Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:37:26 (3266870): wrapper (7.7.26015): starting
05:37:26 (3266870): wrapper: running run_atlas (--nthreads 12)
[2025-05-29 05:37:26] Arguments: --nthreads 12
[2025-05-29 05:37:26] Threads: 12
[2025-05-29 05:37:26] Checking for CVMFS
[2025-05-29 05:37:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 05:37:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 05:37:26] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 05:37:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 05:37:26] 2.11.3.0 1134433 15045 247432 146562 1 277 43414891 45568001 8702 130560 0 202252090 99.843 95618191 26438 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-29 05:37:26] CVMFS is ok
[2025-05-29 05:37:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-29 05:37:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-29 05:37:26] Further information can be found at the LHC@home message board.
[2025-05-29 05:37:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 05:37:26] Checking for apptainer binary...
[2025-05-29 05:37:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 05:37:26] Running /usr/bin/apptainer --version
[2025-05-29 05:37:26] apptainer version 1.3.3-1.el9
[2025-05-29 05:37:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 05:37:26] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0171.triumf.lcg
[2025-05-29 05:37:26] apptainer works
[2025-05-29 05:37:26] Set ATHENA_PROC_NUMBER=12
[2025-05-29 05:37:26] Set ATHENA_CORE_NUMBER=12
[2025-05-29 05:37:26] Starting ATLAS job with PandaID=6669677783
[2025-05-29 05:37:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 05:40:20]  *** The last 200 lines of the pilot log: ***
[2025-05-29 05:40:20] 2025-05-29 12:40:06,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 05:40:20] 2025-05-29 12:40:06,846 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 05:40:20] 2025-05-29 12:40:06,846 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | WARNING  | found no stored workdir sizes
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | INFO     | will not add max space = 0 B to job metrics
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | WARNING  | wrong length of table data, x=[1748522273.0], y=[2266.0] (must be same and length>=4)
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | INFO     | ..............................
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | INFO     | . Timing measurements:
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | INFO     | . get job = 0 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | INFO     | . initial setup = 2 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | INFO     | . payload setup = 3 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | . stage-in = 0 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | . payload execution = 12 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | . stage-out = 0 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | . log creation = 0 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | ..............................
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669677783/pilotlog.txt
[2025-05-29 05:40:20] 2025-05-29 12:40:06,859 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-29 05:40:20] - Log from pilotlog.txt -
[2025-05-29 05:40:20] 2025-05-29 12:40:06,846 | INFO     | extracted standard info from prmon json
[2025-05-29 05:40:20] 2025-05-29 12:40:06,846 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 05:40:20] 2025-05-29 12:40:06,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 05:40:20] 2025-05-29 12:40:06,846 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 05:40:20] 2025-05-29 12:40:06,846 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | WARNING  | found no stored workdir sizes
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | INFO     | will not add max space = 0 B to job metrics
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | WARNING  | wrong length of table data, x=[1748522273.0], y=[2266.0] (must be same and length>=4)
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | INFO     | ..............................
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | INFO     | . Timing measurements:
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | INFO     | . get job = 0 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | INFO     | . initial setup = 2 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | INFO     | . payload setup = 3 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | . stage-in = 0 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | . payload execution = 12 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | . stage-out = 0 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | . log creation = 0 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | ..............................
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669677783/pilotlog.txt
[2025-05-29 05:40:20] 2025-05-29 12:40:06,859 | WARNING  | 
[2025-05-29 05:40:20] [begin log extracts]
[2025-05-29 05:40:20] - Log from pilotlog.txt -
[2025-05-29 05:40:20] 2025-05-29 12:40:06,846 | INFO     | extracted standard info from prmon json
[2025-05-29 05:40:20] 2025-05-29 12:40:06,846 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 05:40:20] 2025-05-29 12:40:06,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 05:40:20] 2025-05-29 12:40:06,846 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 05:40:20] 2025-05-29 12:40:06,846 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | WARNING  | found no stored workdir sizes
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | INFO     | will not add max space = 0 B to job metrics
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | WARNING  | wrong length of table data, x=[1748522273.0], y=[2266.0] (must be same and length>=4)
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | INFO     | ..............................
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | INFO     | . Timing measurements:
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | INFO     | . get job = 0 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | INFO     | . initial setup = 2 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,847 | INFO     | . payload setup = 3 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | . stage-in = 0 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | . payload execution = 12 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | . stage-out = 0 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | . log creation = 0 s
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | ..............................
