Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
17:34:48 (3242261): wrapper (7.7.26015): starting
17:34:48 (3242261): wrapper: running run_atlas (--nthreads 4)
[2025-05-29 17:34:48] Arguments: --nthreads 4
[2025-05-29 17:34:48] Threads: 4
[2025-05-29 17:34:48] Checking for CVMFS
[2025-05-29 17:34:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 17:34:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 17:34:49] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 17:34:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 17:34:49] 2.12.7.0 3393916 7606 97780 146567 0 56 7638644 10240001 1822 130560 0 22826562 99.997 1954099 741 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-05-29 17:34:49] CVMFS is ok
[2025-05-29 17:34:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 17:34:49] Checking for apptainer binary...
[2025-05-29 17:34:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 17:34:49] Running /usr/bin/apptainer --version
[2025-05-29 17:34:49] apptainer version 1.3.4
[2025-05-29 17:34:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 17:34:49] julianvlneu
[2025-05-29 17:34:49] apptainer works
[2025-05-29 17:34:49] Set ATHENA_PROC_NUMBER=4
[2025-05-29 17:34:49] Set ATHENA_CORE_NUMBER=4
[2025-05-29 17:34:49] Starting ATLAS job with PandaID=6669443883
[2025-05-29 17:34:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 18:39:51]  *** The last 200 lines of the pilot log: ***
[2025-05-29 18:39:51]  lfn=log.44871837._096645.job.log.tgz.1
[2025-05-29 18:39:51]  mtime=0
[2025-05-29 18:39:51]  protocol_id=None
[2025-05-29 18:39:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-29 18:39:51]  replicas=None
[2025-05-29 18:39:51]  scope=mc23_13p6TeV
[2025-05-29 18:39:51]  status=None
[2025-05-29 18:39:51]  status_code=0
[2025-05-29 18:39:51]  storage_token=
[2025-05-29 18:39:51]  surl=/var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6669443883/log.44871837._096645.job.log.tgz.1
[2025-05-29 18:39:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/e6/log.44871837._096645.job.log.tgz.1
[2025-05-29 18:39:51]  workdir=None
[2025-05-29 18:39:51] ]
[2025-05-29 18:39:51] 2025-05-29 16:39:23,042 | INFO     | transferring file log.44871837._096645.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6669443883/log.44871837._096645.job.log.tgz.1 to /var/li
[2025-05-29 18:39:51] 2025-05-29 16:39:23,042 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6669443883/log.44871837._096645.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-05-29 18:39:51] 2025-05-29 16:39:23,064 | INFO     | adding to output.list: log.44871837._096645.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/e6/log.44871837._096645.job.log.tg
[2025-05-29 18:39:51] 2025-05-29 16:39:23,065 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-29 18:39:51] 2025-05-29 16:39:23,065 | INFO     | summary of transferred files:
[2025-05-29 18:39:51] 2025-05-29 16:39:23,065 | INFO     |  -- lfn=log.44871837._096645.job.log.tgz.1, status_code=0, status=transferred
[2025-05-29 18:39:51] 2025-05-29 16:39:23,066 | INFO     | stage-out finished correctly
[2025-05-29 18:39:51] 2025-05-29 16:39:25,273 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-29 18:39:51] 2025-05-29 16:39:26,187 | INFO     | PID=3245997 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-29 18:39:51] 2025-05-29 16:39:26,187 | INFO     | .. there are 3 such processes running
[2025-05-29 18:39:51] 2025-05-29 16:39:27,253 | INFO     | job 6669443883 has state=finished
[2025-05-29 18:39:51] 2025-05-29 16:39:27,254 | INFO     | preparing for final server update for job 6669443883 in state='finished'
[2025-05-29 18:39:51] 2025-05-29 16:39:27,254 | INFO     | this job has now completed (state=finished)
