Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:09:00 (1224297): wrapper (7.7.26015): starting
05:09:00 (1224297): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 05:09:00] Arguments: --nthreads 4
[2025-06-05 05:09:00] Threads: 4
[2025-06-05 05:09:00] Checking for CVMFS
[2025-06-05 05:09:00] No cvmfs_config command found, will try listing directly
[2025-06-05 05:09:00] CVMFS is ok
[2025-06-05 05:09:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 05:09:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 05:09:00] Further information can be found at the LHC@home message board.
[2025-06-05 05:09:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:09:00] Checking for apptainer binary...
[2025-06-05 05:09:00] which: no apptainer in ((null))
[2025-06-05 05:09:00] apptainer is not installed, using version from CVMFS
[2025-06-05 05:09:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:09:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-06-05 05:09:00] apptainer works
[2025-06-05 05:09:00] Set ATHENA_PROC_NUMBER=4
[2025-06-05 05:09:00] Set ATHENA_CORE_NUMBER=4
[2025-06-05 05:09:00] Starting ATLAS job with PandaID=6669238827
[2025-06-05 05:09:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:40:29]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:40:29] 2025-06-05 06:39:25,914 | INFO     | mean y: 2331027.974489796
[2025-06-05 08:40:29] 2025-06-05 06:39:25,915 | INFO     | -- intersect: -4085060637.7982903
[2025-06-05 08:40:29] 2025-06-05 06:39:25,915 | INFO     | intersect: -4085060637.7982903
[2025-06-05 08:40:29] 2025-06-05 06:39:25,915 | INFO     | chi2: 0.0012976205196815803
[2025-06-05 08:40:29] 2025-06-05 06:39:25,915 | INFO     | current chi2=0.0012976205196815803 (change=70.84523190244232 %)
[2025-06-05 08:40:29] 2025-06-05 06:39:25,915 | INFO     | sum of square deviations: 2160561440.0
[2025-06-05 08:40:29] 2025-06-05 06:39:25,917 | INFO     | sum of deviations: 5190969948.000001
[2025-06-05 08:40:29] 2025-06-05 06:39:25,917 | INFO     | mean x: 1749099696.0
[2025-06-05 08:40:29] 2025-06-05 06:39:25,917 | INFO     | mean y: 2331269.371727749
[2025-06-05 08:40:29] 2025-06-05 06:39:25,917 | INFO     | -- intersect: -4200059734.1407375
[2025-06-05 08:40:29] 2025-06-05 06:39:25,917 | INFO     | intersect: -4200059734.1407375
[2025-06-05 08:40:29] 2025-06-05 06:39:25,917 | INFO     | chi2: 0.00039824993991472243
[2025-06-05 08:40:29] 2025-06-05 06:39:25,917 | INFO     | current chi2=0.00039824993991472243 (change=69.30921375900807 %)
[2025-06-05 08:40:29] 2025-06-05 06:39:25,918 | INFO     | sum of square deviations: 1995283922.5
[2025-06-05 08:40:29] 2025-06-05 06:39:25,919 | INFO     | sum of deviations: 4497630863.5
[2025-06-05 08:40:29] 2025-06-05 06:39:25,919 | INFO     | mean x: 1749099848.5
[2025-06-05 08:40:29] 2025-06-05 06:39:25,919 | INFO     | mean y: 2331908.865591398
[2025-06-05 08:40:29] 2025-06-05 06:39:25,919 | INFO     | -- intersect: -3940367860.949636
[2025-06-05 08:40:29] 2025-06-05 06:39:25,919 | INFO     | intersect: -3940367860.949636
[2025-06-05 08:40:29] 2025-06-05 06:39:25,920 | INFO     | chi2: 0.00029087779620064484
[2025-06-05 08:40:29] 2025-06-05 06:39:25,920 | INFO     | current chi2=0.00029087779620064484 (change=26.96099432860411 %)
