Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:04:48 (3602682): wrapper (7.7.26015): starting
17:04:48 (3602682): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 17:04:48] Arguments: --nthreads 4
[2025-06-04 17:04:48] Threads: 4
[2025-06-04 17:04:48] Checking for CVMFS
[2025-06-04 17:04:48] No cvmfs_config command found, will try listing directly
[2025-06-04 17:04:48] CVMFS is ok
[2025-06-04 17:04:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 17:04:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 17:04:48] Further information can be found at the LHC@home message board.
[2025-06-04 17:04:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:04:48] Checking for apptainer binary...
[2025-06-04 17:04:48] which: no apptainer in ((null))
[2025-06-04 17:04:48] apptainer is not installed, using version from CVMFS
[2025-06-04 17:04:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:04:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-06-04 17:04:48] apptainer works
[2025-06-04 17:04:49] Set ATHENA_PROC_NUMBER=4
[2025-06-04 17:04:49] Set ATHENA_CORE_NUMBER=4
[2025-06-04 17:04:49] Starting ATLAS job with PandaID=6668863579
[2025-06-04 17:04:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 22:01:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 22:01:41] 2025-06-04 19:58:14,010 | INFO     | extracted standard info from prmon json
[2025-06-04 22:01:41] 2025-06-04 19:58:14,011 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 22:01:41] 2025-06-04 19:58:14,011 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 22:01:41] 2025-06-04 19:58:14,012 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 22:01:41] 2025-06-04 19:58:14,012 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 22:01:41] 2025-06-04 19:58:14,018 | INFO     | fitting pss+swap vs Time
[2025-06-04 22:01:41] 2025-06-04 19:58:14,019 | INFO     | sum of square deviations: 7407141672.0
[2025-06-04 22:01:41] 2025-06-04 19:58:14,022 | INFO     | sum of deviations: 31737268093.500004
[2025-06-04 22:01:41] 2025-06-04 19:58:14,022 | INFO     | mean x: 1749058278.5
[2025-06-04 22:01:41] 2025-06-04 19:58:14,022 | INFO     | mean y: 2332703.954861111
[2025-06-04 22:01:41] 2025-06-04 19:58:14,022 | INFO     | sufficient remaining disk space (1656398807040 B)
[2025-06-04 22:01:41] 2025-06-04 19:58:14,023 | INFO     | -- intersect: -7491830895.716343
[2025-06-04 22:01:41] 2025-06-04 19:58:14,023 | INFO     | intersect: -7491830895.716343
[2025-06-04 22:01:41] 2025-06-04 19:58:14,023 | INFO     | chi2: 1.7859255453153031
[2025-06-04 22:01:41] 2025-06-04 19:58:14,023 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 22:01:41] 2025-06-04 19:58:14,024 | INFO     | sum of square deviations: 7028008982.0
[2025-06-04 22:01:41] 2025-06-04 19:58:14,027 | INFO     | sum of deviations: 30716714822.000004
[2025-06-04 22:01:41] 2025-06-04 19:58:14,027 | INFO     | mean x: 1749058126.0
[2025-06-04 22:01:41] 2025-06-04 19:58:14,027 | INFO     | mean y: 2332293.413427562