[2025-05-29 18:39:51] 2025-05-29 16:39:27,254 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-29 18:39:51] 2025-05-29 16:39:27,254 | INFO     | log transfer has been attempted: DONE
[2025-05-29 18:39:51] 2025-05-29 16:39:27,254 | INFO     | job 6669443883 has finished - writing final server update
[2025-05-29 18:39:51] 2025-05-29 16:39:27,254 | INFO     | total number of processed events: 400 (read)
[2025-05-29 18:39:51] 2025-05-29 16:39:27,256 | INFO     | executing command: lscpu
[2025-05-29 18:39:51] 2025-05-29 16:39:27,280 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-29 18:39:51] 2025-05-29 16:39:27,997 | WARNING  | process 3252687 can no longer be monitored (due to stat problems) - aborting
[2025-05-29 18:39:51] 2025-05-29 16:39:27,998 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6669443883/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 18:39:51] 2025-05-29 16:39:28,137 | INFO     | number of running child processes to parent process 3252687: 1
[2025-05-29 18:39:51] 2025-05-29 16:39:28,137 | INFO     | maximum number of monitored processes: 6
[2025-05-29 18:39:51] 2025-05-29 16:39:30,641 | INFO     | monitor loop #296: job 0:6669443883 is in state 'finished'
[2025-05-29 18:39:51] 2025-05-29 16:39:30,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 18:39:51] 2025-05-29 16:39:32,865 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-29 18:39:51] 2025-05-29 16:39:32,866 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6669443883/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 18:39:51] 2025-05-29 16:39:32,866 | INFO     | extracted standard info from prmon json
[2025-05-29 18:39:51] 2025-05-29 16:39:32,866 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 18:39:51] 2025-05-29 16:39:32,866 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 18:39:51] 2025-05-29 16:39:32,866 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 18:39:51] 2025-05-29 16:39:32,866 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 18:39:51] 2025-05-29 16:39:32,867 | INFO     | fitting pss+swap vs Time
[2025-05-29 18:39:51] 2025-05-29 16:39:32,867 | INFO     | sum of square deviations: 54438230.0
[2025-05-29 18:39:51] 2025-05-29 16:39:32,867 | INFO     | sum of deviations: -4381474175.5
[2025-05-29 18:39:51] 2025-05-29 16:39:32,867 | INFO     | mean x: 1748534918.5
[2025-05-29 18:39:51] 2025-05-29 16:39:32,867 | INFO     | mean y: 2452166.5178571427
[2025-05-29 18:39:51] 2025-05-29 16:39:32,867 | INFO     | -- intersect: 140733710151.35217
[2025-05-29 18:39:51] 2025-05-29 16:39:32,867 | INFO     | intersect: 140733710151.35217
[2025-05-29 18:39:51] 2025-05-29 16:39:32,867 | INFO     | chi2: 0.02840322865546312
[2025-05-29 18:39:51] 2025-05-29 16:39:32,867 | INFO     | -- intersect: 140733710151.35217
[2025-05-29 18:39:51] 2025-05-29 16:39:32,868 | INFO     | current memory leak: -80.49 B/s (using 56 data points, chi2=0.03)
[2025-05-29 18:39:51] 2025-05-29 16:39:32,868 | INFO     | ..............................
[2025-05-29 18:39:51] 2025-05-29 16:39:32,868 | INFO     | . Timing measurements:
[2025-05-29 18:39:51] 2025-05-29 16:39:32,868 | INFO     | . get job = 0 s
[2025-05-29 18:39:51] 2025-05-29 16:39:32,868 | INFO     | . initial setup = 2 s
[2025-05-29 18:39:51] 2025-05-29 16:39:32,868 | INFO     | . payload setup = 10 s
[2025-05-29 18:39:51] 2025-05-29 16:39:32,868 | INFO     | . stage-in = 0 s
[2025-05-29 18:39:51] 2025-05-29 16:39:32,868 | INFO     | . payload execution = 3830 s
[2025-05-29 18:39:51] 2025-05-29 16:39:32,868 | INFO     | . stage-out = 0 s
[2025-05-29 18:39:51] 2025-05-29 16:39:32,868 | INFO     | . log creation = 0 s
[2025-05-29 18:39:51] 2025-05-29 16:39:32,868 | INFO     | ..............................
