Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:40:13 (2405350): wrapper (7.7.26015): starting
05:40:13 (2405350): wrapper: running run_atlas (--nthreads 12)
[2025-05-29 05:40:13] Arguments: --nthreads 12
[2025-05-29 05:40:13] Threads: 12
[2025-05-29 05:40:13] Checking for CVMFS
[2025-05-29 05:40:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 05:40:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 05:40:14] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 05:40:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 05:40:14] 2.11.5.0 2067951 15027 211136 146562 3 544 24669912 45568001 10683 130560 0 144680949 99.776 96783116 31772 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-29 05:40:14] CVMFS is ok
[2025-05-29 05:40:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-29 05:40:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-29 05:40:14] Further information can be found at the LHC@home message board.
[2025-05-29 05:40:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 05:40:14] Checking for apptainer binary...
[2025-05-29 05:40:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 05:40:14] Running /usr/bin/apptainer --version
[2025-05-29 05:40:14] apptainer version 1.4.0-1.el9
[2025-05-29 05:40:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 05:40:14] wns0042.triumf.lcg
[2025-05-29 05:40:14] apptainer works
[2025-05-29 05:40:14] Set ATHENA_PROC_NUMBER=12
[2025-05-29 05:40:14] Set ATHENA_CORE_NUMBER=12
[2025-05-29 05:40:14] Starting ATLAS job with PandaID=6669999922
[2025-05-29 05:40:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 05:43:20]  *** The last 200 lines of the pilot log: ***
[2025-05-29 05:43:20] 2025-05-29 12:43:07,494 | INFO     | extracted standard info from prmon json
[2025-05-29 05:43:20] 2025-05-29 12:43:07,494 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 05:43:20] 2025-05-29 12:43:07,494 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 05:43:20] 2025-05-29 12:43:07,495 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 05:43:20] 2025-05-29 12:43:07,495 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 05:43:20] 2025-05-29 12:43:07,495 | WARNING  | found no stored workdir sizes
[2025-05-29 05:43:20] 2025-05-29 12:43:07,495 | INFO     | will not add max space = 0 B to job metrics
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | WARNING  | wrong length of table data, x=[1748522450.0], y=[1815.0] (must be same and length>=4)
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | ..............................
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . Timing measurements:
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . get job = 0 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . initial setup = 2 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . payload setup = 5 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . stage-in = 0 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . payload execution = 17 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . stage-out = 0 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . log creation = 0 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | ..............................
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-29 05:43:20] 2025-05-29 12:43:07,497 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669999922/pilotlog.txt
[2025-05-29 05:43:20] 2025-05-29 12:43:07,508 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-29 05:43:20] - Log from pilotlog.txt -
[2025-05-29 05:43:20] 2025-05-29 12:43:07,494 | INFO     | extracted standard info from prmon json
[2025-05-29 05:43:20] 2025-05-29 12:43:07,494 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 05:43:20] 2025-05-29 12:43:07,494 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 05:43:20] 2025-05-29 12:43:07,495 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 05:43:20] 2025-05-29 12:43:07,495 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 05:43:20] 2025-05-29 12:43:07,495 | WARNING  | found no stored workdir sizes
[2025-05-29 05:43:20] 2025-05-29 12:43:07,495 | INFO     | will not add max space = 0 B to job metrics
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | WARNING  | wrong length of table data, x=[1748522450.0], y=[1815.0] (must be same and length>=4)
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | ..............................
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . Timing measurements:
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . get job = 0 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . initial setup = 2 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . payload setup = 5 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . stage-in = 0 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . payload execution = 17 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . stage-out = 0 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . log creation = 0 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | ..............................
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-29 05:43:20] 2025-05-29 12:43:07,497 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669999922/pilotlog.txt
[2025-05-29 05:43:20] 2025-05-29 12:43:07,508 | WARNING  | 
[2025-05-29 05:43:20] [begin log extracts]
[2025-05-29 05:43:20] - Log from pilotlog.txt -
[2025-05-29 05:43:20] 2025-05-29 12:43:07,494 | INFO     | extracted standard info from prmon json
[2025-05-29 05:43:20] 2025-05-29 12:43:07,494 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 05:43:20] 2025-05-29 12:43:07,494 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 05:43:20] 2025-05-29 12:43:07,495 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 05:43:20] 2025-05-29 12:43:07,495 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 05:43:20] 2025-05-29 12:43:07,495 | WARNING  | found no stored workdir sizes
[2025-05-29 05:43:20] 2025-05-29 12:43:07,495 | INFO     | will not add max space = 0 B to job metrics
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | WARNING  | wrong length of table data, x=[1748522450.0], y=[1815.0] (must be same and length>=4)
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | ..............................
