Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:15:41 (3115259): wrapper (7.7.26015): starting
07:15:41 (3115259): wrapper: running run_atlas (--nthreads 12)
[2025-05-30 07:15:41] Arguments: --nthreads 12
[2025-05-30 07:15:41] Threads: 12
[2025-05-30 07:15:41] Checking for CVMFS
[2025-05-30 07:15:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 07:15:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 07:15:41] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 07:15:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 07:15:41] 2.12.7.0 19155 19849 112916 146587 2 187 39267187 46080000 922 130560 1 26985550 99.993 2987542 4144 http://cvmfs-egi.gridpp.rl.ac.uk:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-05-30 07:15:41] CVMFS is ok
[2025-05-30 07:15:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-30 07:15:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-30 07:15:41] Further information can be found at the LHC@home message board.
[2025-05-30 07:15:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 07:15:41] Checking for apptainer binary...
[2025-05-30 07:15:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-30 07:15:41] Running /usr/bin/apptainer --version
[2025-05-30 07:15:41] apptainer version 1.4.1-1.el9
[2025-05-30 07:15:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 07:15:41] gpu01.farm.particle.cz
[2025-05-30 07:15:41] apptainer works
[2025-05-30 07:15:41] Set ATHENA_PROC_NUMBER=12
[2025-05-30 07:15:41] Set ATHENA_CORE_NUMBER=12
[2025-05-30 07:15:41] Starting ATLAS job with PandaID=6669511868
[2025-05-30 07:15:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 08:12:41]  *** The last 200 lines of the pilot log: ***
[2025-05-30 08:12:41]  lfn=log.44871837._097019.job.log.tgz.1
[2025-05-30 08:12:41]  mtime=0
[2025-05-30 08:12:41]  protocol_id=None
[2025-05-30 08:12:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-30 08:12:41]  replicas=None
[2025-05-30 08:12:41]  scope=mc23_13p6TeV
[2025-05-30 08:12:41]  status=None
[2025-05-30 08:12:41]  status_code=0
[2025-05-30 08:12:41]  storage_token=
[2025-05-30 08:12:41]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6669511868/log.44871837._097019.job.log.tgz.1
[2025-05-30 08:12:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/63/24/log.44871837._097019.job.log.tgz.1
[2025-05-30 08:12:41]  workdir=None
[2025-05-30 08:12:41] ]
[2025-05-30 08:12:41] 2025-05-30 06:12:23,874 | INFO     | transferring file log.44871837._097019.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6669511868/log.44871837._097019.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-05-30 08:12:41] 2025-05-30 06:12:23,874 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6669511868/log.44871837._097019.job.log.tgz.1 /var/lib/boinc/slots/2/log.44871837._097019.job
[2025-05-30 08:12:41] 2025-05-30 06:12:23,887 | INFO     | adding to output.list: log.44871837._097019.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/63/24/log.44871837._097019.job.log.tg
[2025-05-30 08:12:41] 2025-05-30 06:12:23,888 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-30 08:12:41] 2025-05-30 06:12:23,888 | INFO     | summary of transferred files:
[2025-05-30 08:12:41] 2025-05-30 06:12:23,888 | INFO     |  -- lfn=log.44871837._097019.job.log.tgz.1, status_code=0, status=transferred
[2025-05-30 08:12:41] 2025-05-30 06:12:23,888 | INFO     | stage-out finished correctly
[2025-05-30 08:12:41] 2025-05-30 06:12:24,007 | WARNING  | process 3125803 can no longer be monitored (due to stat problems) - aborting
[2025-05-30 08:12:41] 2025-05-30 06:12:24,008 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6669511868/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 08:12:41] 2025-05-30 06:12:24,091 | INFO     | number of running child processes to parent process 3125803: 1
[2025-05-30 08:12:41] 2025-05-30 06:12:24,091 | INFO     | maximum number of monitored processes: 6