[2025-06-04 22:01:41] 2025-06-04 19:58:14,027 | INFO     | -- intersect: -7642125731.760415
[2025-06-04 22:01:41] 2025-06-04 19:58:14,027 | INFO     | intersect: -7642125731.760415
[2025-06-04 22:01:41] 2025-06-04 19:58:14,028 | INFO     | chi2: 1.786478395054369
[2025-06-04 22:01:41] 2025-06-04 19:58:14,028 | INFO     | current chi2=1.786478395054369 (change=-0.030955923135546 %)
[2025-06-04 22:01:41] 2025-06-04 19:58:14,028 | INFO     | right removable region: 282
[2025-06-04 22:01:41] 2025-06-04 19:58:14,029 | INFO     | sum of square deviations: 7028008982.0
[2025-06-04 22:01:41] 2025-06-04 19:58:14,031 | INFO     | sum of deviations: -15394630755.999998
[2025-06-04 22:01:41] 2025-06-04 19:58:14,032 | INFO     | mean x: 1749058431.0
[2025-06-04 22:01:41] 2025-06-04 19:58:14,032 | INFO     | mean y: 2351537.6077738516
[2025-06-04 22:01:41] 2025-06-04 19:58:14,032 | INFO     | -- intersect: 3833608552.912724
[2025-06-04 22:01:41] 2025-06-04 19:58:14,032 | INFO     | intersect: 3833608552.912724
[2025-06-04 22:01:41] 2025-06-04 19:58:14,033 | INFO     | chi2: 0.16320970050374561
[2025-06-04 22:01:41] 2025-06-04 19:58:14,033 | INFO     | current chi2=0.16320970050374561 (change=90.86133792464841 %)
[2025-06-04 22:01:41] 2025-06-04 19:58:14,034 | INFO     | sum of square deviations: 6662039329.5
[2025-06-04 22:01:41] 2025-06-04 19:58:14,036 | INFO     | sum of deviations: -9978898957.499996
[2025-06-04 22:01:41] 2025-06-04 19:58:14,036 | INFO     | mean x: 1749058583.5
[2025-06-04 22:01:41] 2025-06-04 19:58:14,036 | INFO     | mean y: 2349263.5935251797
[2025-06-04 22:01:41] 2025-06-04 19:58:14,036 | INFO     | -- intersect: 2622219548.3888125
[2025-06-04 22:01:41] 2025-06-04 19:58:14,037 | INFO     | intersect: 2622219548.3888125
[2025-06-04 22:01:41] 2025-06-04 19:58:14,037 | INFO     | chi2: 0.142379836961793
[2025-06-04 22:01:41] 2025-06-04 19:58:14,037 | INFO     | current chi2=0.142379836961793 (change=12.762638175097067 %)
[2025-06-04 22:01:41] 2025-06-04 19:58:14,038 | INFO     | left removable region: 20
[2025-06-04 22:01:41] 2025-06-04 19:58:14,038 | INFO     | sum of square deviations: 5576683165.5
[2025-06-04 22:01:41] 2025-06-04 19:58:14,040 | INFO     | sum of deviations: 7411632919.0
[2025-06-04 22:01:41] 2025-06-04 19:58:14,040 | INFO     | mean x: 1749058705.5
[2025-06-04 22:01:41] 2025-06-04 19:58:14,041 | INFO     | mean y: 2341047.4427480916
[2025-06-04 22:01:41] 2025-06-04 19:58:14,041 | INFO     | -- intersect: -2322227283.6299105
[2025-06-04 22:01:41] 2025-06-04 19:58:14,041 | INFO     | intersect: -2322227283.6299105
[2025-06-04 22:01:41] 2025-06-04 19:58:14,041 | INFO     | chi2: 0.0014059765171093002
[2025-06-04 22:01:41] 2025-06-04 19:58:14,042 | INFO     | -- intersect: -2322227283.6299105
[2025-06-04 22:01:41] 2025-06-04 19:58:14,042 | INFO     | current memory leak: 1.33 B/s (using 262 data points, chi2=0.00)
[2025-06-04 22:01:41] 2025-06-04 19:58:14,043 | INFO     | ..............................
