Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:57:36 (845135): wrapper (7.7.26015): starting
09:57:36 (845135): wrapper: running run_atlas (--nthreads 9)
[2025-05-29 09:57:36] Arguments: --nthreads 9
[2025-05-29 09:57:36] Threads: 9
[2025-05-29 09:57:36] Checking for CVMFS
[2025-05-29 09:57:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 09:57:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 09:57:38] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 09:57:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 09:57:40] 2.12.6.0 8433 22950 422464 146563 1 348 35783032 40960001 18187 16776704 1 67929066 99.590 74839794 24006 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-29 09:57:40] CVMFS is ok
[2025-05-29 09:57:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-29 09:57:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-29 09:57:40] Further information can be found at the LHC@home message board.
[2025-05-29 09:57:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 09:57:40] Checking for apptainer binary...
[2025-05-29 09:57:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 09:57:40] Running /usr/bin/apptainer --version
[2025-05-29 09:57:40] apptainer version 1.4.1-1.el9
[2025-05-29 09:57:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 09:57:41] c6-5-7-1.aglt2.org
[2025-05-29 09:57:41] apptainer works
[2025-05-29 09:57:41] Set ATHENA_PROC_NUMBER=9
[2025-05-29 09:57:41] Set ATHENA_CORE_NUMBER=9
[2025-05-29 09:57:41] Starting ATLAS job with PandaID=6670519719
[2025-05-29 09:57:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 15:04:05]  *** The last 200 lines of the pilot log: ***
[2025-05-29 15:04:05] 2025-05-29 19:03:53,226 | INFO     | mean y: 2159685.505050505
[2025-05-29 15:04:05] 2025-05-29 19:03:53,226 | INFO     | -- intersect: -26214002521.551853
[2025-05-29 15:04:05] 2025-05-29 19:03:53,226 | INFO     | intersect: -26214002521.551853
[2025-05-29 15:04:05] 2025-05-29 19:03:53,227 | INFO     | chi2: 5.469716846036097
[2025-05-29 15:04:05] 2025-05-29 19:03:53,227 | INFO     | sum of square deviations: 7720173446.50339
[2025-05-29 15:04:05] 2025-05-29 19:03:53,230 | INFO     | sum of deviations: 137626618157.72958
[2025-05-29 15:04:05] 2025-05-29 19:03:53,230 | INFO     | mean x: 1748536211.0924656
[2025-05-29 15:04:05] 2025-05-29 19:03:53,231 | INFO     | mean y: 2165584.1952054794
[2025-05-29 15:04:05] 2025-05-29 19:03:53,231 | INFO     | -- intersect: -31168782468.53004
[2025-05-29 15:04:05] 2025-05-29 19:03:53,231 | INFO     | intersect: -31168782468.53004
[2025-05-29 15:04:05] 2025-05-29 19:03:53,231 | INFO     | chi2: 4.790240647625362
[2025-05-29 15:04:05] 2025-05-29 19:03:53,232 | INFO     | current chi2=4.790240647625362 (change=12.422511393860386 %)
[2025-05-29 15:04:05] 2025-05-29 19:03:53,232 | INFO     | right removable region: 291
[2025-05-29 15:04:05] 2025-05-29 19:03:53,232 | INFO     | sum of square deviations: 7720067916.503392
[2025-05-29 15:04:05] 2025-05-29 19:03:53,236 | INFO     | sum of deviations: 48172494077.17811
[2025-05-29 15:04:05] 2025-05-29 19:03:53,236 | INFO     | mean x: 1748536516.0924656
[2025-05-29 15:04:05] 2025-05-29 19:03:53,236 | INFO     | mean y: 2187457.808219178
[2025-05-29 15:04:05] 2025-05-29 19:03:53,236 | INFO     | -- intersect: -10908515126.18464
[2025-05-29 15:04:05] 2025-05-29 19:03:53,237 | INFO     | intersect: -10908515126.18464
[2025-05-29 15:04:05] 2025-05-29 19:03:53,237 | INFO     | chi2: 2.32614847645042
