Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:12:40 (3256064): wrapper (7.7.26015): starting
20:12:40 (3256064): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 20:12:40] Arguments: --nthreads 4
[2025-06-03 20:12:40] Threads: 4
[2025-06-03 20:12:40] Checking for CVMFS
[2025-06-03 20:12:40] No cvmfs_config command found, will try listing directly
[2025-06-03 20:12:40] CVMFS is ok
[2025-06-03 20:12:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 20:12:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 20:12:40] Further information can be found at the LHC@home message board.
[2025-06-03 20:12:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 20:12:40] Checking for apptainer binary...
[2025-06-03 20:12:40] which: no apptainer in ((null))
[2025-06-03 20:12:40] apptainer is not installed, using version from CVMFS
[2025-06-03 20:12:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 20:12:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-06-03 20:12:40] apptainer works
[2025-06-03 20:12:40] Set ATHENA_PROC_NUMBER=4
[2025-06-03 20:12:40] Set ATHENA_CORE_NUMBER=4
[2025-06-03 20:12:40] Starting ATLAS job with PandaID=6669511769
[2025-06-03 20:12:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:34:20]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:34:20] 2025-06-03 21:33:42,285 | INFO     | executing command: lscpu
[2025-06-03 23:34:20] 2025-06-03 21:33:42,401 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 23:34:20] 2025-06-03 21:33:43,117 | INFO     | monitor loop #830: job 0:6669511769 is in state 'finished'
[2025-06-03 23:34:20] 2025-06-03 21:33:43,117 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:34:20] 2025-06-03 21:33:45,622 | INFO     | monitor loop #831: job 0:6669511769 is in state 'finished'
[2025-06-03 23:34:20] 2025-06-03 21:33:45,622 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:34:20] 2025-06-03 21:33:48,126 | INFO     | monitor loop #832: job 0:6669511769 is in state 'finished'
[2025-06-03 23:34:20] 2025-06-03 21:33:48,126 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:34:20] 2025-06-03 21:33:49,036 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 23:34:20] 2025-06-03 21:33:49,037 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6669511769/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:34:20] 2025-06-03 21:33:49,037 | INFO     | extracted standard info from prmon json
[2025-06-03 23:34:20] 2025-06-03 21:33:49,037 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:34:20] 2025-06-03 21:33:49,037 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:34:20] 2025-06-03 21:33:49,038 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:34:20] 2025-06-03 21:33:49,038 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:34:20] 2025-06-03 21:33:49,042 | INFO     | fitting pss+swap vs Time
[2025-06-03 23:34:20] 2025-06-03 21:33:49,042 | INFO     | sum of square deviations: 2370641658.0
[2025-06-03 23:34:20] 2025-06-03 21:33:49,043 | INFO     | sum of deviations: 3941904484.999995
[2025-06-03 23:34:20] 2025-06-03 21:33:49,044 | INFO     | mean x: 1748980388.0
[2025-06-03 23:34:20] 2025-06-03 21:33:49,044 | INFO     | mean y: 2336906.573604061
[2025-06-03 23:34:20] 2025-06-03 21:33:49,044 | INFO     | -- intersect: -2905868815.8596396
[2025-06-03 23:34:20] 2025-06-03 21:33:49,044 | INFO     | intersect: -2905868815.8596396
[2025-06-03 23:34:20] 2025-06-03 21:33:49,044 | INFO     | chi2: 1.6447776528686582
[2025-06-03 23:34:20] 2025-06-03 21:33:49,045 | INFO     | sum of square deviations: 2194675568.0
[2025-06-03 23:34:20] 2025-06-03 21:33:49,046 | INFO     | sum of deviations: 4199625062.500014
[2025-06-03 23:34:20] 2025-06-03 21:33:49,046 | INFO     | mean x: 1748980235.5
[2025-06-03 23:34:20] 2025-06-03 21:33:49,046 | INFO     | mean y: 2337129.9739583335
