Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:16:49 (3019622): wrapper (7.7.26015): starting
05:16:49 (3019622): wrapper: running run_atlas (--nthreads 12)
[2025-05-29 05:16:49] Arguments: --nthreads 12
[2025-05-29 05:16:49] Threads: 12
[2025-05-29 05:16:49] Checking for CVMFS
[2025-05-29 05:16:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 05:16:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 05:16:49] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 05:16:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 05:16:50] 2.11.5.0 3906668 24453 335608 146562 2 257 41247064 45568000 14356 130560 0 209786766 99.762 154958287 15339 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-29 05:16:50] CVMFS is ok
[2025-05-29 05:16:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-29 05:16:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-29 05:16:50] Further information can be found at the LHC@home message board.
[2025-05-29 05:16:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 05:16:50] Checking for apptainer binary...
[2025-05-29 05:16:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 05:16:50] Running /usr/bin/apptainer --version
[2025-05-29 05:16:50] apptainer version 1.4.0-1.el9
[2025-05-29 05:16:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 05:16:50] wns0079.triumf.lcg
[2025-05-29 05:16:50] apptainer works
[2025-05-29 05:16:50] Set ATHENA_PROC_NUMBER=12
[2025-05-29 05:16:50] Set ATHENA_CORE_NUMBER=12
[2025-05-29 05:16:50] Starting ATLAS job with PandaID=6669624193
[2025-05-29 05:16:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 05:19:50]  *** The last 200 lines of the pilot log: ***
[2025-05-29 05:19:50] 2025-05-29 12:19:35,988 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 05:19:50] 2025-05-29 12:19:35,989 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 05:19:50] 2025-05-29 12:19:35,989 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 05:19:50] 2025-05-29 12:19:35,989 | WARNING  | found no stored workdir sizes
[2025-05-29 05:19:50] 2025-05-29 12:19:35,989 | INFO     | will not add max space = 0 B to job metrics
[2025-05-29 05:19:50] 2025-05-29 12:19:35,989 | WARNING  | wrong length of table data, x=[1748521040.0], y=[1287.0] (must be same and length>=4)
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | ..............................
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . Timing measurements:
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . get job = 0 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . initial setup = 2 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . payload setup = 4 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . stage-in = 0 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . payload execution = 15 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . stage-out = 0 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . log creation = 0 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | ..............................
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669624193/pilotlog.txt
[2025-05-29 05:19:50] 2025-05-29 12:19:36,002 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-29 05:19:50] - Log from pilotlog.txt -
[2025-05-29 05:19:50] 2025-05-29 12:19:35,988 | INFO     | extracted standard info from prmon json
[2025-05-29 05:19:50] 2025-05-29 12:19:35,988 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 05:19:50] 2025-05-29 12:19:35,988 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 05:19:50] 2025-05-29 12:19:35,989 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 05:19:50] 2025-05-29 12:19:35,989 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 05:19:50] 2025-05-29 12:19:35,989 | WARNING  | found no stored workdir sizes
[2025-05-29 05:19:50] 2025-05-29 12:19:35,989 | INFO     | will not add max space = 0 B to job metrics
[2025-05-29 05:19:50] 2025-05-29 12:19:35,989 | WARNING  | wrong length of table data, x=[1748521040.0], y=[1287.0] (must be same and length>=4)
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | ..............................
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . Timing measurements:
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . get job = 0 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . initial setup = 2 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . payload setup = 4 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . stage-in = 0 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . payload execution = 15 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . stage-out = 0 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . log creation = 0 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | ..............................
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669624193/pilotlog.txt
[2025-05-29 05:19:50] 2025-05-29 12:19:36,002 | WARNING  | 
[2025-05-29 05:19:50] [begin log extracts]
[2025-05-29 05:19:50] - Log from pilotlog.txt -
[2025-05-29 05:19:50] 2025-05-29 12:19:35,988 | INFO     | extracted standard info from prmon json
[2025-05-29 05:19:50] 2025-05-29 12:19:35,988 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 05:19:50] 2025-05-29 12:19:35,988 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 05:19:50] 2025-05-29 12:19:35,989 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 05:19:50] 2025-05-29 12:19:35,989 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 05:19:50] 2025-05-29 12:19:35,989 | WARNING  | found no stored workdir sizes
[2025-05-29 05:19:50] 2025-05-29 12:19:35,989 | INFO     | will not add max space = 0 B to job metrics
[2025-05-29 05:19:50] 2025-05-29 12:19:35,989 | WARNING  | wrong length of table data, x=[1748521040.0], y=[1287.0] (must be same and length>=4)
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | ..............................
