Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
17:06:08 (3218231): wrapper (7.7.26015): starting
17:06:08 (3218231): wrapper: running run_atlas (--nthreads 4)
[2025-05-29 17:06:08] Arguments: --nthreads 4
[2025-05-29 17:06:08] Threads: 4
[2025-05-29 17:06:08] Checking for CVMFS
[2025-05-29 17:06:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 17:06:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 17:06:08] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 17:06:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 17:06:08] 2.12.7.0 3393916 7578 98016 146565 0 187 7487800 10240001 1822 130560 0 22759646 99.997 1882759 787 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-05-29 17:06:08] CVMFS is ok
[2025-05-29 17:06:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 17:06:08] Checking for apptainer binary...
[2025-05-29 17:06:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 17:06:08] Running /usr/bin/apptainer --version
[2025-05-29 17:06:08] apptainer version 1.3.4
[2025-05-29 17:06:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 17:06:08] julianvlneu
[2025-05-29 17:06:08] apptainer works
[2025-05-29 17:06:08] Set ATHENA_PROC_NUMBER=4
[2025-05-29 17:06:08] Set ATHENA_CORE_NUMBER=4
[2025-05-29 17:06:08] Starting ATLAS job with PandaID=6669443599
[2025-05-29 17:06:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 18:12:08]  *** The last 200 lines of the pilot log: ***
[2025-05-29 18:12:08]  is_altstaged=None
[2025-05-29 18:12:08]  is_tar=False
[2025-05-29 18:12:08]  lfn=log.44871837._096477.job.log.tgz.1
[2025-05-29 18:12:08]  mtime=0
[2025-05-29 18:12:08]  protocol_id=None
[2025-05-29 18:12:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-05-29 18:12:08]  replicas=None
[2025-05-29 18:12:08]  scope=mc23_13p6TeV
[2025-05-29 18:12:08]  status=None
[2025-05-29 18:12:08]  status_code=0
[2025-05-29 18:12:08]  storage_token=
[2025-05-29 18:12:08]  surl=/var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6669443599/log.44871837._096477.job.log.tgz.1
[2025-05-29 18:12:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/1a/log.44871837._096477.job.log.tgz.1
[2025-05-29 18:12:08]  workdir=None
[2025-05-29 18:12:08] ]
[2025-05-29 18:12:08] 2025-05-29 16:11:48,187 | INFO     | transferring file log.44871837._096477.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6669443599/log.44871837._096477.job.log.tgz.1 to /var/li
[2025-05-29 18:12:08] 2025-05-29 16:11:48,187 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6669443599/log.44871837._096477.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2025-05-29 18:12:08] 2025-05-29 16:11:48,211 | INFO     | adding to output.list: log.44871837._096477.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/1a/log.44871837._096477.job.log.tg
[2025-05-29 18:12:08] 2025-05-29 16:11:48,213 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-05-29 18:12:08] 2025-05-29 16:11:48,213 | INFO     | summary of transferred files:
[2025-05-29 18:12:08] 2025-05-29 16:11:48,213 | INFO     |  -- lfn=log.44871837._096477.job.log.tgz.1, status_code=0, status=transferred
[2025-05-29 18:12:08] 2025-05-29 16:11:48,213 | INFO     | stage-out finished correctly
[2025-05-29 18:12:08] 2025-05-29 16:11:48,246 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-05-29 18:12:08] 2025-05-29 16:11:48,364 | WARNING  | process 3228660 can no longer be monitored (due to stat problems) - aborting
[2025-05-29 18:12:08] 2025-05-29 16:11:48,364 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6669443599/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 18:12:08] 2025-05-29 16:11:48,467 | INFO     | number of running child processes to parent process 3228660: 1
[2025-05-29 18:12:08] 2025-05-29 16:11:48,467 | INFO     | maximum number of monitored processes: 6