[2025-06-03 23:34:20] 2025-06-03 21:33:49,046 | INFO     | -- intersect: -3344426891.970526
[2025-06-03 23:34:20] 2025-06-03 21:33:49,046 | INFO     | intersect: -3344426891.970526
[2025-06-03 23:34:20] 2025-06-03 21:33:49,047 | INFO     | chi2: 1.645741344984165
[2025-06-03 23:34:20] 2025-06-03 21:33:49,047 | INFO     | current chi2=1.645741344984165 (change=-0.058591026806933746 %)
[2025-06-03 23:34:20] 2025-06-03 21:33:49,047 | INFO     | right removable region: 191
[2025-06-03 23:34:20] 2025-06-03 21:33:49,047 | INFO     | sum of square deviations: 2194675568.0
[2025-06-03 23:34:20] 2025-06-03 21:33:49,048 | INFO     | sum of deviations: -26548266767.999996
[2025-06-03 23:34:20] 2025-06-03 21:33:49,048 | INFO     | mean x: 1748980540.5
[2025-06-03 23:34:20] 2025-06-03 21:33:49,048 | INFO     | mean y: 2363041.5833333335
[2025-06-03 23:34:20] 2025-06-03 21:33:49,048 | INFO     | -- intersect: 21159204006.258812
[2025-06-03 23:34:20] 2025-06-03 21:33:49,049 | INFO     | intersect: 21159204006.258812
[2025-06-03 23:34:20] 2025-06-03 21:33:49,049 | INFO     | chi2: 0.032774615804436635
[2025-06-03 23:34:20] 2025-06-03 21:33:49,049 | INFO     | current chi2=0.032774615804436635 (change=98.00735280253386 %)
[2025-06-03 23:34:20] 2025-06-03 21:33:49,049 | INFO     | sum of square deviations: 2027639878.0
[2025-06-03 23:34:20] 2025-06-03 21:33:49,051 | INFO     | sum of deviations: -25263143411.999996
[2025-06-03 23:34:20] 2025-06-03 21:33:49,051 | INFO     | mean x: 1748980693.0
[2025-06-03 23:34:20] 2025-06-03 21:33:49,051 | INFO     | mean y: 2361861.8770053475
[2025-06-03 23:34:20] 2025-06-03 21:33:49,051 | INFO     | -- intersect: 21793583543.540016
[2025-06-03 23:34:20] 2025-06-03 21:33:49,051 | INFO     | intersect: 21793583543.540016
[2025-06-03 23:34:20] 2025-06-03 21:33:49,051 | INFO     | chi2: 0.03196947256071489
[2025-06-03 23:34:20] 2025-06-03 21:33:49,051 | INFO     | current chi2=0.03196947256071489 (change=2.456606199523336 %)
[2025-06-03 23:34:20] 2025-06-03 21:33:49,051 | INFO     | left removable region: 20
[2025-06-03 23:34:20] 2025-06-03 21:33:49,052 | INFO     | sum of square deviations: 1550429070.0
[2025-06-03 23:34:20] 2025-06-03 21:33:49,053 | INFO     | sum of deviations: -20140921561.999996
[2025-06-03 23:34:20] 2025-06-03 21:33:49,053 | INFO     | mean x: 1748980815.0
[2025-06-03 23:34:20] 2025-06-03 21:33:49,053 | INFO     | mean y: 2358752.0116959065
[2025-06-03 23:34:20] 2025-06-03 21:33:49,053 | INFO     | -- intersect: 22722576071.181175
[2025-06-03 23:34:20] 2025-06-03 21:33:49,053 | INFO     | intersect: 22722576071.181175
[2025-06-03 23:34:20] 2025-06-03 21:33:49,053 | INFO     | chi2: 0.03029921007874017
[2025-06-03 23:34:20] 2025-06-03 21:33:49,054 | INFO     | -- intersect: 22722576071.181175
[2025-06-03 23:34:20] 2025-06-03 21:33:49,054 | INFO     | current memory leak: -12.99 B/s (using 171 data points, chi2=0.03)
[2025-06-03 23:34:20] 2025-06-03 21:33:49,054 | INFO     | ..............................
[2025-06-03 23:34:20] 2025-06-03 21:33:49,054 | INFO     | . Timing measurements:
[2025-06-03 23:34:20] 2025-06-03 21:33:49,054 | INFO     | . get job = 0 s
[2025-06-03 23:34:20] 2025-06-03 21:33:49,055 | INFO     | . initial setup = 1 s
[2025-06-03 23:34:20] 2025-06-03 21:33:49,055 | INFO     | . payload setup = 10 s
[2025-06-03 23:34:20] 2025-06-03 21:33:49,055 | INFO     | . stage-in = 0 s
[2025-06-03 23:34:20] 2025-06-03 21:33:49,055 | INFO     | . payload execution = 12007 s
[2025-06-03 23:34:20] 2025-06-03 21:33:49,055 | INFO     | . stage-out = 1 s
[2025-06-03 23:34:20] 2025-06-03 21:33:49,055 | INFO     | . log creation = 0 s
[2025-06-03 23:34:20] 2025-06-03 21:33:49,055 | INFO     | ..............................
