Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:00:59 (24521): wrapper (7.7.26015): starting
08:00:59 (24521): wrapper: running run_atlas (--nthreads 8)
[2025-05-30 08:00:59] Arguments: --nthreads 8
[2025-05-30 08:00:59] Threads: 8
[2025-05-30 08:00:59] Checking for CVMFS
[2025-05-30 08:00:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 08:01:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 08:01:00] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 08:01:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 08:01:00] 2.11.2.0 22299 25620 91512 146588 2 114 12648690 25165825 4362 130560 0 14249345 99.758 15969252 1862 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-30 08:01:00] CVMFS is ok
[2025-05-30 08:01:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 08:01:00] Checking for apptainer binary...
[2025-05-30 08:01:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-30 08:01:01] Running /usr/bin/apptainer --version
[2025-05-30 08:01:01] apptainer version 1.3.2-1.el7
[2025-05-30 08:01:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 08:01:02] cg-vwn422.simple-grid.lan
[2025-05-30 08:01:02] apptainer works
[2025-05-30 08:01:02] Set ATHENA_PROC_NUMBER=8
[2025-05-30 08:01:02] Set ATHENA_CORE_NUMBER=8
[2025-05-30 08:01:02] Starting ATLAS job with PandaID=6669238432
[2025-05-30 08:01:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 13:11:56]  *** The last 200 lines of the pilot log: ***
[2025-05-30 13:11:56] 2025-05-30 11:10:58,510 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 13:11:56] 2025-05-30 11:10:58,510 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 13:11:56] 2025-05-30 11:10:58,511 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 13:11:56] 2025-05-30 11:10:58,511 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 13:11:56] 2025-05-30 11:10:58,517 | INFO     | fitting pss+swap vs Time
[2025-05-30 13:11:56] 2025-05-30 11:10:58,518 | INFO     | sum of square deviations: 8540720135.5
[2025-05-30 13:11:56] 2025-05-30 11:10:58,521 | INFO     | sum of deviations: 50272691951.0
[2025-05-30 13:11:56] 2025-05-30 11:10:58,521 | INFO     | mean x: 1748594129.5
[2025-05-30 13:11:56] 2025-05-30 11:10:58,521 | INFO     | mean y: 2472681.523178808
[2025-05-30 13:11:56] 2025-05-30 11:10:58,522 | INFO     | -- intersect: -10290164546.371912
[2025-05-30 13:11:56] 2025-05-30 11:10:58,522 | INFO     | intersect: -10290164546.371912
[2025-05-30 13:11:56] 2025-05-30 11:10:58,522 | INFO     | chi2: 2.282093085894095
[2025-05-30 13:11:56] 2025-05-30 11:10:58,523 | INFO     | sum of square deviations: 8123493708.0
[2025-05-30 13:11:56] 2025-05-30 11:10:58,526 | INFO     | sum of deviations: 69312633907.0
[2025-05-30 13:11:56] 2025-05-30 11:10:58,526 | INFO     | mean x: 1748593977.0
[2025-05-30 13:11:56] 2025-05-30 11:10:58,526 | INFO     | mean y: 2479542.3602693602
[2025-05-30 13:11:56] 2025-05-30 11:10:58,526 | INFO     | -- intersect: -14917166922.11954
[2025-05-30 13:11:56] 2025-05-30 11:10:58,526 | INFO     | intersect: -14917166922.11954
[2025-05-30 13:11:56] 2025-05-30 11:10:58,527 | INFO     | chi2: 1.5025975299737446
[2025-05-30 13:11:56] 2025-05-30 11:10:58,527 | INFO     | current chi2=1.5025975299737446 (change=34.15704472085345 %)