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-29 05:40:20] 2025-05-29 12:40:06,848 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669677783/pilotlog.txt
[2025-05-29 05:40:20] [end log extracts]
[2025-05-29 05:40:20] 2025-05-29 12:40:06,860 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-29 05:40:20] 2025-05-29 12:40:06,860 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-29 05:40:20] 2025-05-29 12:40:07,354 | INFO     | 
[2025-05-29 05:40:20] 2025-05-29 12:40:07,354 | INFO     | job summary report
[2025-05-29 05:40:20] 2025-05-29 12:40:07,354 | INFO     | --------------------------------------------------
[2025-05-29 05:40:20] 2025-05-29 12:40:07,354 | INFO     | PanDA job id: 6669677783
[2025-05-29 05:40:20] 2025-05-29 12:40:07,354 | INFO     | task id: 44871837
[2025-05-29 05:40:20] 2025-05-29 12:40:07,354 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-29 05:37:59,452 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-29 05:40:20] 2025-05-29 12:40:07,354 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 05:40:20] 2025-05-29 12:40:07,354 | INFO     | pilot state: failed 
[2025-05-29 05:40:20] 2025-05-29 12:40:07,354 | INFO     | transexitcode: 65
[2025-05-29 05:40:20] 2025-05-29 12:40:07,354 | INFO     | exeerrorcode: 65
[2025-05-29 05:40:20] 2025-05-29 12:40:07,354 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-29 05:40:20] 2025-05-29 12:40:07,354 | INFO     | exitcode: 65
[2025-05-29 05:40:20] 2025-05-29 12:40:07,354 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-29 05:40:20] 2025-05-29 12:40:07,354 | INFO     | cpuconsumptiontime: 13 s
[2025-05-29 05:40:20] 2025-05-29 12:40:07,354 | INFO     | nevents: 0
[2025-05-29 05:40:20] 2025-05-29 12:40:07,354 | INFO     | neventsw: 0
[2025-05-29 05:40:20] 2025-05-29 12:40:07,354 | INFO     | pid: 3276735
[2025-05-29 05:40:20] 2025-05-29 12:40:07,354 | INFO     | pgrp: 3276735
[2025-05-29 05:40:20] 2025-05-29 12:40:07,355 | INFO     | corecount: 12
[2025-05-29 05:40:20] 2025-05-29 12:40:07,355 | INFO     | event service: False
[2025-05-29 05:40:20] 2025-05-29 12:40:07,355 | INFO     | sizes: {0: 2405010, 1: 2405209, 3: 2405415, 11: 2405443, 19: 2428532, 20: 2432923, 139: 2433037}
[2025-05-29 05:40:20] 2025-05-29 12:40:07,355 | INFO     | --------------------------------------------------
[2025-05-29 05:40:20] 2025-05-29 12:40:07,355 | INFO     | 
[2025-05-29 05:40:20] 2025-05-29 12:40:07,355 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-29 05:40:20] 2025-05-29 12:40:07,367 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 05:40:20] 2025-05-29 12:40:07,368 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 05:40:20] 2025-05-29 12:40:07,368 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 05:40:20] 2025-05-29 12:40:07,368 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 05:40:20] 2025-05-29 12:40:07,368 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 05:40:20] 2025-05-29 12:40:07,368 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 05:40:20] 2025-05-29 12:40:07,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 05:40:20] 2025-05-29 12:40:07,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 05:40:20] 2025-05-29 12:40:07,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 05:40:20] 2025-05-29 12:40:07,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 05:40:20] 2025-05-29 12:40:07,368 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 05:40:20] 2025-05-29 12:40:07,368 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 05:40:20] 2025-05-29 12:40:07,368 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 05:40:20] 2025-05-29 12:40:07,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 05:40:20] 2025-05-29 12:40:07,368 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 05:40:20] 2025-05-29 12:40:07,368 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 05:40:20] 2025-05-29 12:40:07,368 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 05:40:20] 2025-05-29 12:40:07,368 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 05:40:20] 2025-05-29 12:40:07,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 05:40:20] 2025-05-29 12:40:07,369 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 05:40:20] 2025-05-29 12:40:07,369 | INFO     | job 6669677783 has completed (purged errors)
