Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:48:18 (3018156): wrapper (7.7.26015): starting
04:48:18 (3018156): wrapper: running run_atlas (--nthreads 12)
[2025-05-29 04:48:18] Arguments: --nthreads 12
[2025-05-29 04:48:18] Threads: 12
[2025-05-29 04:48:18] Checking for CVMFS
[2025-05-29 04:48:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 04:48:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 04:48:18] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 04:48:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 04:48:19] 2.11.5.0 3156379 24424 225164 146560 1 140 41414879 45568000 11433 130560 0 268613904 99.814 154291478 23824 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-29 04:48:19] CVMFS is ok
[2025-05-29 04:48:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-29 04:48:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-29 04:48:19] Further information can be found at the LHC@home message board.
[2025-05-29 04:48:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 04:48:19] Checking for apptainer binary...
[2025-05-29 04:48:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 04:48:19] Running /usr/bin/apptainer --version
[2025-05-29 04:48:19] apptainer version 1.4.0-1.el9
[2025-05-29 04:48:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 04:48:19] wns0094.triumf.lcg
[2025-05-29 04:48:19] apptainer works
[2025-05-29 04:48:19] Set ATHENA_PROC_NUMBER=12
[2025-05-29 04:48:19] Set ATHENA_CORE_NUMBER=12
[2025-05-29 04:48:19] Starting ATLAS job with PandaID=6669623655
[2025-05-29 04:48:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 04:52:03]  *** The last 200 lines of the pilot log: ***
[2025-05-29 04:52:03] 2025-05-29 11:51:46,022 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 04:52:03] 2025-05-29 11:51:46,022 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 04:52:03] 2025-05-29 11:51:46,023 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 04:52:03] 2025-05-29 11:51:46,023 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 04:52:03] 2025-05-29 11:51:46,023 | WARNING  | found no stored workdir sizes
[2025-05-29 04:52:03] 2025-05-29 11:51:46,023 | INFO     | will not add max space = 0 B to job metrics
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | WARNING  | wrong length of table data, x=[1748519350.0], y=[2079.0] (must be same and length>=4)
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | ..............................
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . Timing measurements:
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . get job = 0 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . initial setup = 3 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . payload setup = 10 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . stage-in = 0 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . payload execution = 28 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . stage-out = 0 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . log creation = 0 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | ..............................
[2025-05-29 04:52:03] 2025-05-29 11:51:46,068 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-29 04:52:03] 2025-05-29 11:51:46,068 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669623655/pilotlog.txt
[2025-05-29 04:52:03] 2025-05-29 11:51:46,082 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-29 04:52:03] - Log from pilotlog.txt -
[2025-05-29 04:52:03] 2025-05-29 11:51:46,022 | INFO     | extracted standard info from prmon json
[2025-05-29 04:52:03] 2025-05-29 11:51:46,022 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 04:52:03] 2025-05-29 11:51:46,022 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 04:52:03] 2025-05-29 11:51:46,023 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 04:52:03] 2025-05-29 11:51:46,023 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 04:52:03] 2025-05-29 11:51:46,023 | WARNING  | found no stored workdir sizes
[2025-05-29 04:52:03] 2025-05-29 11:51:46,023 | INFO     | will not add max space = 0 B to job metrics
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | WARNING  | wrong length of table data, x=[1748519350.0], y=[2079.0] (must be same and length>=4)
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | ..............................
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . Timing measurements:
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . get job = 0 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . initial setup = 3 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . payload setup = 10 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . stage-in = 0 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . payload execution = 28 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . stage-out = 0 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . log creation = 0 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | ..............................
[2025-05-29 04:52:03] 2025-05-29 11:51:46,068 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-29 04:52:03] 2025-05-29 11:51:46,068 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669623655/pilotlog.txt
[2025-05-29 04:52:03] 2025-05-29 11:51:46,082 | WARNING  | 
[2025-05-29 04:52:03] [begin log extracts]
[2025-05-29 04:52:03] - Log from pilotlog.txt -
[2025-05-29 04:52:03] 2025-05-29 11:51:46,022 | INFO     | extracted standard info from prmon json
[2025-05-29 04:52:03] 2025-05-29 11:51:46,022 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 04:52:03] 2025-05-29 11:51:46,022 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 04:52:03] 2025-05-29 11:51:46,023 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 04:52:03] 2025-05-29 11:51:46,023 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 04:52:03] 2025-05-29 11:51:46,023 | WARNING  | found no stored workdir sizes
[2025-05-29 04:52:03] 2025-05-29 11:51:46,023 | INFO     | will not add max space = 0 B to job metrics
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | WARNING  | wrong length of table data, x=[1748519350.0], y=[2079.0] (must be same and length>=4)
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | ..............................