[2025-05-29 18:12:08] 2025-05-29 16:11:49,305 | INFO     | job 6669443599 has state=finished
[2025-05-29 18:12:08] 2025-05-29 16:11:49,305 | INFO     | preparing for final server update for job 6669443599 in state='finished'
[2025-05-29 18:12:08] 2025-05-29 16:11:49,305 | INFO     | this job has now completed (state=finished)
[2025-05-29 18:12:08] 2025-05-29 16:11:49,305 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-05-29 18:12:08] 2025-05-29 16:11:49,305 | INFO     | log transfer has been attempted: DONE
[2025-05-29 18:12:08] 2025-05-29 16:11:49,306 | INFO     | job 6669443599 has finished - writing final server update
[2025-05-29 18:12:08] 2025-05-29 16:11:49,306 | INFO     | total number of processed events: 400 (read)
[2025-05-29 18:12:08] 2025-05-29 16:11:49,307 | INFO     | executing command: lscpu
[2025-05-29 18:12:08] 2025-05-29 16:11:49,331 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-29 18:12:08] 2025-05-29 16:11:50,971 | INFO     | monitor loop #284: job 0:6669443599 is in state 'finished'
[2025-05-29 18:12:08] 2025-05-29 16:11:50,971 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 18:12:08] 2025-05-29 16:11:53,475 | INFO     | monitor loop #285: job 0:6669443599 is in state 'finished'
[2025-05-29 18:12:08] 2025-05-29 16:11:53,475 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 18:12:08] 2025-05-29 16:11:54,796 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-29 18:12:08] 2025-05-29 16:11:54,797 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6669443599/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 18:12:08] 2025-05-29 16:11:54,797 | INFO     | extracted standard info from prmon json
[2025-05-29 18:12:08] 2025-05-29 16:11:54,797 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 18:12:08] 2025-05-29 16:11:54,797 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 18:12:08] 2025-05-29 16:11:54,798 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 18:12:08] 2025-05-29 16:11:54,798 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 18:12:08] 2025-05-29 16:11:54,799 | INFO     | fitting pss+swap vs Time
[2025-05-29 18:12:08] 2025-05-29 16:11:54,799 | INFO     | sum of square deviations: 57407588.0
[2025-05-29 18:12:08] 2025-05-29 16:11:54,799 | INFO     | sum of deviations: -389583454.0
[2025-05-29 18:12:08] 2025-05-29 16:11:54,799 | INFO     | mean x: 1748533227.0
[2025-05-29 18:12:08] 2025-05-29 16:11:54,799 | INFO     | mean y: 2337009.3684210526
[2025-05-29 18:12:08] 2025-05-29 16:11:54,799 | INFO     | -- intersect: 11868357473.569532
[2025-05-29 18:12:08] 2025-05-29 16:11:54,799 | INFO     | intersect: 11868357473.569532
[2025-05-29 18:12:08] 2025-05-29 16:11:54,799 | INFO     | chi2: 0.0058509555974631455
[2025-05-29 18:12:08] 2025-05-29 16:11:54,799 | INFO     | -- intersect: 11868357473.569532
[2025-05-29 18:12:08] 2025-05-29 16:11:54,799 | INFO     | current memory leak: -6.79 B/s (using 57 data points, chi2=0.01)
[2025-05-29 18:12:08] 2025-05-29 16:11:54,800 | INFO     | ..............................
[2025-05-29 18:12:08] 2025-05-29 16:11:54,800 | INFO     | . Timing measurements:
[2025-05-29 18:12:08] 2025-05-29 16:11:54,800 | INFO     | . get job = 0 s
[2025-05-29 18:12:08] 2025-05-29 16:11:54,800 | INFO     | . initial setup = 1 s
[2025-05-29 18:12:08] 2025-05-29 16:11:54,800 | INFO     | . payload setup = 10 s
[2025-05-29 18:12:08] 2025-05-29 16:11:54,800 | INFO     | . stage-in = 0 s
[2025-05-29 18:12:08] 2025-05-29 16:11:54,800 | INFO     | . payload execution = 3895 s
[2025-05-29 18:12:08] 2025-05-29 16:11:54,800 | INFO     | . stage-out = 0 s
[2025-05-29 18:12:08] 2025-05-29 16:11:54,800 | INFO     | . log creation = 0 s
[2025-05-29 18:12:08] 2025-05-29 16:11:54,800 | INFO     | ..............................