[2025-05-29 05:40:20] 2025-05-29 12:40:07,369 | INFO     | overall cleanup function is called
[2025-05-29 05:40:20] 2025-05-29 12:40:08,375 | INFO     | --- collectZombieJob: --- 10, [3276735]
[2025-05-29 05:40:20] 2025-05-29 12:40:08,375 | INFO     | zombie collector waiting for pid 3276735
[2025-05-29 05:40:20] 2025-05-29 12:40:08,375 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 05:40:20] 2025-05-29 12:40:08,375 | INFO     | collected zombie processes
[2025-05-29 05:40:20] 2025-05-29 12:40:08,375 | INFO     | will attempt to kill all subprocesses of pid=3276735
[2025-05-29 05:40:20] 2025-05-29 12:40:08,474 | INFO     | process IDs to be killed: [3276735] (in reverse order)
[2025-05-29 05:40:20] 2025-05-29 12:40:08,512 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 05:40:20] 2025-05-29 12:40:08,512 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 05:40:20] 2025-05-29 12:40:08,516 | INFO     | did not find any defunct processes belonging to 3276735
[2025-05-29 05:40:20] 2025-05-29 12:40:08,520 | INFO     | did not find any defunct processes belonging to 3276735
[2025-05-29 05:40:20] 2025-05-29 12:40:08,521 | INFO     | ready for new job
[2025-05-29 05:40:20] 2025-05-29 12:40:08,521 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 05:40:20] 2025-05-29 12:40:08,522 | INFO     | **************************************
[2025-05-29 05:40:20] 2025-05-29 12:40:08,522 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 05:40:20] 2025-05-29 12:40:08,522 | INFO     | **************************************
[2025-05-29 05:40:20] 2025-05-29 12:40:08,522 | INFO     | 
[2025-05-29 05:40:20] 2025-05-29 12:40:08,536 | INFO     | architecture information:
[2025-05-29 05:40:20] 2025-05-29 12:40:08,537 | INFO     | executing command: cat /etc/os-release
[2025-05-29 05:40:20] 2025-05-29 12:40:08,547 | INFO     | cat /etc/os-release:
[2025-05-29 05:40:20] NAME="CentOS Linux"
[2025-05-29 05:40:20] VERSION="7 (Core)"
[2025-05-29 05:40:20] ID="centos"
[2025-05-29 05:40:20] ID_LIKE="rhel fedora"
[2025-05-29 05:40:20] VERSION_ID="7"
[2025-05-29 05:40:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 05:40:20] ANSI_COLOR="0;31"
[2025-05-29 05:40:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 05:40:20] HOME_URL="https://www.centos.org/"
[2025-05-29 05:40:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 05:40:20] 
[2025-05-29 05:40:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 05:40:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 05:40:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 05:40:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 05:40:20] 
[2025-05-29 05:40:20] 2025-05-29 12:40:08,547 | INFO     | **************************************
[2025-05-29 05:40:20] 2025-05-29 12:40:09,050 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-29 05:40:20] 2025-05-29 12:40:09,061 | INFO     | sufficient remaining disk space (2536331280384 B)
[2025-05-29 05:40:20] 2025-05-29 12:40:09,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 05:40:20] 2025-05-29 12:40:09,062 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 05:40:20] 2025-05-29 12:40:09,062 | INFO     | update_server=False
[2025-05-29 05:40:20] 2025-05-29 12:40:09,062 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 05:40:20] 2025-05-29 12:40:09,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 05:40:20] 2025-05-29 12:40:09,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 05:40:20] 2025-05-29 12:40:09,062 | INFO     | aborting loop