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | 
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | job summary report
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | --------------------------------------------------
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | PanDA job id: 6669443883
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | task id: 44871837
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | errors: (none)
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | pilot state: finished 
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | transexitcode: 0
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | exeerrorcode: 0
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | exeerrordiag: 
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | exitcode: 0
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | exitmsg: OK
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | cpuconsumptiontime: 14424 s
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | nevents: 400
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | neventsw: 0
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | pid: 3252687
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | pgrp: 3252687
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | corecount: 4
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | event service: False
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | sizes: {0: 2405248, 5: 2405454, 10: 2405510, 3844: 2440136, 3846: 2440136, 3854: 2440306}
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | --------------------------------------------------
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | 
[2025-05-29 18:39:51] 2025-05-29 16:39:32,899 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2025-05-29 18:39:51] 2025-05-29 16:39:32,924 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 18:39:51] 2025-05-29 16:39:32,924 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 18:39:51] 2025-05-29 16:39:32,924 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 18:39:51] 2025-05-29 16:39:32,924 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 18:39:51] 2025-05-29 16:39:32,924 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 18:39:51] 2025-05-29 16:39:32,924 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 18:39:51] 2025-05-29 16:39:32,924 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 18:39:51] 2025-05-29 16:39:32,924 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 18:39:51] 2025-05-29 16:39:32,924 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 18:39:51] 2025-05-29 16:39:32,924 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 18:39:51] 2025-05-29 16:39:32,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 18:39:51] 2025-05-29 16:39:32,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 18:39:51] 2025-05-29 16:39:32,924 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 18:39:51] 2025-05-29 16:39:32,924 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 18:39:51] 2025-05-29 16:39:32,924 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 18:39:51] 2025-05-29 16:39:32,924 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 18:39:51] 2025-05-29 16:39:32,924 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 18:39:51] 2025-05-29 16:39:32,925 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 18:39:51] 2025-05-29 16:39:32,925 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 18:39:51] 2025-05-29 16:39:32,925 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 18:39:51] 2025-05-29 16:39:32,925 | INFO     | job 6669443883 has completed (purged errors)
[2025-05-29 18:39:51] 2025-05-29 16:39:32,925 | INFO     | overall cleanup function is called
[2025-05-29 18:39:51] 2025-05-29 16:39:33,932 | INFO     | --- collectZombieJob: --- 10, [3252687]