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . Timing measurements:
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . get job = 0 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . initial setup = 3 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . payload setup = 10 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . stage-in = 0 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . payload execution = 28 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . stage-out = 0 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | . log creation = 0 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,024 | INFO     | ..............................
[2025-05-29 04:52:03] 2025-05-29 11:51:46,068 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-29 04:52:03] 2025-05-29 11:51:46,068 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669623655/pilotlog.txt
[2025-05-29 04:52:03] [end log extracts]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,082 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-29 04:52:03] 2025-05-29 11:51:46,084 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-29 04:52:03] 2025-05-29 11:51:46,881 | INFO     | 
[2025-05-29 04:52:03] 2025-05-29 11:51:46,881 | INFO     | job summary report
[2025-05-29 04:52:03] 2025-05-29 11:51:46,881 | INFO     | --------------------------------------------------
[2025-05-29 04:52:03] 2025-05-29 11:51:46,881 | INFO     | PanDA job id: 6669623655
[2025-05-29 04:52:03] 2025-05-29 11:51:46,881 | INFO     | task id: 44871837
[2025-05-29 04:52:03] 2025-05-29 11:51:46,881 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-29 04:49:26,875 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-29 04:52:03] 2025-05-29 11:51:46,881 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 04:52:03] 2025-05-29 11:51:46,881 | INFO     | pilot state: failed 
[2025-05-29 04:52:03] 2025-05-29 11:51:46,882 | INFO     | transexitcode: 65
[2025-05-29 04:52:03] 2025-05-29 11:51:46,882 | INFO     | exeerrorcode: 65
[2025-05-29 04:52:03] 2025-05-29 11:51:46,882 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-29 04:52:03] 2025-05-29 11:51:46,882 | INFO     | exitcode: 65
[2025-05-29 04:52:03] 2025-05-29 11:51:46,882 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-29 04:52:03] 2025-05-29 11:51:46,882 | INFO     | cpuconsumptiontime: 18 s
[2025-05-29 04:52:03] 2025-05-29 11:51:46,882 | INFO     | nevents: 0
[2025-05-29 04:52:03] 2025-05-29 11:51:46,882 | INFO     | neventsw: 0
[2025-05-29 04:52:03] 2025-05-29 11:51:46,882 | INFO     | pid: 3036093
[2025-05-29 04:52:03] 2025-05-29 11:51:46,882 | INFO     | pgrp: 3036093
[2025-05-29 04:52:03] 2025-05-29 11:51:46,882 | INFO     | corecount: 12
[2025-05-29 04:52:03] 2025-05-29 11:51:46,882 | INFO     | event service: False
[2025-05-29 04:52:03] 2025-05-29 11:51:46,882 | INFO     | sizes: {0: 2405003, 1: 2405202, 8: 2405408, 11: 2405436, 43: 2428618, 44: 2432853, 47: 2433009, 174: 2433179}
[2025-05-29 04:52:03] 2025-05-29 11:51:46,882 | INFO     | --------------------------------------------------
[2025-05-29 04:52:03] 2025-05-29 11:51:46,882 | INFO     | 
[2025-05-29 04:52:03] 2025-05-29 11:51:46,882 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-29 04:52:03] 2025-05-29 11:51:46,901 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,901 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,901 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,901 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,902 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,902 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,902 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,902 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,902 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,902 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,902 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,902 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,902 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,903 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,903 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 04:52:03] 2025-05-29 11:51:46,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,903 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 04:52:03] 2025-05-29 11:51:46,903 | INFO     | job 6669623655 has completed (purged errors)
