:23 shared
[2025-06-05 15:13:22] -rw-r--r-- 2 boinc boinc    508876 Jun  5 11:23 input.tar.gz
[2025-06-05 15:13:22] -rw-r--r-- 2 boinc boinc     15093 Jun  5 11:23 start_atlas.sh
[2025-06-05 15:13:22] -rw-r--r-- 1 boinc boinc         0 Jun  5 11:23 boinc_lockfile
[2025-06-05 15:13:22] -rw-r--r-- 1 boinc boinc      2559 Jun  5 11:23 pandaJob.out
[2025-06-05 15:13:22] -rw------- 1 boinc boinc    983289 Jun  5 11:23 agis_schedconf.cvmfs.json
[2025-06-05 15:13:22] drwx------ 4 boinc boinc      4096 Jun  5 11:23 pilot3
[2025-06-05 15:13:22] -rw------- 1 boinc boinc        95 Jun  5 15:11 pilot_heartbeat.json
[2025-06-05 15:13:22] -rw------- 1 boinc boinc 196550532 Jun  5 15:12 HITS.44871837._097264.pool.root.1
[2025-06-05 15:13:22] -rw-r--r-- 1 boinc boinc       528 Jun  5 15:12 boinc_task_state.xml
[2025-06-05 15:13:22] -rw------- 1 boinc boinc      1035 Jun  5 15:12 memory_monitor_summary.json
[2025-06-05 15:13:22] -rw------- 1 boinc boinc   1598969 Jun  5 15:12 agis_ddmendpoints.agis.ALL.json
[2025-06-05 15:13:22] -rw------- 1 boinc boinc    346028 Jun  5 15:12 log.44871837._097264.job.log.tgz.1
[2025-06-05 15:13:22] -rw------- 1 boinc boinc      7727 Jun  5 15:12 heartbeat.json
[2025-06-05 15:13:22] -rw------- 1 boinc boinc      4758 Jun  5 15:12 pilotlog.txt
[2025-06-05 15:13:22] -rw------- 1 boinc boinc   1278478 Jun  5 15:12 log.44871837._097264.job.log.1
[2025-06-05 15:13:22] -rw------- 1 boinc boinc       357 Jun  5 15:12 output.list
[2025-06-05 15:13:22] -rw-r--r-- 1 boinc boinc       620 Jun  5 15:12 runtime_log
[2025-06-05 15:13:22] -rw------- 1 boinc boinc   1648640 Jun  5 15:12 result.tar.gz
[2025-06-05 15:13:22] -rw-r--r-- 1 boinc boinc      9026 Jun  5 15:12 runtime_log.err
[2025-06-05 15:13:22] -rw------- 1 boinc boinc       664 Jun  5 15:12 U3oLDmYJne7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmb8dKDmlL0RGn.diag
[2025-06-05 15:13:22] -rw-r--r-- 1 boinc boinc        26 Jun  5 15:13 wrapper_checkpoint.txt
[2025-06-05 15:13:22] -rw-r--r-- 1 boinc boinc      8192 Jun  5 15:13 boinc_mmap_file
[2025-06-05 15:13:22] -rw-r--r-- 1 boinc boinc     21011 Jun  5 15:13 stderr.txt
[2025-06-05 15:13:22] HITS file was successfully produced:
[2025-06-05 15:13:22] -rw------- 1 boinc boinc 196550532 Jun  5 15:12 shared/HITS.pool.root.1
[2025-06-05 15:13:22]  *** Contents of shared directory: ***
[2025-06-05 15:13:22] total 412108
[2025-06-05 15:13:22] -rw-r--r-- 2 boinc boinc 223258622 Jun  5 11:23 ATLAS.root_0
[2025-06-05 15:13:22] -rw-r--r-- 2 boinc boinc    508876 Jun  5 11:23 input.tar.gz
[2025-06-05 15:13:22] -rw-r--r-- 2 boinc boinc     15093 Jun  5 11:23 start_atlas.sh
[2025-06-05 15:13:22] -rw------- 1 boinc boinc 196550532 Jun  5 15:12 HITS.pool.root.1
[2025-06-05 15:13:22] -rw------- 1 boinc boinc   1648640 Jun  5 15:12 result.tar.gz
15:13:24 (1726311): run_atlas exited; CPU time 53559.403565
15:13:24 (1726311): called boinc_finish(0)

</stderr_txt>
]]>

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