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . Timing measurements:
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . get job = 0 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . initial setup = 2 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . payload setup = 4 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . stage-in = 0 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . payload execution = 15 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . stage-out = 0 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | . log creation = 0 s
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | ..............................
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-29 05:19:50] 2025-05-29 12:19:35,990 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669624193/pilotlog.txt
[2025-05-29 05:19:50] [end log extracts]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,002 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-29 05:19:50] 2025-05-29 12:19:36,003 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-29 05:19:50] 2025-05-29 12:19:36,349 | INFO     | 
[2025-05-29 05:19:50] 2025-05-29 12:19:36,349 | INFO     | job summary report
[2025-05-29 05:19:50] 2025-05-29 12:19:36,349 | INFO     | --------------------------------------------------
[2025-05-29 05:19:50] 2025-05-29 12:19:36,349 | INFO     | PanDA job id: 6669624193
[2025-05-29 05:19:50] 2025-05-29 12:19:36,349 | INFO     | task id: 44871837
[2025-05-29 05:19:50] 2025-05-29 12:19:36,349 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-29 05:17:28,344 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-29 05:19:50] 2025-05-29 12:19:36,349 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 05:19:50] 2025-05-29 12:19:36,349 | INFO     | pilot state: failed 
[2025-05-29 05:19:50] 2025-05-29 12:19:36,350 | INFO     | transexitcode: 65
[2025-05-29 05:19:50] 2025-05-29 12:19:36,350 | INFO     | exeerrorcode: 65
[2025-05-29 05:19:50] 2025-05-29 12:19:36,350 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-29 05:19:50] 2025-05-29 12:19:36,350 | INFO     | exitcode: 65
[2025-05-29 05:19:50] 2025-05-29 12:19:36,350 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-29 05:19:50] 2025-05-29 12:19:36,350 | INFO     | cpuconsumptiontime: 16 s
[2025-05-29 05:19:50] 2025-05-29 12:19:36,350 | INFO     | nevents: 0
[2025-05-29 05:19:50] 2025-05-29 12:19:36,350 | INFO     | neventsw: 0
[2025-05-29 05:19:50] 2025-05-29 12:19:36,350 | INFO     | pid: 3031419
[2025-05-29 05:19:50] 2025-05-29 12:19:36,350 | INFO     | pgrp: 3031419
[2025-05-29 05:19:50] 2025-05-29 12:19:36,350 | INFO     | corecount: 12
[2025-05-29 05:19:50] 2025-05-29 12:19:36,350 | INFO     | event service: False
[2025-05-29 05:19:50] 2025-05-29 12:19:36,350 | INFO     | sizes: {0: 2405229, 3: 2405435, 10: 2405463, 23: 2428683, 24: 2432918, 25: 2432946, 144: 2433216}
[2025-05-29 05:19:50] 2025-05-29 12:19:36,350 | INFO     | --------------------------------------------------
[2025-05-29 05:19:50] 2025-05-29 12:19:36,350 | INFO     | 
[2025-05-29 05:19:50] 2025-05-29 12:19:36,350 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-29 05:19:50] 2025-05-29 12:19:36,366 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,366 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,366 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,366 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,366 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,366 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,366 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,366 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,366 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,367 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,367 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,367 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,367 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,367 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,367 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,367 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,367 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,367 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 05:19:50] 2025-05-29 12:19:36,367 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,367 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 05:19:50] 2025-05-29 12:19:36,367 | INFO     | job 6669624193 has completed (purged errors)