[2025-06-03 23:34:20] 2025-06-03 21:33:49,160 | INFO     | 
[2025-06-03 23:34:20] 2025-06-03 21:33:49,160 | INFO     | job summary report
[2025-06-03 23:34:20] 2025-06-03 21:33:49,161 | INFO     | --------------------------------------------------
[2025-06-03 23:34:20] 2025-06-03 21:33:49,161 | INFO     | PanDA job id: 6669511769
[2025-06-03 23:34:20] 2025-06-03 21:33:49,161 | INFO     | task id: 44871837
[2025-06-03 23:34:20] 2025-06-03 21:33:49,161 | INFO     | errors: (none)
[2025-06-03 23:34:20] 2025-06-03 21:33:49,161 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:34:20] 2025-06-03 21:33:49,161 | INFO     | pilot state: finished 
[2025-06-03 23:34:20] 2025-06-03 21:33:49,161 | INFO     | transexitcode: 0
[2025-06-03 23:34:20] 2025-06-03 21:33:49,161 | INFO     | exeerrorcode: 0
[2025-06-03 23:34:20] 2025-06-03 21:33:49,161 | INFO     | exeerrordiag: 
[2025-06-03 23:34:20] 2025-06-03 21:33:49,161 | INFO     | exitcode: 0
[2025-06-03 23:34:20] 2025-06-03 21:33:49,161 | INFO     | exitmsg: OK
[2025-06-03 23:34:20] 2025-06-03 21:33:49,161 | INFO     | cpuconsumptiontime: 46001 s
[2025-06-03 23:34:20] 2025-06-03 21:33:49,161 | INFO     | nevents: 400
[2025-06-03 23:34:20] 2025-06-03 21:33:49,161 | INFO     | neventsw: 0
[2025-06-03 23:34:20] 2025-06-03 21:33:49,161 | INFO     | pid: 3295331
[2025-06-03 23:34:20] 2025-06-03 21:33:49,162 | INFO     | pgrp: 3295331
[2025-06-03 23:34:20] 2025-06-03 21:33:49,162 | INFO     | corecount: 4
[2025-06-03 23:34:20] 2025-06-03 21:33:49,162 | INFO     | event service: False
[2025-06-03 23:34:20] 2025-06-03 21:33:49,162 | INFO     | sizes: {0: 2405074, 1: 2405273, 8: 2405479, 11: 2405507, 12021: 2435317, 12022: 2435316, 12024: 2444465, 12028: 2444521, 12037: 2444691}
[2025-06-03 23:34:20] 2025-06-03 21:33:49,162 | INFO     | --------------------------------------------------
[2025-06-03 23:34:20] 2025-06-03 21:33:49,162 | INFO     | 
[2025-06-03 23:34:20] 2025-06-03 21:33:49,162 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2025-06-03 23:34:20] 2025-06-03 21:33:49,191 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:34:20] 2025-06-03 21:33:49,192 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:34:20] 2025-06-03 21:33:49,192 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:34:20] 2025-06-03 21:33:49,192 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:34:20] 2025-06-03 21:33:49,192 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:34:20] 2025-06-03 21:33:49,192 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:34:20] 2025-06-03 21:33:49,192 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:34:20] 2025-06-03 21:33:49,192 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:34:20] 2025-06-03 21:33:49,192 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:34:20] 2025-06-03 21:33:49,192 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:34:20] 2025-06-03 21:33:49,193 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:34:20] 2025-06-03 21:33:49,193 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:34:20] 2025-06-03 21:33:49,193 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:34:20] 2025-06-03 21:33:49,193 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:34:20] 2025-06-03 21:33:49,193 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:34:20] 2025-06-03 21:33:49,193 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:34:20] 2025-06-03 21:33:49,193 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:34:20] 2025-06-03 21:33:49,193 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:34:20] 2025-06-03 21:33:49,193 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:34:20] 2025-06-03 21:33:49,193 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:34:20] 2025-06-03 21:33:49,194 | INFO     | job 6669511769 has completed (purged errors)