[2025-06-04 22:01:41] 2025-06-04 19:58:14,043 | INFO     | . Timing measurements:
[2025-06-04 22:01:41] 2025-06-04 19:58:14,043 | INFO     | . get job = 0 s
[2025-06-04 22:01:41] 2025-06-04 19:58:14,043 | INFO     | . initial setup = 1 s
[2025-06-04 22:01:41] 2025-06-04 19:58:14,043 | INFO     | . payload setup = 6 s
[2025-06-04 22:01:41] 2025-06-04 19:58:14,044 | INFO     | . stage-in = 0 s
[2025-06-04 22:01:41] 2025-06-04 19:58:14,044 | INFO     | . payload execution = 17562 s
[2025-06-04 22:01:41] 2025-06-04 19:58:14,044 | INFO     | . stage-out = 1 s
[2025-06-04 22:01:41] 2025-06-04 19:58:14,044 | INFO     | . log creation = 0 s
[2025-06-04 22:01:41] 2025-06-04 19:58:14,044 | INFO     | ..............................
[2025-06-04 22:01:41] 2025-06-04 19:58:14,045 | INFO     | size of work directory /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6668863579: 2940227 B (within 2537553920 B limit)
[2025-06-04 22:01:41] 2025-06-04 19:58:14,045 | INFO     | pfn file=/scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6668863579/HITS.44871837._089982.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 22:01:41] 2025-06-04 19:58:14,045 | INFO     | total size of present files: 0 B (workdir size: 2940227 B)
[2025-06-04 22:01:41] 2025-06-04 19:58:14,046 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6668863579/HITS.44871837._089982.pool.root.1 since it does not exist
[2025-06-04 22:01:41] 2025-06-04 19:58:14,158 | INFO     | 
[2025-06-04 22:01:41] 2025-06-04 19:58:14,159 | INFO     | job summary report
[2025-06-04 22:01:41] 2025-06-04 19:58:14,159 | INFO     | --------------------------------------------------
[2025-06-04 22:01:41] 2025-06-04 19:58:14,160 | INFO     | PanDA job id: 6668863579
[2025-06-04 22:01:41] 2025-06-04 19:58:14,160 | INFO     | task id: 44871837
[2025-06-04 22:01:41] 2025-06-04 19:58:14,160 | INFO     | errors: (none)
[2025-06-04 22:01:41] 2025-06-04 19:58:14,160 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 22:01:41] 2025-06-04 19:58:14,160 | INFO     | pilot state: finished 
[2025-06-04 22:01:41] 2025-06-04 19:58:14,160 | INFO     | transexitcode: 0
[2025-06-04 22:01:41] 2025-06-04 19:58:14,160 | INFO     | exeerrorcode: 0
[2025-06-04 22:01:41] 2025-06-04 19:58:14,160 | INFO     | exeerrordiag: 
[2025-06-04 22:01:41] 2025-06-04 19:58:14,161 | INFO     | exitcode: 0
[2025-06-04 22:01:41] 2025-06-04 19:58:14,161 | INFO     | exitmsg: OK
[2025-06-04 22:01:41] 2025-06-04 19:58:14,161 | INFO     | cpuconsumptiontime: 66646 s
[2025-06-04 22:01:41] 2025-06-04 19:58:14,161 | INFO     | nevents: 400
[2025-06-04 22:01:41] 2025-06-04 19:58:14,161 | INFO     | neventsw: 0
[2025-06-04 22:01:41] 2025-06-04 19:58:14,161 | INFO     | pid: 3613529
[2025-06-04 22:01:41] 2025-06-04 19:58:14,161 | INFO     | pgrp: 3613529
[2025-06-04 22:01:41] 2025-06-04 19:58:14,162 | INFO     | corecount: 4
[2025-06-04 22:01:41] 2025-06-04 19:58:14,162 | INFO     | event service: False
[2025-06-04 22:01:41] 2025-06-04 19:58:14,162 | INFO     | sizes: {0: 2397181, 1: 2397380, 5: 2397586, 12: 2397642, 17573: 2429493, 17575: 2438640, 17581: 2438782}
[2025-06-04 22:01:41] 2025-06-04 19:58:14,162 | INFO     | --------------------------------------------------
[2025-06-04 22:01:41] 2025-06-04 19:58:14,162 | INFO     | 
