Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:58:22 (496400): wrapper (7.7.26015): starting
01:58:22 (496400): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 01:58:22] Arguments: --nthreads 4
[2025-06-05 01:58:22] Threads: 4
[2025-06-05 01:58:22] Checking for CVMFS
[2025-06-05 01:58:22] No cvmfs_config command found, will try listing directly
[2025-06-05 01:58:22] CVMFS is ok
[2025-06-05 01:58:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 01:58:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 01:58:22] Further information can be found at the LHC@home message board.
[2025-06-05 01:58:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:58:22] Checking for apptainer binary...
[2025-06-05 01:58:22] which: no apptainer in ((null))
[2025-06-05 01:58:22] apptainer is not installed, using version from CVMFS
[2025-06-05 01:58:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:58:23] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-06-05 01:58:23] apptainer works
[2025-06-05 01:58:23] Set ATHENA_PROC_NUMBER=4
[2025-06-05 01:58:23] Set ATHENA_CORE_NUMBER=4
[2025-06-05 01:58:23] Starting ATLAS job with PandaID=6669239067
[2025-06-05 01:58:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:04:19]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:04:19] 2025-06-05 03:03:56,621 | INFO     | PID=503850 has CPU usage=14.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 05:04:19] 2025-06-05 03:03:56,621 | INFO     | .. there are 15 such processes running
[2025-06-05 05:04:19] 2025-06-05 03:03:56,728 | INFO     | monitor loop #772: job 0:6669239067 is in state 'finished'
[2025-06-05 05:04:19] 2025-06-05 03:03:56,728 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:04:19] 2025-06-05 03:03:58,740 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 05:04:19] 2025-06-05 03:03:58,740 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6669239067/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:04:19] 2025-06-05 03:03:58,741 | INFO     | extracted standard info from prmon json
[2025-06-05 05:04:19] 2025-06-05 03:03:58,741 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:04:19] 2025-06-05 03:03:58,741 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:04:19] 2025-06-05 03:03:58,741 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:04:19] 2025-06-05 03:03:58,742 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:04:19] 2025-06-05 03:03:58,745 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:04:19] 2025-06-05 03:03:58,745 | INFO     | sum of square deviations: 1869302025.5
[2025-06-05 05:04:19] 2025-06-05 03:03:58,746 | INFO     | sum of deviations: 30028532830.0
[2025-06-05 05:04:19] 2025-06-05 03:03:58,746 | INFO     | mean x: 1749087070.5
[2025-06-05 05:04:19] 2025-06-05 03:03:58,747 | INFO     | mean y: 2302215.758241758
[2025-06-05 05:04:19] 2025-06-05 03:03:58,747 | INFO     | -- intersect: -28095093391.02663
[2025-06-05 05:04:19] 2025-06-05 03:03:58,747 | INFO     | intersect: -28095093391.02663
[2025-06-05 05:04:19] 2025-06-05 03:03:58,747 | INFO     | chi2: 1.6158549362221406
[2025-06-05 05:04:19] 2025-06-05 03:03:58,747 | INFO     | sum of square deviations: 1719429448.0