[2025-05-29 18:39:51] 2025-05-29 16:39:33,932 | INFO     | zombie collector waiting for pid 3252687
[2025-05-29 18:39:51] 2025-05-29 16:39:33,932 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 18:39:51] 2025-05-29 16:39:33,932 | INFO     | collected zombie processes
[2025-05-29 18:39:51] 2025-05-29 16:39:33,932 | INFO     | will attempt to kill all subprocesses of pid=3252687
[2025-05-29 18:39:51] 2025-05-29 16:39:34,039 | INFO     | process IDs to be killed: [3252687] (in reverse order)
[2025-05-29 18:39:51] 2025-05-29 16:39:34,103 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 18:39:51] 2025-05-29 16:39:34,103 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 18:39:51] 2025-05-29 16:39:34,106 | INFO     | did not find any defunct processes belonging to 3252687
[2025-05-29 18:39:51] 2025-05-29 16:39:34,109 | INFO     | did not find any defunct processes belonging to 3252687
[2025-05-29 18:39:51] 2025-05-29 16:39:34,110 | INFO     | ready for new job
[2025-05-29 18:39:51] 2025-05-29 16:39:34,110 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 18:39:51] 2025-05-29 16:39:34,111 | INFO     | **************************************
[2025-05-29 18:39:51] 2025-05-29 16:39:34,111 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 18:39:51] 2025-05-29 16:39:34,111 | INFO     | **************************************
[2025-05-29 18:39:51] 2025-05-29 16:39:34,111 | INFO     | 
[2025-05-29 18:39:51] 2025-05-29 16:39:34,112 | INFO     | pilot is running in a VM
[2025-05-29 18:39:51] 2025-05-29 16:39:34,112 | INFO     | architecture information:
[2025-05-29 18:39:51] 2025-05-29 16:39:34,112 | INFO     | executing command: cat /etc/os-release
[2025-05-29 18:39:51] 2025-05-29 16:39:34,127 | INFO     | cat /etc/os-release:
[2025-05-29 18:39:51] NAME="CentOS Linux"
[2025-05-29 18:39:51] VERSION="7 (Core)"
[2025-05-29 18:39:51] ID="centos"
[2025-05-29 18:39:51] ID_LIKE="rhel fedora"
[2025-05-29 18:39:51] VERSION_ID="7"
[2025-05-29 18:39:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 18:39:51] ANSI_COLOR="0;31"
[2025-05-29 18:39:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 18:39:51] HOME_URL="https://www.centos.org/"
[2025-05-29 18:39:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 18:39:51] 
[2025-05-29 18:39:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 18:39:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 18:39:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 18:39:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 18:39:51] 
[2025-05-29 18:39:51] 2025-05-29 16:39:34,128 | INFO     | **************************************
[2025-05-29 18:39:51] 2025-05-29 16:39:34,631 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2025-05-29 18:39:51] 2025-05-29 16:39:34,647 | INFO     | sufficient remaining disk space (27395096576 B)
[2025-05-29 18:39:51] 2025-05-29 16:39:34,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 18:39:51] 2025-05-29 16:39:34,647 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 18:39:51] 2025-05-29 16:39:34,647 | INFO     | update_server=False
[2025-05-29 18:39:51] 2025-05-29 16:39:34,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 18:39:51] 2025-05-29 16:39:34,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 18:39:51] 2025-05-29 16:39:34,648 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 18:39:51] 2025-05-29 16:39:34,648 | INFO     | aborting loop
[2025-05-29 18:39:51] 2025-05-29 16:39:34,648 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-29 18:39:51] 2025-05-29 16:39:34,649 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 18:39:51] 2025-05-29 16:39:34,649 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 18:39:51] 2025-05-29 16:39:34,649 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 18:39:51] 2025-05-29 16:39:34,831 | INFO     | all data control threads have been joined