[2025-06-05 08:40:29] 2025-06-05 06:39:25,920 | INFO     | sum of square deviations: 1838657730.0
[2025-06-05 08:40:29] 2025-06-05 06:39:25,921 | INFO     | sum of deviations: 3834234910.0
[2025-06-05 08:40:29] 2025-06-05 06:39:25,921 | INFO     | mean x: 1749100001.0
[2025-06-05 08:40:29] 2025-06-05 06:39:25,921 | INFO     | mean y: 2332554.9226519335
[2025-06-05 08:40:29] 2025-06-05 06:39:25,921 | INFO     | -- intersect: -3645143631.3685484
[2025-06-05 08:40:29] 2025-06-05 06:39:25,921 | INFO     | intersect: -3645143631.3685484
[2025-06-05 08:40:29] 2025-06-05 06:39:25,922 | INFO     | chi2: 0.00016699868854657204
[2025-06-05 08:40:29] 2025-06-05 06:39:25,922 | INFO     | current chi2=0.00016699868854657204 (change=42.58802468670456 %)
[2025-06-05 08:40:29] 2025-06-05 06:39:25,922 | INFO     | sum of square deviations: 1690450300.0
[2025-06-05 08:40:29] 2025-06-05 06:39:25,923 | INFO     | sum of deviations: 3340327853.0000005
[2025-06-05 08:40:29] 2025-06-05 06:39:25,923 | INFO     | mean x: 1749100153.5
[2025-06-05 08:40:29] 2025-06-05 06:39:25,923 | INFO     | mean y: 2333062.852272727
[2025-06-05 08:40:29] 2025-06-05 06:39:25,923 | INFO     | -- intersect: -3453886833.362734
[2025-06-05 08:40:29] 2025-06-05 06:39:25,923 | INFO     | intersect: -3453886833.362734
[2025-06-05 08:40:29] 2025-06-05 06:39:25,924 | INFO     | chi2: 0.00012005339037287256
[2025-06-05 08:40:29] 2025-06-05 06:39:25,924 | INFO     | current chi2=0.00012005339037287256 (change=28.111177747726764 %)
[2025-06-05 08:40:29] 2025-06-05 06:39:25,924 | INFO     | sum of square deviations: 1550429070.0
[2025-06-05 08:40:29] 2025-06-05 06:39:25,925 | INFO     | sum of deviations: 3000422921.0
[2025-06-05 08:40:29] 2025-06-05 06:39:25,925 | INFO     | mean x: 1749100306.0
[2025-06-05 08:40:29] 2025-06-05 06:39:25,925 | INFO     | mean y: 2333431.6315789474
[2025-06-05 08:40:29] 2025-06-05 06:39:25,925 | INFO     | -- intersect: -3382562240.668034
[2025-06-05 08:40:29] 2025-06-05 06:39:25,925 | INFO     | intersect: -3382562240.668034
[2025-06-05 08:40:29] 2025-06-05 06:39:25,926 | INFO     | chi2: 0.00010397256021718167
[2025-06-05 08:40:29] 2025-06-05 06:39:25,926 | INFO     | current chi2=0.00010397256021718167 (change=13.394732215179936 %)
[2025-06-05 08:40:29] 2025-06-05 06:39:25,926 | INFO     | left removable region: 70
[2025-06-05 08:40:29] 2025-06-05 06:39:25,926 | INFO     | sum of square deviations: 681212772.5
[2025-06-05 08:40:29] 2025-06-05 06:39:25,927 | INFO     | sum of deviations: 1344961214.5000007
[2025-06-05 08:40:29] 2025-06-05 06:39:25,927 | INFO     | mean x: 1749101190.5
[2025-06-05 08:40:29] 2025-06-05 06:39:25,927 | INFO     | mean y: 2335352.4846153846
[2025-06-05 08:40:29] 2025-06-05 06:39:25,927 | INFO     | -- intersect: -3451025119.346933
[2025-06-05 08:40:29] 2025-06-05 06:39:25,927 | INFO     | intersect: -3451025119.346933
[2025-06-05 08:40:29] 2025-06-05 06:39:25,927 | INFO     | chi2: 8.401354851995274e-05
[2025-06-05 08:40:29] 2025-06-05 06:39:25,927 | INFO     | -- intersect: -3451025119.346933
[2025-06-05 08:40:29] 2025-06-05 06:39:25,928 | INFO     | current memory leak: 1.97 B/s (using 130 data points, chi2=0.00)
[2025-06-05 08:40:29] 2025-06-05 06:39:25,928 | INFO     | ..............................