[2025-05-29 18:12:08] 2025-05-29 16:11:54,835 | INFO     | 
[2025-05-29 18:12:08] 2025-05-29 16:11:54,835 | INFO     | job summary report
[2025-05-29 18:12:08] 2025-05-29 16:11:54,835 | INFO     | --------------------------------------------------
[2025-05-29 18:12:08] 2025-05-29 16:11:54,835 | INFO     | PanDA job id: 6669443599
[2025-05-29 18:12:08] 2025-05-29 16:11:54,835 | INFO     | task id: 44871837
[2025-05-29 18:12:08] 2025-05-29 16:11:54,835 | INFO     | errors: (none)
[2025-05-29 18:12:08] 2025-05-29 16:11:54,835 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 18:12:08] 2025-05-29 16:11:54,835 | INFO     | pilot state: finished 
[2025-05-29 18:12:08] 2025-05-29 16:11:54,835 | INFO     | transexitcode: 0
[2025-05-29 18:12:08] 2025-05-29 16:11:54,835 | INFO     | exeerrorcode: 0
[2025-05-29 18:12:08] 2025-05-29 16:11:54,835 | INFO     | exeerrordiag: 
[2025-05-29 18:12:08] 2025-05-29 16:11:54,835 | INFO     | exitcode: 0
[2025-05-29 18:12:08] 2025-05-29 16:11:54,836 | INFO     | exitmsg: OK
[2025-05-29 18:12:08] 2025-05-29 16:11:54,836 | INFO     | cpuconsumptiontime: 14594 s
[2025-05-29 18:12:08] 2025-05-29 16:11:54,836 | INFO     | nevents: 400
[2025-05-29 18:12:08] 2025-05-29 16:11:54,836 | INFO     | neventsw: 0
[2025-05-29 18:12:08] 2025-05-29 16:11:54,836 | INFO     | pid: 3228660
[2025-05-29 18:12:08] 2025-05-29 16:11:54,836 | INFO     | pgrp: 3228660
[2025-05-29 18:12:08] 2025-05-29 16:11:54,836 | INFO     | corecount: 4
[2025-05-29 18:12:08] 2025-05-29 16:11:54,836 | INFO     | event service: False
[2025-05-29 18:12:08] 2025-05-29 16:11:54,836 | INFO     | sizes: {0: 2405248, 5: 2405454, 10: 2405510, 3909: 2431111, 3910: 2440136, 3917: 2440250}
[2025-05-29 18:12:08] 2025-05-29 16:11:54,836 | INFO     | --------------------------------------------------
[2025-05-29 18:12:08] 2025-05-29 16:11:54,836 | INFO     | 
[2025-05-29 18:12:08] 2025-05-29 16:11:54,836 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2025-05-29 18:12:08] 2025-05-29 16:11:54,861 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 18:12:08] 2025-05-29 16:11:54,861 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 18:12:08] 2025-05-29 16:11:54,861 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 18:12:08] 2025-05-29 16:11:54,861 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 18:12:08] 2025-05-29 16:11:54,861 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 18:12:08] 2025-05-29 16:11:54,861 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 18:12:08] 2025-05-29 16:11:54,861 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 18:12:08] 2025-05-29 16:11:54,861 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 18:12:08] 2025-05-29 16:11:54,862 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 18:12:08] 2025-05-29 16:11:54,862 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 18:12:08] 2025-05-29 16:11:54,862 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 18:12:08] 2025-05-29 16:11:54,862 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 18:12:08] 2025-05-29 16:11:54,862 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 18:12:08] 2025-05-29 16:11:54,862 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 18:12:08] 2025-05-29 16:11:54,862 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 18:12:08] 2025-05-29 16:11:54,862 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 18:12:08] 2025-05-29 16:11:54,862 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 18:12:08] 2025-05-29 16:11:54,862 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 18:12:08] 2025-05-29 16:11:54,862 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 18:12:08] 2025-05-29 16:11:54,862 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 18:12:08] 2025-05-29 16:11:54,862 | INFO     | job 6669443599 has completed (purged errors)