[2025-05-29 18:39:51] 2025-05-29 16:39:35,109 | INFO     | all payload control threads have been joined
[2025-05-29 18:39:51] 2025-05-29 16:39:35,653 | INFO     | [job] queue monitor thread has finished
[2025-05-29 18:39:51] 2025-05-29 16:39:35,654 | INFO     | [job] retrieve thread has finished
[2025-05-29 18:39:51] 2025-05-29 16:39:35,654 | INFO     | [job] job monitor thread has finished
[2025-05-29 18:39:51] 2025-05-29 16:39:35,720 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 18:39:51] 2025-05-29 16:39:35,735 | INFO     | [payload] failed_post thread has finished
[2025-05-29 18:39:51] 2025-05-29 16:39:35,810 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 18:39:51] 2025-05-29 16:39:35,837 | INFO     | [data] control thread has finished
[2025-05-29 18:39:51] 2025-05-29 16:39:36,072 | INFO     | all job control threads have been joined
[2025-05-29 18:39:51] 2025-05-29 16:39:36,080 | INFO     | [data] copytool_in thread has finished
[2025-05-29 18:39:51] 2025-05-29 16:39:36,114 | INFO     | [payload] control thread has finished
[2025-05-29 18:39:51] 2025-05-29 16:39:36,118 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 18:39:51] 2025-05-29 16:39:36,366 | INFO     | [job] validate thread has finished
[2025-05-29 18:39:51] 2025-05-29 16:39:36,455 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 18:39:51] 2025-05-29 16:39:36,505 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 18:39:51] 2025-05-29 16:39:36,549 | INFO     | [payload] validate_post thread has finished
[2025-05-29 18:39:51] 2025-05-29 16:39:37,078 | INFO     | [job] control thread has finished
[2025-05-29 18:39:51] 2025-05-29 16:39:38,124 | INFO     | [data] copytool_out thread has finished
[2025-05-29 18:39:51] 2025-05-29 16:39:39,818 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 18:39:51] 2025-05-29 16:39:45,033 | INFO     | job.realtimelogging is not enabled
[2025-05-29 18:39:51] 2025-05-29 16:39:46,039 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 18:39:51] 2025-05-29 16:39:46,184 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135229044950848)>', '<ExcThread(monitor, started 135228018374400)>']
[2025-05-29 18:39:51] 2025-05-29 16:39:46,710 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 18:39:51] 2025-05-29 16:39:46,710 | INFO     | [monitor] control thread has ended
[2025-05-29 18:39:51] 2025-05-29 16:39:51,189 | INFO     | all workflow threads have been joined
[2025-05-29 18:39:51] 2025-05-29 16:39:51,189 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 18:39:51] 2025-05-29 16:39:51,190 | INFO     | traces error code: 0
[2025-05-29 18:39:51] 2025-05-29 16:39:51,190 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 18:39:51] 2025-05-29 16:39:51,273 [wrapper] ==== pilot stdout END ====
[2025-05-29 18:39:51] 2025-05-29 16:39:51,279 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 18:39:51] 2025-05-29 16:39:51,284 [wrapper] pilotpid: 3245997
[2025-05-29 18:39:51] 2025-05-29 16:39:51,289 [wrapper] Pilot exit status: 0
[2025-05-29 18:39:51] 2025-05-29 16:39:51,308 [wrapper] pandaids: 6669443883
[2025-05-29 18:39:51] 2025-05-29 16:39:51,354 [wrapper] cleanup supervisor_pilot 3306989 3245998
[2025-05-29 18:39:51] 2025-05-29 16:39:51,359 [wrapper] Test setup, not cleaning
[2025-05-29 18:39:51] 2025-05-29 16:39:51,365 [wrapper] apfmon messages muted
[2025-05-29 18:39:51] 2025-05-29 16:39:51,370 [wrapper] ==== wrapper stdout END ====
[2025-05-29 18:39:51] 2025-05-29 16:39:51,375 [wrapper] ==== wrapper stderr END ====
[2025-05-29 18:39:51]  *** Error codes and diagnostics ***
[2025-05-29 18:39:51]     "exeErrorCode": 0,
[2025-05-29 18:39:51]     "exeErrorDiag": "",
[2025-05-29 18:39:51]     "pilotErrorCode": 0,
[2025-05-29 18:39:51]     "pilotErrorDiag": "",