[2025-06-05 05:04:19] 2025-06-05 03:03:58,748 | INFO     | sum of deviations: 29108661491.999996
[2025-06-05 05:04:19] 2025-06-05 03:03:58,748 | INFO     | mean x: 1749086918.0
[2025-06-05 05:04:19] 2025-06-05 03:03:58,748 | INFO     | mean y: 2301279.4915254237
[2025-06-05 05:04:19] 2025-06-05 03:03:58,749 | INFO     | -- intersect: -29608439117.777485
[2025-06-05 05:04:19] 2025-06-05 03:03:58,749 | INFO     | intersect: -29608439117.777485
[2025-06-05 05:04:19] 2025-06-05 03:03:58,749 | INFO     | chi2: 1.6169056641315074
[2025-06-05 05:04:19] 2025-06-05 03:03:58,749 | INFO     | current chi2=1.6169056641315074 (change=-0.06502612863400803 %)
[2025-06-05 05:04:19] 2025-06-05 03:03:58,749 | INFO     | right removable region: 176
[2025-06-05 05:04:19] 2025-06-05 03:03:58,749 | INFO     | sum of square deviations: 1719429448.0
[2025-06-05 05:04:19] 2025-06-05 03:03:58,750 | INFO     | sum of deviations: 1269301358.9999998
[2025-06-05 05:04:19] 2025-06-05 03:03:58,750 | INFO     | mean x: 1749087223.0
[2025-06-05 05:04:19] 2025-06-05 03:03:58,751 | INFO     | mean y: 2331152.175141243
[2025-06-05 05:04:19] 2025-06-05 03:03:58,751 | INFO     | -- intersect: -1288863896.1275532
[2025-06-05 05:04:19] 2025-06-05 03:03:58,751 | INFO     | intersect: -1288863896.1275532
[2025-06-05 05:04:19] 2025-06-05 03:03:58,751 | INFO     | chi2: 0.00184744300869979
[2025-06-05 05:04:19] 2025-06-05 03:03:58,751 | INFO     | current chi2=0.00184744300869979 (change=99.88566776835678 %)
[2025-06-05 05:04:19] 2025-06-05 03:03:58,751 | INFO     | sum of square deviations: 1577789583.0
[2025-06-05 05:04:19] 2025-06-05 03:03:58,752 | INFO     | sum of deviations: 1082992383.5
[2025-06-05 05:04:19] 2025-06-05 03:03:58,753 | INFO     | mean x: 1749087375.5
[2025-06-05 05:04:19] 2025-06-05 03:03:58,753 | INFO     | mean y: 2331348.75
[2025-06-05 05:04:19] 2025-06-05 03:03:58,753 | INFO     | -- intersect: -1198239580.4488046
[2025-06-05 05:04:19] 2025-06-05 03:03:58,753 | INFO     | intersect: -1198239580.4488046
[2025-06-05 05:04:19] 2025-06-05 03:03:58,753 | INFO     | chi2: 0.0017374560898601517
[2025-06-05 05:04:19] 2025-06-05 03:03:58,753 | INFO     | current chi2=0.0017374560898601517 (change=5.953467485692341 %)
[2025-06-05 05:04:19] 2025-06-05 03:03:58,753 | INFO     | left removable region: 20
[2025-06-05 05:04:19] 2025-06-05 03:03:58,754 | INFO     | sum of square deviations: 1177156955.0
[2025-06-05 05:04:19] 2025-06-05 03:03:58,754 | INFO     | sum of deviations: 1785257750.5
[2025-06-05 05:04:19] 2025-06-05 03:03:58,754 | INFO     | mean x: 1749087497.5
[2025-06-05 05:04:19] 2025-06-05 03:03:58,755 | INFO     | mean y: 2330175.2243589745
[2025-06-05 05:04:19] 2025-06-05 03:03:58,755 | INFO     | -- intersect: -2650308453.7633314
[2025-06-05 05:04:19] 2025-06-05 03:03:58,755 | INFO     | intersect: -2650308453.7633314
[2025-06-05 05:04:19] 2025-06-05 03:03:58,755 | INFO     | chi2: 0.00016966061849027717
[2025-06-05 05:04:19] 2025-06-05 03:03:58,755 | INFO     | -- intersect: -2650308453.7633314
[2025-06-05 05:04:19] 2025-06-05 03:03:58,755 | INFO     | current memory leak: 1.52 B/s (using 156 data points, chi2=0.00)
[2025-06-05 05:04:19] 2025-06-05 03:03:58,756 | INFO     | ..............................