[2025-05-29 15:04:05] 2025-05-29 19:03:53,237 | INFO     | current chi2=2.32614847645042 (change=57.47223225757693 %)
[2025-05-29 15:04:05] 2025-05-29 19:03:53,238 | INFO     | sum of square deviations: 7330184584.7177725
[2025-05-29 15:04:05] 2025-05-29 19:03:53,241 | INFO     | sum of deviations: 5408491527.480846
[2025-05-29 15:04:05] 2025-05-29 19:03:53,241 | INFO     | mean x: 1748536668.6027875
[2025-05-29 15:04:05] 2025-05-29 19:03:53,242 | INFO     | mean y: 2204184.898954704
[2025-05-29 15:04:05] 2025-05-29 19:03:53,242 | INFO     | -- intersect: -1287933280.0352757
[2025-05-29 15:04:05] 2025-05-29 19:03:53,242 | INFO     | intersect: -1287933280.0352757
[2025-05-29 15:04:05] 2025-05-29 19:03:53,242 | INFO     | chi2: 1.342807951775736
[2025-05-29 15:04:05] 2025-05-29 19:03:53,243 | INFO     | current chi2=1.342807951775736 (change=42.273334425118456 %)
[2025-05-29 15:04:05] 2025-05-29 19:03:53,243 | INFO     | sum of square deviations: 6953668091.592194
[2025-05-29 15:04:05] 2025-05-29 19:03:53,246 | INFO     | sum of deviations: -19974925264.29433
[2025-05-29 15:04:05] 2025-05-29 19:03:53,246 | INFO     | mean x: 1748536821.109929
[2025-05-29 15:04:05] 2025-05-29 19:03:53,246 | INFO     | mean y: 2214437.783687943
[2025-05-29 15:04:05] 2025-05-29 19:03:53,246 | INFO     | -- intersect: 5025015621.7758255
[2025-05-29 15:04:05] 2025-05-29 19:03:53,247 | INFO     | intersect: 5025015621.7758255
[2025-05-29 15:04:05] 2025-05-29 19:03:53,247 | INFO     | chi2: 0.9239784306595982
[2025-05-29 15:04:05] 2025-05-29 19:03:53,247 | INFO     | current chi2=0.9239784306595982 (change=31.19057498596695 %)
[2025-05-29 15:04:05] 2025-05-29 19:03:53,248 | INFO     | sum of square deviations: 6590268001.436837
[2025-05-29 15:04:05] 2025-05-29 19:03:53,250 | INFO     | sum of deviations: -30963463384.537918
[2025-05-29 15:04:05] 2025-05-29 19:03:53,250 | INFO     | mean x: 1748536973.6173284
[2025-05-29 15:04:05] 2025-05-29 19:03:53,250 | INFO     | mean y: 2219016.570397112
[2025-05-29 15:04:05] 2025-05-29 19:03:53,250 | INFO     | -- intersect: 8217478327.315711
[2025-05-29 15:04:05] 2025-05-29 19:03:53,250 | INFO     | intersect: 8217478327.315711
[2025-05-29 15:04:05] 2025-05-29 19:03:53,251 | INFO     | chi2: 0.8029765627715979
[2025-05-29 15:04:05] 2025-05-29 19:03:53,251 | INFO     | current chi2=0.8029765627715979 (change=13.09574594740496 %)
[2025-05-29 15:04:05] 2025-05-29 19:03:53,251 | INFO     | left removable region: 40
[2025-05-29 15:04:05] 2025-05-29 19:03:53,251 | INFO     | sum of square deviations: 4903251622.007999
[2025-05-29 15:04:05] 2025-05-29 19:03:53,253 | INFO     | sum of deviations: -10994914993.262955
[2025-05-29 15:04:05] 2025-05-29 19:03:53,253 | INFO     | mean x: 1748537400.6374502
[2025-05-29 15:04:05] 2025-05-29 19:03:53,253 | INFO     | mean y: 2225506.964143426
[2025-05-29 15:04:05] 2025-05-29 19:03:53,253 | INFO     | -- intersect: 3923097117.195035
[2025-05-29 15:04:05] 2025-05-29 19:03:53,253 | INFO     | intersect: 3923097117.195035
[2025-05-29 15:04:05] 2025-05-29 19:03:53,253 | INFO     | chi2: 0.09003966429392461
[2025-05-29 15:04:05] 2025-05-29 19:03:53,254 | INFO     | -- intersect: 3923097117.195035
[2025-05-29 15:04:05] 2025-05-29 19:03:53,254 | INFO     | current memory leak: -2.24 B/s (using 251 data points, chi2=0.09)
[2025-05-29 15:04:05] 2025-05-29 19:03:53,254 | INFO     | ..............................
