Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:27:07 (3006735): wrapper (7.7.26015): starting
01:27:07 (3006735): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 01:27:07] Arguments: --nthreads 4
[2025-06-04 01:27:07] Threads: 4
[2025-06-04 01:27:07] Checking for CVMFS
[2025-06-04 01:27:07] No cvmfs_config command found, will try listing directly
[2025-06-04 01:27:07] CVMFS is ok
[2025-06-04 01:27:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 01:27:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 01:27:07] Further information can be found at the LHC@home message board.
[2025-06-04 01:27:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:27:07] Checking for apptainer binary...
[2025-06-04 01:27:07] which: no apptainer in ((null))
[2025-06-04 01:27:07] apptainer is not installed, using version from CVMFS
[2025-06-04 01:27:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:27:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-06-04 01:27:07] apptainer works
[2025-06-04 01:27:07] Set ATHENA_PROC_NUMBER=4
[2025-06-04 01:27:07] Set ATHENA_CORE_NUMBER=4
[2025-06-04 01:27:07] Starting ATLAS job with PandaID=6669239100
[2025-06-04 01:27:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:28:54]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:28:54] 2025-06-04 03:27:33,007 | INFO     | total number of processed events: 400 (read)
[2025-06-04 05:28:54] 2025-06-04 03:27:33,011 | INFO     | executing command: lscpu
[2025-06-04 05:28:54] 2025-06-04 03:27:33,074 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 05:28:54] 2025-06-04 03:27:33,920 | INFO     | monitor loop #1044: job 0:6669239100 is in state 'finished'
[2025-06-04 05:28:54] 2025-06-04 03:27:33,920 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:28:54] 2025-06-04 03:27:36,423 | INFO     | monitor loop #1045: job 0:6669239100 is in state 'finished'
[2025-06-04 05:28:54] 2025-06-04 03:27:36,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:28:54] 2025-06-04 03:27:38,014 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 05:28:54] 2025-06-04 03:27:38,014 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6669239100/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:28:54] 2025-06-04 03:27:38,015 | INFO     | extracted standard info from prmon json
[2025-06-04 05:28:54] 2025-06-04 03:27:38,015 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:28:54] 2025-06-04 03:27:38,015 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:28:54] 2025-06-04 03:27:38,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:28:54] 2025-06-04 03:27:38,016 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:28:54] 2025-06-04 03:27:38,021 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:28:54] 2025-06-04 03:27:38,022 | INFO     | sum of square deviations: 4075741535.0
[2025-06-04 05:28:54] 2025-06-04 03:27:38,023 | INFO     | sum of deviations: 18967400450.999992
[2025-06-04 05:28:54] 2025-06-04 03:27:38,024 | INFO     | mean x: 1749000433.5
[2025-06-04 05:28:54] 2025-06-04 03:27:38,024 | INFO     | mean y: 2333033.7627118644
[2025-06-04 05:28:54] 2025-06-04 03:27:38,024 | INFO     | -- intersect: -8137042666.656202
[2025-06-04 05:28:54] 2025-06-04 03:27:38,024 | INFO     | intersect: -8137042666.656202
[2025-06-04 05:28:54] 2025-06-04 03:27:38,024 | INFO     | chi2: 1.684418577615126
[2025-06-04 05:28:54] 2025-06-04 03:27:38,025 | INFO     | sum of square deviations: 3822136780.0
[2025-06-04 05:28:54] 2025-06-04 03:27:38,026 | INFO     | sum of deviations: 18698008957.0
[2025-06-04 05:28:54] 2025-06-04 03:27:38,027 | INFO     | mean x: 1749000281.0
[2025-06-04 05:28:54] 2025-06-04 03:27:38,027 | INFO     | mean y: 2332871.6926406925