[2025-05-30 08:12:41] 2025-05-30 06:12:26,069 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-30 08:12:41] 2025-05-30 06:12:26,594 | INFO     | monitor loop #260: job 0:6669511868 is in state 'finished'
[2025-05-30 08:12:41] 2025-05-30 06:12:26,594 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-30 08:12:41] 2025-05-30 06:12:27,559 | INFO     | PID=3119031 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-30 08:12:41] 2025-05-30 06:12:27,559 | INFO     | .. there are 2 such processes running
[2025-05-30 08:12:41] 2025-05-30 06:12:27,644 | INFO     | job 6669511868 has state=finished
[2025-05-30 08:12:41] 2025-05-30 06:12:27,645 | INFO     | preparing for final server update for job 6669511868 in state='finished'
[2025-05-30 08:12:41] 2025-05-30 06:12:27,645 | INFO     | this job has now completed (state=finished)
[2025-05-30 08:12:41] 2025-05-30 06:12:27,645 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-30 08:12:41] 2025-05-30 06:12:27,645 | INFO     | log transfer has been attempted: DONE
[2025-05-30 08:12:41] 2025-05-30 06:12:27,645 | INFO     | job 6669511868 has finished - writing final server update
[2025-05-30 08:12:41] 2025-05-30 06:12:27,645 | INFO     | total number of processed events: 400 (read)
[2025-05-30 08:12:41] 2025-05-30 06:12:27,648 | INFO     | executing command: lscpu
[2025-05-30 08:12:41] 2025-05-30 06:12:27,677 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-30 08:12:41] 2025-05-30 06:12:29,096 | INFO     | monitor loop #261: job 0:6669511868 is in state 'finished'
[2025-05-30 08:12:41] 2025-05-30 06:12:29,097 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-30 08:12:41] 2025-05-30 06:12:30,332 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-30 08:12:41] 2025-05-30 06:12:30,332 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6669511868/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 08:12:41] 2025-05-30 06:12:30,333 | INFO     | extracted standard info from prmon json
[2025-05-30 08:12:41] 2025-05-30 06:12:30,333 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 08:12:41] 2025-05-30 06:12:30,333 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 08:12:41] 2025-05-30 06:12:30,333 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 08:12:41] 2025-05-30 06:12:30,333 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 08:12:41] 2025-05-30 06:12:30,335 | INFO     | fitting pss+swap vs Time
[2025-05-30 08:12:41] 2025-05-30 06:12:30,335 | INFO     | sum of square deviations: 36465800.0
[2025-05-30 08:12:41] 2025-05-30 06:12:30,335 | INFO     | sum of deviations: -1094330240.0
[2025-05-30 08:12:41] 2025-05-30 06:12:30,335 | INFO     | mean x: 1748583939.0
[2025-05-30 08:12:41] 2025-05-30 06:12:30,335 | INFO     | mean y: 2787927.4693877553
[2025-05-30 08:12:41] 2025-05-30 06:12:30,335 | INFO     | -- intersect: 52477388282.48739
[2025-05-30 08:12:41] 2025-05-30 06:12:30,335 | INFO     | intersect: 52477388282.48739
[2025-05-30 08:12:41] 2025-05-30 06:12:30,335 | INFO     | chi2: 0.004537253800232533
[2025-05-30 08:12:41] 2025-05-30 06:12:30,336 | INFO     | -- intersect: 52477388282.48739
[2025-05-30 08:12:41] 2025-05-30 06:12:30,336 | INFO     | current memory leak: -30.01 B/s (using 49 data points, chi2=0.00)
[2025-05-30 08:12:41] 2025-05-30 06:12:30,336 | INFO     | ..............................
[2025-05-30 08:12:41] 2025-05-30 06:12:30,336 | INFO     | . Timing measurements:
[2025-05-30 08:12:41] 2025-05-30 06:12:30,336 | INFO     | . get job = 0 s
[2025-05-30 08:12:41] 2025-05-30 06:12:30,336 | INFO     | . initial setup = 1 s
[2025-05-30 08:12:41] 2025-05-30 06:12:30,336 | INFO     | . payload setup = 4 s
[2025-05-30 08:12:41] 2025-05-30 06:12:30,336 | INFO     | . stage-in = 0 s
[2025-05-30 08:12:41] 2025-05-30 06:12:30,337 | INFO     | . payload execution = 3372 s
[2025-05-30 08:12:41] 2025-05-30 06:12:30,337 | INFO     | . stage-out = 0 s
[2025-05-30 08:12:41] 2025-05-30 06:12:30,337 | INFO     | . log creation = 0 s
[2025-05-30 08:12:41] 2025-05-30 06:12:30,337 | INFO     | ..............................