[2025-05-29 15:04:05] 2025-05-29 19:03:53,254 | INFO     | . Timing measurements:
[2025-05-29 15:04:05] 2025-05-29 19:03:53,254 | INFO     | . get job = 1 s
[2025-05-29 15:04:05] 2025-05-29 19:03:53,255 | INFO     | . initial setup = 5 s
[2025-05-29 15:04:05] 2025-05-29 19:03:53,255 | INFO     | . payload setup = 69 s
[2025-05-29 15:04:05] 2025-05-29 19:03:53,255 | INFO     | . stage-in = 0 s
[2025-05-29 15:04:05] 2025-05-29 19:03:53,255 | INFO     | . payload execution = 18115 s
[2025-05-29 15:04:05] 2025-05-29 19:03:53,255 | INFO     | . stage-out = 2 s
[2025-05-29 15:04:05] 2025-05-29 19:03:53,255 | INFO     | . log creation = 0 s
[2025-05-29 15:04:05] 2025-05-29 19:03:53,255 | INFO     | ..............................
[2025-05-29 15:04:05] 2025-05-29 19:03:53,525 | INFO     | 
[2025-05-29 15:04:05] 2025-05-29 19:03:53,525 | INFO     | job summary report
[2025-05-29 15:04:05] 2025-05-29 19:03:53,525 | INFO     | --------------------------------------------------
[2025-05-29 15:04:05] 2025-05-29 19:03:53,525 | INFO     | PanDA job id: 6670519719
[2025-05-29 15:04:05] 2025-05-29 19:03:53,526 | INFO     | task id: 44871837
[2025-05-29 15:04:05] 2025-05-29 19:03:53,526 | INFO     | errors: (none)
[2025-05-29 15:04:05] 2025-05-29 19:03:53,526 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 15:04:05] 2025-05-29 19:03:53,526 | INFO     | pilot state: finished 
[2025-05-29 15:04:05] 2025-05-29 19:03:53,526 | INFO     | transexitcode: 0
[2025-05-29 15:04:05] 2025-05-29 19:03:53,527 | INFO     | exeerrorcode: 0
[2025-05-29 15:04:05] 2025-05-29 19:03:53,527 | INFO     | exeerrordiag: 
[2025-05-29 15:04:05] 2025-05-29 19:03:53,527 | INFO     | exitcode: 0
[2025-05-29 15:04:05] 2025-05-29 19:03:53,527 | INFO     | exitmsg: OK
[2025-05-29 15:04:05] 2025-05-29 19:03:53,527 | INFO     | cpuconsumptiontime: 53634 s
[2025-05-29 15:04:05] 2025-05-29 19:03:53,527 | INFO     | nevents: 400
[2025-05-29 15:04:05] 2025-05-29 19:03:53,527 | INFO     | neventsw: 0
[2025-05-29 15:04:05] 2025-05-29 19:03:53,527 | INFO     | pid: 866402
[2025-05-29 15:04:05] 2025-05-29 19:03:53,527 | INFO     | pgrp: 866402
[2025-05-29 15:04:05] 2025-05-29 19:03:53,527 | INFO     | corecount: 9
[2025-05-29 15:04:05] 2025-05-29 19:03:53,527 | INFO     | event service: False
[2025-05-29 15:04:05] 2025-05-29 19:03:53,527 | INFO     | sizes: {0: 2404356, 1: 2405041, 2: 2405240, 3: 2405268, 15: 2405268, 26: 2405296, 36: 2405452, 45: 2405686, 48: 2405714, 18188: 2437795, 18189: 2437794, 18193: 244
[2025-05-29 15:04:05] 2025-05-29 19:03:53,527 | INFO     | --------------------------------------------------
[2025-05-29 15:04:05] 2025-05-29 19:03:53,527 | INFO     | 
[2025-05-29 15:04:05] 2025-05-29 19:03:53,528 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-29 15:04:05] 2025-05-29 19:03:53,550 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 15:04:05] 2025-05-29 19:03:53,550 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 15:04:05] 2025-05-29 19:03:53,551 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 15:04:05] 2025-05-29 19:03:53,551 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 15:04:05] 2025-05-29 19:03:53,551 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 15:04:05] 2025-05-29 19:03:53,551 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 