[2025-05-30 13:11:56] 2025-05-30 11:10:58,528 | INFO     | sum of square deviations: 7720081493.0
[2025-05-30 13:11:56] 2025-05-30 11:10:58,530 | INFO     | sum of deviations: 67961554880.500015
[2025-05-30 13:11:56] 2025-05-30 11:10:58,531 | INFO     | mean x: 1748593824.5
[2025-05-30 13:11:56] 2025-05-30 11:10:58,531 | INFO     | mean y: 2479031.571917808
[2025-05-30 13:11:56] 2025-05-30 11:10:58,531 | INFO     | -- intersect: -15390772357.705893
[2025-05-30 13:11:56] 2025-05-30 11:10:58,531 | INFO     | intersect: -15390772357.705893
[2025-05-30 13:11:56] 2025-05-30 11:10:58,532 | INFO     | chi2: 1.502548428792979
[2025-05-30 13:11:56] 2025-05-30 11:10:58,532 | INFO     | current chi2=1.502548428792979 (change=0.0032677533262409604 %)
[2025-05-30 13:11:56] 2025-05-30 11:10:58,532 | INFO     | right removable region: 291
[2025-05-30 13:11:56] 2025-05-30 11:10:58,532 | INFO     | sum of square deviations: 8123493708.0
[2025-05-30 13:11:56] 2025-05-30 11:10:58,535 | INFO     | sum of deviations: 2187556380.0
[2025-05-30 13:11:56] 2025-05-30 11:10:58,536 | INFO     | mean x: 1748594282.0
[2025-05-30 13:11:56] 2025-05-30 11:10:58,536 | INFO     | mean y: 2490135.8047138047
[2025-05-30 13:11:56] 2025-05-30 11:10:58,536 | INFO     | -- intersect: -468384676.8209944
[2025-05-30 13:11:56] 2025-05-30 11:10:58,536 | INFO     | intersect: -468384676.8209944
[2025-05-30 13:11:56] 2025-05-30 11:10:58,536 | INFO     | chi2: 0.8399251891773898
[2025-05-30 13:11:56] 2025-05-30 11:10:58,537 | INFO     | current chi2=0.8399251891773898 (change=63.19496367746464 %)
[2025-05-30 13:11:56] 2025-05-30 11:10:58,537 | INFO     | sum of square deviations: 7720081493.0
[2025-05-30 13:11:56] 2025-05-30 11:10:58,540 | INFO     | sum of deviations: -5786145544.999998
[2025-05-30 13:11:56] 2025-05-30 11:10:58,540 | INFO     | mean x: 1748594434.5
[2025-05-30 13:11:56] 2025-05-30 11:10:58,540 | INFO     | mean y: 2493126.0684931506
[2025-05-30 13:11:56] 2025-05-30 11:10:58,541 | INFO     | -- intersect: 1313052076.303394
[2025-05-30 13:11:56] 2025-05-30 11:10:58,541 | INFO     | intersect: 1313052076.303394
[2025-05-30 13:11:56] 2025-05-30 11:10:58,541 | INFO     | chi2: 0.7953772756738204
[2025-05-30 13:11:56] 2025-05-30 11:10:58,541 | INFO     | current chi2=0.7953772756738204 (change=5.30379539482545 %)
[2025-05-30 13:11:56] 2025-05-30 11:10:58,541 | INFO     | left removable region: 20
[2025-05-30 13:11:56] 2025-05-30 11:10:58,542 | INFO     | sum of square deviations: 6171352920.0
[2025-05-30 13:11:56] 2025-05-30 11:10:58,544 | INFO     | sum of deviations: 10764701354.0
[2025-05-30 13:11:56] 2025-05-30 11:10:58,544 | INFO     | mean x: 1748594404.0
[2025-05-30 13:11:56] 2025-05-30 11:10:58,545 | INFO     | mean y: 2501399.6088560885
[2025-05-30 13:11:56] 2025-05-30 11:10:58,545 | INFO     | -- intersect: -3047574781.796051
[2025-05-30 13:11:56] 2025-05-30 11:10:58,545 | INFO     | intersect: -3047574781.796051
[2025-05-30 13:11:56] 2025-05-30 11:10:58,545 | INFO     | chi2: 0.0021256056841370595
[2025-05-30 13:11:56] 2025-05-30 11:10:58,545 | INFO     | -- intersect: -3047574781.796051
[2025-05-30 13:11:56] 2025-05-30 11:10:58,545 | INFO     | current memory leak: 1.74 B/s (using 271 data points, chi2=0.00)
[2025-05-30 13:11:56] 2025-05-30 11:10:58,546 | INFO     | ..............................