[2025-06-05 08:40:29] 2025-06-05 06:39:25,928 | INFO     | . Timing measurements:
[2025-06-05 08:40:29] 2025-06-05 06:39:25,928 | INFO     | . get job = 0 s
[2025-06-05 08:40:29] 2025-06-05 06:39:25,928 | INFO     | . initial setup = 1 s
[2025-06-05 08:40:29] 2025-06-05 06:39:25,929 | INFO     | . payload setup = 9 s
[2025-06-05 08:40:29] 2025-06-05 06:39:25,929 | INFO     | . stage-in = 0 s
[2025-06-05 08:40:29] 2025-06-05 06:39:25,929 | INFO     | . payload execution = 12572 s
[2025-06-05 08:40:29] 2025-06-05 06:39:25,929 | INFO     | . stage-out = 1 s
[2025-06-05 08:40:29] 2025-06-05 06:39:25,929 | INFO     | . log creation = 0 s
[2025-06-05 08:40:29] 2025-06-05 06:39:25,929 | INFO     | ..............................
[2025-06-05 08:40:29] 2025-06-05 06:39:26,027 | INFO     | 
[2025-06-05 08:40:29] 2025-06-05 06:39:26,027 | INFO     | job summary report
[2025-06-05 08:40:29] 2025-06-05 06:39:26,027 | INFO     | --------------------------------------------------
[2025-06-05 08:40:29] 2025-06-05 06:39:26,027 | INFO     | PanDA job id: 6669238827
[2025-06-05 08:40:29] 2025-06-05 06:39:26,027 | INFO     | task id: 44871837
[2025-06-05 08:40:29] 2025-06-05 06:39:26,028 | INFO     | errors: (none)
[2025-06-05 08:40:29] 2025-06-05 06:39:26,028 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:40:29] 2025-06-05 06:39:26,028 | INFO     | pilot state: finished 
[2025-06-05 08:40:29] 2025-06-05 06:39:26,028 | INFO     | transexitcode: 0
[2025-06-05 08:40:29] 2025-06-05 06:39:26,028 | INFO     | exeerrorcode: 0
[2025-06-05 08:40:29] 2025-06-05 06:39:26,028 | INFO     | exeerrordiag: 
[2025-06-05 08:40:29] 2025-06-05 06:39:26,028 | INFO     | exitcode: 0
[2025-06-05 08:40:29] 2025-06-05 06:39:26,028 | INFO     | exitmsg: OK
[2025-06-05 08:40:29] 2025-06-05 06:39:26,028 | INFO     | cpuconsumptiontime: 47498 s
[2025-06-05 08:40:29] 2025-06-05 06:39:26,028 | INFO     | nevents: 400
[2025-06-05 08:40:29] 2025-06-05 06:39:26,028 | INFO     | neventsw: 0
[2025-06-05 08:40:29] 2025-06-05 06:39:26,028 | INFO     | pid: 1250525
[2025-06-05 08:40:29] 2025-06-05 06:39:26,029 | INFO     | pgrp: 1250525
[2025-06-05 08:40:29] 2025-06-05 06:39:26,029 | INFO     | corecount: 4
[2025-06-05 08:40:29] 2025-06-05 06:39:26,029 | INFO     | event service: False
[2025-06-05 08:40:29] 2025-06-05 06:39:26,029 | INFO     | sizes: {0: 2397232, 1: 2397431, 7: 2397637, 11: 2397665, 12586: 2427747, 12587: 2436894, 12596: 2437008}
[2025-06-05 08:40:29] 2025-06-05 06:39:26,029 | INFO     | --------------------------------------------------
[2025-06-05 08:40:29] 2025-06-05 06:39:26,029 | INFO     | 
[2025-06-05 08:40:29] 2025-06-05 06:39:26,029 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2025-06-05 08:40:29] 2025-06-05 06:39:26,058 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:40:29] 2025-06-05 06:39:26,059 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:40:29] 2025-06-05 06:39:26,059 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:40:29] 2025-06-05 06:39:26,059 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:40:29] 2025-06-05 06:39:26,059 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:40:29] 2025-06-05 06:39:26,059 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:40:29] 2025-06-05 06:39:26,059 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:40:29] 2025-06-05 06:39:26,059 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:40:29] 2025-06-05 06:39:26,059 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:40:29] 2025-06-05 06:39:26,059 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:40:29] 2025-06-05 06:39:26,059 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:40:29] 2025-06-05 06:39:26,059 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:40:29] 2025-06-05 06:39:26,059 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:40:29] 2025-06-05 06:39:26,060 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:40:29] 2025-06-05 06:39:26,060 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:40:29] 2025-06-05 06:39:26,060 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:40:29] 2025-06-05 06:39:26,060 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:40:29] 2025-06-05 06:39:26,060 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:40:29] 2025-06-05 06:39:26,060 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:40:29] 2025-06-05 06:39:26,060 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:40:29] 2025-06-05 06:39:26,060 | INFO     | job 6669238827 has completed (purged errors)