15:04:05] 2025-05-29 19:03:53,551 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 15:04:05] 2025-05-29 19:03:53,551 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 15:04:05] 2025-05-29 19:03:53,551 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 15:04:05] 2025-05-29 19:03:53,551 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 15:04:05] 2025-05-29 19:03:53,551 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 15:04:05] 2025-05-29 19:03:53,551 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 15:04:05] 2025-05-29 19:03:53,551 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 15:04:05] 2025-05-29 19:03:53,552 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 15:04:05] 2025-05-29 19:03:53,552 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 15:04:05] 2025-05-29 19:03:53,552 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 15:04:05] 2025-05-29 19:03:53,552 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 15:04:05] 2025-05-29 19:03:53,552 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 15:04:05] 2025-05-29 19:03:53,552 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 15:04:05] 2025-05-29 19:03:53,552 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 15:04:05] 2025-05-29 19:03:53,552 | INFO     | job 6670519719 has completed (purged errors)
[2025-05-29 15:04:05] 2025-05-29 19:03:53,552 | INFO     | overall cleanup function is called
[2025-05-29 15:04:05] 2025-05-29 19:03:54,559 | INFO     | --- collectZombieJob: --- 10, [866402]
[2025-05-29 15:04:05] 2025-05-29 19:03:54,560 | INFO     | zombie collector waiting for pid 866402
[2025-05-29 15:04:05] 2025-05-29 19:03:54,560 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 15:04:05] 2025-05-29 19:03:54,560 | INFO     | collected zombie processes
[2025-05-29 15:04:05] 2025-05-29 19:03:54,560 | INFO     | will attempt to kill all subprocesses of pid=866402
[2025-05-29 15:04:05] 2025-05-29 19:03:54,856 | INFO     | process IDs to be killed: [866402] (in reverse order)
[2025-05-29 15:04:05] 2025-05-29 19:03:54,947 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 15:04:05] 2025-05-29 19:03:54,947 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 15:04:05] 2025-05-29 19:03:54,956 | INFO     | did not find any defunct processes belonging to 866402
[2025-05-29 15:04:05] 2025-05-29 19:03:54,964 | INFO     | did not find any defunct processes belonging to 866402
[2025-05-29 15:04:05] 2025-05-29 19:03:54,964 | INFO     | ready for new job
[2025-05-29 15:04:05] 2025-05-29 19:03:54,964 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 15:04:05] 2025-05-29 19:03:54,966 | INFO     | **************************************
[2025-05-29 15:04:05] 2025-05-29 19:03:54,966 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 15:04:05] 2025-05-29 19:03:54,966 | INFO     | **************************************
[2025-05-29 15:04:05] 2025-05-29 19:03:54,966 | INFO     | 
[2025-05-29 15:04:05] 2025-05-29 19:03:54,981 | INFO     | architecture information:
[2025-05-29 15:04:05] 2025-05-29 19:03:54,982 | INFO     | executing command: cat /etc/os-release
[2025-05-29 15:04:05] 2025-05-29 19:03:54,994 | INFO     | cat /etc/os-release:
[2025-05-29 15:04:05] NAME="CentOS Linux"
[2025-05-29 15:04:05] VERSION="7 (Core)"