[2025-05-29 04:52:03] 2025-05-29 11:51:46,903 | INFO     | overall cleanup function is called
[2025-05-29 04:52:03] 2025-05-29 11:51:47,925 | INFO     | --- collectZombieJob: --- 10, [3036093]
[2025-05-29 04:52:03] 2025-05-29 11:51:47,925 | INFO     | zombie collector waiting for pid 3036093
[2025-05-29 04:52:03] 2025-05-29 11:51:47,925 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 04:52:03] 2025-05-29 11:51:47,925 | INFO     | collected zombie processes
[2025-05-29 04:52:03] 2025-05-29 11:51:47,925 | INFO     | will attempt to kill all subprocesses of pid=3036093
[2025-05-29 04:52:03] 2025-05-29 11:51:48,218 | INFO     | process IDs to be killed: [3036093] (in reverse order)
[2025-05-29 04:52:03] 2025-05-29 11:51:48,284 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 04:52:03] 2025-05-29 11:51:48,285 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 04:52:03] 2025-05-29 11:51:48,306 | INFO     | did not find any defunct processes belonging to 3036093
[2025-05-29 04:52:03] 2025-05-29 11:51:48,317 | INFO     | did not find any defunct processes belonging to 3036093
[2025-05-29 04:52:03] 2025-05-29 11:51:48,317 | INFO     | ready for new job
[2025-05-29 04:52:03] 2025-05-29 11:51:48,330 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 04:52:03] 2025-05-29 11:51:48,332 | INFO     | **************************************
[2025-05-29 04:52:03] 2025-05-29 11:51:48,332 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 04:52:03] 2025-05-29 11:51:48,332 | INFO     | **************************************
[2025-05-29 04:52:03] 2025-05-29 11:51:48,332 | INFO     | 
[2025-05-29 04:52:03] 2025-05-29 11:51:48,334 | INFO     | architecture information:
[2025-05-29 04:52:03] 2025-05-29 11:51:48,334 | INFO     | executing command: cat /etc/os-release
[2025-05-29 04:52:03] 2025-05-29 11:51:48,351 | INFO     | cat /etc/os-release:
[2025-05-29 04:52:03] NAME="CentOS Linux"
[2025-05-29 04:52:03] VERSION="7 (Core)"
[2025-05-29 04:52:03] ID="centos"
[2025-05-29 04:52:03] ID_LIKE="rhel fedora"
[2025-05-29 04:52:03] VERSION_ID="7"
[2025-05-29 04:52:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 04:52:03] ANSI_COLOR="0;31"
[2025-05-29 04:52:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 04:52:03] HOME_URL="https://www.centos.org/"
[2025-05-29 04:52:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 04:52:03] 
[2025-05-29 04:52:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 04:52:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 04:52:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 04:52:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 04:52:03] 
[2025-05-29 04:52:03] 2025-05-29 11:51:48,351 | INFO     | **************************************
[2025-05-29 04:52:03] 2025-05-29 11:51:48,855 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-29 04:52:03] 2025-05-29 11:51:48,894 | INFO     | sufficient remaining disk space (1931263082496 B)
[2025-05-29 04:52:03] 2025-05-29 11:51:48,894 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 04:52:03] 2025-05-29 11:51:48,895 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 04:52:03] 2025-05-29 11:51:48,895 | INFO     | update_server=False