[2025-06-05 05:04:19] 2025-06-05 03:03:58,756 | INFO     | . Timing measurements:
[2025-06-05 05:04:19] 2025-06-05 03:03:58,756 | INFO     | . get job = 0 s
[2025-06-05 05:04:19] 2025-06-05 03:03:58,756 | INFO     | . initial setup = 1 s
[2025-06-05 05:04:19] 2025-06-05 03:03:58,756 | INFO     | . payload setup = 9 s
[2025-06-05 05:04:19] 2025-06-05 03:03:58,756 | INFO     | . stage-in = 0 s
[2025-06-05 05:04:19] 2025-06-05 03:03:58,756 | INFO     | . payload execution = 11081 s
[2025-06-05 05:04:19] 2025-06-05 03:03:58,756 | INFO     | . stage-out = 1 s
[2025-06-05 05:04:19] 2025-06-05 03:03:58,756 | INFO     | . log creation = 0 s
[2025-06-05 05:04:19] 2025-06-05 03:03:58,756 | INFO     | ..............................
[2025-06-05 05:04:19] 2025-06-05 03:03:58,844 | INFO     | 
[2025-06-05 05:04:19] 2025-06-05 03:03:58,844 | INFO     | job summary report
[2025-06-05 05:04:19] 2025-06-05 03:03:58,844 | INFO     | --------------------------------------------------
[2025-06-05 05:04:19] 2025-06-05 03:03:58,844 | INFO     | PanDA job id: 6669239067
[2025-06-05 05:04:19] 2025-06-05 03:03:58,845 | INFO     | task id: 44871837
[2025-06-05 05:04:19] 2025-06-05 03:03:58,845 | INFO     | errors: (none)
[2025-06-05 05:04:19] 2025-06-05 03:03:58,845 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:04:19] 2025-06-05 03:03:58,845 | INFO     | pilot state: finished 
[2025-06-05 05:04:19] 2025-06-05 03:03:58,845 | INFO     | transexitcode: 0
[2025-06-05 05:04:19] 2025-06-05 03:03:58,845 | INFO     | exeerrorcode: 0
[2025-06-05 05:04:19] 2025-06-05 03:03:58,845 | INFO     | exeerrordiag: 
[2025-06-05 05:04:19] 2025-06-05 03:03:58,845 | INFO     | exitcode: 0
[2025-06-05 05:04:19] 2025-06-05 03:03:58,845 | INFO     | exitmsg: OK
[2025-06-05 05:04:19] 2025-06-05 03:03:58,845 | INFO     | cpuconsumptiontime: 42317 s
[2025-06-05 05:04:19] 2025-06-05 03:03:58,845 | INFO     | nevents: 400
[2025-06-05 05:04:19] 2025-06-05 03:03:58,845 | INFO     | neventsw: 0
[2025-06-05 05:04:19] 2025-06-05 03:03:58,845 | INFO     | pid: 519369
[2025-06-05 05:04:19] 2025-06-05 03:03:58,846 | INFO     | pgrp: 519369
[2025-06-05 05:04:19] 2025-06-05 03:03:58,846 | INFO     | corecount: 4
[2025-06-05 05:04:19] 2025-06-05 03:03:58,846 | INFO     | event service: False
[2025-06-05 05:04:19] 2025-06-05 03:03:58,846 | INFO     | sizes: {0: 2397233, 1: 2397432, 7: 2397638, 11: 2397666, 11095: 2427189, 11096: 2427188, 11099: 2436393, 11106: 2436507}
[2025-06-05 05:04:19] 2025-06-05 03:03:58,846 | INFO     | --------------------------------------------------
[2025-06-05 05:04:19] 2025-06-05 03:03:58,846 | INFO     | 
[2025-06-05 05:04:19] 2025-06-05 03:03:58,846 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-06-05 05:04:19] 2025-06-05 03:03:58,873 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:03:58,873 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:03:58,873 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:03:58,873 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:03:58,874 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:03:58,874 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:03:58,874 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:03:58,874 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:03:58,874 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:03:58,874 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:03:58,874 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:03:58,874 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:03:58,874 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:03:58,874 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:03:58,875 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:03:58,875 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:03:58,875 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:03:58,875 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:04:19] 2025-06-05 03:03:58,875 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:03:58,875 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:04:19] 2025-06-05 03:03:58,875 | INFO     | job 6669239067 has completed (purged errors)