[2025-05-29 18:39:51]  *** Listing of results directory ***
[2025-05-29 18:39:51] insgesamt 412904
[2025-05-29 18:39:51] -rw-r--r-- 1 yeti boinc    495897 Mai 29 09:06 pilot3.tar.gz
[2025-05-29 18:39:51] -rwx------ 1 yeti boinc     37140 Mai 29 09:12 runpilot2-wrapper.sh
[2025-05-29 18:39:51] -rw-r--r-- 1 yeti boinc      5111 Mai 29 09:12 queuedata.json
[2025-05-29 18:39:51] -rw-r--r-- 1 yeti boinc       100 Mai 29 17:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 18:39:51] -rwxr-xr-x 1 yeti boinc      7986 Mai 29 17:34 run_atlas
[2025-05-29 18:39:51] -rw-r--r-- 1 yeti boinc       105 Mai 29 17:34 job.xml
[2025-05-29 18:39:51] -rw-r--r-- 1 yeti boinc      6767 Mai 29 17:34 init_data.xml
[2025-05-29 18:39:51] -rw-r--r-- 2 yeti boinc 225740664 Mai 29 17:34 EVNT.44871834._003809.pool.root.1
[2025-05-29 18:39:51] -rw-r--r-- 2 yeti boinc     15093 Mai 29 17:34 start_atlas.sh
[2025-05-29 18:39:51] drwxrwx--x 2 yeti boinc      4096 Mai 29 17:34 shared
[2025-05-29 18:39:51] -rw-r--r-- 2 yeti boinc    508877 Mai 29 17:34 input.tar.gz
[2025-05-29 18:39:51] -rw-r--r-- 1 yeti boinc         0 Mai 29 17:34 boinc_lockfile
[2025-05-29 18:39:51] -rw-r--r-- 1 yeti boinc      2559 Mai 29 17:34 pandaJob.out
[2025-05-29 18:39:51] -rw------- 1 yeti boinc    992701 Mai 29 17:35 agis_schedconf.cvmfs.json
[2025-05-29 18:39:51] -rw------- 1 yeti boinc   1603667 Mai 29 17:35 agis_ddmendpoints.agis.ALL.json
[2025-05-29 18:39:51] drwx------ 4 yeti boinc      4096 Mai 29 17:35 pilot3
[2025-05-29 18:39:51] -rw------- 1 yeti boinc        95 Mai 29 18:38 pilot_heartbeat.json
[2025-05-29 18:39:51] -rw-r--r-- 1 yeti boinc       529 Mai 29 18:39 boinc_task_state.xml
[2025-05-29 18:39:51] -rw------- 1 yeti boinc 191955469 Mai 29 18:39 HITS.44871837._096645.pool.root.1
[2025-05-29 18:39:51] -rw------- 1 yeti boinc      1021 Mai 29 18:39 memory_monitor_summary.json
[2025-05-29 18:39:51] -rw------- 1 yeti boinc    232744 Mai 29 18:39 log.44871837._096645.job.log.tgz.1
[2025-05-29 18:39:51] -rw------- 1 yeti boinc      7659 Mai 29 18:39 heartbeat.json
[2025-05-29 18:39:51] -rw-r--r-- 1 yeti boinc      8192 Mai 29 18:39 boinc_mmap_file
[2025-05-29 18:39:51] -rw-r--r-- 1 yeti boinc        27 Mai 29 18:39 wrapper_checkpoint.txt
[2025-05-29 18:39:51] -rw------- 1 yeti boinc      4624 Mai 29 18:39 pilotlog.txt
[2025-05-29 18:39:51] -rw------- 1 yeti boinc    402731 Mai 29 18:39 log.44871837._096645.job.log.1
[2025-05-29 18:39:51] -rw------- 1 yeti boinc       357 Mai 29 18:39 output.list
[2025-05-29 18:39:51] -rw-r--r-- 1 yeti boinc       620 Mai 29 18:39 runtime_log
[2025-05-29 18:39:51] -rw------- 1 yeti boinc    655360 Mai 29 18:39 result.tar.gz
[2025-05-29 18:39:51] -rw-r--r-- 1 yeti boinc      8843 Mai 29 18:39 runtime_log.err
[2025-05-29 18:39:51] -rw------- 1 yeti boinc       640 Mai 29 18:39 l9GODmecme7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZ3dKDm8MQlfm.diag
[2025-05-29 18:39:51] -rw-r--r-- 1 yeti boinc     21366 Mai 29 18:39 stderr.txt
[2025-05-29 18:39:51] HITS file was successfully produced:
[2025-05-29 18:39:51] -rw------- 1 yeti boinc 191955469 Mai 29 18:39 shared/HITS.pool.root.1
[2025-05-29 18:39:51]  *** Contents of shared directory: ***
[2025-05-29 18:39:51] insgesamt 409076
[2025-05-29 18:39:51] -rw-r--r-- 2 yeti boinc 225740664 Mai 29 17:34 ATLAS.root_0
[2025-05-29 18:39:51] -rw-r--r-- 2 yeti boinc     15093 Mai 29 17:34 start_atlas.sh
[2025-05-29 18:39:51] -rw-r--r-- 2 yeti boinc    508877 Mai 29 17:34 input.tar.gz
[2025-05-29 18:39:51] -rw------- 1 yeti boinc 191955469 Mai 29 18:39 HITS.pool.root.1
[2025-05-29 18:39:51] -rw------- 1 yeti boinc    655360 Mai 29 18:39 result.tar.gz
18:39:53 (3242261): run_atlas exited; CPU time 14513.817881
18:39:53 (3242261): called boinc_finish(0)

</stderr_txt>
]]>

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