[2025-05-29 04:52:03] 2025-05-29 11:51:48,895 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 04:52:03] 2025-05-29 11:51:48,895 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-29 04:52:03] 2025-05-29 11:51:48,895 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 04:52:03] 2025-05-29 11:51:48,896 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 04:52:03] 2025-05-29 11:51:48,896 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 04:52:03] 2025-05-29 11:51:49,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 04:52:03] 2025-05-29 11:51:49,062 | INFO     | aborting loop
[2025-05-29 04:52:03] 2025-05-29 11:51:49,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 04:52:03] 2025-05-29 11:51:49,853 | INFO     | all data control threads have been joined
[2025-05-29 04:52:03] 2025-05-29 11:51:49,901 | INFO     | [job] retrieve thread has finished
[2025-05-29 04:52:03] 2025-05-29 11:51:50,068 | INFO     | [job] job monitor thread has finished
[2025-05-29 04:52:03] 2025-05-29 11:51:50,122 | INFO     | all payload control threads have been joined
[2025-05-29 04:52:03] 2025-05-29 11:51:50,428 | INFO     | all job control threads have been joined
[2025-05-29 04:52:03] 2025-05-29 11:51:50,599 | INFO     | [payload] failed_post thread has finished
[2025-05-29 04:52:03] 2025-05-29 11:51:50,822 | INFO     | [payload] validate_post thread has finished
[2025-05-29 04:52:03] 2025-05-29 11:51:50,859 | INFO     | [data] control thread has finished
[2025-05-29 04:52:03] 2025-05-29 11:51:50,961 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 04:52:03] 2025-05-29 11:51:51,028 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 04:52:03] 2025-05-29 11:51:51,083 | INFO     | [job] validate thread has finished
[2025-05-29 04:52:03] 2025-05-29 11:51:51,129 | INFO     | [payload] control thread has finished
[2025-05-29 04:52:03] 2025-05-29 11:51:51,183 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 04:52:03] 2025-05-29 11:51:51,183 | INFO     | [data] copytool_in thread has finished
[2025-05-29 04:52:03] 2025-05-29 11:51:51,339 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 04:52:03] 2025-05-29 11:51:51,434 | INFO     | [job] control thread has finished
[2025-05-29 04:52:03] 2025-05-29 11:51:51,451 | INFO     | [data] copytool_out thread has finished
[2025-05-29 04:52:03] 2025-05-29 11:51:51,569 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 04:52:03] 2025-05-29 11:51:51,670 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 04:52:03] 2025-05-29 11:51:52,575 | INFO     | [job] queue monitor thread has finished
[2025-05-29 04:52:03] 2025-05-29 11:51:55,679 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 04:52:03] 2025-05-29 11:51:57,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140370824185664)>', '<ExcThread(monitor, started 140370033751808)>']
[2025-05-29 04:52:03] 2025-05-29 11:51:57,953 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 04:52:03] 2025-05-29 11:51:57,953 | INFO     | [monitor] control thread has ended
[2025-05-29 04:52:03] 2025-05-29 11:52:02,732 | INFO     | all workflow threads have been joined
[2025-05-29 04:52:03] 2025-05-29 11:52:02,732 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 04:52:03] 2025-05-29 11:52:02,732 | INFO     | traces error code: 0
[2025-05-29 04:52:03] 2025-05-29 11:52:02,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 04:52:03] 2025-05-29 11:52:02,931 [wrapper] ==== pilot stdout END ====
[2025-05-29 04:52:03] 2025-05-29 11:52:02,970 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 04:52:03] 2025-05-29 11:52:02,987 [wrapper] pilotpid: 3021714
[2025-05-29 04:52:03] 2025-05-29 11:52:03,026 [wrapper] Pilot exit status: 0
[2025-05-29 04:52:03] 2025-05-29 11:52:03,226 [wrapper] pandaids: 6669623655
[2025-05-29 04:52:03] 2025-05-29 11:52:03,327 [wrapper] cleanup supervisor_pilot 3021720 3021715
[2025-05-29 04:52:03] 2025-05-29 11:52:03,329 [wrapper] Test setup, not cleaning
[2025-05-29 04:52:03] 2025-05-29 11:52:03,332 [wrapper] apfmon messages muted
[2025-05-29 04:52:03] 2025-05-29 11:52:03,334 [wrapper] ==== wrapper stdout END ====
[2025-05-29 04:52:03] 2025-05-29 11:52:03,336 [wrapper] ==== wrapper stderr END ====