[2025-05-29 15:04:05] ID="centos"
[2025-05-29 15:04:05] ID_LIKE="rhel fedora"
[2025-05-29 15:04:05] VERSION_ID="7"
[2025-05-29 15:04:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 15:04:05] ANSI_COLOR="0;31"
[2025-05-29 15:04:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 15:04:05] HOME_URL="https://www.centos.org/"
[2025-05-29 15:04:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 15:04:05] 
[2025-05-29 15:04:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 15:04:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 15:04:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 15:04:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 15:04:05] 
[2025-05-29 15:04:05] 2025-05-29 19:03:54,994 | INFO     | **************************************
[2025-05-29 15:04:05] 2025-05-29 19:03:55,498 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-29 15:04:05] 2025-05-29 19:03:55,518 | INFO     | sufficient remaining disk space (75290902528 B)
[2025-05-29 15:04:05] 2025-05-29 19:03:55,518 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 15:04:05] 2025-05-29 19:03:55,518 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 15:04:05] 2025-05-29 19:03:55,519 | INFO     | update_server=False
[2025-05-29 15:04:05] 2025-05-29 19:03:55,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 15:04:05] 2025-05-29 19:03:55,519 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-29 15:04:05] 2025-05-29 19:03:55,519 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 15:04:05] 2025-05-29 19:03:55,520 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 15:04:05] 2025-05-29 19:03:55,520 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 15:04:05] 2025-05-29 19:03:55,583 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-29 15:04:05] 2025-05-29 19:03:55,584 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-29 15:04:05] 2025-05-29 19:03:55,584 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 15:04:05] 2025-05-29 19:03:55,584 | INFO     | will abort loop
[2025-05-29 15:04:05] 2025-05-29 19:03:56,097 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 15:04:05] 2025-05-29 19:03:56,313 | INFO     | all payload control threads have been joined
[2025-05-29 15:04:05] 2025-05-29 19:03:56,517 | INFO     | all data control threads have been joined
[2025-05-29 15:04:05] 2025-05-29 19:03:56,524 | INFO     | [job] retrieve thread has finished
[2025-05-29 15:04:05] 2025-05-29 19:03:56,579 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 15:04:05] 2025-05-29 19:03:56,590 | INFO     | [job] job monitor thread has finished
[2025-05-29 15:04:05] 2025-05-29 19:03:56,609 | INFO     | [payload] validate_post thread has finished
[2025-05-29 15:04:05] 2025-05-29 19:03:56,911 | INFO     | all job control threads have been joined
[2025-05-29 15:04:05] 2025-05-29 19:03:56,947 | INFO     | [payload] failed_post thread has finished
[2025-05-29 15:04:05] 2025-05-29 19:03:56,960 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 15:04:05] 2025-05-29 19:03:56,961 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 15:04:05] 2025-05-29 19:03:57,041 | INFO     | [job] validate thread has finished
[2025-05-29 15:04:05] 2025-05-29 19:03:57,319 | INFO     | [payload] control thread has finished