[2025-05-30 08:12:41] 2025-05-30 06:12:30,675 | INFO     | 
[2025-05-30 08:12:41] 2025-05-30 06:12:30,675 | INFO     | job summary report
[2025-05-30 08:12:41] 2025-05-30 06:12:30,675 | INFO     | --------------------------------------------------
[2025-05-30 08:12:41] 2025-05-30 06:12:30,675 | INFO     | PanDA job id: 6669511868
[2025-05-30 08:12:41] 2025-05-30 06:12:30,675 | INFO     | task id: 44871837
[2025-05-30 08:12:41] 2025-05-30 06:12:30,675 | INFO     | errors: (none)
[2025-05-30 08:12:41] 2025-05-30 06:12:30,675 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 08:12:41] 2025-05-30 06:12:30,676 | INFO     | pilot state: finished 
[2025-05-30 08:12:41] 2025-05-30 06:12:30,676 | INFO     | transexitcode: 0
[2025-05-30 08:12:41] 2025-05-30 06:12:30,676 | INFO     | exeerrorcode: 0
[2025-05-30 08:12:41] 2025-05-30 06:12:30,676 | INFO     | exeerrordiag: 
[2025-05-30 08:12:41] 2025-05-30 06:12:30,676 | INFO     | exitcode: 0
[2025-05-30 08:12:41] 2025-05-30 06:12:30,676 | INFO     | exitmsg: OK
[2025-05-30 08:12:41] 2025-05-30 06:12:30,676 | INFO     | cpuconsumptiontime: 34999 s
[2025-05-30 08:12:41] 2025-05-30 06:12:30,676 | INFO     | nevents: 400
[2025-05-30 08:12:41] 2025-05-30 06:12:30,676 | INFO     | neventsw: 0
[2025-05-30 08:12:41] 2025-05-30 06:12:30,676 | INFO     | pid: 3125803
[2025-05-30 08:12:41] 2025-05-30 06:12:30,676 | INFO     | pgrp: 3125803
[2025-05-30 08:12:41] 2025-05-30 06:12:30,676 | INFO     | corecount: 12
[2025-05-30 08:12:41] 2025-05-30 06:12:30,676 | INFO     | event service: False
[2025-05-30 08:12:41] 2025-05-30 06:12:30,676 | INFO     | sizes: {0: 2405233, 3: 2405439, 11: 2405467, 3380: 2431054, 3381: 2439995, 3383: 2440051, 3388: 2440349}
[2025-05-30 08:12:41] 2025-05-30 06:12:30,676 | INFO     | --------------------------------------------------
[2025-05-30 08:12:41] 2025-05-30 06:12:30,677 | INFO     | 
[2025-05-30 08:12:41] 2025-05-30 06:12:30,677 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-05-30 08:12:41] 2025-05-30 06:12:30,691 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 08:12:41] 2025-05-30 06:12:30,691 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 08:12:41] 2025-05-30 06:12:30,691 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 08:12:41] 2025-05-30 06:12:30,691 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 08:12:41] 2025-05-30 06:12:30,691 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 08:12:41] 2025-05-30 06:12:30,691 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 08:12:41] 2025-05-30 06:12:30,692 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 08:12:41] 2025-05-30 06:12:30,692 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 08:12:41] 2025-05-30 06:12:30,692 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 08:12:41] 2025-05-30 06:12:30,692 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 08:12:41] 2025-05-30 06:12:30,692 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 08:12:41] 2025-05-30 06:12:30,692 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 08:12:41] 2025-05-30 06:12:30,692 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 08:12:41] 2025-05-30 06:12:30,692 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 08:12:41] 2025-05-30 06:12:30,692 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 08:12:41] 2025-05-30 06:12:30,692 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 08:12:41] 2025-05-30 06:12:30,692 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 08:12:41] 2025-05-30 06:12:30,692 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 08:12:41] 2025-05-30 06:12:30,692 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 08:12:41] 2025-05-30 06:12:30,693 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 08:12:41] 2025-05-30 06:12:30,693 | INFO     | job 6669511868 has completed (purged errors)