[2025-05-29 04:52:03]  *** Error codes and diagnostics ***
[2025-05-29 04:52:03]     "exeErrorCode": 65,
[2025-05-29 04:52:03]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-29 04:52:03]     "pilotErrorCode": 1305,
[2025-05-29 04:52:03]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-29 04:52:03]  *** Listing of results directory ***
[2025-05-29 04:52:03] total 224308
[2025-05-29 04:52:03] -rw-r--r--. 1 boinc boinc    495897 May 29 01:50 pilot3.tar.gz
[2025-05-29 04:52:03] -rwx------. 1 boinc boinc     37140 May 29 01:52 runpilot2-wrapper.sh
[2025-05-29 04:52:03] -rw-r--r--. 1 boinc boinc      5111 May 29 01:52 queuedata.json
[2025-05-29 04:52:03] -rw-r--r--. 1 boinc boinc       100 May 29 04:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 04:52:03] -rwxr-xr-x. 1 boinc boinc      7986 May 29 04:48 run_atlas
[2025-05-29 04:52:03] -rw-r--r--. 1 boinc boinc       105 May 29 04:48 job.xml
[2025-05-29 04:52:03] -rw-r--r--. 2 boinc boinc 225659469 May 29 04:48 EVNT.44871834._003721.pool.root.1
[2025-05-29 04:52:03] -rw-r--r--. 1 boinc boinc      6602 May 29 04:48 init_data.xml
[2025-05-29 04:52:03] -rw-r--r--. 2 boinc boinc     15093 May 29 04:48 start_atlas.sh
[2025-05-29 04:52:03] drwxrwx--x. 2 boinc boinc      4096 May 29 04:48 shared
[2025-05-29 04:52:03] -rw-r--r--. 2 boinc boinc    508871 May 29 04:48 input.tar.gz
[2025-05-29 04:52:03] -rw-r--r--. 1 boinc boinc         0 May 29 04:48 boinc_lockfile
[2025-05-29 04:52:03] -rw-r--r--. 1 boinc boinc      2555 May 29 04:48 pandaJob.out
[2025-05-29 04:52:03] -rw-------. 1 boinc boinc    993012 May 29 04:48 agis_schedconf.cvmfs.json
[2025-05-29 04:52:03] -rw-------. 1 boinc boinc   1603667 May 29 04:48 agis_ddmendpoints.agis.ALL.json
[2025-05-29 04:52:03] drwx------. 4 boinc boinc      4096 May 29 04:48 pilot3
[2025-05-29 04:52:03] -rw-r--r--. 1 boinc boinc       522 May 29 04:49 boinc_task_state.xml
[2025-05-29 04:52:03] -rw-------. 1 boinc boinc       980 May 29 04:49 memory_monitor_summary.json
[2025-05-29 04:52:03] -rw-------. 1 boinc boinc     20130 May 29 04:49 log.44871837._097877.job.log.tgz.1
[2025-05-29 04:52:03] -rw-------. 1 boinc boinc        95 May 29 04:51 pilot_heartbeat.json
[2025-05-29 04:52:03] -rw-------. 1 boinc boinc      8310 May 29 04:51 heartbeat.json
[2025-05-29 04:52:03] -rw-r--r--. 1 boinc boinc      8192 May 29 04:52 boinc_mmap_file
[2025-05-29 04:52:03] -rw-r--r--. 1 boinc boinc        22 May 29 04:52 wrapper_checkpoint.txt
[2025-05-29 04:52:03] -rw-------. 1 boinc boinc      4475 May 29 04:52 pilotlog.txt
[2025-05-29 04:52:03] -rw-------. 1 boinc boinc     74767 May 29 04:52 log.44871837._097877.job.log.1
[2025-05-29 04:52:03] -rw-------. 1 boinc boinc       188 May 29 04:52 output.list
[2025-05-29 04:52:03] -rw-r--r--. 1 boinc boinc       620 May 29 04:52 runtime_log
[2025-05-29 04:52:03] -rw-------. 1 boinc boinc    112640 May 29 04:52 result.tar.gz
[2025-05-29 04:52:03] -rw-------. 1 boinc boinc       647 May 29 04:52 sogNDmZBoe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8CeKDmCMS0Zn.diag
[2025-05-29 04:52:03] -rw-r--r--. 1 boinc boinc      8484 May 29 04:52 runtime_log.err
[2025-05-29 04:52:03] -rw-r--r--. 1 boinc boinc     21500 May 29 04:52 stderr.txt
[2025-05-29 04:52:03] No HITS result produced
[2025-05-29 04:52:03]  *** Contents of shared directory: ***
[2025-05-29 04:52:03] total 221004
[2025-05-29 04:52:03] -rw-r--r--. 2 boinc boinc 225659469 May 29 04:48 ATLAS.root_0
[2025-05-29 04:52:03] -rw-r--r--. 2 boinc boinc     15093 May 29 04:48 start_atlas.sh
[2025-05-29 04:52:03] -rw-r--r--. 2 boinc boinc    508871 May 29 04:48 input.tar.gz
[2025-05-29 04:52:03] -rw-------. 1 boinc boinc    112640 May 29 04:52 result.tar.gz
04:52:05 (3018156): run_atlas exited; CPU time 23.581892
04:52:05 (3018156): called boinc_finish(0)

</stderr_txt>
]]>

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