[2025-05-29 05:19:50] 2025-05-29 12:19:36,367 | INFO     | overall cleanup function is called
[2025-05-29 05:19:50] 2025-05-29 12:19:37,373 | INFO     | --- collectZombieJob: --- 10, [3031419]
[2025-05-29 05:19:50] 2025-05-29 12:19:37,373 | INFO     | zombie collector waiting for pid 3031419
[2025-05-29 05:19:50] 2025-05-29 12:19:37,373 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 05:19:50] 2025-05-29 12:19:37,373 | INFO     | collected zombie processes
[2025-05-29 05:19:50] 2025-05-29 12:19:37,373 | INFO     | will attempt to kill all subprocesses of pid=3031419
[2025-05-29 05:19:50] 2025-05-29 12:19:37,534 | INFO     | process IDs to be killed: [3031419] (in reverse order)
[2025-05-29 05:19:50] 2025-05-29 12:19:37,595 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 05:19:50] 2025-05-29 12:19:37,595 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 05:19:50] 2025-05-29 12:19:37,603 | INFO     | did not find any defunct processes belonging to 3031419
[2025-05-29 05:19:50] 2025-05-29 12:19:37,610 | INFO     | did not find any defunct processes belonging to 3031419
[2025-05-29 05:19:50] 2025-05-29 12:19:37,610 | INFO     | ready for new job
[2025-05-29 05:19:50] 2025-05-29 12:19:37,610 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 05:19:50] 2025-05-29 12:19:37,612 | INFO     | **************************************
[2025-05-29 05:19:50] 2025-05-29 12:19:37,612 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 05:19:50] 2025-05-29 12:19:37,612 | INFO     | **************************************
[2025-05-29 05:19:50] 2025-05-29 12:19:37,612 | INFO     | 
[2025-05-29 05:19:50] 2025-05-29 12:19:37,614 | INFO     | architecture information:
[2025-05-29 05:19:50] 2025-05-29 12:19:37,614 | INFO     | executing command: cat /etc/os-release
[2025-05-29 05:19:50] 2025-05-29 12:19:37,625 | INFO     | cat /etc/os-release:
[2025-05-29 05:19:50] NAME="CentOS Linux"
[2025-05-29 05:19:50] VERSION="7 (Core)"
[2025-05-29 05:19:50] ID="centos"
[2025-05-29 05:19:50] ID_LIKE="rhel fedora"
[2025-05-29 05:19:50] VERSION_ID="7"
[2025-05-29 05:19:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 05:19:50] ANSI_COLOR="0;31"
[2025-05-29 05:19:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 05:19:50] HOME_URL="https://www.centos.org/"
[2025-05-29 05:19:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 05:19:50] 
[2025-05-29 05:19:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 05:19:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 05:19:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 05:19:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 05:19:50] 
[2025-05-29 05:19:50] 2025-05-29 12:19:37,625 | INFO     | **************************************
[2025-05-29 05:19:50] 2025-05-29 12:19:38,128 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-29 05:19:50] 2025-05-29 12:19:38,141 | INFO     | sufficient remaining disk space (1808134045696 B)
[2025-05-29 05:19:50] 2025-05-29 12:19:38,142 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 05:19:50] 2025-05-29 12:19:38,142 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 05:19:50] 2025-05-29 12:19:38,142 | INFO     | update_server=False
[2025-05-29 05:19:50] 2025-05-29 12:19:38,142 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 05:19:50] 2025-05-29 12:19:38,162 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-29 05:19:50] 2025-05-29 12:19:38,162 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-29 05:19:50] 2025-05-29 12:19:38,163 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 05:19:50] 2025-05-29 12:19:38,163 | INFO     | will abort loop