[2025-05-29 15:04:05] 2025-05-29 19:03:57,443 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 15:04:05] 2025-05-29 19:03:57,522 | INFO     | [data] control thread has finished
[2025-05-29 15:04:05] 2025-05-29 19:03:57,639 | INFO     | [data] copytool_in thread has finished
[2025-05-29 15:04:05] 2025-05-29 19:03:57,754 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 15:04:05] 2025-05-29 19:03:57,917 | INFO     | [job] control thread has finished
[2025-05-29 15:04:05] 2025-05-29 19:03:58,372 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 15:04:05] 2025-05-29 19:03:58,586 | INFO     | [data] copytool_out thread has finished
[2025-05-29 15:04:05] 2025-05-29 19:03:59,378 | INFO     | [job] queue monitor thread has finished
[2025-05-29 15:04:05] 2025-05-29 19:04:00,105 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 15:04:05] 2025-05-29 19:04:00,394 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140353760360256)>', '<ExcThread(monitor, started 140352669341440)>']
[2025-05-29 15:04:05] 2025-05-29 19:04:00,546 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 15:04:05] 2025-05-29 19:04:00,546 | INFO     | [monitor] control thread has ended
[2025-05-29 15:04:05] 2025-05-29 19:04:05,421 | INFO     | all workflow threads have been joined
[2025-05-29 15:04:05] 2025-05-29 19:04:05,421 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 15:04:05] 2025-05-29 19:04:05,421 | INFO     | traces error code: 0
[2025-05-29 15:04:05] 2025-05-29 19:04:05,421 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 15:04:05] 2025-05-29 19:04:05,590 [wrapper] ==== pilot stdout END ====
[2025-05-29 15:04:05] 2025-05-29 19:04:05,593 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 15:04:05] 2025-05-29 19:04:05,596 [wrapper] pilotpid: 853052
[2025-05-29 15:04:05] 2025-05-29 19:04:05,598 [wrapper] Pilot exit status: 0
[2025-05-29 15:04:05] 2025-05-29 19:04:05,613 [wrapper] pandaids: 6670519719
[2025-05-29 15:04:05] 2025-05-29 19:04:05,678 [wrapper] cleanup supervisor_pilot 2087262 853053
[2025-05-29 15:04:05] 2025-05-29 19:04:05,682 [wrapper] Test setup, not cleaning
[2025-05-29 15:04:05] 2025-05-29 19:04:05,685 [wrapper] apfmon messages muted
[2025-05-29 15:04:05] 2025-05-29 19:04:05,688 [wrapper] ==== wrapper stdout END ====
[2025-05-29 15:04:05] 2025-05-29 19:04:05,691 [wrapper] ==== wrapper stderr END ====
[2025-05-29 15:04:05]  *** Error codes and diagnostics ***
[2025-05-29 15:04:05]     "exeErrorCode": 0,
[2025-05-29 15:04:05]     "exeErrorDiag": "",
[2025-05-29 15:04:05]     "pilotErrorCode": 0,
[2025-05-29 15:04:05]     "pilotErrorDiag": "",
[2025-05-29 15:04:05]  *** Listing of results directory ***
[2025-05-29 15:04:05] total 427136
[2025-05-29 15:04:05] -rw-r--r--. 1 boincer umatlas    495897 May 29 06:07 pilot3.tar.gz
[2025-05-29 15:04:05] -rw-r--r--. 1 boincer umatlas      5111 May 29 06:15 queuedata.json
[2025-05-29 15:04:05] -rwx------. 1 boincer umatlas     37140 May 29 06:16 runpilot2-wrapper.sh
[2025-05-29 15:04:05] -rw-r--r--. 1 boincer umatlas       100 May 29 09:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 15:04:05] -rwxr-xr-x. 1 boincer umatlas      7986 May 29 09:57 run_atlas
[2025-05-29 15:04:05] -rw-r--r--. 1 boincer umatlas       105 May 29 09:57 job.xml
[2025-05-29 15:04:05] -rw-r--r--. 2 boincer umatlas 224776279 May 29 09:57 EVNT.44871834._002624.pool.root.1