[2025-06-05 08:40:29] 2025-06-05 06:39:26,060 | INFO     | overall cleanup function is called
[2025-06-05 08:40:29] 2025-06-05 06:39:27,069 | INFO     | --- collectZombieJob: --- 10, [1250525]
[2025-06-05 08:40:29] 2025-06-05 06:39:27,069 | INFO     | zombie collector waiting for pid 1250525
[2025-06-05 08:40:29] 2025-06-05 06:39:27,069 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:40:29] 2025-06-05 06:39:27,069 | INFO     | collected zombie processes
[2025-06-05 08:40:29] 2025-06-05 06:39:27,070 | INFO     | will attempt to kill all subprocesses of pid=1250525
[2025-06-05 08:40:29] 2025-06-05 06:39:27,436 | INFO     | 12616s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 08:40:29] 2025-06-05 06:39:27,749 | INFO     | process IDs to be killed: [1250525] (in reverse order)
[2025-06-05 08:40:29] 2025-06-05 06:39:27,981 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:40:29] 2025-06-05 06:39:27,981 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:40:29] 2025-06-05 06:39:28,019 | INFO     | did not find any defunct processes belonging to 1250525
[2025-06-05 08:40:29] 2025-06-05 06:39:28,046 | INFO     | did not find any defunct processes belonging to 1250525
[2025-06-05 08:40:29] 2025-06-05 06:39:28,047 | INFO     | ready for new job
[2025-06-05 08:40:29] 2025-06-05 06:39:28,047 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:40:29] 2025-06-05 06:39:28,050 | INFO     | **************************************
[2025-06-05 08:40:29] 2025-06-05 06:39:28,050 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:40:29] 2025-06-05 06:39:28,050 | INFO     | **************************************
[2025-06-05 08:40:29] 2025-06-05 06:39:28,050 | INFO     | 
[2025-06-05 08:40:29] 2025-06-05 06:39:28,059 | INFO     | architecture information:
[2025-06-05 08:40:29] 2025-06-05 06:39:28,059 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:40:29] 2025-06-05 06:39:28,082 | INFO     | cat /etc/os-release:
[2025-06-05 08:40:29] NAME="CentOS Linux"
[2025-06-05 08:40:29] VERSION="7 (Core)"
[2025-06-05 08:40:29] ID="centos"
[2025-06-05 08:40:29] ID_LIKE="rhel fedora"
[2025-06-05 08:40:29] VERSION_ID="7"
[2025-06-05 08:40:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:40:29] ANSI_COLOR="0;31"
[2025-06-05 08:40:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:40:29] HOME_URL="https://www.centos.org/"
[2025-06-05 08:40:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:40:29] 
[2025-06-05 08:40:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:40:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:40:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:40:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:40:29] 
[2025-06-05 08:40:29] 2025-06-05 06:39:28,082 | INFO     | **************************************
[2025-06-05 08:40:29] 2025-06-05 06:39:28,584 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2025-06-05 08:40:29] 2025-06-05 06:39:28,609 | INFO     | sufficient remaining disk space (3265705017344 B)
[2025-06-05 08:40:29] 2025-06-05 06:39:28,610 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:40:29] 2025-06-05 06:39:28,610 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:40:29] 2025-06-05 06:39:28,610 | INFO     | update_server=False
[2025-06-05 08:40:29] 2025-06-05 06:39:28,610 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:40:29] 2025-06-05 06:39:28,611 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:40:29] 2025-06-05 06:39:28,611 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:40:29] 2025-06-05 06:39:28,611 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 08:40:29] 2025-06-05 06:39:28,612 | INFO     | aborting loop