[2025-05-29 05:40:20] 2025-05-29 12:40:09,143 | INFO     | all data control threads have been joined
[2025-05-29 05:40:20] 2025-05-29 12:40:09,722 | INFO     | PID=3270434 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-29 05:40:20] 2025-05-29 12:40:09,722 | INFO     | .. there are 7 such processes running
[2025-05-29 05:40:20] 2025-05-29 12:40:09,722 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 05:40:20] 2025-05-29 12:40:09,722 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 05:40:20] 2025-05-29 12:40:09,722 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 05:40:20] 2025-05-29 12:40:10,017 | INFO     | all payload control threads have been joined
[2025-05-29 05:40:20] 2025-05-29 12:40:10,067 | INFO     | [job] retrieve thread has finished
[2025-05-29 05:40:20] 2025-05-29 12:40:10,067 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 05:40:20] 2025-05-29 12:40:10,068 | INFO     | [job] job monitor thread has finished
[2025-05-29 05:40:20] 2025-05-29 12:40:10,148 | INFO     | [data] control thread has finished
[2025-05-29 05:40:20] 2025-05-29 12:40:10,153 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 05:40:20] 2025-05-29 12:40:10,443 | INFO     | all job control threads have been joined
[2025-05-29 05:40:20] 2025-05-29 12:40:10,573 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 05:40:20] 2025-05-29 12:40:10,876 | INFO     | [payload] failed_post thread has finished
[2025-05-29 05:40:20] 2025-05-29 12:40:10,927 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 05:40:20] 2025-05-29 12:40:11,023 | INFO     | [payload] control thread has finished
[2025-05-29 05:40:20] 2025-05-29 12:40:11,068 | INFO     | [data] copytool_out thread has finished
[2025-05-29 05:40:20] 2025-05-29 12:40:11,245 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 05:40:20] 2025-05-29 12:40:11,301 | INFO     | [data] copytool_in thread has finished
[2025-05-29 05:40:20] 2025-05-29 12:40:11,419 | INFO     | [job] validate thread has finished
[2025-05-29 05:40:20] 2025-05-29 12:40:11,449 | INFO     | [job] control thread has finished
[2025-05-29 05:40:20] 2025-05-29 12:40:11,602 | INFO     | [payload] validate_post thread has finished
[2025-05-29 05:40:20] 2025-05-29 12:40:11,921 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 05:40:20] 2025-05-29 12:40:12,926 | INFO     | [job] queue monitor thread has finished
[2025-05-29 05:40:20] 2025-05-29 12:40:14,932 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 05:40:20] 2025-05-29 12:40:15,640 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140521904301888)>', '<ExcThread(monitor, started 140521372632832)>']
[2025-05-29 05:40:20] 2025-05-29 12:40:15,752 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 05:40:20] 2025-05-29 12:40:15,752 | INFO     | [monitor] control thread has ended
[2025-05-29 05:40:20] 2025-05-29 12:40:20,666 | INFO     | all workflow threads have been joined
[2025-05-29 05:40:20] 2025-05-29 12:40:20,667 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 05:40:20] 2025-05-29 12:40:20,667 | INFO     | traces error code: 0
[2025-05-29 05:40:20] 2025-05-29 12:40:20,667 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 05:40:20] 2025-05-29 12:40:20,804 [wrapper] ==== pilot stdout END ====
[2025-05-29 05:40:20] 2025-05-29 12:40:20,806 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 05:40:20] 2025-05-29 12:40:20,808 [wrapper] pilotpid: 3270434
[2025-05-29 05:40:20] 2025-05-29 12:40:20,809 [wrapper] Pilot exit status: 0
[2025-05-29 05:40:20] 2025-05-29 12:40:20,815 [wrapper] pandaids: 6669677783
[2025-05-29 05:40:20] 2025-05-29 12:40:20,838 [wrapper] cleanup supervisor_pilot 3270440 3270435
[2025-05-29 05:40:20] 2025-05-29 12:40:20,840 [wrapper] Test setup, not cleaning
[2025-05-29 05:40:20] 2025-05-29 12:40:20,841 [wrapper] apfmon messages muted
[2025-05-29 05:40:20] 2025-05-29 12:40:20,843 [wrapper] ==== wrapper stdout END ====