[2025-06-05 05:04:19] 2025-06-05 03:03:58,875 | INFO     | overall cleanup function is called
[2025-06-05 05:04:19] 2025-06-05 03:03:59,885 | INFO     | --- collectZombieJob: --- 10, [519369]
[2025-06-05 05:04:19] 2025-06-05 03:03:59,886 | INFO     | zombie collector waiting for pid 519369
[2025-06-05 05:04:19] 2025-06-05 03:03:59,886 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:04:19] 2025-06-05 03:03:59,886 | INFO     | collected zombie processes
[2025-06-05 05:04:19] 2025-06-05 03:03:59,886 | INFO     | will attempt to kill all subprocesses of pid=519369
[2025-06-05 05:04:19] 2025-06-05 03:04:00,591 | INFO     | process IDs to be killed: [519369] (in reverse order)
[2025-06-05 05:04:19] 2025-06-05 03:04:00,836 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:04:19] 2025-06-05 03:04:00,836 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:04:19] 2025-06-05 03:04:00,862 | INFO     | did not find any defunct processes belonging to 519369
[2025-06-05 05:04:19] 2025-06-05 03:04:00,885 | INFO     | did not find any defunct processes belonging to 519369
[2025-06-05 05:04:19] 2025-06-05 03:04:00,885 | INFO     | ready for new job
[2025-06-05 05:04:19] 2025-06-05 03:04:00,885 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:04:19] 2025-06-05 03:04:00,887 | INFO     | **************************************
[2025-06-05 05:04:19] 2025-06-05 03:04:00,887 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:04:19] 2025-06-05 03:04:00,887 | INFO     | **************************************
[2025-06-05 05:04:19] 2025-06-05 03:04:00,888 | INFO     | 
[2025-06-05 05:04:19] 2025-06-05 03:04:00,896 | INFO     | architecture information:
[2025-06-05 05:04:19] 2025-06-05 03:04:00,896 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:04:19] 2025-06-05 03:04:00,915 | INFO     | cat /etc/os-release:
[2025-06-05 05:04:19] NAME="CentOS Linux"
[2025-06-05 05:04:19] VERSION="7 (Core)"
[2025-06-05 05:04:19] ID="centos"
[2025-06-05 05:04:19] ID_LIKE="rhel fedora"
[2025-06-05 05:04:19] VERSION_ID="7"
[2025-06-05 05:04:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:04:19] ANSI_COLOR="0;31"
[2025-06-05 05:04:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:04:19] HOME_URL="https://www.centos.org/"
[2025-06-05 05:04:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:04:19] 
[2025-06-05 05:04:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:04:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:04:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:04:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:04:19] 
[2025-06-05 05:04:19] 2025-06-05 03:04:00,916 | INFO     | **************************************
[2025-06-05 05:04:19] 2025-06-05 03:04:01,419 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-06-05 05:04:19] 2025-06-05 03:04:01,442 | INFO     | sufficient remaining disk space (3285918416896 B)
[2025-06-05 05:04:19] 2025-06-05 03:04:01,442 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:04:19] 2025-06-05 03:04:01,442 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:04:19] 2025-06-05 03:04:01,442 | INFO     | update_server=False
[2025-06-05 05:04:19] 2025-06-05 03:04:01,442 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:04:19] 2025-06-05 03:04:01,443 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 05:04:19] 2025-06-05 03:04:01,443 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:04:19] 2025-06-05 03:04:01,443 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:04:19] 2025-06-05 03:04:01,443 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:04:19] 2025-06-05 03:04:01,740 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 05:04:19] 2025-06-05 03:04:01,740 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 05:04:19] 2025-06-05 03:04:01,741 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:04:19] 2025-06-05 03:04:01,741 | INFO     | will abort loop