[2025-06-04 05:28:54] 2025-06-04 03:27:38,027 | INFO     | -- intersect: -8553829506.131399
[2025-06-04 05:28:54] 2025-06-04 03:27:38,027 | INFO     | intersect: -8553829506.131399
[2025-06-04 05:28:54] 2025-06-04 03:27:38,027 | INFO     | chi2: 1.6853323974352852
[2025-06-04 05:28:54] 2025-06-04 03:27:38,027 | INFO     | current chi2=1.6853323974352852 (change=-0.05425135012777422 %)
[2025-06-04 05:28:54] 2025-06-04 03:27:38,028 | INFO     | right removable region: 230
[2025-06-04 05:28:54] 2025-06-04 03:27:38,028 | INFO     | sum of square deviations: 3822136780.0
[2025-06-04 05:28:54] 2025-06-04 03:27:38,029 | INFO     | sum of deviations: -19389827402.999996
[2025-06-04 05:28:54] 2025-06-04 03:27:38,030 | INFO     | mean x: 1749000586.0
[2025-06-04 05:28:54] 2025-06-04 03:27:38,030 | INFO     | mean y: 2355903.316017316
[2025-06-04 05:28:54] 2025-06-04 03:27:38,030 | INFO     | -- intersect: 8875094228.05118
[2025-06-04 05:28:54] 2025-06-04 03:27:38,030 | INFO     | intersect: 8875094228.05118
[2025-06-04 05:28:54] 2025-06-04 03:27:38,030 | INFO     | chi2: 0.021168595866879927
[2025-06-04 05:28:54] 2025-06-04 03:27:38,031 | INFO     | current chi2=0.021168595866879927 (change=98.74326986485441 %)
[2025-06-04 05:28:54] 2025-06-04 03:27:38,031 | INFO     | sum of square deviations: 3579276412.5
[2025-06-04 05:28:54] 2025-06-04 03:27:38,033 | INFO     | sum of deviations: -18156244655.0
[2025-06-04 05:28:54] 2025-06-04 03:27:38,033 | INFO     | mean x: 1749000738.5
[2025-06-04 05:28:54] 2025-06-04 03:27:38,033 | INFO     | mean y: 2355129.9911504425
[2025-06-04 05:28:54] 2025-06-04 03:27:38,033 | INFO     | -- intersect: 8874339757.689047
[2025-06-04 05:28:54] 2025-06-04 03:27:38,033 | INFO     | intersect: 8874339757.689047
[2025-06-04 05:28:54] 2025-06-04 03:27:38,033 | INFO     | chi2: 0.021094646596188305
[2025-06-04 05:28:54] 2025-06-04 03:27:38,033 | INFO     | current chi2=0.021094646596188305 (change=0.34933479365687203 %)
[2025-06-04 05:28:54] 2025-06-04 03:27:38,034 | INFO     | left removable region: 20
[2025-06-04 05:28:54] 2025-06-04 03:27:38,034 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 05:28:54] 2025-06-04 03:27:38,035 | INFO     | sum of deviations: -14439148319.499998
[2025-06-04 05:28:54] 2025-06-04 03:27:38,035 | INFO     | mean x: 1749000860.5
[2025-06-04 05:28:54] 2025-06-04 03:27:38,036 | INFO     | mean y: 2353301.8238095236
[2025-06-04 05:28:54] 2025-06-04 03:27:38,036 | INFO     | -- intersect: 8796731545.03195
[2025-06-04 05:28:54] 2025-06-04 03:27:38,036 | INFO     | intersect: 8796731545.03195
[2025-06-04 05:28:54] 2025-06-04 03:27:38,036 | INFO     | chi2: 0.020216353970236453
[2025-06-04 05:28:54] 2025-06-04 03:27:38,036 | INFO     | -- intersect: 8796731545.03195
[2025-06-04 05:28:54] 2025-06-04 03:27:38,036 | INFO     | current memory leak: -5.03 B/s (using 210 data points, chi2=0.02)
[2025-06-04 05:28:54] 2025-06-04 03:27:38,037 | INFO     | ..............................
[2025-06-04 05:28:54] 2025-06-04 03:27:38,037 | INFO     | . Timing measurements:
[2025-06-04 05:28:54] 2025-06-04 03:27:38,037 | INFO     | . get job = 0 s
[2025-06-04 05:28:54] 2025-06-04 03:27:38,037 | INFO     | . initial setup = 1 s
[2025-06-04 05:28:54] 2025-06-04 03:27:38,037 | INFO     | . payload setup = 7 s
[2025-06-04 05:28:54] 2025-06-04 03:27:38,037 | INFO     | . stage-in = 0 s
[2025-06-04 05:28:54] 2025-06-04 03:27:38,038 | INFO     | . payload execution = 14384 s
[2025-06-04 05:28:54] 2025-06-04 03:27:38,038 | INFO     | . stage-out = 1 s
[2025-06-04 05:28:54] 2025-06-04 03:27:38,038 | INFO     | . log creation = 0 s
[2025-06-04 05:28:54] 2025-06-04 03:27:38,038 | INFO     | ..............................