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . Timing measurements:
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . get job = 0 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . initial setup = 2 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . payload setup = 5 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . stage-in = 0 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . payload execution = 17 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . stage-out = 0 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | . log creation = 0 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | ..............................
[2025-05-29 05:43:20] 2025-05-29 12:43:07,496 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-29 05:43:20] 2025-05-29 12:43:07,497 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669999922/pilotlog.txt
[2025-05-29 05:43:20] [end log extracts]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,508 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-29 05:43:20] 2025-05-29 12:43:07,509 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-29 05:43:20] 2025-05-29 12:43:07,599 | INFO     | 
[2025-05-29 05:43:20] 2025-05-29 12:43:07,599 | INFO     | job summary report
[2025-05-29 05:43:20] 2025-05-29 12:43:07,599 | INFO     | --------------------------------------------------
[2025-05-29 05:43:20] 2025-05-29 12:43:07,599 | INFO     | PanDA job id: 6669999922
[2025-05-29 05:43:20] 2025-05-29 12:43:07,599 | INFO     | task id: 44871837
[2025-05-29 05:43:20] 2025-05-29 12:43:07,599 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-29 05:40:57,006 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-29 05:43:20] 2025-05-29 12:43:07,599 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 05:43:20] 2025-05-29 12:43:07,599 | INFO     | pilot state: failed 
[2025-05-29 05:43:20] 2025-05-29 12:43:07,599 | INFO     | transexitcode: 65
[2025-05-29 05:43:20] 2025-05-29 12:43:07,599 | INFO     | exeerrorcode: 65
[2025-05-29 05:43:20] 2025-05-29 12:43:07,599 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-29 05:43:20] 2025-05-29 12:43:07,600 | INFO     | exitcode: 65
[2025-05-29 05:43:20] 2025-05-29 12:43:07,600 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-29 05:43:20] 2025-05-29 12:43:07,600 | INFO     | cpuconsumptiontime: 16 s
[2025-05-29 05:43:20] 2025-05-29 12:43:07,600 | INFO     | nevents: 0
[2025-05-29 05:43:20] 2025-05-29 12:43:07,600 | INFO     | neventsw: 0
[2025-05-29 05:43:20] 2025-05-29 12:43:07,600 | INFO     | pid: 2415215
[2025-05-29 05:43:20] 2025-05-29 12:43:07,600 | INFO     | pgrp: 2415215
[2025-05-29 05:43:20] 2025-05-29 12:43:07,600 | INFO     | corecount: 12
[2025-05-29 05:43:20] 2025-05-29 12:43:07,600 | INFO     | event service: False
[2025-05-29 05:43:20] 2025-05-29 12:43:07,600 | INFO     | sizes: {0: 2405179, 3: 2405385, 11: 2405413, 27: 2432976, 28: 2432976, 150: 2433118}
[2025-05-29 05:43:20] 2025-05-29 12:43:07,600 | INFO     | --------------------------------------------------
[2025-05-29 05:43:20] 2025-05-29 12:43:07,600 | INFO     | 
[2025-05-29 05:43:20] 2025-05-29 12:43:07,600 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-29 05:43:20] 2025-05-29 12:43:07,615 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,615 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,615 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,615 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,615 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,615 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,615 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,615 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,615 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,616 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,616 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,616 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,616 