[2025-06-05 08:40:29] 2025-06-05 06:39:28,612 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:40:29] 2025-06-05 06:39:28,613 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:40:29] 2025-06-05 06:39:28,613 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:40:29] 2025-06-05 06:39:29,140 | INFO     | all data control threads have been joined
[2025-06-05 08:40:29] 2025-06-05 06:39:29,145 | INFO     | all job control threads have been joined
[2025-06-05 08:40:29] 2025-06-05 06:39:29,230 | INFO     | all payload control threads have been joined
[2025-06-05 08:40:29] 2025-06-05 06:39:29,616 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:40:29] 2025-06-05 06:39:29,616 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:40:29] 2025-06-05 06:39:29,648 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:40:29] 2025-06-05 06:39:29,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:40:29] 2025-06-05 06:39:30,053 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:40:29] 2025-06-05 06:39:30,142 | INFO     | [data] control thread has finished
[2025-06-05 08:40:29] 2025-06-05 06:39:30,150 | INFO     | [job] control thread has finished
[2025-06-05 08:40:29] 2025-06-05 06:39:30,235 | INFO     | [payload] control thread has finished
[2025-06-05 08:40:29] 2025-06-05 06:39:30,358 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:40:29] 2025-06-05 06:39:30,561 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:40:29] 2025-06-05 06:39:30,562 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:40:29] 2025-06-05 06:39:30,957 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:40:29] 2025-06-05 06:39:31,013 | INFO     | [job] validate thread has finished
[2025-06-05 08:40:29] 2025-06-05 06:39:31,037 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:40:29] 2025-06-05 06:39:31,698 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:40:29] 2025-06-05 06:39:32,042 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:40:29] 2025-06-05 06:39:32,617 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:40:29] 2025-06-05 06:39:39,096 | INFO     | job.realtimelogging is not enabled
[2025-06-05 08:40:29] 2025-06-05 06:39:40,101 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:40:29] 2025-06-05 06:39:41,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22875880101696)>', '<ExcThread(monitor, started 22875631200000)>']
[2025-06-05 08:40:29] 2025-06-05 06:39:42,683 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:40:29] 2025-06-05 06:39:42,683 | INFO     | [monitor] control thread has ended
[2025-06-05 08:40:29] 2025-06-05 06:39:46,821 | INFO     | all workflow threads have been joined
[2025-06-05 08:40:29] 2025-06-05 06:39:46,821 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:40:29] 2025-06-05 06:39:46,821 | INFO     | traces error code: 0
[2025-06-05 08:40:29] 2025-06-05 06:39:46,822 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:40:29] 2025-06-05 06:39:46,974 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:40:29] 2025-06-05 06:39:46,978 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:40:29] 2025-06-05 06:39:46,982 [wrapper] pilotpid: 1230753
[2025-06-05 08:40:29] 2025-06-05 06:39:46,986 [wrapper] Pilot exit status: 0
[2025-06-05 08:40:29] 2025-06-05 06:39:47,000 [wrapper] pandaids: 6669238827
[2025-06-05 08:40:29] 2025-06-05 06:39:47,155 [wrapper] cleanup supervisor_pilot 1968025 1230754
[2025-06-05 08:40:29] 2025-06-05 06:39:47,162 [wrapper] Test setup, not cleaning
[2025-06-05 08:40:29] 2025-06-05 06:39:47,166 [wrapper] apfmon messages muted
[2025-06-05 08:40:29] 2025-06-05 06:39:47,170 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:40:29] 2025-06-05 06:39:47,174 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:40:29]  *** Error codes and diagnostics ***
[2025-06-05 08:40:29]     "exeErrorCode": 0,