[2025-06-04 05:28:54] 2025-06-04 03:27:38,138 | INFO     | 
[2025-06-04 05:28:54] 2025-06-04 03:27:38,138 | INFO     | job summary report
[2025-06-04 05:28:54] 2025-06-04 03:27:38,139 | INFO     | --------------------------------------------------
[2025-06-04 05:28:54] 2025-06-04 03:27:38,139 | INFO     | PanDA job id: 6669239100
[2025-06-04 05:28:54] 2025-06-04 03:27:38,139 | INFO     | task id: 44871837
[2025-06-04 05:28:54] 2025-06-04 03:27:38,139 | INFO     | errors: (none)
[2025-06-04 05:28:54] 2025-06-04 03:27:38,139 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:28:54] 2025-06-04 03:27:38,139 | INFO     | pilot state: finished 
[2025-06-04 05:28:54] 2025-06-04 03:27:38,139 | INFO     | transexitcode: 0
[2025-06-04 05:28:54] 2025-06-04 03:27:38,139 | INFO     | exeerrorcode: 0
[2025-06-04 05:28:54] 2025-06-04 03:27:38,139 | INFO     | exeerrordiag: 
[2025-06-04 05:28:54] 2025-06-04 03:27:38,139 | INFO     | exitcode: 0
[2025-06-04 05:28:54] 2025-06-04 03:27:38,139 | INFO     | exitmsg: OK
[2025-06-04 05:28:54] 2025-06-04 03:27:38,140 | INFO     | cpuconsumptiontime: 55728 s
[2025-06-04 05:28:54] 2025-06-04 03:27:38,140 | INFO     | nevents: 400
[2025-06-04 05:28:54] 2025-06-04 03:27:38,140 | INFO     | neventsw: 0
[2025-06-04 05:28:54] 2025-06-04 03:27:38,140 | INFO     | pid: 3038679
[2025-06-04 05:28:54] 2025-06-04 03:27:38,140 | INFO     | pgrp: 3038679
[2025-06-04 05:28:54] 2025-06-04 03:27:38,140 | INFO     | corecount: 4
[2025-06-04 05:28:54] 2025-06-04 03:27:38,140 | INFO     | event service: False
[2025-06-04 05:28:54] 2025-06-04 03:27:38,140 | INFO     | sizes: {0: 2405074, 1: 2405273, 5: 2405479, 11: 2405535, 14395: 2435920, 14396: 2444883, 14398: 2445067, 14404: 2445237}
[2025-06-04 05:28:54] 2025-06-04 03:27:38,140 | INFO     | --------------------------------------------------
[2025-06-04 05:28:54] 2025-06-04 03:27:38,140 | INFO     | 
[2025-06-04 05:28:54] 2025-06-04 03:27:38,140 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-04 05:28:54] 2025-06-04 03:27:38,164 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:28:54] 2025-06-04 03:27:38,164 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:28:54] 2025-06-04 03:27:38,164 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:28:54] 2025-06-04 03:27:38,165 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:28:54] 2025-06-04 03:27:38,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:28:54] 2025-06-04 03:27:38,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:28:54] 2025-06-04 03:27:38,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:28:54] 2025-06-04 03:27:38,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:28:54] 2025-06-04 03:27:38,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:28:54] 2025-06-04 03:27:38,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:28:54] 2025-06-04 03:27:38,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:28:54] 2025-06-04 03:27:38,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:28:54] 2025-06-04 03:27:38,166 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:28:54] 2025-06-04 03:27:38,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:28:54] 2025-06-04 03:27:38,166 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:28:54] 2025-06-04 03:27:38,166 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:28:54] 2025-06-04 03:27:38,166 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:28:54] 2025-06-04 03:27:38,166 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:28:54] 2025-06-04 03:27:38,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:28:54] 2025-06-04 03:27:38,166 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:28:54] 2025-06-04 03:27:38,167 | INFO     | job 6669239100 has completed (purged errors)