[2025-05-29 05:19:50] 2025-05-29 12:19:38,453 | INFO     | all job control threads have been joined
[2025-05-29 05:19:50] 2025-05-29 12:19:38,782 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 05:19:50] 2025-05-29 12:19:38,782 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 05:19:50] 2025-05-29 12:19:38,782 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 05:19:50] 2025-05-29 12:19:38,814 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 05:19:50] 2025-05-29 12:19:39,076 | INFO     | all payload control threads have been joined
[2025-05-29 05:19:50] 2025-05-29 12:19:39,147 | INFO     | [job] retrieve thread has finished
[2025-05-29 05:19:50] 2025-05-29 12:19:39,168 | INFO     | [job] job monitor thread has finished
[2025-05-29 05:19:50] 2025-05-29 12:19:39,169 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 05:19:50] 2025-05-29 12:19:39,172 | INFO     | [data] copytool_in thread has finished
[2025-05-29 05:19:50] 2025-05-29 12:19:39,176 | INFO     | all data control threads have been joined
[2025-05-29 05:19:50] 2025-05-29 12:19:39,271 | INFO     | [payload] validate_post thread has finished
[2025-05-29 05:19:50] 2025-05-29 12:19:39,415 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 05:19:50] 2025-05-29 12:19:39,458 | INFO     | [job] control thread has finished
[2025-05-29 05:19:50] 2025-05-29 12:19:39,651 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 05:19:50] 2025-05-29 12:19:39,748 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 05:19:50] 2025-05-29 12:19:39,825 | INFO     | [payload] failed_post thread has finished
[2025-05-29 05:19:50] 2025-05-29 12:19:40,078 | INFO     | [payload] control thread has finished
[2025-05-29 05:19:50] 2025-05-29 12:19:40,181 | INFO     | [data] control thread has finished
[2025-05-29 05:19:50] 2025-05-29 12:19:40,414 | INFO     | [job] validate thread has finished
[2025-05-29 05:19:50] 2025-05-29 12:19:40,556 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 05:19:50] 2025-05-29 12:19:40,819 | INFO     | [data] copytool_out thread has finished
[2025-05-29 05:19:50] 2025-05-29 12:19:41,077 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 05:19:50] 2025-05-29 12:19:42,082 | INFO     | [job] queue monitor thread has finished
[2025-05-29 05:19:50] 2025-05-29 12:19:43,656 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 05:19:50] 2025-05-29 12:19:45,025 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140022820763456)>', '<ExcThread(monitor, started 140022267225856)>']
[2025-05-29 05:19:50] 2025-05-29 12:19:45,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 05:19:50] 2025-05-29 12:19:45,809 | INFO     | [monitor] control thread has ended
[2025-05-29 05:19:50] 2025-05-29 12:19:50,041 | INFO     | all workflow threads have been joined
[2025-05-29 05:19:50] 2025-05-29 12:19:50,041 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 05:19:50] 2025-05-29 12:19:50,041 | INFO     | traces error code: 0
[2025-05-29 05:19:50] 2025-05-29 12:19:50,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 05:19:50] 2025-05-29 12:19:50,184 [wrapper] ==== pilot stdout END ====
[2025-05-29 05:19:50] 2025-05-29 12:19:50,186 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 05:19:50] 2025-05-29 12:19:50,188 [wrapper] pilotpid: 3023212
[2025-05-29 05:19:50] 2025-05-29 12:19:50,190 [wrapper] Pilot exit status: 0
[2025-05-29 05:19:50] 2025-05-29 12:19:50,197 [wrapper] pandaids: 6669624193
[2025-05-29 05:19:50] 2025-05-29 12:19:50,237 [wrapper] cleanup supervisor_pilot 3023218 3023213
[2025-05-29 05:19:50] 2025-05-29 12:19:50,239 [wrapper] Test setup, not cleaning
[2025-05-29 05:19:50] 2025-05-29 12:19:50,241 [wrapper] apfmon messages muted
[2025-05-29 05:19:50] 2025-05-29 12:19:50,243 [wrapper] ==== wrapper stdout END ====
