Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:12:23 (942229): wrapper (7.7.26015): starting
07:12:23 (942229): wrapper: running run_atlas (--nthreads 12)
[2025-05-29 07:12:23] Arguments: --nthreads 12
[2025-05-29 07:12:23] Threads: 12
[2025-05-29 07:12:23] Checking for CVMFS
[2025-05-29 07:12:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 07:12:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 07:12:24] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 07:12:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 07:12:25] 2.11.5.0 1172203 15107 238832 146564 1 25 36293447 45568001 14402 130560 0 168546356 99.802 107343804 28784 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-29 07:12:25] CVMFS is ok
[2025-05-29 07:12:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-29 07:12:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-29 07:12:25] Further information can be found at the LHC@home message board.
[2025-05-29 07:12:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 07:12:25] Checking for apptainer binary...
[2025-05-29 07:12:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 07:12:25] Running /usr/bin/apptainer --version
[2025-05-29 07:12:25] apptainer version 1.4.0-1.el9
[2025-05-29 07:12:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 07:12:26] wns0066.triumf.lcg
[2025-05-29 07:12:26] apptainer works
[2025-05-29 07:12:26] Set ATHENA_PROC_NUMBER=12
[2025-05-29 07:12:26] Set ATHENA_CORE_NUMBER=12
[2025-05-29 07:12:26] Starting ATLAS job with PandaID=6670895951
[2025-05-29 07:12:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 07:18:06]  *** The last 200 lines of the pilot log: ***
[2025-05-29 07:18:06] 2025-05-29 14:17:49,628 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-29 07:18:06] 2025-05-29 14:17:49,628 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6670895951/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 07:18:06] 2025-05-29 14:17:49,629 | INFO     | extracted standard info from prmon json
[2025-05-29 07:18:06] 2025-05-29 14:17:49,629 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 07:18:06] 2025-05-29 14:17:49,629 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 07:18:06] 2025-05-29 14:17:49,630 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 07:18:06] 2025-05-29 14:17:49,630 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 07:18:06] 2025-05-29 14:17:49,631 | WARNING  | wrong length of table data, x=[1748528082.0], y=[929.0] (must be same and length>=4)
[2025-05-29 07:18:06] 2025-05-29 14:17:49,631 | INFO     | ..............................
[2025-05-29 07:18:06] 2025-05-29 14:17:49,631 | INFO     | . Timing measurements:
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . get job = 0 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . initial setup = 4 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . payload setup = 24 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . stage-in = 0 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . payload execution = 59 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . stage-out = 3 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . log creation = 0 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | ..............................
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6670895951/pilotlog.txt
[2025-05-29 07:18:06] 2025-05-29 14:17:49,647 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-29 07:18:06] - Log from pilotlog.txt -
[2025-05-29 07:18:06] 2025-05-29 14:17:49,628 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-29 07:18:06] 2025-05-29 14:17:49,628 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6670895951/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 07:18:06] 2025-05-29 14:17:49,629 | INFO     | extracted standard info from prmon json
[2025-05-29 07:18:06] 2025-05-29 14:17:49,629 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 07:18:06] 2025-05-29 14:17:49,629 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 07:18:06] 2025-05-29 14:17:49,630 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 07:18:06] 2025-05-29 14:17:49,630 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 07:18:06] 2025-05-29 14:17:49,631 | WARNING  | wrong length of table data, x=[1748528082.0], y=[929.0] (must be same and length>=4)
[2025-05-29 07:18:06] 2025-05-29 14:17:49,631 | INFO     | ..............................
[2025-05-29 07:18:06] 2025-05-29 14:17:49,631 | INFO     | . Timing measurements:
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . get job = 0 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . initial setup = 4 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . payload setup = 24 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . stage-in = 0 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . payload execution = 59 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . stage-out = 3 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . log creation = 0 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | ..............................