[2025-05-30 08:12:41] 2025-05-30 06:12:30,693 | INFO     | overall cleanup function is called
[2025-05-30 08:12:41] 2025-05-30 06:12:31,701 | INFO     | --- collectZombieJob: --- 10, [3125803]
[2025-05-30 08:12:41] 2025-05-30 06:12:31,701 | INFO     | zombie collector waiting for pid 3125803
[2025-05-30 08:12:41] 2025-05-30 06:12:31,701 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 08:12:41] 2025-05-30 06:12:31,701 | INFO     | collected zombie processes
[2025-05-30 08:12:41] 2025-05-30 06:12:31,701 | INFO     | will attempt to kill all subprocesses of pid=3125803
[2025-05-30 08:12:41] 2025-05-30 06:12:31,791 | INFO     | process IDs to be killed: [3125803] (in reverse order)
[2025-05-30 08:12:41] 2025-05-30 06:12:31,829 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 08:12:41] 2025-05-30 06:12:31,830 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 08:12:41] 2025-05-30 06:12:31,833 | INFO     | did not find any defunct processes belonging to 3125803
[2025-05-30 08:12:41] 2025-05-30 06:12:31,836 | INFO     | did not find any defunct processes belonging to 3125803
[2025-05-30 08:12:41] 2025-05-30 06:12:31,836 | INFO     | ready for new job
[2025-05-30 08:12:41] 2025-05-30 06:12:31,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 08:12:41] 2025-05-30 06:12:31,837 | INFO     | **************************************
[2025-05-30 08:12:41] 2025-05-30 06:12:31,837 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 08:12:41] 2025-05-30 06:12:31,837 | INFO     | **************************************
[2025-05-30 08:12:41] 2025-05-30 06:12:31,837 | INFO     | 
[2025-05-30 08:12:41] 2025-05-30 06:12:31,838 | INFO     | architecture information:
[2025-05-30 08:12:41] 2025-05-30 06:12:31,838 | INFO     | executing command: cat /etc/os-release
[2025-05-30 08:12:41] 2025-05-30 06:12:31,851 | INFO     | cat /etc/os-release:
[2025-05-30 08:12:41] NAME="CentOS Linux"
[2025-05-30 08:12:41] VERSION="7 (Core)"
[2025-05-30 08:12:41] ID="centos"
[2025-05-30 08:12:41] ID_LIKE="rhel fedora"
[2025-05-30 08:12:41] VERSION_ID="7"
[2025-05-30 08:12:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 08:12:41] ANSI_COLOR="0;31"
[2025-05-30 08:12:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 08:12:41] HOME_URL="https://www.centos.org/"
[2025-05-30 08:12:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 08:12:41] 
[2025-05-30 08:12:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 08:12:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 08:12:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 08:12:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 08:12:41] 
[2025-05-30 08:12:41] 2025-05-30 06:12:31,852 | INFO     | **************************************
[2025-05-30 08:12:41] 2025-05-30 06:12:32,354 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-05-30 08:12:41] 2025-05-30 06:12:32,366 | INFO     | sufficient remaining disk space (65961721856 B)
[2025-05-30 08:12:41] 2025-05-30 06:12:32,366 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 08:12:41] 2025-05-30 06:12:32,367 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 08:12:41] 2025-05-30 06:12:32,367 | INFO     | update_server=False
[2025-05-30 08:12:41] 2025-05-30 06:12:32,367 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 08:12:41] 2025-05-30 06:12:32,367 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 08:12:41] 2025-05-30 06:12:32,367 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 08:12:41] 2025-05-30 06:12:32,367 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-30 08:12:41] 2025-05-30 06:12:32,367 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 08:12:41] 2025-05-30 06:12:32,368 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 08:12:41] 2025-05-30 06:12:32,368 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 08:12:41] 2025-05-30 06:12:32,368 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 08:12:41] 2025-05-30 06:12:32,412 | INFO     | all data control threads have been joined