[2025-06-05 05:04:19] 2025-06-05 03:04:01,743 | INFO     | all data control threads have been joined
[2025-06-05 05:04:19] 2025-06-05 03:04:01,842 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:04:19] 2025-06-05 03:04:01,918 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:04:19] 2025-06-05 03:04:02,263 | INFO     | all payload control threads have been joined
[2025-06-05 05:04:19] 2025-06-05 03:04:02,343 | INFO     | all job control threads have been joined
[2025-06-05 05:04:19] 2025-06-05 03:04:02,448 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:02,520 | INFO     | [job] validate thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:02,585 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:02,650 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:02,746 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:02,748 | INFO     | [data] control thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:02,784 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:02,821 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:02,954 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:03,268 | INFO     | [payload] control thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:03,272 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:03,348 | INFO     | [job] control thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:03,847 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:03,851 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:04:19] 2025-06-05 03:04:04,856 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:05,924 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:11,534 | INFO     | job.realtimelogging is not enabled
[2025-06-05 05:04:19] 2025-06-05 03:04:12,539 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:04:19] 2025-06-05 03:04:12,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23397832570688)>', '<ExcThread(monitor, started 23397595580160)>']
[2025-06-05 05:04:19] 2025-06-05 03:04:13,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:04:19] 2025-06-05 03:04:13,503 | INFO     | [monitor] control thread has ended
[2025-06-05 05:04:19] 2025-06-05 03:04:17,967 | INFO     | all workflow threads have been joined
[2025-06-05 05:04:19] 2025-06-05 03:04:17,967 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:04:19] 2025-06-05 03:04:17,968 | INFO     | traces error code: 0
[2025-06-05 05:04:19] 2025-06-05 03:04:17,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:04:19] 2025-06-05 03:04:18,107 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:04:19] 2025-06-05 03:04:18,111 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:04:19] 2025-06-05 03:04:18,115 [wrapper] pilotpid: 503850
[2025-06-05 05:04:19] 2025-06-05 03:04:18,118 [wrapper] Pilot exit status: 0
[2025-06-05 05:04:19] 2025-06-05 03:04:18,132 [wrapper] pandaids: 6669239067
[2025-06-05 05:04:19] 2025-06-05 03:04:18,287 [wrapper] cleanup supervisor_pilot 1149061 503853
[2025-06-05 05:04:19] 2025-06-05 03:04:18,291 [wrapper] Test setup, not cleaning
[2025-06-05 05:04:19] 2025-06-05 03:04:18,295 [wrapper] apfmon messages muted
[2025-06-05 05:04:19] 2025-06-05 03:04:18,298 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:04:19] 2025-06-05 03:04:18,302 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:04:19]  *** Error codes and diagnostics ***
[2025-06-05 05:04:19]     "exeErrorCode": 0,
[2025-06-05 05:04:19]     "exeErrorDiag": "",
[2025-06-05 05:04:19]     "pilotErrorCode": 0,
[2025-06-05 05:04:19]     "pilotErrorDiag": "",