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6670895951/pilotlog.txt
[2025-05-29 07:18:06] 2025-05-29 14:17:49,647 | WARNING  | 
[2025-05-29 07:18:06] [begin log extracts]
[2025-05-29 07:18:06] - Log from pilotlog.txt -
[2025-05-29 07:18:06] 2025-05-29 14:17:49,628 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-29 07:18:06] 2025-05-29 14:17:49,628 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6670895951/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 07:18:06] 2025-05-29 14:17:49,629 | INFO     | extracted standard info from prmon json
[2025-05-29 07:18:06] 2025-05-29 14:17:49,629 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 07:18:06] 2025-05-29 14:17:49,629 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 07:18:06] 2025-05-29 14:17:49,630 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 07:18:06] 2025-05-29 14:17:49,630 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 07:18:06] 2025-05-29 14:17:49,631 | WARNING  | wrong length of table data, x=[1748528082.0], y=[929.0] (must be same and length>=4)
[2025-05-29 07:18:06] 2025-05-29 14:17:49,631 | INFO     | ..............................
[2025-05-29 07:18:06] 2025-05-29 14:17:49,631 | INFO     | . Timing measurements:
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . get job = 0 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . initial setup = 4 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . payload setup = 24 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . stage-in = 0 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . payload execution = 59 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . stage-out = 3 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | . log creation = 0 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | ..............................
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-29 07:18:06] 2025-05-29 14:17:49,632 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6670895951/pilotlog.txt
[2025-05-29 07:18:06] [end log extracts]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,648 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-29 07:18:06] 2025-05-29 14:17:49,649 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-29 07:18:06] 2025-05-29 14:17:49,822 | INFO     | 
[2025-05-29 07:18:06] 2025-05-29 14:17:49,823 | INFO     | job summary report
[2025-05-29 07:18:06] 2025-05-29 14:17:49,823 | INFO     | --------------------------------------------------
[2025-05-29 07:18:06] 2025-05-29 14:17:49,823 | INFO     | PanDA job id: 6670895951
[2025-05-29 07:18:06] 2025-05-29 14:17:49,823 | INFO     | task id: 44871837
[2025-05-29 07:18:06] 2025-05-29 14:17:49,823 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-29 07:15:15,757 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-29 07:18:06] 2025-05-29 14:17:49,823 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 07:18:06] 2025-05-29 14:17:49,823 | INFO     | pilot state: failed 
[2025-05-29 07:18:06] 2025-05-29 14:17:49,823 | INFO     | transexitcode: 65
[2025-05-29 07:18:06] 2025-05-29 14:17:49,823 | INFO     | exeerrorcode: 65
[2025-05-29 07:18:06] 2025-05-29 14:17:49,823 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-29 07:18:06] 2025-05-29 14:17:49,823 | INFO     | exitcode: 65
[2025-05-29 07:18:06] 2025-05-29 14:17:49,823 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-29 07:18:06] 2025-05-29 14:17:49,823 | INFO     | cpuconsumptiontime: 19 s
[2025-05-29 07:18:06] 2025-05-29 14:17:49,823 | INFO     | nevents: 0
[2025-05-29 07:18:06] 2025-05-29 14:17:49,823 | INFO     | neventsw: 0
[2025-05-29 07:18:06] 2025-05-29 14:17:49,824 | INFO     | pid: 957797
[2025-05-29 07:18:06] 2025-05-29 14:17:49,824 | INFO     | pgrp: 957797
[2025-05-29 07:18:06] 2025-05-29 14:17:49,824 | INFO     | corecount: 12
[2025-05-29 07:18:06] 2025-05-29 14:17:49,824 | INFO     | event service: False
[2025-05-29 07:18:06] 2025-05-29 14:17:49,824 | INFO     | sizes: {0: 2404303, 1: 2404985, 2: 2405184, 3: 2405184, 4: 2405212, 14: 2405240, 25: 2405396, 26: 2405630, 36: 2405658, 88: 2428841, 89: 2428817, 93: 2433388, 231:
[2025-05-29 07:18:06] 2025-05-29 14:17:49,824 | INFO     | --------------------------------------------------