[2025-06-04 22:01:41] 2025-06-04 19:58:14,162 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-04 22:01:41] 2025-06-04 19:58:14,179 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 22:01:41] 2025-06-04 19:58:14,179 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 22:01:41] 2025-06-04 19:58:14,179 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 22:01:41] 2025-06-04 19:58:14,179 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 22:01:41] 2025-06-04 19:58:14,180 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 22:01:41] 2025-06-04 19:58:14,180 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 22:01:41] 2025-06-04 19:58:14,180 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 22:01:41] 2025-06-04 19:58:14,180 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 22:01:41] 2025-06-04 19:58:14,180 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 22:01:41] 2025-06-04 19:58:14,181 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 22:01:41] 2025-06-04 19:58:14,181 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 22:01:41] 2025-06-04 19:58:14,181 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 22:01:41] 2025-06-04 19:58:14,181 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 22:01:41] 2025-06-04 19:58:14,181 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 22:01:41] 2025-06-04 19:58:14,181 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 22:01:41] 2025-06-04 19:58:14,182 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 22:01:41] 2025-06-04 19:58:14,182 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 22:01:41] 2025-06-04 19:58:14,182 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 22:01:41] 2025-06-04 19:58:14,182 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 22:01:41] 2025-06-04 19:58:14,182 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 22:01:41] 2025-06-04 19:58:14,182 | INFO     | job 6668863579 has completed (purged errors)
[2025-06-04 22:01:41] 2025-06-04 19:58:14,183 | INFO     | overall cleanup function is called
[2025-06-04 22:01:41] 2025-06-04 19:58:14,446 | INFO     | number of running child processes to parent process 3613529: 1
[2025-06-04 22:01:41] 2025-06-04 19:58:14,446 | INFO     | maximum number of monitored processes: 6
[2025-06-04 22:01:41] 2025-06-04 19:58:14,446 | INFO     | aborting job monitoring since job object (job id=6668863579) has expired
[2025-06-04 22:01:41] 2025-06-04 19:58:15,192 | INFO     | --- collectZombieJob: --- 10, [3613529]
[2025-06-04 22:01:41] 2025-06-04 19:58:15,192 | INFO     | zombie collector waiting for pid 3613529
[2025-06-04 22:01:41] 2025-06-04 19:58:15,192 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 22:01:41] 2025-06-04 19:58:15,193 | INFO     | collected zombie processes
[2025-06-04 22:01:41] 2025-06-04 19:58:15,193 | INFO     | will attempt to kill all subprocesses of pid=3613529
[2025-06-04 22:01:41] 2025-06-04 19:58:15,495 | INFO     | process IDs to be killed: [3613529] (in reverse order)
[2025-06-04 22:01:41] 2025-06-04 19:58:15,565 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 22:01:41] 2025-06-04 19:58:15,566 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 22:01:41] 2025-06-04 19:58:15,573 | INFO     | did not find any defunct processes belonging to 3613529
[2025-06-04 22:01:41] 2025-06-04 19:58:15,580 | INFO     | did not find any defunct processes belonging to 3613529
[2025-06-04 22:01:41] 2025-06-04 19:58:15,581 | INFO     | ready for new job