[2025-05-29 15:04:05] -rw-r--r--. 2 boincer umatlas    508882 May 29 09:57 input.tar.gz
[2025-05-29 15:04:05] -rw-r--r--. 2 boincer umatlas     15093 May 29 09:57 start_atlas.sh
[2025-05-29 15:04:05] drwxrwx--x. 2 boincer umatlas      4096 May 29 09:57 shared
[2025-05-29 15:04:05] -rw-r--r--. 1 boincer umatlas         0 May 29 09:57 boinc_lockfile
[2025-05-29 15:04:05] -rw-r--r--. 1 boincer umatlas      2559 May 29 09:57 pandaJob.out
[2025-05-29 15:04:05] -rw-------. 1 boincer umatlas    992820 May 29 09:59 agis_schedconf.cvmfs.json
[2025-05-29 15:04:05] drwx------. 4 boincer umatlas      4096 May 29 09:59 pilot3
[2025-05-29 15:04:05] -rw-r--r--. 1 boincer umatlas      6839 May 29 15:01 init_data.xml
[2025-05-29 15:04:05] -rw-------. 1 boincer umatlas 204889669 May 29 15:03 HITS.44871837._098711.pool.root.1
[2025-05-29 15:04:05] -rw-------. 1 boincer umatlas        95 May 29 15:03 pilot_heartbeat.json
[2025-05-29 15:04:05] -rw-r--r--. 1 boincer umatlas       530 May 29 15:03 boinc_task_state.xml
[2025-05-29 15:04:05] -rw-------. 1 boincer umatlas      1045 May 29 15:03 memory_monitor_summary.json
[2025-05-29 15:04:05] -rw-r--r--. 1 boincer umatlas        27 May 29 15:03 wrapper_checkpoint.txt
[2025-05-29 15:04:05] -rw-r--r--. 1 boincer umatlas      8192 May 29 15:03 boinc_mmap_file
[2025-05-29 15:04:05] -rw-------. 1 boincer umatlas   1603667 May 29 15:03 agis_ddmendpoints.agis.ALL.json
[2025-05-29 15:04:05] -rw-------. 1 boincer umatlas    435366 May 29 15:03 log.44871837._098711.job.log.tgz.1
[2025-05-29 15:04:05] -rw-------. 1 boincer umatlas      7727 May 29 15:03 heartbeat.json
[2025-05-29 15:04:05] -rw-------. 1 boincer umatlas      4662 May 29 15:04 pilotlog.txt
[2025-05-29 15:04:05] -rw-------. 1 boincer umatlas   1501114 May 29 15:04 log.44871837._098711.job.log.1
[2025-05-29 15:04:05] -rw-------. 1 boincer umatlas       357 May 29 15:04 output.list
[2025-05-29 15:04:05] -rw-r--r--. 1 boincer umatlas       620 May 29 15:04 runtime_log
[2025-05-29 15:04:05] -rw-------. 1 boincer umatlas   1955840 May 29 15:04 result.tar.gz
[2025-05-29 15:04:05] -rw-------. 1 boincer umatlas       657 May 29 15:04 z1VKDmiUpe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmu3UKDmzIm80m.diag
[2025-05-29 15:04:05] -rw-r--r--. 1 boincer umatlas      8660 May 29 15:04 runtime_log.err
[2025-05-29 15:04:05] -rw-r--r--. 1 boincer umatlas     20917 May 29 15:04 stderr.txt
[2025-05-29 15:04:05] HITS file was successfully produced:
[2025-05-29 15:04:05] -rw-------. 1 boincer umatlas 204889669 May 29 15:03 shared/HITS.pool.root.1
[2025-05-29 15:04:05]  *** Contents of shared directory: ***
[2025-05-29 15:04:05] total 422036
[2025-05-29 15:04:05] -rw-r--r--. 2 boincer umatlas 224776279 May 29 09:57 ATLAS.root_0
[2025-05-29 15:04:05] -rw-r--r--. 2 boincer umatlas    508882 May 29 09:57 input.tar.gz
[2025-05-29 15:04:05] -rw-r--r--. 2 boincer umatlas     15093 May 29 09:57 start_atlas.sh
[2025-05-29 15:04:05] -rw-------. 1 boincer umatlas 204889669 May 29 15:03 HITS.pool.root.1
[2025-05-29 15:04:05] -rw-------. 1 boincer umatlas   1955840 May 29 15:04 result.tar.gz
15:04:07 (845135): run_atlas exited; CPU time 54083.066366
15:04:07 (845135): called boinc_finish(0)

</stderr_txt>
]]>

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