[2025-06-03 23:34:20] 2025-06-03 21:33:49,194 | INFO     | overall cleanup function is called
[2025-06-03 23:34:20] 2025-06-03 21:33:50,203 | INFO     | --- collectZombieJob: --- 10, [3295331]
[2025-06-03 23:34:20] 2025-06-03 21:33:50,203 | INFO     | zombie collector waiting for pid 3295331
[2025-06-03 23:34:20] 2025-06-03 21:33:50,203 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:34:20] 2025-06-03 21:33:50,203 | INFO     | collected zombie processes
[2025-06-03 23:34:20] 2025-06-03 21:33:50,203 | INFO     | will attempt to kill all subprocesses of pid=3295331
[2025-06-03 23:34:20] 2025-06-03 21:33:50,945 | INFO     | process IDs to be killed: [3295331] (in reverse order)
[2025-06-03 23:34:20] 2025-06-03 21:33:51,201 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:34:20] 2025-06-03 21:33:51,201 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:34:20] 2025-06-03 21:33:51,233 | INFO     | did not find any defunct processes belonging to 3295331
[2025-06-03 23:34:20] 2025-06-03 21:33:51,261 | INFO     | did not find any defunct processes belonging to 3295331
[2025-06-03 23:34:20] 2025-06-03 21:33:51,261 | INFO     | ready for new job
[2025-06-03 23:34:20] 2025-06-03 21:33:51,261 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:34:20] 2025-06-03 21:33:51,264 | INFO     | **************************************
[2025-06-03 23:34:20] 2025-06-03 21:33:51,264 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:34:20] 2025-06-03 21:33:51,264 | INFO     | **************************************
[2025-06-03 23:34:20] 2025-06-03 21:33:51,264 | INFO     | 
[2025-06-03 23:34:20] 2025-06-03 21:33:51,273 | INFO     | architecture information:
[2025-06-03 23:34:20] 2025-06-03 21:33:51,273 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:34:20] 2025-06-03 21:33:51,296 | INFO     | cat /etc/os-release:
[2025-06-03 23:34:20] NAME="CentOS Linux"
[2025-06-03 23:34:20] VERSION="7 (Core)"
[2025-06-03 23:34:20] ID="centos"
[2025-06-03 23:34:20] ID_LIKE="rhel fedora"
[2025-06-03 23:34:20] VERSION_ID="7"
[2025-06-03 23:34:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:34:20] ANSI_COLOR="0;31"
[2025-06-03 23:34:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:34:20] HOME_URL="https://www.centos.org/"
[2025-06-03 23:34:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:34:20] 
[2025-06-03 23:34:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:34:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:34:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:34:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:34:20] 
[2025-06-03 23:34:20] 2025-06-03 21:33:51,297 | INFO     | **************************************
[2025-06-03 23:34:20] 2025-06-03 21:33:51,800 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2025-06-03 23:34:20] 2025-06-03 21:33:51,824 | INFO     | sufficient remaining disk space (3231299141632 B)
[2025-06-03 23:34:20] 2025-06-03 21:33:51,824 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:34:20] 2025-06-03 21:33:51,824 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:34:20] 2025-06-03 21:33:51,824 | INFO     | update_server=False
[2025-06-03 23:34:20] 2025-06-03 21:33:51,825 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:34:20] 2025-06-03 21:33:51,825 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:34:20] 2025-06-03 21:33:51,825 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:34:20] 2025-06-03 21:33:51,826 | INFO     | aborting loop
[2025-06-03 23:34:20] 2025-06-03 21:33:51,917 | INFO     | all data control threads have been joined
[2025-06-03 23:34:20] 2025-06-03 21:33:52,310 | INFO     | all payload control threads have been joined