[2025-05-30 08:12:41] 2025-05-30 06:12:32,604 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 08:12:41] 2025-05-30 06:12:32,604 | INFO     | aborting loop
[2025-05-30 08:12:41] 2025-05-30 06:12:33,138 | INFO     | all payload control threads have been joined
[2025-05-30 08:12:41] 2025-05-30 06:12:33,372 | INFO     | [job] retrieve thread has finished
[2025-05-30 08:12:41] 2025-05-30 06:12:33,373 | INFO     | [job] queue monitor thread has finished
[2025-05-30 08:12:41] 2025-05-30 06:12:33,381 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 08:12:41] 2025-05-30 06:12:33,417 | INFO     | [data] control thread has finished
[2025-05-30 08:12:41] 2025-05-30 06:12:33,532 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 08:12:41] 2025-05-30 06:12:33,533 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 08:12:41] 2025-05-30 06:12:33,610 | INFO     | [job] job monitor thread has finished
[2025-05-30 08:12:41] 2025-05-30 06:12:33,922 | INFO     | all job control threads have been joined
[2025-05-30 08:12:41] 2025-05-30 06:12:34,136 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 08:12:41] 2025-05-30 06:12:34,143 | INFO     | [payload] control thread has finished
[2025-05-30 08:12:41] 2025-05-30 06:12:34,373 | INFO     | [data] copytool_out thread has finished
[2025-05-30 08:12:41] 2025-05-30 06:12:34,390 | INFO     | [payload] failed_post thread has finished
[2025-05-30 08:12:41] 2025-05-30 06:12:34,414 | INFO     | [data] copytool_in thread has finished
[2025-05-30 08:12:41] 2025-05-30 06:12:34,771 | INFO     | [job] validate thread has finished
[2025-05-30 08:12:41] 2025-05-30 06:12:34,888 | INFO     | [payload] validate_post thread has finished
[2025-05-30 08:12:41] 2025-05-30 06:12:34,928 | INFO     | [job] control thread has finished
[2025-05-30 08:12:41] 2025-05-30 06:12:36,374 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 08:12:41] 2025-05-30 06:12:36,633 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139910359263040)>', '<ExcThread(monitor, started 139909490796288)>']
[2025-05-30 08:12:41] 2025-05-30 06:12:37,394 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 08:12:41] 2025-05-30 06:12:37,394 | INFO     | [monitor] control thread has ended
[2025-05-30 08:12:41] 2025-05-30 06:12:41,658 | INFO     | all workflow threads have been joined
[2025-05-30 08:12:41] 2025-05-30 06:12:41,659 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 08:12:41] 2025-05-30 06:12:41,659 | INFO     | traces error code: 0
[2025-05-30 08:12:41] 2025-05-30 06:12:41,659 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 08:12:41] 2025-05-30 06:12:41,724 [wrapper] ==== pilot stdout END ====
[2025-05-30 08:12:41] 2025-05-30 06:12:41,726 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 08:12:41] 2025-05-30 06:12:41,728 [wrapper] pilotpid: 3119031
[2025-05-30 08:12:41] 2025-05-30 06:12:41,730 [wrapper] Pilot exit status: 0
[2025-05-30 08:12:41] 2025-05-30 06:12:41,737 [wrapper] pandaids: 6669511868
[2025-05-30 08:12:41] 2025-05-30 06:12:41,762 [wrapper] cleanup supervisor_pilot 3176503 3119032
[2025-05-30 08:12:41] 2025-05-30 06:12:41,764 [wrapper] Test setup, not cleaning
[2025-05-30 08:12:41] 2025-05-30 06:12:41,766 [wrapper] apfmon messages muted
[2025-05-30 08:12:41] 2025-05-30 06:12:41,768 [wrapper] ==== wrapper stdout END ====
[2025-05-30 08:12:41] 2025-05-30 06:12:41,770 [wrapper] ==== wrapper stderr END ====
[2025-05-30 08:12:41]  *** Error codes and diagnostics ***
[2025-05-30 08:12:41]     "exeErrorCode": 0,
[2025-05-30 08:12:41]     "exeErrorDiag": "",
[2025-05-30 08:12:41]     "pilotErrorCode": 0,
[2025-05-30 08:12:41]     "pilotErrorDiag": "",