[2025-05-29 07:18:06] 2025-05-29 14:17:49,824 | INFO     | 
[2025-05-29 07:18:06] 2025-05-29 14:17:49,824 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-29 07:18:06] 2025-05-29 14:17:49,878 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,879 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,879 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,879 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,879 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,879 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,879 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,879 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,879 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,879 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,879 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,879 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,880 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,880 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,880 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,880 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,880 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,880 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 07:18:06] 2025-05-29 14:17:49,880 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,880 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 07:18:06] 2025-05-29 14:17:49,880 | INFO     | job 6670895951 has completed (purged errors)
[2025-05-29 07:18:06] 2025-05-29 14:17:49,880 | INFO     | overall cleanup function is called
[2025-05-29 07:18:06] 2025-05-29 14:17:50,888 | INFO     | --- collectZombieJob: --- 10, [957797]
[2025-05-29 07:18:06] 2025-05-29 14:17:50,889 | INFO     | zombie collector waiting for pid 957797
[2025-05-29 07:18:06] 2025-05-29 14:17:50,889 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 07:18:06] 2025-05-29 14:17:50,889 | INFO     | collected zombie processes
[2025-05-29 07:18:06] 2025-05-29 14:17:50,889 | INFO     | will attempt to kill all subprocesses of pid=957797
[2025-05-29 07:18:06] 2025-05-29 14:17:51,272 | INFO     | process IDs to be killed: [957797] (in reverse order)
[2025-05-29 07:18:06] 2025-05-29 14:17:51,386 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 07:18:06] 2025-05-29 14:17:51,386 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 07:18:06] 2025-05-29 14:17:51,405 | INFO     | did not find any defunct processes belonging to 957797
[2025-05-29 07:18:06] 2025-05-29 14:17:51,417 | INFO     | did not find any defunct processes belonging to 957797
[2025-05-29 07:18:06] 2025-05-29 14:17:51,418 | INFO     | ready for new job
[2025-05-29 07:18:06] 2025-05-29 14:17:51,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 07:18:06] 2025-05-29 14:17:51,420 | INFO     | **************************************
[2025-05-29 07:18:06] 2025-05-29 14:17:51,420 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 07:18:06] 2025-05-29 14:17:51,420 | INFO     | **************************************
[2025-05-29 07:18:06] 2025-05-29 14:17:51,420 | INFO     | 
[2025-05-29 07:18:06] 2025-05-29 14:17:51,423 | INFO     | architecture information:
[2025-05-29 07:18:06] 2025-05-29 14:17:51,424 | INFO     | executing command: cat /etc/os-release
[2025-05-29 07:18:06] 2025-05-29 14:17:51,481 | INFO     | cat /etc/os-release:
[2025-05-29 07:18:06] NAME="CentOS Linux"
[2025-05-29 07:18:06] VERSION="7 (Core)"
[2025-05-29 07:18:06] ID="centos"
[2025-05-29 07:18:06] ID_LIKE="rhel fedora"
[2025-05-29 07:18:06] VERSION_ID="7"
[2025-05-29 07:18:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 07:18:06] ANSI_COLOR="0;31"
[2025-05-29 07:18:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 07:18:06] HOME_URL="https://www.centos.org/"
[2025-05-29 07:18:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 07:18:06] 
[2025-05-29 07:18:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 07:18:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 07:18:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 07:18:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 07:18:06] 
[2025-05-29 07:18:06] 2025-05-29 14:17:51,482 | INFO     | **************************************