[2025-06-03 23:34:20] 2025-06-03 21:33:52,478 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:34:20] 2025-06-03 21:33:52,479 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:34:20] 2025-06-03 21:33:52,479 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:34:20] 2025-06-03 21:33:52,531 | INFO     | all job control threads have been joined
[2025-06-03 23:34:20] 2025-06-03 21:33:52,826 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:34:20] 2025-06-03 21:33:52,831 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:34:20] 2025-06-03 21:33:52,922 | INFO     | [data] control thread has finished
[2025-06-03 23:34:20] 2025-06-03 21:33:52,969 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:34:20] 2025-06-03 21:33:53,110 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:34:20] 2025-06-03 21:33:53,268 | INFO     | [job] validate thread has finished
[2025-06-03 23:34:20] 2025-06-03 21:33:53,315 | INFO     | [payload] control thread has finished
[2025-06-03 23:34:20] 2025-06-03 21:33:53,533 | INFO     | [job] control thread has finished
[2025-06-03 23:34:20] 2025-06-03 21:33:53,585 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:34:20] 2025-06-03 21:33:53,789 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:34:20] 2025-06-03 21:33:53,832 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:34:20] 2025-06-03 21:33:53,899 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:34:20] 2025-06-03 21:33:54,072 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:34:20] 2025-06-03 21:33:54,088 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:34:20] 2025-06-03 21:33:54,171 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:34:20] 2025-06-03 21:33:54,344 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:34:20] 2025-06-03 21:33:55,176 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:34:20] 2025-06-03 21:33:58,350 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:34:20] 2025-06-03 21:33:59,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22601821153088)>', '<ExcThread(monitor, started 22601512486656)>']
[2025-06-03 23:34:20] 2025-06-03 21:34:00,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:34:20] 2025-06-03 21:34:00,513 | INFO     | [monitor] control thread has ended
[2025-06-03 23:34:20] 2025-06-03 21:34:04,967 | INFO     | all workflow threads have been joined
[2025-06-03 23:34:20] 2025-06-03 21:34:04,968 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:34:20] 2025-06-03 21:34:04,968 | INFO     | traces error code: 0
[2025-06-03 23:34:20] 2025-06-03 21:34:04,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:34:20] 2025-06-03 21:34:05,124 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:34:20] 2025-06-03 21:34:05,130 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:34:20] 2025-06-03 21:34:05,134 [wrapper] pilotpid: 3266149
[2025-06-03 23:34:20] 2025-06-03 21:34:05,138 [wrapper] Pilot exit status: 0
[2025-06-03 23:34:20] 2025-06-03 21:34:05,153 [wrapper] pandaids: 6669511769
[2025-06-03 23:34:20] 2025-06-03 21:34:05,304 [wrapper] cleanup supervisor_pilot 3909882 3266150
[2025-06-03 23:34:20] 2025-06-03 21:34:05,311 [wrapper] Test setup, not cleaning
[2025-06-03 23:34:20] 2025-06-03 21:34:05,316 [wrapper] apfmon messages muted
[2025-06-03 23:34:20] 2025-06-03 21:34:05,320 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:34:20] 2025-06-03 21:34:05,324 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:34:20]  *** Error codes and diagnostics ***
[2025-06-03 23:34:20]     "exeErrorCode": 0,
[2025-06-03 23:34:20]     "exeErrorDiag": "",
[2025-06-03 23:34:20]     "pilotErrorCode": 0,
[2025-06-03 23:34:20]     "pilotErrorDiag": "",
[2025-06-03 23:34:20]  *** Listing of results directory ***
[2025-06-03 23:34:20] total 415120