[2025-05-29 18:12:08] 2025-05-29 16:11:54,862 | INFO     | overall cleanup function is called
[2025-05-29 18:12:08] 2025-05-29 16:11:55,869 | INFO     | --- collectZombieJob: --- 10, [3228660]
[2025-05-29 18:12:08] 2025-05-29 16:11:55,869 | INFO     | zombie collector waiting for pid 3228660
[2025-05-29 18:12:08] 2025-05-29 16:11:55,869 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 18:12:08] 2025-05-29 16:11:55,869 | INFO     | collected zombie processes
[2025-05-29 18:12:08] 2025-05-29 16:11:55,869 | INFO     | will attempt to kill all subprocesses of pid=3228660
[2025-05-29 18:12:08] 2025-05-29 16:11:55,983 | INFO     | process IDs to be killed: [3228660] (in reverse order)
[2025-05-29 18:12:08] 2025-05-29 16:11:56,045 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 18:12:08] 2025-05-29 16:11:56,046 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 18:12:08] 2025-05-29 16:11:56,050 | INFO     | did not find any defunct processes belonging to 3228660
[2025-05-29 18:12:08] 2025-05-29 16:11:56,053 | INFO     | did not find any defunct processes belonging to 3228660
[2025-05-29 18:12:08] 2025-05-29 16:11:56,053 | INFO     | ready for new job
[2025-05-29 18:12:08] 2025-05-29 16:11:56,053 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 18:12:08] 2025-05-29 16:11:56,055 | INFO     | **************************************
[2025-05-29 18:12:08] 2025-05-29 16:11:56,055 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 18:12:08] 2025-05-29 16:11:56,055 | INFO     | **************************************
[2025-05-29 18:12:08] 2025-05-29 16:11:56,055 | INFO     | 
[2025-05-29 18:12:08] 2025-05-29 16:11:56,055 | INFO     | pilot is running in a VM
[2025-05-29 18:12:08] 2025-05-29 16:11:56,055 | INFO     | architecture information:
[2025-05-29 18:12:08] 2025-05-29 16:11:56,055 | INFO     | executing command: cat /etc/os-release
[2025-05-29 18:12:08] 2025-05-29 16:11:56,070 | INFO     | cat /etc/os-release:
[2025-05-29 18:12:08] NAME="CentOS Linux"
[2025-05-29 18:12:08] VERSION="7 (Core)"
[2025-05-29 18:12:08] ID="centos"
[2025-05-29 18:12:08] ID_LIKE="rhel fedora"
[2025-05-29 18:12:08] VERSION_ID="7"
[2025-05-29 18:12:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 18:12:08] ANSI_COLOR="0;31"
[2025-05-29 18:12:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 18:12:08] HOME_URL="https://www.centos.org/"
[2025-05-29 18:12:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 18:12:08] 
[2025-05-29 18:12:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 18:12:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 18:12:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 18:12:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 18:12:08] 
[2025-05-29 18:12:08] 2025-05-29 16:11:56,070 | INFO     | **************************************
[2025-05-29 18:12:08] 2025-05-29 16:11:56,574 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2025-05-29 18:12:08] 2025-05-29 16:11:56,590 | INFO     | sufficient remaining disk space (27453816832 B)
[2025-05-29 18:12:08] 2025-05-29 16:11:56,590 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 18:12:08] 2025-05-29 16:11:56,590 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 18:12:08] 2025-05-29 16:11:56,590 | INFO     | update_server=False
[2025-05-29 18:12:08] 2025-05-29 16:11:56,590 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 18:12:08] 2025-05-29 16:11:56,591 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 18:12:08] 2025-05-29 16:11:56,591 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 18:12:08] 2025-05-29 16:11:56,657 | INFO     | all job control threads have been joined
[2025-05-29 18:12:08] 2025-05-29 16:11:56,984 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 18:12:08] 2025-05-29 16:11:56,984 | INFO     | aborting loop