[2025-05-29 07:18:06] 2025-05-29 14:17:51,985 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-29 07:18:06] 2025-05-29 14:17:52,161 | INFO     | sufficient remaining disk space (1975925080064 B)
[2025-05-29 07:18:06] 2025-05-29 14:17:52,161 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 07:18:06] 2025-05-29 14:17:52,161 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 07:18:06] 2025-05-29 14:17:52,161 | INFO     | update_server=False
[2025-05-29 07:18:06] 2025-05-29 14:17:52,161 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 07:18:06] 2025-05-29 14:17:52,162 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 07:18:06] 2025-05-29 14:17:52,163 | INFO     | aborting loop
[2025-05-29 07:18:06] 2025-05-29 14:17:52,263 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 07:18:06] 2025-05-29 14:17:52,264 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 07:18:06] 2025-05-29 14:17:52,264 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 07:18:06] 2025-05-29 14:17:52,453 | INFO     | all data control threads have been joined
[2025-05-29 07:18:06] 2025-05-29 14:17:52,666 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 07:18:06] 2025-05-29 14:17:53,167 | INFO     | [job] retrieve thread has finished
[2025-05-29 07:18:06] 2025-05-29 14:17:53,168 | INFO     | [job] job monitor thread has finished
[2025-05-29 07:18:06] 2025-05-29 14:17:53,199 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 07:18:06] 2025-05-29 14:17:53,229 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 07:18:06] 2025-05-29 14:17:53,258 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 07:18:06] 2025-05-29 14:17:53,331 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 07:18:06] 2025-05-29 14:17:53,333 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 07:18:06] 2025-05-29 14:17:53,409 | INFO     | [data] copytool_in thread has finished
[2025-05-29 07:18:06] 2025-05-29 14:17:53,448 | INFO     | [job] validate thread has finished
[2025-05-29 07:18:06] 2025-05-29 14:17:53,467 | INFO     | [data] control thread has finished
[2025-05-29 07:18:06] 2025-05-29 14:17:53,620 | INFO     | all payload control threads have been joined
[2025-05-29 07:18:06] 2025-05-29 14:17:53,726 | INFO     | all job control threads have been joined
[2025-05-29 07:18:06] 2025-05-29 14:17:54,263 | INFO     | [payload] failed_post thread has finished
[2025-05-29 07:18:06] 2025-05-29 14:17:54,626 | INFO     | [payload] control thread has finished
[2025-05-29 07:18:06] 2025-05-29 14:17:54,673 | INFO     | [data] copytool_out thread has finished
[2025-05-29 07:18:06] 2025-05-29 14:17:54,731 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 07:18:06] 2025-05-29 14:17:54,732 | INFO     | [job] control thread has finished
[2025-05-29 07:18:06] 2025-05-29 14:17:54,765 | INFO     | [payload] validate_post thread has finished
[2025-05-29 07:18:06] 2025-05-29 14:17:55,737 | INFO     | [job] queue monitor thread has finished
[2025-05-29 07:18:06] 2025-05-29 14:17:57,238 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 07:18:06] 2025-05-29 14:17:58,892 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139785967654720)>', '<ExcThread(monitor, started 139785188394752)>']
[2025-05-29 07:18:06] 2025-05-29 14:17:59,305 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 07:18:06] 2025-05-29 14:17:59,305 | INFO     | [monitor] control thread has ended
[2025-05-29 07:18:06] 2025-05-29 14:18:03,918 | INFO     | all workflow threads have been joined
[2025-05-29 07:18:06] 2025-05-29 14:18:03,918 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 07:18:06] 2025-05-29 14:18:03,919 | INFO     | traces error code: 0
[2025-05-29 07:18:06] 2025-05-29 14:18:03,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 07:18:06] 2025-05-29 14:18:04,154 [wrapper] ==== pilot stdout END ====
[2025-05-29 07:18:06] 2025-05-29 14:18:04,192 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 07:18:06] 2025-05-29 14:18:04,220 [wrapper] pilotpid: 945804
[2025-05-29 07:18:06] 2025-05-29 14:18:04,255 [wrapper] Pilot exit status: 0
[2025-05-29 07:18:06] 2025-05-29 14:18:04,560 [wrapper] pandaids: 6670895951
[2025-05-29 07:18:06] 2025-05-29 14:18:05,037 [wrapper] cleanup supervisor_pilot  945810 945805