[2025-06-04 22:01:41] 2025-06-04 19:58:15,581 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 22:01:41] 2025-06-04 19:58:15,583 | INFO     | **************************************
[2025-06-04 22:01:41] 2025-06-04 19:58:15,583 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 22:01:41] 2025-06-04 19:58:15,583 | INFO     | **************************************
[2025-06-04 22:01:41] 2025-06-04 19:58:15,583 | INFO     | 
[2025-06-04 22:01:41] 2025-06-04 19:58:15,586 | INFO     | architecture information:
[2025-06-04 22:01:41] 2025-06-04 19:58:15,586 | INFO     | executing command: cat /etc/os-release
[2025-06-04 22:01:41] 2025-06-04 19:58:15,598 | INFO     | cat /etc/os-release:
[2025-06-04 22:01:41] NAME="CentOS Linux"
[2025-06-04 22:01:41] VERSION="7 (Core)"
[2025-06-04 22:01:41] ID="centos"
[2025-06-04 22:01:41] ID_LIKE="rhel fedora"
[2025-06-04 22:01:41] VERSION_ID="7"
[2025-06-04 22:01:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 22:01:41] ANSI_COLOR="0;31"
[2025-06-04 22:01:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 22:01:41] HOME_URL="https://www.centos.org/"
[2025-06-04 22:01:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 22:01:41] 
[2025-06-04 22:01:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 22:01:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 22:01:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 22:01:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 22:01:41] 
[2025-06-04 22:01:41] 2025-06-04 19:58:15,598 | INFO     | **************************************
[2025-06-04 22:01:41] 2025-06-04 19:58:16,101 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-04 22:01:41] 2025-06-04 19:58:16,113 | INFO     | sufficient remaining disk space (1656404049920 B)
[2025-06-04 22:01:41] 2025-06-04 19:58:16,113 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 22:01:41] 2025-06-04 19:58:16,113 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 22:01:41] 2025-06-04 19:58:16,114 | INFO     | update_server=False
[2025-06-04 22:01:41] 2025-06-04 19:58:16,114 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 22:01:41] 2025-06-04 19:58:16,114 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 22:01:41] 2025-06-04 19:58:16,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 22:01:41] 2025-06-04 19:58:16,114 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:01:41] 2025-06-04 19:58:16,115 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:01:41] 2025-06-04 19:58:16,116 | INFO     | aborting loop
[2025-06-04 22:01:41] 2025-06-04 19:58:16,115 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 22:01:41] 2025-06-04 19:58:16,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 22:01:41] 2025-06-04 19:58:16,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 22:01:41] 2025-06-04 19:58:16,133 | INFO     | all job control threads have been joined
[2025-06-04 22:01:41] 2025-06-04 19:58:16,595 | INFO     | all data control threads have been joined
[2025-06-04 22:01:41] 2025-06-04 19:58:17,115 | INFO     | [job] retrieve thread has finished
[2025-06-04 22:01:41] 2025-06-04 19:58:17,120 | INFO     | [job] queue monitor thread has finished
[2025-06-04 22:01:41] 2025-06-04 19:58:17,121 | INFO     | [job] job monitor thread has finished
[2025-06-04 22:01:41] 2025-06-04 19:58:17,138 | INFO     | [job] control thread has finished
[2025-06-04 22:01:41] 2025-06-04 19:58:17,146 | INFO     | all payload control threads have been joined