[2025-06-04 05:28:54] 2025-06-04 03:27:38,167 | INFO     | overall cleanup function is called
[2025-06-04 05:28:54] 2025-06-04 03:27:39,176 | INFO     | --- collectZombieJob: --- 10, [3038679]
[2025-06-04 05:28:54] 2025-06-04 03:27:39,176 | INFO     | zombie collector waiting for pid 3038679
[2025-06-04 05:28:54] 2025-06-04 03:27:39,177 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:28:54] 2025-06-04 03:27:39,177 | INFO     | collected zombie processes
[2025-06-04 05:28:54] 2025-06-04 03:27:39,177 | INFO     | will attempt to kill all subprocesses of pid=3038679
[2025-06-04 05:28:54] 2025-06-04 03:27:39,596 | INFO     | process IDs to be killed: [3038679] (in reverse order)
[2025-06-04 05:28:54] 2025-06-04 03:27:39,720 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:28:54] 2025-06-04 03:27:39,721 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:28:54] 2025-06-04 03:27:39,737 | INFO     | did not find any defunct processes belonging to 3038679
[2025-06-04 05:28:54] 2025-06-04 03:27:39,753 | INFO     | did not find any defunct processes belonging to 3038679
[2025-06-04 05:28:54] 2025-06-04 03:27:39,754 | INFO     | ready for new job
[2025-06-04 05:28:54] 2025-06-04 03:27:39,754 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:28:54] 2025-06-04 03:27:39,756 | INFO     | **************************************
[2025-06-04 05:28:54] 2025-06-04 03:27:39,757 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:28:54] 2025-06-04 03:27:39,757 | INFO     | **************************************
[2025-06-04 05:28:54] 2025-06-04 03:27:39,757 | INFO     | 
[2025-06-04 05:28:54] 2025-06-04 03:27:39,761 | INFO     | architecture information:
[2025-06-04 05:28:54] 2025-06-04 03:27:39,762 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:28:54] 2025-06-04 03:27:39,778 | INFO     | cat /etc/os-release:
[2025-06-04 05:28:54] NAME="CentOS Linux"
[2025-06-04 05:28:54] VERSION="7 (Core)"
[2025-06-04 05:28:54] ID="centos"
[2025-06-04 05:28:54] ID_LIKE="rhel fedora"
[2025-06-04 05:28:54] VERSION_ID="7"
[2025-06-04 05:28:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:28:54] ANSI_COLOR="0;31"
[2025-06-04 05:28:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:28:54] HOME_URL="https://www.centos.org/"
[2025-06-04 05:28:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:28:54] 
[2025-06-04 05:28:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:28:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:28:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:28:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:28:54] 
[2025-06-04 05:28:54] 2025-06-04 03:27:39,779 | INFO     | **************************************
[2025-06-04 05:28:54] 2025-06-04 03:27:40,282 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-04 05:28:54] 2025-06-04 03:27:40,300 | INFO     | sufficient remaining disk space (650339418112 B)
[2025-06-04 05:28:54] 2025-06-04 03:27:40,301 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:28:54] 2025-06-04 03:27:40,301 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:28:54] 2025-06-04 03:27:40,301 | INFO     | update_server=False
[2025-06-04 05:28:54] 2025-06-04 03:27:40,301 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:28:54] 2025-06-04 03:27:40,301 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:28:54] 2025-06-04 03:27:40,302 | INFO     | aborting loop
[2025-06-04 05:28:54] 2025-06-04 03:27:40,302 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 05:28:54] 2025-06-04 03:27:40,303 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:28:54] 2025-06-04 03:27:40,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:28:54] 2025-06-04 03:27:40,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:28:54] 2025-06-04 03:27:40,452 | INFO     | all data control threads have been joined