[2025-06-05 05:04:19]  *** Listing of results directory ***
[2025-06-05 05:04:19] total 417216
[2025-06-05 05:04:19] -rw-r--r-- 1 boinc boinc    495897 May 29 06:58 pilot3.tar.gz
[2025-06-05 05:04:19] -rw-r--r-- 1 boinc boinc      5111 May 29 07:28 queuedata.json
[2025-06-05 05:04:19] -rwx------ 1 boinc boinc     37140 May 29 07:29 runpilot2-wrapper.sh
[2025-06-05 05:04:19] -rw-r--r-- 1 boinc boinc       100 Jun  5 01:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:04:19] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 01:58 run_atlas
[2025-06-05 05:04:19] -rw-r--r-- 1 boinc boinc       105 Jun  5 01:58 job.xml
[2025-06-05 05:04:19] -rw-r--r-- 1 boinc boinc      6687 Jun  5 01:58 init_data.xml
[2025-06-05 05:04:19] -rw-r--r-- 2 boinc boinc 225509903 Jun  5 01:58 EVNT.44871834._003772.pool.root.1
[2025-06-05 05:04:19] drwxrwx--x 2 boinc boinc      4096 Jun  5 01:58 shared
[2025-06-05 05:04:19] -rw-r--r-- 2 boinc boinc    508875 Jun  5 01:58 input.tar.gz
[2025-06-05 05:04:19] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:58 start_atlas.sh
[2025-06-05 05:04:19] -rw-r--r-- 1 boinc boinc         0 Jun  5 01:58 boinc_lockfile
[2025-06-05 05:04:19] -rw-r--r-- 1 boinc boinc      2559 Jun  5 01:58 pandaJob.out
[2025-06-05 05:04:19] -rw------- 1 boinc boinc    987117 Jun  5 01:58 agis_schedconf.cvmfs.json
[2025-06-05 05:04:19] drwx------ 4 boinc boinc      4096 Jun  5 01:58 pilot3
[2025-06-05 05:04:19] -rw------- 1 boinc boinc        95 Jun  5 05:03 pilot_heartbeat.json
[2025-06-05 05:04:19] -rw------- 1 boinc boinc 195218531 Jun  5 05:03 HITS.44871837._095582.pool.root.1
[2025-06-05 05:04:19] -rw-r--r-- 1 boinc boinc       530 Jun  5 05:03 boinc_task_state.xml
[2025-06-05 05:04:19] -rw------- 1 boinc boinc      1031 Jun  5 05:03 memory_monitor_summary.json
[2025-06-05 05:04:19] -rw------- 1 boinc boinc   1598969 Jun  5 05:03 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:04:19] -rw------- 1 boinc boinc    299452 Jun  5 05:03 log.44871837._095582.job.log.tgz.1
[2025-06-05 05:04:19] -rw-r--r-- 1 boinc boinc        27 Jun  5 05:03 wrapper_checkpoint.txt
[2025-06-05 05:04:19] -rw------- 1 boinc boinc      7703 Jun  5 05:03 heartbeat.json
[2025-06-05 05:04:19] -rw------- 1 boinc boinc      4746 Jun  5 05:04 pilotlog.txt
[2025-06-05 05:04:19] -rw------- 1 boinc boinc   1034945 Jun  5 05:04 log.44871837._095582.job.log.1
[2025-06-05 05:04:19] -rw------- 1 boinc boinc       357 Jun  5 05:04 output.list
[2025-06-05 05:04:19] -rw-r--r-- 1 boinc boinc       620 Jun  5 05:04 runtime_log
[2025-06-05 05:04:19] -rw------- 1 boinc boinc   1351680 Jun  5 05:04 result.tar.gz
[2025-06-05 05:04:19] -rw-r--r-- 1 boinc boinc      9041 Jun  5 05:04 runtime_log.err
[2025-06-05 05:04:19] -rw------- 1 boinc boinc       665 Jun  5 05:04 CmaLDme0ke7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDsdKDmWW4rMo.diag
[2025-06-05 05:04:19] -rw-r--r-- 1 boinc boinc      8192 Jun  5 05:04 boinc_mmap_file
[2025-06-05 05:04:19] -rw-r--r-- 1 boinc boinc     20911 Jun  5 05:04 stderr.txt
[2025-06-05 05:04:19] HITS file was successfully produced:
[2025-06-05 05:04:19] -rw------- 1 boinc boinc 195218531 Jun  5 05:03 shared/HITS.pool.root.1
[2025-06-05 05:04:19]  *** Contents of shared directory: ***
[2025-06-05 05:04:19] total 412716
[2025-06-05 05:04:19] -rw-r--r-- 2 boinc boinc 225509903 Jun  5 01:58 ATLAS.root_0
[2025-06-05 05:04:19] -rw-r--r-- 2 boinc boinc    508875 Jun  5 01:58 input.tar.gz
[2025-06-05 05:04:19] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:58 start_atlas.sh
[2025-06-05 05:04:19] -rw------- 1 boinc boinc 195218531 Jun  5 05:03 HITS.pool.root.1
[2025-06-05 05:04:19] -rw------- 1 boinc boinc   1351680 Jun  5 05:04 result.tar.gz
05:04:20 (496400): run_atlas exited; CPU time 42975.478784
05:04:20 (496400): called boinc_finish(0)

</stderr_txt>
]]>

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