[2025-06-05 08:40:29]     "exeErrorDiag": "",
[2025-06-05 08:40:29]     "pilotErrorCode": 0,
[2025-06-05 08:40:29]     "pilotErrorDiag": "",
[2025-06-05 08:40:29]  *** Listing of results directory ***
[2025-06-05 08:40:29] total 417396
[2025-06-05 08:40:29] -rw-r--r-- 1 boinc boinc    495897 May 29 06:58 pilot3.tar.gz
[2025-06-05 08:40:29] -rw-r--r-- 1 boinc boinc      5111 May 29 07:28 queuedata.json
[2025-06-05 08:40:29] -rwx------ 1 boinc boinc     37140 May 29 07:29 runpilot2-wrapper.sh
[2025-06-05 08:40:29] -rw-r--r-- 1 boinc boinc       100 Jun  5 05:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:40:29] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 05:08 run_atlas
[2025-06-05 08:40:29] -rw-r--r-- 1 boinc boinc       105 Jun  5 05:08 job.xml
[2025-06-05 08:40:29] -rw-r--r-- 2 boinc boinc 223771422 Jun  5 05:09 EVNT.44871834._003771.pool.root.1
[2025-06-05 08:40:29] -rw-r--r-- 1 boinc boinc      6685 Jun  5 05:09 init_data.xml
[2025-06-05 08:40:29] -rw-r--r-- 2 boinc boinc     15093 Jun  5 05:09 start_atlas.sh
[2025-06-05 08:40:29] drwxrwx--x 2 boinc boinc      4096 Jun  5 05:09 shared
[2025-06-05 08:40:29] -rw-r--r-- 2 boinc boinc    508877 Jun  5 05:09 input.tar.gz
[2025-06-05 08:40:29] -rw-r--r-- 1 boinc boinc         0 Jun  5 05:09 boinc_lockfile
[2025-06-05 08:40:29] -rw-r--r-- 1 boinc boinc      2559 Jun  5 05:09 pandaJob.out
[2025-06-05 08:40:29] -rw------- 1 boinc boinc    987109 Jun  5 05:09 agis_schedconf.cvmfs.json
[2025-06-05 08:40:29] drwx------ 4 boinc boinc      4096 Jun  5 05:09 pilot3
[2025-06-05 08:40:29] -rw------- 1 boinc boinc 196835991 Jun  5 08:38 HITS.44871837._095510.pool.root.1
[2025-06-05 08:40:29] -rw-r--r-- 1 boinc boinc       529 Jun  5 08:39 boinc_task_state.xml
[2025-06-05 08:40:29] -rw------- 1 boinc boinc        95 Jun  5 08:39 pilot_heartbeat.json
[2025-06-05 08:40:29] -rw------- 1 boinc boinc      1030 Jun  5 08:39 memory_monitor_summary.json
[2025-06-05 08:40:29] -rw------- 1 boinc boinc   1598969 Jun  5 08:39 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:40:29] -rw------- 1 boinc boinc    317776 Jun  5 08:39 log.44871837._095510.job.log.tgz.1
[2025-06-05 08:40:29] -rw------- 1 boinc boinc      7715 Jun  5 08:39 heartbeat.json
[2025-06-05 08:40:29] -rw------- 1 boinc boinc      4559 Jun  5 08:39 pilotlog.txt
[2025-06-05 08:40:29] -rw------- 1 boinc boinc   1168424 Jun  5 08:39 log.44871837._095510.job.log.1
[2025-06-05 08:40:29] -rw------- 1 boinc boinc       357 Jun  5 08:39 output.list
[2025-06-05 08:40:29] -rw-r--r-- 1 boinc boinc       620 Jun  5 08:39 runtime_log
[2025-06-05 08:40:29] -rw------- 1 boinc boinc   1505280 Jun  5 08:39 result.tar.gz
[2025-06-05 08:40:29] -rw-r--r-- 1 boinc boinc      9026 Jun  5 08:39 runtime_log.err
[2025-06-05 08:40:29] -rw------- 1 boinc boinc       666 Jun  5 08:39 dKlKDme0ke7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvrdKDmNFHvMn.diag
[2025-06-05 08:40:29] -rw-r--r-- 1 boinc boinc        27 Jun  5 08:40 wrapper_checkpoint.txt
[2025-06-05 08:40:29] -rw-r--r-- 1 boinc boinc      8192 Jun  5 08:40 boinc_mmap_file
[2025-06-05 08:40:29] -rw-r--r-- 1 boinc boinc     20658 Jun  5 08:40 stderr.txt
[2025-06-05 08:40:29] HITS file was successfully produced:
[2025-06-05 08:40:29] -rw------- 1 boinc boinc 196835991 Jun  5 08:38 shared/HITS.pool.root.1
[2025-06-05 08:40:29]  *** Contents of shared directory: ***
[2025-06-05 08:40:29] total 412748
[2025-06-05 08:40:29] -rw-r--r-- 2 boinc boinc 223771422 Jun  5 05:09 ATLAS.root_0
[2025-06-05 08:40:29] -rw-r--r-- 2 boinc boinc     15093 Jun  5 05:09 start_atlas.sh
[2025-06-05 08:40:29] -rw-r--r-- 2 boinc boinc    508877 Jun  5 05:09 input.tar.gz
[2025-06-05 08:40:29] -rw------- 1 boinc boinc 196835991 Jun  5 08:38 HITS.pool.root.1
[2025-06-05 08:40:29] -rw------- 1 boinc boinc   1505280 Jun  5 08:39 result.tar.gz
08:40:30 (1224297): run_atlas exited; CPU time 48218.330464
08:40:30 (1224297): called boinc_finish(0)

</stderr_txt>
]]>

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