[2025-06-04 05:28:54] 2025-06-04 03:27:40,460 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:28:54] 2025-06-04 03:27:40,845 | INFO     | all payload control threads have been joined
[2025-06-04 05:28:54] 2025-06-04 03:27:41,306 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:28:54] 2025-06-04 03:27:41,307 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:28:54] 2025-06-04 03:27:41,323 | INFO     | all job control threads have been joined
[2025-06-04 05:28:54] 2025-06-04 03:27:41,323 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:28:54] 2025-06-04 03:27:41,458 | INFO     | [data] control thread has finished
[2025-06-04 05:28:54] 2025-06-04 03:27:41,500 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:28:54] 2025-06-04 03:27:41,850 | INFO     | [payload] control thread has finished
[2025-06-04 05:28:54] 2025-06-04 03:27:42,007 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:28:54] 2025-06-04 03:27:42,064 | INFO     | [job] validate thread has finished
[2025-06-04 05:28:54] 2025-06-04 03:27:42,302 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:28:54] 2025-06-04 03:27:42,308 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:28:54] 2025-06-04 03:27:42,324 | INFO     | [job] control thread has finished
[2025-06-04 05:28:54] 2025-06-04 03:27:42,425 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:28:54] 2025-06-04 03:27:42,450 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:28:54] 2025-06-04 03:27:42,465 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:28:54] 2025-06-04 03:27:42,599 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:28:54] 2025-06-04 03:27:43,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:28:54] 2025-06-04 03:27:44,150 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:28:54] 2025-06-04 03:27:46,012 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:28:54] 2025-06-04 03:27:46,197 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23223679153984)>', '<ExcThread(monitor, started 23223439685376)>']
[2025-06-04 05:28:54] 2025-06-04 03:27:46,333 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:28:54] 2025-06-04 03:27:46,333 | INFO     | [monitor] control thread has ended
[2025-06-04 05:28:54] 2025-06-04 03:27:51,223 | INFO     | all workflow threads have been joined
[2025-06-04 05:28:54] 2025-06-04 03:27:51,223 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:28:54] 2025-06-04 03:27:51,223 | INFO     | traces error code: 0
[2025-06-04 05:28:54] 2025-06-04 03:27:51,224 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:28:54] 2025-06-04 03:27:51,424 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:28:54] 2025-06-04 03:27:51,428 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:28:54] 2025-06-04 03:27:51,431 [wrapper] pilotpid: 3013822
[2025-06-04 05:28:54] 2025-06-04 03:27:51,434 [wrapper] Pilot exit status: 0
[2025-06-04 05:28:54] 2025-06-04 03:27:51,447 [wrapper] pandaids: 6669239100
[2025-06-04 05:28:54] 2025-06-04 03:27:51,524 [wrapper] cleanup supervisor_pilot 3479502 3013823
[2025-06-04 05:28:54] 2025-06-04 03:27:51,527 [wrapper] Test setup, not cleaning
[2025-06-04 05:28:54] 2025-06-04 03:27:51,531 [wrapper] apfmon messages muted
[2025-06-04 05:28:54] 2025-06-04 03:27:51,534 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:28:54] 2025-06-04 03:27:51,538 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:28:54]  *** Error codes and diagnostics ***
[2025-06-04 05:28:54]     "exeErrorCode": 0,
[2025-06-04 05:28:54]     "exeErrorDiag": "",
[2025-06-04 05:28:54]     "pilotErrorCode": 0,
[2025-06-04 05:28:54]     "pilotErrorDiag": "",
[2025-06-04 05:28:54]  *** Listing of results directory ***
[2025-06-04 05:28:54] total 419892