[2025-05-30 08:12:41]  *** Listing of results directory ***
[2025-05-30 08:12:41] total 417072
[2025-05-30 08:12:41] -rw-r--r-- 1 boinc boinc    495897 May 29 09:39 pilot3.tar.gz
[2025-05-30 08:12:41] -rwx------ 1 boinc boinc     37140 May 29 09:46 runpilot2-wrapper.sh
[2025-05-30 08:12:41] -rw-r--r-- 1 boinc boinc      5111 May 29 09:46 queuedata.json
[2025-05-30 08:12:41] -rw-r--r-- 1 boinc boinc       100 May 30 07:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 08:12:41] -rwxr-xr-x 1 boinc boinc      7986 May 30 07:15 run_atlas
[2025-05-30 08:12:41] -rw-r--r-- 1 boinc boinc       105 May 30 07:15 job.xml
[2025-05-30 08:12:41] -rw-r--r-- 1 boinc boinc      9436 May 30 07:15 init_data.xml
[2025-05-30 08:12:41] -rw-r--r-- 2 boinc boinc 222431629 May 30 07:15 EVNT.44871834._003821.pool.root.1
[2025-05-30 08:12:41] -rw-r--r-- 2 boinc boinc     15093 May 30 07:15 start_atlas.sh
[2025-05-30 08:12:41] drwxrwx--x 2 boinc boinc      4096 May 30 07:15 shared
[2025-05-30 08:12:41] -rw-r--r-- 2 boinc boinc    508874 May 30 07:15 input.tar.gz
[2025-05-30 08:12:41] -rw-r--r-- 1 boinc boinc         0 May 30 07:15 boinc_lockfile
[2025-05-30 08:12:41] -rw-r--r-- 1 boinc boinc      2558 May 30 07:15 pandaJob.out
[2025-05-30 08:12:41] -rw------- 1 boinc boinc    992366 May 30 07:15 agis_schedconf.cvmfs.json
[2025-05-30 08:12:41] -rw------- 1 boinc boinc   1603667 May 30 07:15 agis_ddmendpoints.agis.ALL.json
[2025-05-30 08:12:41] drwx------ 4 boinc boinc      4096 May 30 07:15 pilot3
[2025-05-30 08:12:41] -rw------- 1 boinc boinc 199411356 May 30 08:11 HITS.44871837._097019.pool.root.1
[2025-05-30 08:12:41] -rw-r--r-- 1 boinc boinc       529 May 30 08:12 boinc_task_state.xml
[2025-05-30 08:12:41] -rw------- 1 boinc boinc        95 May 30 08:12 pilot_heartbeat.json
[2025-05-30 08:12:41] -rw------- 1 boinc boinc      1013 May 30 08:12 memory_monitor_summary.json
[2025-05-30 08:12:41] -rw------- 1 boinc boinc    340452 May 30 08:12 log.44871837._097019.job.log.tgz.1
[2025-05-30 08:12:41] -rw------- 1 boinc boinc      7685 May 30 08:12 heartbeat.json
[2025-05-30 08:12:41] -rw-r--r-- 1 boinc boinc      8192 May 30 08:12 boinc_mmap_file
[2025-05-30 08:12:41] -rw-r--r-- 1 boinc boinc        27 May 30 08:12 wrapper_checkpoint.txt
[2025-05-30 08:12:41] -rw------- 1 boinc boinc      4476 May 30 08:12 pilotlog.txt
[2025-05-30 08:12:41] -rw------- 1 boinc boinc    353176 May 30 08:12 log.44871837._097019.job.log.1
[2025-05-30 08:12:41] -rw------- 1 boinc boinc       357 May 30 08:12 output.list
[2025-05-30 08:12:41] -rw-r--r-- 1 boinc boinc       620 May 30 08:12 runtime_log
[2025-05-30 08:12:41] -rw------- 1 boinc boinc    716800 May 30 08:12 result.tar.gz
[2025-05-30 08:12:41] -rw------- 1 boinc boinc       658 May 30 08:12 veyMDmS9me7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDms5dKDmEGB4Pn.diag
[2025-05-30 08:12:41] -rw-r--r-- 1 boinc boinc      8696 May 30 08:12 runtime_log.err
[2025-05-30 08:12:41] -rw-r--r-- 1 boinc boinc     21705 May 30 08:12 stderr.txt
[2025-05-30 08:12:41] HITS file was successfully produced:
[2025-05-30 08:12:41] -rw------- 1 boinc boinc 199411356 May 30 08:11 shared/HITS.pool.root.1
[2025-05-30 08:12:41]  *** Contents of shared directory: ***
[2025-05-30 08:12:41] total 413180
[2025-05-30 08:12:41] -rw-r--r-- 2 boinc boinc 222431629 May 30 07:15 ATLAS.root_0
[2025-05-30 08:12:41] -rw-r--r-- 2 boinc boinc     15093 May 30 07:15 start_atlas.sh
[2025-05-30 08:12:41] -rw-r--r-- 2 boinc boinc    508874 May 30 07:15 input.tar.gz
[2025-05-30 08:12:41] -rw------- 1 boinc boinc 199411356 May 30 08:11 HITS.pool.root.1
[2025-05-30 08:12:41] -rw------- 1 boinc boinc    716800 May 30 08:12 result.tar.gz
08:12:43 (3115259): run_atlas exited; CPU time 35027.621978
08:12:43 (3115259): called boinc_finish(0)

</stderr_txt>
]]>

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