[2025-05-29 07:18:06] 2025-05-29 14:18:05,080 [wrapper] Test setup, not cleaning
[2025-05-29 07:18:06] 2025-05-29 14:18:05,122 [wrapper] apfmon messages muted
[2025-05-29 07:18:06] 2025-05-29 14:18:05,157 [wrapper] ==== wrapper stdout END ====
[2025-05-29 07:18:06] 2025-05-29 14:18:05,186 [wrapper] ==== wrapper stderr END ====
[2025-05-29 07:18:06]  *** Error codes and diagnostics ***
[2025-05-29 07:18:06]     "exeErrorCode": 65,
[2025-05-29 07:18:06]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-29 07:18:06]     "pilotErrorCode": 1305,
[2025-05-29 07:18:06]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-29 07:18:06]  *** Listing of results directory ***
[2025-05-29 07:18:06] total 221748
[2025-05-29 07:18:06] -rw-r--r--. 1 boinc boinc    495897 May 29 03:51 pilot3.tar.gz
[2025-05-29 07:18:06] -rw-r--r--. 1 boinc boinc      5111 May 29 03:59 queuedata.json
[2025-05-29 07:18:06] -rwx------. 1 boinc boinc     37140 May 29 03:59 runpilot2-wrapper.sh
[2025-05-29 07:18:06] -rw-r--r--. 1 boinc boinc       100 May 29 07:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 07:18:06] -rwxr-xr-x. 1 boinc boinc      7986 May 29 07:12 run_atlas
[2025-05-29 07:18:06] -rw-r--r--. 1 boinc boinc       105 May 29 07:12 job.xml
[2025-05-29 07:18:06] -rw-r--r--. 1 boinc boinc      6602 May 29 07:12 init_data.xml
[2025-05-29 07:18:06] -rw-r--r--. 2 boinc boinc 223023597 May 29 07:12 EVNT.44871834._002852.pool.root.1
[2025-05-29 07:18:06] drwxrwx--x. 2 boinc boinc      4096 May 29 07:12 shared
[2025-05-29 07:18:06] -rw-r--r--. 2 boinc boinc    508877 May 29 07:12 input.tar.gz
[2025-05-29 07:18:06] -rw-r--r--. 2 boinc boinc     15093 May 29 07:12 start_atlas.sh
[2025-05-29 07:18:06] -rw-r--r--. 1 boinc boinc         0 May 29 07:12 boinc_lockfile
[2025-05-29 07:18:06] -rw-r--r--. 1 boinc boinc      2557 May 29 07:12 pandaJob.out
[2025-05-29 07:18:06] -rw-------. 1 boinc boinc    992820 May 29 07:13 agis_schedconf.cvmfs.json
[2025-05-29 07:18:06] -rw-------. 1 boinc boinc   1603667 May 29 07:13 agis_ddmendpoints.agis.ALL.json
[2025-05-29 07:18:06] drwx------. 4 boinc boinc      4096 May 29 07:13 pilot3
[2025-05-29 07:18:06] -rw-r--r--. 1 boinc boinc       524 May 29 07:15 boinc_task_state.xml
[2025-05-29 07:18:06] -rw-------. 1 boinc boinc       958 May 29 07:15 memory_monitor_summary.json
[2025-05-29 07:18:06] -rw-------. 1 boinc boinc     21325 May 29 07:15 log.44871837._099207.job.log.tgz.1
[2025-05-29 07:18:06] -rw-------. 1 boinc boinc        95 May 29 07:17 pilot_heartbeat.json
[2025-05-29 07:18:06] -rw-------. 1 boinc boinc      8322 May 29 07:17 heartbeat.json
[2025-05-29 07:18:06] -rw-r--r--. 1 boinc boinc      8192 May 29 07:18 boinc_mmap_file
[2025-05-29 07:18:06] -rw-r--r--. 1 boinc boinc        22 May 29 07:18 wrapper_checkpoint.txt
[2025-05-29 07:18:06] -rw-------. 1 boinc boinc      4352 May 29 07:18 pilotlog.txt
[2025-05-29 07:18:06] -rw-------. 1 boinc boinc     80823 May 29 07:18 log.44871837._099207.job.log.1
[2025-05-29 07:18:06] -rw-------. 1 boinc boinc       188 May 29 07:18 output.list
[2025-05-29 07:18:06] -rw-r--r--. 1 boinc boinc       620 May 29 07:18 runtime_log
[2025-05-29 07:18:06] -rw-------. 1 boinc boinc    122880 May 29 07:18 result.tar.gz
[2025-05-29 07:18:06] -rw-r--r--. 1 boinc boinc      8484 May 29 07:18 runtime_log.err
[2025-05-29 07:18:06] -rw-------. 1 boinc boinc       647 May 29 07:18 lD2NDmAAqe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcPeKDmU6G7im.diag
[2025-05-29 07:18:06] -rw-r--r--. 1 boinc boinc     21678 May 29 07:18 stderr.txt
[2025-05-29 07:18:06] No HITS result produced
[2025-05-29 07:18:06]  *** Contents of shared directory: ***
[2025-05-29 07:18:06] total 218436
[2025-05-29 07:18:06] -rw-r--r--. 2 boinc boinc 223023597 May 29 07:12 ATLAS.root_0
[2025-05-29 07:18:06] -rw-r--r--. 2 boinc boinc    508877 May 29 07:12 input.tar.gz
[2025-05-29 07:18:06] -rw-r--r--. 2 boinc boinc     15093 May 29 07:12 start_atlas.sh
[2025-05-29 07:18:06] -rw-------. 1 boinc boinc    122880 May 29 07:18 result.tar.gz
07:18:07 (942229): run_atlas exited; CPU time 28.901809
07:18:07 (942229): called boinc_finish(0)

</stderr_txt>
]]>

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