[2025-06-03 23:34:20] -rw-r--r-- 1 boinc boinc    495897 May 29 09:22 pilot3.tar.gz
[2025-06-03 23:34:20] -rwx------ 1 boinc boinc     37140 May 29 09:31 runpilot2-wrapper.sh
[2025-06-03 23:34:20] -rw-r--r-- 1 boinc boinc      5111 May 29 09:31 queuedata.json
[2025-06-03 23:34:20] -rw-r--r-- 1 boinc boinc       100 Jun  3 20:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:34:20] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 20:12 run_atlas
[2025-06-03 23:34:20] -rw-r--r-- 1 boinc boinc       105 Jun  3 20:12 job.xml
[2025-06-03 23:34:20] -rw-r--r-- 2 boinc boinc 222422488 Jun  3 20:12 EVNT.44871834._003817.pool.root.1
[2025-06-03 23:34:20] -rw-r--r-- 1 boinc boinc      6687 Jun  3 20:12 init_data.xml
[2025-06-03 23:34:20] -rw-r--r-- 2 boinc boinc     15093 Jun  3 20:12 start_atlas.sh
[2025-06-03 23:34:20] drwxrwx--x 2 boinc boinc      4096 Jun  3 20:12 shared
[2025-06-03 23:34:20] -rw-r--r-- 2 boinc boinc    508873 Jun  3 20:12 input.tar.gz
[2025-06-03 23:34:20] -rw-r--r-- 1 boinc boinc         0 Jun  3 20:12 boinc_lockfile
[2025-06-03 23:34:20] -rw-r--r-- 1 boinc boinc      2558 Jun  3 20:12 pandaJob.out
[2025-06-03 23:34:20] -rw------- 1 boinc boinc    985078 Jun  3 20:12 agis_schedconf.cvmfs.json
[2025-06-03 23:34:20] drwx------ 4 boinc boinc      4096 Jun  3 20:12 pilot3
[2025-06-03 23:34:20] -rw------- 1 boinc boinc 195932901 Jun  3 23:32 HITS.44871837._096936.pool.root.1
[2025-06-03 23:34:20] -rw-r--r-- 1 boinc boinc       529 Jun  3 23:33 boinc_task_state.xml
[2025-06-03 23:34:20] -rw------- 1 boinc boinc      1032 Jun  3 23:33 memory_monitor_summary.json
[2025-06-03 23:34:20] -rw------- 1 boinc boinc   1603667 Jun  3 23:33 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:34:20] -rw------- 1 boinc boinc    328127 Jun  3 23:33 log.44871837._096936.job.log.tgz.1
[2025-06-03 23:34:20] -rw------- 1 boinc boinc        95 Jun  3 23:33 pilot_heartbeat.json
[2025-06-03 23:34:20] -rw------- 1 boinc boinc      7710 Jun  3 23:33 heartbeat.json
[2025-06-03 23:34:20] -rw------- 1 boinc boinc      4365 Jun  3 23:34 pilotlog.txt
[2025-06-03 23:34:20] -rw------- 1 boinc boinc   1113204 Jun  3 23:34 log.44871837._096936.job.log.1
[2025-06-03 23:34:20] -rw------- 1 boinc boinc       357 Jun  3 23:34 output.list
[2025-06-03 23:34:20] -rw-r--r-- 1 boinc boinc       620 Jun  3 23:34 runtime_log
[2025-06-03 23:34:20] -rw------- 1 boinc boinc   1464320 Jun  3 23:34 result.tar.gz
[2025-06-03 23:34:20] -rw-r--r-- 1 boinc boinc      9041 Jun  3 23:34 runtime_log.err
[2025-06-03 23:34:20] -rw------- 1 boinc boinc       666 Jun  3 23:34 QygMDmZume7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmE5dKDmQE4Xin.diag
[2025-06-03 23:34:20] -rw-r--r-- 1 boinc boinc        27 Jun  3 23:34 wrapper_checkpoint.txt
[2025-06-03 23:34:20] -rw-r--r-- 1 boinc boinc      8192 Jun  3 23:34 boinc_mmap_file
[2025-06-03 23:34:20] -rw-r--r-- 1 boinc boinc     20987 Jun  3 23:34 stderr.txt
[2025-06-03 23:34:20] HITS file was successfully produced:
[2025-06-03 23:34:20] -rw------- 1 boinc boinc 195932901 Jun  3 23:32 shared/HITS.pool.root.1
[2025-06-03 23:34:20]  *** Contents of shared directory: ***
[2025-06-03 23:34:20] total 410512
[2025-06-03 23:34:20] -rw-r--r-- 2 boinc boinc 222422488 Jun  3 20:12 ATLAS.root_0
[2025-06-03 23:34:20] -rw-r--r-- 2 boinc boinc     15093 Jun  3 20:12 start_atlas.sh
[2025-06-03 23:34:20] -rw-r--r-- 2 boinc boinc    508873 Jun  3 20:12 input.tar.gz
[2025-06-03 23:34:20] -rw------- 1 boinc boinc 195932901 Jun  3 23:32 HITS.pool.root.1
[2025-06-03 23:34:20] -rw------- 1 boinc boinc   1464320 Jun  3 23:34 result.tar.gz
23:34:21 (3256064): run_atlas exited; CPU time 46731.190446
23:34:21 (3256064): called boinc_finish(0)

</stderr_txt>
]]>

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