[2025-06-04 22:01:41] 2025-06-04 19:58:17,433 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 22:01:41] 2025-06-04 19:58:17,499 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 22:01:41] 2025-06-04 19:58:17,600 | INFO     | [data] control thread has finished
[2025-06-04 22:01:41] 2025-06-04 19:58:17,605 | INFO     | [data] copytool_in thread has finished
[2025-06-04 22:01:41] 2025-06-04 19:58:17,792 | INFO     | [payload] failed_post thread has finished
[2025-06-04 22:01:41] 2025-06-04 19:58:18,121 | INFO     | [data] copytool_out thread has finished
[2025-06-04 22:01:41] 2025-06-04 19:58:18,152 | INFO     | [payload] control thread has finished
[2025-06-04 22:01:41] 2025-06-04 19:58:18,298 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 22:01:41] 2025-06-04 19:58:18,299 | INFO     | [job] validate thread has finished
[2025-06-04 22:01:41] 2025-06-04 19:58:18,484 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 22:01:41] 2025-06-04 19:58:18,593 | INFO     | [payload] validate_post thread has finished
[2025-06-04 22:01:41] 2025-06-04 19:58:19,003 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 22:01:41] 2025-06-04 19:58:23,009 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 22:01:41] 2025-06-04 19:58:24,987 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22872808716096)>', '<ExcThread(monitor, started 22872502281984)>']
[2025-06-04 22:01:41] 2025-06-04 19:58:25,151 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 22:01:41] 2025-06-04 19:58:25,151 | INFO     | [monitor] control thread has ended
[2025-06-04 22:01:41] 2025-06-04 19:58:30,003 | INFO     | all workflow threads have been joined
[2025-06-04 22:01:41] 2025-06-04 19:58:30,003 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 22:01:41] 2025-06-04 19:58:30,003 | INFO     | traces error code: 0
[2025-06-04 22:01:41] 2025-06-04 19:58:30,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 22:01:41] 2025-06-04 19:58:30,124 [wrapper] ==== pilot stdout END ====
[2025-06-04 22:01:41] 2025-06-04 19:58:30,127 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 22:01:41] 2025-06-04 19:58:30,129 [wrapper] pilotpid: 3606286
[2025-06-04 22:01:41] 2025-06-04 19:58:30,131 [wrapper] Pilot exit status: 0
[2025-06-04 22:01:41] 2025-06-04 19:58:30,140 [wrapper] pandaids: 6668863579
[2025-06-04 22:01:41] 2025-06-04 19:58:30,188 [wrapper] cleanup supervisor_pilot 3897933 3606287
[2025-06-04 22:01:41] 2025-06-04 19:58:30,191 [wrapper] Test setup, not cleaning
[2025-06-04 22:01:41] 2025-06-04 19:58:30,193 [wrapper] apfmon messages muted
[2025-06-04 22:01:41] 2025-06-04 19:58:30,196 [wrapper] ==== wrapper stdout END ====
[2025-06-04 22:01:41] 2025-06-04 19:58:30,198 [wrapper] ==== wrapper stderr END ====
[2025-06-04 22:01:41]  *** Error codes and diagnostics ***
[2025-06-04 22:01:41]     "exeErrorCode": 0,
[2025-06-04 22:01:41]     "exeErrorDiag": "",
[2025-06-04 22:01:41]     "pilotErrorCode": 0,
[2025-06-04 22:01:41]     "pilotErrorDiag": "",
[2025-06-04 22:01:41]  *** Listing of results directory ***
[2025-06-04 22:01:41] total 427796
[2025-06-04 22:01:41] -rw-r--r-- 1 boinc boinc    495897 May 28 22:14 pilot3.tar.gz
[2025-06-04 22:01:41] -rwx------ 1 boinc boinc     37140 May 28 22:33 runpilot2-wrapper.sh
[2025-06-04 22:01:41] -rw-r--r-- 1 boinc boinc      5111 May 28 22:33 queuedata.json