[2025-05-29 05:40:20] 2025-05-29 12:40:20,844 [wrapper] ==== wrapper stderr END ====
[2025-05-29 05:40:20]  *** Error codes and diagnostics ***
[2025-05-29 05:40:20]     "exeErrorCode": 65,
[2025-05-29 05:40:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-29 05:40:20]     "pilotErrorCode": 1305,
[2025-05-29 05:40:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-29 05:40:20]  *** Listing of results directory ***
[2025-05-29 05:40:20] total 223504
[2025-05-29 05:40:20] -rw-r--r--. 1 boinc boinc    495897 May 29 02:21 pilot3.tar.gz
[2025-05-29 05:40:20] -rwx------. 1 boinc boinc     37140 May 29 02:21 runpilot2-wrapper.sh
[2025-05-29 05:40:20] -rw-r--r--. 1 boinc boinc      5111 May 29 02:21 queuedata.json
[2025-05-29 05:40:20] -rw-r--r--. 1 boinc boinc       100 May 29 05:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 05:40:20] -rwxr-xr-x. 1 boinc boinc      7986 May 29 05:37 run_atlas
[2025-05-29 05:40:20] -rw-r--r--. 1 boinc boinc       105 May 29 05:37 job.xml
[2025-05-29 05:40:20] -rw-r--r--. 1 boinc boinc      6617 May 29 05:37 init_data.xml
[2025-05-29 05:40:20] -rw-r--r--. 2 boinc boinc 224844096 May 29 05:37 EVNT.44871834._001072.pool.root.1
[2025-05-29 05:40:20] -rw-r--r--. 2 boinc boinc     15093 May 29 05:37 start_atlas.sh
[2025-05-29 05:40:20] drwxrwx--x. 2 boinc boinc      4096 May 29 05:37 shared
[2025-05-29 05:40:20] -rw-r--r--. 2 boinc boinc    508875 May 29 05:37 input.tar.gz
[2025-05-29 05:40:20] -rw-r--r--. 1 boinc boinc         0 May 29 05:37 boinc_lockfile
[2025-05-29 05:40:20] -rw-r--r--. 1 boinc boinc      2559 May 29 05:37 pandaJob.out
[2025-05-29 05:40:20] -rw-------. 1 boinc boinc    992820 May 29 05:37 agis_schedconf.cvmfs.json
[2025-05-29 05:40:20] -rw-------. 1 boinc boinc   1603667 May 29 05:37 agis_ddmendpoints.agis.ALL.json
[2025-05-29 05:40:20] drwx------. 4 boinc boinc      4096 May 29 05:37 pilot3
[2025-05-29 05:40:20] -rw-------. 1 boinc boinc       946 May 29 05:38 memory_monitor_summary.json
[2025-05-29 05:40:20] -rw-r--r--. 1 boinc boinc       521 May 29 05:38 boinc_task_state.xml
[2025-05-29 05:40:20] -rw-------. 1 boinc boinc     20286 May 29 05:38 log.44871837._098151.job.log.tgz.1
[2025-05-29 05:40:20] -rw-------. 1 boinc boinc        95 May 29 05:39 pilot_heartbeat.json
[2025-05-29 05:40:20] -rw-------. 1 boinc boinc      8334 May 29 05:40 heartbeat.json
[2025-05-29 05:40:20] -rw-r--r--. 1 boinc boinc      8192 May 29 05:40 boinc_mmap_file
[2025-05-29 05:40:20] -rw-r--r--. 1 boinc boinc        22 May 29 05:40 wrapper_checkpoint.txt
[2025-05-29 05:40:20] -rw-------. 1 boinc boinc      4746 May 29 05:40 pilotlog.txt
[2025-05-29 05:40:20] -rw-------. 1 boinc boinc     72911 May 29 05:40 log.44871837._098151.job.log.1
[2025-05-29 05:40:20] -rw-------. 1 boinc boinc       188 May 29 05:40 output.list
[2025-05-29 05:40:20] -rw-r--r--. 1 boinc boinc       620 May 29 05:40 runtime_log
[2025-05-29 05:40:20] -rw-------. 1 boinc boinc    112640 May 29 05:40 result.tar.gz
[2025-05-29 05:40:20] -rw-r--r--. 1 boinc boinc      8649 May 29 05:40 runtime_log.err
[2025-05-29 05:40:20] -rw-------. 1 boinc boinc       644 May 29 05:40 9QfKDmjdoe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmlzUKDmxUyT5m.diag
[2025-05-29 05:40:20] -rw-r--r--. 1 boinc boinc     21714 May 29 05:40 stderr.txt
[2025-05-29 05:40:20] No HITS result produced
[2025-05-29 05:40:20]  *** Contents of shared directory: ***
[2025-05-29 05:40:20] total 220204
[2025-05-29 05:40:20] -rw-r--r--. 2 boinc boinc 224844096 May 29 05:37 ATLAS.root_0
[2025-05-29 05:40:20] -rw-r--r--. 2 boinc boinc     15093 May 29 05:37 start_atlas.sh
[2025-05-29 05:40:20] -rw-r--r--. 2 boinc boinc    508875 May 29 05:37 input.tar.gz
[2025-05-29 05:40:20] -rw-------. 1 boinc boinc    112640 May 29 05:40 result.tar.gz
05:40:21 (3266870): run_atlas exited; CPU time 15.918375
05:40:21 (3266870): called boinc_finish(0)

</stderr_txt>
]]>

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