[2025-06-04 05:28:54] -rw-r--r-- 1 boinc boinc    495897 May 29 06:58 pilot3.tar.gz
[2025-06-04 05:28:54] -rw-r--r-- 1 boinc boinc      5111 May 29 07:28 queuedata.json
[2025-06-04 05:28:54] -rwx------ 1 boinc boinc     37140 May 29 07:29 runpilot2-wrapper.sh
[2025-06-04 05:28:54] -rw-r--r-- 1 boinc boinc       100 Jun  4 01:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:28:54] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 01:27 run_atlas
[2025-06-04 05:28:54] -rw-r--r-- 1 boinc boinc       105 Jun  4 01:27 job.xml
[2025-06-04 05:28:54] -rw-r--r-- 2 boinc boinc 222867645 Jun  4 01:27 EVNT.44871834._003773.pool.root.1
[2025-06-04 05:28:54] -rw-r--r-- 1 boinc boinc      6636 Jun  4 01:27 init_data.xml
[2025-06-04 05:28:54] -rw-r--r-- 2 boinc boinc     15093 Jun  4 01:27 start_atlas.sh
[2025-06-04 05:28:54] drwxrwx--x 2 boinc boinc      4096 Jun  4 01:27 shared
[2025-06-04 05:28:54] -rw-r--r-- 2 boinc boinc    508882 Jun  4 01:27 input.tar.gz
[2025-06-04 05:28:54] -rw-r--r-- 1 boinc boinc         0 Jun  4 01:27 boinc_lockfile
[2025-06-04 05:28:54] -rw-r--r-- 1 boinc boinc      2559 Jun  4 01:27 pandaJob.out
[2025-06-04 05:28:54] -rw------- 1 boinc boinc    986077 Jun  4 01:27 agis_schedconf.cvmfs.json
[2025-06-04 05:28:54] drwx------ 4 boinc boinc      4096 Jun  4 01:27 pilot3
[2025-06-04 05:28:54] -rw------- 1 boinc boinc 199917635 Jun  4 05:26 HITS.44871837._095615.pool.root.1
[2025-06-04 05:28:54] -rw-r--r-- 1 boinc boinc       529 Jun  4 05:27 boinc_task_state.xml
[2025-06-04 05:28:54] -rw------- 1 boinc boinc      1036 Jun  4 05:27 memory_monitor_summary.json
[2025-06-04 05:28:54] -rw------- 1 boinc boinc        95 Jun  4 05:27 pilot_heartbeat.json
[2025-06-04 05:28:54] -rw------- 1 boinc boinc   1603667 Jun  4 05:27 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:28:54] -rw------- 1 boinc boinc    340424 Jun  4 05:27 log.44871837._095615.job.log.tgz.1
[2025-06-04 05:28:54] -rw------- 1 boinc boinc      7732 Jun  4 05:27 heartbeat.json
[2025-06-04 05:28:54] -rw------- 1 boinc boinc      4486 Jun  4 05:27 pilotlog.txt
[2025-06-04 05:28:54] -rw------- 1 boinc boinc   1330600 Jun  4 05:27 log.44871837._095615.job.log.1
[2025-06-04 05:28:54] -rw------- 1 boinc boinc       357 Jun  4 05:27 output.list
[2025-06-04 05:28:54] -rw-r--r-- 1 boinc boinc       620 Jun  4 05:27 runtime_log
[2025-06-04 05:28:54] -rw------- 1 boinc boinc   1689600 Jun  4 05:27 result.tar.gz
[2025-06-04 05:28:54] -rw-r--r-- 1 boinc boinc      9026 Jun  4 05:27 runtime_log.err
[2025-06-04 05:28:54] -rw------- 1 boinc boinc       665 Jun  4 05:27 0WzLDme0ke7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYsdKDms5jRXo.diag
[2025-06-04 05:28:54] -rw-r--r-- 1 boinc boinc        27 Jun  4 05:28 wrapper_checkpoint.txt
[2025-06-04 05:28:54] -rw-r--r-- 1 boinc boinc      8192 Jun  4 05:28 boinc_mmap_file
[2025-06-04 05:28:54] -rw-r--r-- 1 boinc boinc     20940 Jun  4 05:28 stderr.txt
[2025-06-04 05:28:54] HITS file was successfully produced:
[2025-06-04 05:28:54] -rw------- 1 boinc boinc 199917635 Jun  4 05:26 shared/HITS.pool.root.1
[2025-06-04 05:28:54]  *** Contents of shared directory: ***
[2025-06-04 05:28:54] total 415060
[2025-06-04 05:28:54] -rw-r--r-- 2 boinc boinc 222867645 Jun  4 01:27 ATLAS.root_0
[2025-06-04 05:28:54] -rw-r--r-- 2 boinc boinc     15093 Jun  4 01:27 start_atlas.sh
[2025-06-04 05:28:54] -rw-r--r-- 2 boinc boinc    508882 Jun  4 01:27 input.tar.gz
[2025-06-04 05:28:54] -rw------- 1 boinc boinc 199917635 Jun  4 05:26 HITS.pool.root.1
[2025-06-04 05:28:54] -rw------- 1 boinc boinc   1689600 Jun  4 05:27 result.tar.gz
05:28:56 (3006735): run_atlas exited; CPU time 56325.827216
05:28:56 (3006735): called boinc_finish(0)

</stderr_txt>
]]>

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