[2025-06-04 22:01:41] -rw-r--r-- 1 boinc boinc       100 Jun  4 17:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 22:01:41] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 17:04 run_atlas
[2025-06-04 22:01:41] -rw-r--r-- 1 boinc boinc       105 Jun  4 17:04 job.xml
[2025-06-04 22:01:41] -rw-r--r-- 1 boinc boinc      6419 Jun  4 17:04 init_data.xml
[2025-06-04 22:01:41] -rw-r--r-- 2 boinc boinc 224086852 Jun  4 17:04 EVNT.44871834._003501.pool.root.1
[2025-06-04 22:01:41] drwxrwx--x 2 boinc boinc      4096 Jun  4 17:04 shared
[2025-06-04 22:01:41] -rw-r--r-- 2 boinc boinc    508879 Jun  4 17:04 input.tar.gz
[2025-06-04 22:01:41] -rw-r--r-- 2 boinc boinc     15093 Jun  4 17:04 start_atlas.sh
[2025-06-04 22:01:41] -rw-r--r-- 1 boinc boinc         0 Jun  4 17:04 boinc_lockfile
[2025-06-04 22:01:41] -rw-r--r-- 1 boinc boinc      2558 Jun  4 17:04 pandaJob.out
[2025-06-04 22:01:41] -rw------- 1 boinc boinc    987207 Jun  4 17:04 agis_schedconf.cvmfs.json
[2025-06-04 22:01:41] drwx------ 4 boinc boinc      4096 Jun  4 17:04 pilot3
[2025-06-04 22:01:41] -rw-r--r-- 1 boinc boinc       529 Jun  4 21:57 boinc_task_state.xml
[2025-06-04 22:01:41] -rw------- 1 boinc boinc 206160367 Jun  4 21:57 HITS.44871837._089982.pool.root.1
[2025-06-04 22:01:41] -rw------- 1 boinc boinc        95 Jun  4 21:57 pilot_heartbeat.json
[2025-06-04 22:01:41] -rw------- 1 boinc boinc      1037 Jun  4 21:58 memory_monitor_summary.json
[2025-06-04 22:01:41] -rw------- 1 boinc boinc   1598969 Jun  4 21:58 agis_ddmendpoints.agis.ALL.json
[2025-06-04 22:01:41] -rw------- 1 boinc boinc    373375 Jun  4 21:58 log.44871837._089982.job.log.tgz.1
[2025-06-04 22:01:41] -rw------- 1 boinc boinc      7728 Jun  4 21:58 heartbeat.json
[2025-06-04 22:01:41] -rw------- 1 boinc boinc      4487 Jun  4 21:58 pilotlog.txt
[2025-06-04 22:01:41] -rw------- 1 boinc boinc   1619392 Jun  4 21:58 log.44871837._089982.job.log.1
[2025-06-04 22:01:41] -rw------- 1 boinc boinc       357 Jun  4 21:58 output.list
[2025-06-04 22:01:41] -rw-r--r-- 1 boinc boinc       620 Jun  4 21:58 runtime_log
[2025-06-04 22:01:41] -rw------- 1 boinc boinc   2007040 Jun  4 21:58 result.tar.gz
[2025-06-04 22:01:41] -rw-r--r-- 1 boinc boinc      9026 Jun  4 21:58 runtime_log.err
[2025-06-04 22:01:41] -rw------- 1 boinc boinc       665 Jun  4 21:58 kMPMDm5dce7n9Rq4apOajLDm4fhM0noT9bVof3QYDmB5TKDmrtPBdm.diag
[2025-06-04 22:01:41] -rw-r--r-- 1 boinc boinc        26 Jun  4 22:01 wrapper_checkpoint.txt
[2025-06-04 22:01:41] -rw-r--r-- 1 boinc boinc      8192 Jun  4 22:01 boinc_mmap_file
[2025-06-04 22:01:41] -rw-r--r-- 1 boinc boinc     21067 Jun  4 22:01 stderr.txt
[2025-06-04 22:01:41] HITS file was successfully produced:
[2025-06-04 22:01:41] -rw------- 1 boinc boinc 206160367 Jun  4 21:57 shared/HITS.pool.root.1
[2025-06-04 22:01:41]  *** Contents of shared directory: ***
[2025-06-04 22:01:41] total 422648
[2025-06-04 22:01:41] -rw-r--r-- 2 boinc boinc 224086852 Jun  4 17:04 ATLAS.root_0
[2025-06-04 22:01:41] -rw-r--r-- 2 boinc boinc    508879 Jun  4 17:04 input.tar.gz
[2025-06-04 22:01:41] -rw-r--r-- 2 boinc boinc     15093 Jun  4 17:04 start_atlas.sh
[2025-06-04 22:01:41] -rw------- 1 boinc boinc 206160367 Jun  4 21:57 HITS.pool.root.1
[2025-06-04 22:01:41] -rw------- 1 boinc boinc   2007040 Jun  4 21:58 result.tar.gz
22:01:43 (3602682): run_atlas exited; CPU time 67292.667669
22:01:43 (3602682): called boinc_finish(0)

</stderr_txt>
]]>

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