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,616 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,616 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,616 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,616 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,616 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 05:43:20] 2025-05-29 12:43:07,616 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,616 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 05:43:20] 2025-05-29 12:43:07,616 | INFO     | job 6669999922 has completed (purged errors)
[2025-05-29 05:43:20] 2025-05-29 12:43:07,616 | INFO     | overall cleanup function is called
[2025-05-29 05:43:20] 2025-05-29 12:43:08,622 | INFO     | --- collectZombieJob: --- 10, [2415215]
[2025-05-29 05:43:20] 2025-05-29 12:43:08,622 | INFO     | zombie collector waiting for pid 2415215
[2025-05-29 05:43:20] 2025-05-29 12:43:08,622 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 05:43:20] 2025-05-29 12:43:08,622 | INFO     | collected zombie processes
[2025-05-29 05:43:20] 2025-05-29 12:43:08,622 | INFO     | will attempt to kill all subprocesses of pid=2415215
[2025-05-29 05:43:20] 2025-05-29 12:43:08,760 | INFO     | process IDs to be killed: [2415215] (in reverse order)
[2025-05-29 05:43:20] 2025-05-29 12:43:08,813 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 05:43:20] 2025-05-29 12:43:08,814 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 05:43:20] 2025-05-29 12:43:08,819 | INFO     | did not find any defunct processes belonging to 2415215
[2025-05-29 05:43:20] 2025-05-29 12:43:08,824 | INFO     | did not find any defunct processes belonging to 2415215
[2025-05-29 05:43:20] 2025-05-29 12:43:08,824 | INFO     | ready for new job
[2025-05-29 05:43:20] 2025-05-29 12:43:08,824 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 05:43:20] 2025-05-29 12:43:08,826 | INFO     | **************************************
[2025-05-29 05:43:20] 2025-05-29 12:43:08,826 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 05:43:20] 2025-05-29 12:43:08,826 | INFO     | **************************************
[2025-05-29 05:43:20] 2025-05-29 12:43:08,826 | INFO     | 
[2025-05-29 05:43:20] 2025-05-29 12:43:08,828 | INFO     | architecture information:
[2025-05-29 05:43:20] 2025-05-29 12:43:08,828 | INFO     | executing command: cat /etc/os-release
[2025-05-29 05:43:20] 2025-05-29 12:43:08,842 | INFO     | cat /etc/os-release:
[2025-05-29 05:43:20] NAME="CentOS Linux"
[2025-05-29 05:43:20] VERSION="7 (Core)"
[2025-05-29 05:43:20] ID="centos"
[2025-05-29 05:43:20] ID_LIKE="rhel fedora"
[2025-05-29 05:43:20] VERSION_ID="7"
[2025-05-29 05:43:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 05:43:20] ANSI_COLOR="0;31"
[2025-05-29 05:43:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 05:43:20] HOME_URL="https://www.centos.org/"
[2025-05-29 05:43:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 05:43:20] 
[2025-05-29 05:43:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 05:43:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 05:43:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 05:43:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 05:43:20] 
[2025-05-29 05:43:20] 2025-05-29 12:43:08,842 | INFO     | **************************************
[2025-05-29 05:43:20] 2025-05-29 12:43:09,345 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-29 05:43:20] 2025-05-29 12:43:09,358 | INFO     | sufficient remaining disk space (1917356867584 B)
[2025-05-29 05:43:20] 2025-05-29 12:43:09,358 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 05:43:20] 2025-05-29 12:43:09,358 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 05:43:20] 2025-05-29 12:43:09,358 | INFO     | update_server=False