[2025-05-29 18:12:08] 2025-05-29 16:11:57,368 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 18:12:08] 2025-05-29 16:11:57,368 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 18:12:08] 2025-05-29 16:11:57,368 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 18:12:08] 2025-05-29 16:11:57,596 | INFO     | [job] queue monitor thread has finished
[2025-05-29 18:12:08] 2025-05-29 16:11:57,597 | INFO     | [job] retrieve thread has finished
[2025-05-29 18:12:08] 2025-05-29 16:11:57,663 | INFO     | [job] control thread has finished
[2025-05-29 18:12:08] 2025-05-29 16:11:57,672 | INFO     | all data control threads have been joined
[2025-05-29 18:12:08] 2025-05-29 16:11:57,750 | INFO     | all payload control threads have been joined
[2025-05-29 18:12:08] 2025-05-29 16:11:57,990 | INFO     | [job] job monitor thread has finished
[2025-05-29 18:12:08] 2025-05-29 16:11:58,071 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 18:12:08] 2025-05-29 16:11:58,515 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 18:12:08] 2025-05-29 16:11:58,522 | INFO     | [data] copytool_in thread has finished
[2025-05-29 18:12:08] 2025-05-29 16:11:58,525 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 18:12:08] 2025-05-29 16:11:58,534 | INFO     | [job] validate thread has finished
[2025-05-29 18:12:08] 2025-05-29 16:11:58,597 | INFO     | [data] copytool_out thread has finished
[2025-05-29 18:12:08] 2025-05-29 16:11:58,678 | INFO     | [data] control thread has finished
[2025-05-29 18:12:08] 2025-05-29 16:11:58,756 | INFO     | [payload] control thread has finished
[2025-05-29 18:12:08] 2025-05-29 16:11:58,783 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 18:12:08] 2025-05-29 16:11:58,804 | INFO     | [payload] validate_post thread has finished
[2025-05-29 18:12:08] 2025-05-29 16:11:59,013 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 18:12:08] 2025-05-29 16:11:59,097 | INFO     | [payload] failed_post thread has finished
[2025-05-29 18:12:08] 2025-05-29 16:12:02,790 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 18:12:08] 2025-05-29 16:12:03,589 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126040219371328)>', '<ExcThread(monitor, started 126038768088832)>']
[2025-05-29 18:12:08] 2025-05-29 16:12:04,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 18:12:08] 2025-05-29 16:12:04,405 | INFO     | [monitor] control thread has ended
[2025-05-29 18:12:08] 2025-05-29 16:12:08,615 | INFO     | all workflow threads have been joined
[2025-05-29 18:12:08] 2025-05-29 16:12:08,615 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 18:12:08] 2025-05-29 16:12:08,616 | INFO     | traces error code: 0
[2025-05-29 18:12:08] 2025-05-29 16:12:08,616 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 18:12:08] 2025-05-29 16:12:08,691 [wrapper] ==== pilot stdout END ====
[2025-05-29 18:12:08] 2025-05-29 16:12:08,697 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 18:12:08] 2025-05-29 16:12:08,702 [wrapper] pilotpid: 3221972
[2025-05-29 18:12:08] 2025-05-29 16:12:08,707 [wrapper] Pilot exit status: 0
[2025-05-29 18:12:08] 2025-05-29 16:12:08,729 [wrapper] pandaids: 6669443599
[2025-05-29 18:12:08] 2025-05-29 16:12:08,775 [wrapper] cleanup supervisor_pilot 3283359 3221973
[2025-05-29 18:12:08] 2025-05-29 16:12:08,780 [wrapper] Test setup, not cleaning
[2025-05-29 18:12:08] 2025-05-29 16:12:08,786 [wrapper] apfmon messages muted
[2025-05-29 18:12:08] 2025-05-29 16:12:08,791 [wrapper] ==== wrapper stdout END ====
[2025-05-29 18:12:08] 2025-05-29 16:12:08,796 [wrapper] ==== wrapper stderr END ====
[2025-05-29 18:12:08]  *** Error codes and diagnostics ***
[2025-05-29 18:12:08]     "exeErrorCode": 0,
[2025-05-29 18:12:08]     "exeErrorDiag": "",
[2025-05-29 18:12:08]     "pilotErrorCode": 0,
[2025-05-29 18:12:08]     "pilotErrorDiag": "",