[2025-05-29 05:19:50] 2025-05-29 12:19:50,244 [wrapper] ==== wrapper stderr END ====
[2025-05-29 05:19:50]  *** Error codes and diagnostics ***
[2025-05-29 05:19:50]     "exeErrorCode": 65,
[2025-05-29 05:19:50]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-29 05:19:50]     "pilotErrorCode": 1305,
[2025-05-29 05:19:50]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-29 05:19:50]  *** Listing of results directory ***
[2025-05-29 05:19:50] total 222536
[2025-05-29 05:19:50] -rw-r--r--. 1 boinc boinc    495897 May 29 02:08 pilot3.tar.gz
[2025-05-29 05:19:50] -rwx------. 1 boinc boinc     37140 May 29 02:14 runpilot2-wrapper.sh
[2025-05-29 05:19:50] -rw-r--r--. 1 boinc boinc      5111 May 29 02:14 queuedata.json
[2025-05-29 05:19:50] -rw-r--r--. 1 boinc boinc       100 May 29 05:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 05:19:50] -rwxr-xr-x. 1 boinc boinc      7986 May 29 05:16 run_atlas
[2025-05-29 05:19:50] -rw-r--r--. 1 boinc boinc       105 May 29 05:16 job.xml
[2025-05-29 05:19:50] -rw-r--r--. 2 boinc boinc 223843256 May 29 05:16 EVNT.44871834._003727.pool.root.1
[2025-05-29 05:19:50] -rw-r--r--. 2 boinc boinc     15093 May 29 05:16 start_atlas.sh
[2025-05-29 05:19:50] drwxrwx--x. 2 boinc boinc      4096 May 29 05:16 shared
[2025-05-29 05:19:50] -rw-r--r--. 2 boinc boinc    508877 May 29 05:16 input.tar.gz
[2025-05-29 05:19:50] -rw-r--r--. 1 boinc boinc      6601 May 29 05:16 init_data.xml
[2025-05-29 05:19:50] -rw-r--r--. 1 boinc boinc         0 May 29 05:16 boinc_lockfile
[2025-05-29 05:19:50] -rw-r--r--. 1 boinc boinc      2558 May 29 05:16 pandaJob.out
[2025-05-29 05:19:50] -rw-------. 1 boinc boinc    992820 May 29 05:16 agis_schedconf.cvmfs.json
[2025-05-29 05:19:50] -rw-------. 1 boinc boinc   1603667 May 29 05:16 agis_ddmendpoints.agis.ALL.json
[2025-05-29 05:19:50] drwx------. 4 boinc boinc      4096 May 29 05:16 pilot3
[2025-05-29 05:19:50] -rw-r--r--. 1 boinc boinc       521 May 29 05:17 boinc_task_state.xml
[2025-05-29 05:19:50] -rw-------. 1 boinc boinc       977 May 29 05:17 memory_monitor_summary.json
[2025-05-29 05:19:50] -rw-------. 1 boinc boinc     20683 May 29 05:17 log.44871837._098029.job.log.tgz.1
[2025-05-29 05:19:50] -rw-------. 1 boinc boinc        95 May 29 05:18 pilot_heartbeat.json
[2025-05-29 05:19:50] -rw-------. 1 boinc boinc      8353 May 29 05:19 heartbeat.json
[2025-05-29 05:19:50] -rw-r--r--. 1 boinc boinc      8192 May 29 05:19 boinc_mmap_file
[2025-05-29 05:19:50] -rw-r--r--. 1 boinc boinc        22 May 29 05:19 wrapper_checkpoint.txt
[2025-05-29 05:19:50] -rw-------. 1 boinc boinc      4538 May 29 05:19 pilotlog.txt
[2025-05-29 05:19:50] -rw-------. 1 boinc boinc     73086 May 29 05:19 log.44871837._098029.job.log.1
[2025-05-29 05:19:50] -rw-------. 1 boinc boinc       188 May 29 05:19 output.list
[2025-05-29 05:19:50] -rw-r--r--. 1 boinc boinc       620 May 29 05:19 runtime_log
[2025-05-29 05:19:50] -rw-------. 1 boinc boinc    112640 May 29 05:19 result.tar.gz
[2025-05-29 05:19:50] -rw-r--r--. 1 boinc boinc      8484 May 29 05:19 runtime_log.err
[2025-05-29 05:19:50] -rw-------. 1 boinc boinc       646 May 29 05:19 NrDODmLWoe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZyUKDmE1YMpm.diag
[2025-05-29 05:19:50] -rw-r--r--. 1 boinc boinc     21462 May 29 05:19 stderr.txt
[2025-05-29 05:19:50] No HITS result produced
[2025-05-29 05:19:50]  *** Contents of shared directory: ***
[2025-05-29 05:19:50] total 219232
[2025-05-29 05:19:50] -rw-r--r--. 2 boinc boinc 223843256 May 29 05:16 ATLAS.root_0
[2025-05-29 05:19:50] -rw-r--r--. 2 boinc boinc     15093 May 29 05:16 start_atlas.sh
[2025-05-29 05:19:50] -rw-r--r--. 2 boinc boinc    508877 May 29 05:16 input.tar.gz
[2025-05-29 05:19:50] -rw-------. 1 boinc boinc    112640 May 29 05:19 result.tar.gz
05:19:51 (3019622): run_atlas exited; CPU time 19.324590
05:19:51 (3019622): called boinc_finish(0)

</stderr_txt>
]]>

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