[2025-05-29 05:43:20] 2025-05-29 12:43:09,358 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 05:43:20] 2025-05-29 12:43:09,359 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 05:43:20] 2025-05-29 12:43:09,359 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 05:43:20] 2025-05-29 12:43:09,363 | INFO     | all payload control threads have been joined
[2025-05-29 05:43:20] 2025-05-29 12:43:10,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 05:43:20] 2025-05-29 12:43:10,024 | INFO     | aborting loop
[2025-05-29 05:43:20] 2025-05-29 12:43:10,103 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 05:43:20] 2025-05-29 12:43:10,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 05:43:20] 2025-05-29 12:43:10,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 05:43:20] 2025-05-29 12:43:10,359 | INFO     | [job] retrieve thread has finished
[2025-05-29 05:43:20] 2025-05-29 12:43:10,365 | INFO     | [job] queue monitor thread has finished
[2025-05-29 05:43:20] 2025-05-29 12:43:10,368 | INFO     | [payload] control thread has finished
[2025-05-29 05:43:20] 2025-05-29 12:43:10,414 | INFO     | all data control threads have been joined
[2025-05-29 05:43:20] 2025-05-29 12:43:10,420 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 05:43:20] 2025-05-29 12:43:10,431 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 05:43:20] 2025-05-29 12:43:10,678 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 05:43:20] 2025-05-29 12:43:10,843 | INFO     | [payload] failed_post thread has finished
[2025-05-29 05:43:20] 2025-05-29 12:43:10,909 | INFO     | [data] copytool_in thread has finished
[2025-05-29 05:43:20] 2025-05-29 12:43:10,991 | INFO     | [payload] validate_post thread has finished
[2025-05-29 05:43:20] 2025-05-29 12:43:11,003 | INFO     | all job control threads have been joined
[2025-05-29 05:43:20] 2025-05-29 12:43:11,029 | INFO     | [job] job monitor thread has finished
[2025-05-29 05:43:20] 2025-05-29 12:43:11,419 | INFO     | [data] control thread has finished
[2025-05-29 05:43:20] 2025-05-29 12:43:11,513 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 05:43:20] 2025-05-29 12:43:11,799 | INFO     | [job] validate thread has finished
[2025-05-29 05:43:20] 2025-05-29 12:43:11,829 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 05:43:20] 2025-05-29 12:43:12,008 | INFO     | [job] control thread has finished
[2025-05-29 05:43:20] 2025-05-29 12:43:12,684 | INFO     | [data] copytool_out thread has finished
[2025-05-29 05:43:20] 2025-05-29 12:43:13,366 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 05:43:20] 2025-05-29 12:43:15,279 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974820886336)>', '<ExcThread(monitor, started 139974410213120)>']
[2025-05-29 05:43:20] 2025-05-29 12:43:16,137 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 05:43:20] 2025-05-29 12:43:16,137 | INFO     | [monitor] control thread has ended
[2025-05-29 05:43:20] 2025-05-29 12:43:20,304 | INFO     | all workflow threads have been joined
[2025-05-29 05:43:20] 2025-05-29 12:43:20,304 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 05:43:20] 2025-05-29 12:43:20,305 | INFO     | traces error code: 0
[2025-05-29 05:43:20] 2025-05-29 12:43:20,305 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 05:43:20] 2025-05-29 12:43:20,439 [wrapper] ==== pilot stdout END ====
[2025-05-29 05:43:20] 2025-05-29 12:43:20,442 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 05:43:20] 2025-05-29 12:43:20,444 [wrapper] pilotpid: 2408907
[2025-05-29 05:43:20] 2025-05-29 12:43:20,446 [wrapper] Pilot exit status: 0
[2025-05-29 05:43:20] 2025-05-29 12:43:20,454 [wrapper] pandaids: 6669999922
[2025-05-29 05:43:20] 2025-05-29 12:43:20,489 [wrapper] cleanup supervisor_pilot 2408913 2408908
[2025-05-29 05:43:20] 2025-05-29 12:43:20,492 [wrapper] Test setup, not cleaning
[2025-05-29 05:43:20] 2025-05-29 12:43:20,494 [wrapper] apfmon messages muted
[2025-05-29 05:43:20] 2025-05-29 12:43:20,496 [wrapper] ==== wrapper stdout END ====