[2025-05-29 18:12:08]  *** Listing of results directory ***
[2025-05-29 18:12:08] insgesamt 416336
[2025-05-29 18:12:08] -rw-r--r-- 1 yeti boinc    495897 Mai 29 08:50 pilot3.tar.gz
[2025-05-29 18:12:08] -rwx------ 1 yeti boinc     37140 Mai 29 08:59 runpilot2-wrapper.sh
[2025-05-29 18:12:08] -rw-r--r-- 1 yeti boinc      5111 Mai 29 08:59 queuedata.json
[2025-05-29 18:12:08] -rw-r--r-- 1 yeti boinc       100 Mai 29 17:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 18:12:08] -rwxr-xr-x 1 yeti boinc      7986 Mai 29 17:06 run_atlas
[2025-05-29 18:12:08] -rw-r--r-- 1 yeti boinc       105 Mai 29 17:06 job.xml
[2025-05-29 18:12:08] -rw-r--r-- 2 yeti boinc     15093 Mai 29 17:06 start_atlas.sh
[2025-05-29 18:12:08] drwxrwx--x 2 yeti boinc      4096 Mai 29 17:06 shared
[2025-05-29 18:12:08] -rw-r--r-- 2 yeti boinc    508877 Mai 29 17:06 input.tar.gz
[2025-05-29 18:12:08] -rw-r--r-- 1 yeti boinc      6767 Mai 29 17:06 init_data.xml
[2025-05-29 18:12:08] -rw-r--r-- 2 yeti boinc 225028758 Mai 29 17:06 EVNT.44871834._003802.pool.root.1
[2025-05-29 18:12:08] -rw-r--r-- 1 yeti boinc         0 Mai 29 17:06 boinc_lockfile
[2025-05-29 18:12:08] -rw-r--r-- 1 yeti boinc      2559 Mai 29 17:06 pandaJob.out
[2025-05-29 18:12:08] -rw------- 1 yeti boinc    992776 Mai 29 17:06 agis_schedconf.cvmfs.json
[2025-05-29 18:12:08] -rw------- 1 yeti boinc   1603667 Mai 29 17:06 agis_ddmendpoints.agis.ALL.json
[2025-05-29 18:12:08] drwx------ 4 yeti boinc      4096 Mai 29 17:06 pilot3
[2025-05-29 18:12:08] -rw------- 1 yeti boinc        95 Mai 29 18:10 pilot_heartbeat.json
[2025-05-29 18:12:08] -rw------- 1 yeti boinc 196187952 Mai 29 18:11 HITS.44871837._096477.pool.root.1
[2025-05-29 18:12:08] -rw-r--r-- 1 yeti boinc       529 Mai 29 18:11 boinc_task_state.xml
[2025-05-29 18:12:08] -rw------- 1 yeti boinc      1021 Mai 29 18:11 memory_monitor_summary.json
[2025-05-29 18:12:08] -rw------- 1 yeti boinc    239900 Mai 29 18:11 log.44871837._096477.job.log.tgz.1
[2025-05-29 18:12:08] -rw------- 1 yeti boinc      7652 Mai 29 18:11 heartbeat.json
[2025-05-29 18:12:08] -rw-r--r-- 1 yeti boinc        27 Mai 29 18:12 wrapper_checkpoint.txt
[2025-05-29 18:12:08] -rw-r--r-- 1 yeti boinc      8192 Mai 29 18:12 boinc_mmap_file
[2025-05-29 18:12:08] -rw------- 1 yeti boinc      4429 Mai 29 18:12 pilotlog.txt
[2025-05-29 18:12:08] -rw------- 1 yeti boinc    392523 Mai 29 18:12 log.44871837._096477.job.log.1
[2025-05-29 18:12:08] -rw------- 1 yeti boinc       357 Mai 29 18:12 output.list
[2025-05-29 18:12:08] -rw-r--r-- 1 yeti boinc       620 Mai 29 18:12 runtime_log
[2025-05-29 18:12:08] -rw------- 1 yeti boinc    655360 Mai 29 18:12 result.tar.gz
[2025-05-29 18:12:08] -rw-r--r-- 1 yeti boinc      8843 Mai 29 18:12 runtime_log.err
[2025-05-29 18:12:08] -rw------- 1 yeti boinc       640 Mai 29 18:12 75OKDmmPme7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmj1dKDm1xYTpn.diag
[2025-05-29 18:12:08] -rw-r--r-- 1 yeti boinc     21142 Mai 29 18:12 stderr.txt
[2025-05-29 18:12:08] HITS file was successfully produced:
[2025-05-29 18:12:08] -rw------- 1 yeti boinc 196187952 Mai 29 18:11 shared/HITS.pool.root.1
[2025-05-29 18:12:08]  *** Contents of shared directory: ***
[2025-05-29 18:12:08] insgesamt 412512
[2025-05-29 18:12:08] -rw-r--r-- 2 yeti boinc     15093 Mai 29 17:06 start_atlas.sh
[2025-05-29 18:12:08] -rw-r--r-- 2 yeti boinc    508877 Mai 29 17:06 input.tar.gz
[2025-05-29 18:12:08] -rw-r--r-- 2 yeti boinc 225028758 Mai 29 17:06 ATLAS.root_0
[2025-05-29 18:12:08] -rw------- 1 yeti boinc 196187952 Mai 29 18:11 HITS.pool.root.1
[2025-05-29 18:12:08] -rw------- 1 yeti boinc    655360 Mai 29 18:12 result.tar.gz
18:12:09 (3218231): run_atlas exited; CPU time 14699.562310
18:12:09 (3218231): called boinc_finish(0)

</stderr_txt>
]]>

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