[2025-05-29 05:43:20] 2025-05-29 12:43:20,499 [wrapper] ==== wrapper stderr END ====
[2025-05-29 05:43:20]  *** Error codes and diagnostics ***
[2025-05-29 05:43:20]     "exeErrorCode": 65,
[2025-05-29 05:43:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-29 05:43:20]     "pilotErrorCode": 1305,
[2025-05-29 05:43:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-29 05:43:20]  *** Listing of results directory ***
[2025-05-29 05:43:20] total 224192
[2025-05-29 05:43:20] -rw-r--r--. 1 boinc boinc    495897 May 29 02:21 pilot3.tar.gz
[2025-05-29 05:43:20] -rwx------. 1 boinc boinc     37140 May 29 02:28 runpilot2-wrapper.sh
[2025-05-29 05:43:20] -rw-r--r--. 1 boinc boinc      5111 May 29 02:28 queuedata.json
[2025-05-29 05:43:20] -rw-r--r--. 1 boinc boinc       100 May 29 05:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 05:43:20] -rwxr-xr-x. 1 boinc boinc      7986 May 29 05:40 run_atlas
[2025-05-29 05:43:20] -rw-r--r--. 1 boinc boinc       105 May 29 05:40 job.xml
[2025-05-29 05:43:20] -rw-r--r--. 1 boinc boinc      6602 May 29 05:40 init_data.xml
[2025-05-29 05:43:20] -rw-r--r--. 2 boinc boinc 225541436 May 29 05:40 EVNT.44871834._000912.pool.root.1
[2025-05-29 05:43:20] -rw-r--r--. 2 boinc boinc     15093 May 29 05:40 start_atlas.sh
[2025-05-29 05:43:20] drwxrwx--x. 2 boinc boinc      4096 May 29 05:40 shared
[2025-05-29 05:43:20] -rw-r--r--. 2 boinc boinc    508879 May 29 05:40 input.tar.gz
[2025-05-29 05:43:20] -rw-r--r--. 1 boinc boinc         0 May 29 05:40 boinc_lockfile
[2025-05-29 05:43:20] -rw-r--r--. 1 boinc boinc      2558 May 29 05:40 pandaJob.out
[2025-05-29 05:43:20] -rw-------. 1 boinc boinc    992820 May 29 05:40 agis_schedconf.cvmfs.json
[2025-05-29 05:43:20] -rw-------. 1 boinc boinc   1603667 May 29 05:40 agis_ddmendpoints.agis.ALL.json
[2025-05-29 05:43:20] drwx------. 4 boinc boinc      4096 May 29 05:40 pilot3
[2025-05-29 05:43:20] -rw-r--r--. 1 boinc boinc       521 May 29 05:40 boinc_task_state.xml
[2025-05-29 05:43:20] -rw-------. 1 boinc boinc       954 May 29 05:41 memory_monitor_summary.json
[2025-05-29 05:43:20] -rw-------. 1 boinc boinc     20546 May 29 05:41 log.44871837._098330.job.log.tgz.1
[2025-05-29 05:43:20] -rw-------. 1 boinc boinc        95 May 29 05:42 pilot_heartbeat.json
[2025-05-29 05:43:20] -rw-------. 1 boinc boinc      8324 May 29 05:43 heartbeat.json
[2025-05-29 05:43:20] -rw-r--r--. 1 boinc boinc        22 May 29 05:43 wrapper_checkpoint.txt
[2025-05-29 05:43:20] -rw-r--r--. 1 boinc boinc      8192 May 29 05:43 boinc_mmap_file
[2025-05-29 05:43:20] -rw-------. 1 boinc boinc      4352 May 29 05:43 pilotlog.txt
[2025-05-29 05:43:20] -rw-------. 1 boinc boinc     73718 May 29 05:43 log.44871837._098330.job.log.1
[2025-05-29 05:43:20] -rw-------. 1 boinc boinc       188 May 29 05:43 output.list
[2025-05-29 05:43:20] -rw-r--r--. 1 boinc boinc       620 May 29 05:43 runtime_log
[2025-05-29 05:43:20] -rw-------. 1 boinc boinc    112640 May 29 05:43 result.tar.gz
[2025-05-29 05:43:20] -rw-r--r--. 1 boinc boinc      8484 May 29 05:43 runtime_log.err
[2025-05-29 05:43:20] -rw-------. 1 boinc boinc       645 May 29 05:43 jAILDmOkoe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmf0UKDmSR71am.diag
[2025-05-29 05:43:20] -rw-r--r--. 1 boinc boinc     21425 May 29 05:43 stderr.txt
[2025-05-29 05:43:20] No HITS result produced
[2025-05-29 05:43:20]  *** Contents of shared directory: ***
[2025-05-29 05:43:20] total 220888
[2025-05-29 05:43:20] -rw-r--r--. 2 boinc boinc 225541436 May 29 05:40 ATLAS.root_0
[2025-05-29 05:43:20] -rw-r--r--. 2 boinc boinc     15093 May 29 05:40 start_atlas.sh
[2025-05-29 05:43:20] -rw-r--r--. 2 boinc boinc    508879 May 29 05:40 input.tar.gz
[2025-05-29 05:43:20] -rw-------. 1 boinc boinc    112640 May 29 05:43 result.tar.gz
05:43:22 (2405350): run_atlas exited; CPU time 20.131927
05:43:22 (2405350): called boinc_finish(0)

</stderr_txt>
]]>

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