[2025-05-30 13:11:56] 2025-05-30 11:10:58,546 | INFO     | . Timing measurements:
[2025-05-30 13:11:56] 2025-05-30 11:10:58,547 | INFO     | . get job = 0 s
[2025-05-30 13:11:56] 2025-05-30 11:10:58,547 | INFO     | . initial setup = 1 s
[2025-05-30 13:11:56] 2025-05-30 11:10:58,547 | INFO     | . payload setup = 15 s
[2025-05-30 13:11:56] 2025-05-30 11:10:58,547 | INFO     | . stage-in = 0 s
[2025-05-30 13:11:56] 2025-05-30 11:10:58,547 | INFO     | . payload execution = 18429 s
[2025-05-30 13:11:56] 2025-05-30 11:10:58,547 | INFO     | . stage-out = 3 s
[2025-05-30 13:11:56] 2025-05-30 11:10:58,547 | INFO     | . log creation = 1 s
[2025-05-30 13:11:56] 2025-05-30 11:10:58,547 | INFO     | ..............................
[2025-05-30 13:11:56] 2025-05-30 11:10:58,676 | INFO     | 
[2025-05-30 13:11:56] 2025-05-30 11:10:58,677 | INFO     | job summary report
[2025-05-30 13:11:56] 2025-05-30 11:10:58,677 | INFO     | --------------------------------------------------
[2025-05-30 13:11:56] 2025-05-30 11:10:58,677 | INFO     | PanDA job id: 6669238432
[2025-05-30 13:11:56] 2025-05-30 11:10:58,677 | INFO     | task id: 44871837
[2025-05-30 13:11:56] 2025-05-30 11:10:58,677 | INFO     | errors: (none)
[2025-05-30 13:11:56] 2025-05-30 11:10:58,677 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 13:11:56] 2025-05-30 11:10:58,677 | INFO     | pilot state: finished 
[2025-05-30 13:11:56] 2025-05-30 11:10:58,677 | INFO     | transexitcode: 0
[2025-05-30 13:11:56] 2025-05-30 11:10:58,677 | INFO     | exeerrorcode: 0
[2025-05-30 13:11:56] 2025-05-30 11:10:58,677 | INFO     | exeerrordiag: 
[2025-05-30 13:11:56] 2025-05-30 11:10:58,677 | INFO     | exitcode: 0
[2025-05-30 13:11:56] 2025-05-30 11:10:58,678 | INFO     | exitmsg: OK
[2025-05-30 13:11:56] 2025-05-30 11:10:58,678 | INFO     | cpuconsumptiontime: 71119 s
[2025-05-30 13:11:56] 2025-05-30 11:10:58,678 | INFO     | nevents: 400
[2025-05-30 13:11:56] 2025-05-30 11:10:58,678 | INFO     | neventsw: 0
[2025-05-30 13:11:56] 2025-05-30 11:10:58,678 | INFO     | pid: 2728
[2025-05-30 13:11:56] 2025-05-30 11:10:58,678 | INFO     | pgrp: 2728
[2025-05-30 13:11:56] 2025-05-30 11:10:58,678 | INFO     | corecount: 8
[2025-05-30 13:11:56] 2025-05-30 11:10:58,678 | INFO     | event service: False
[2025-05-30 13:11:56] 2025-05-30 11:10:58,678 | INFO     | sizes: {0: 2404406, 1: 2405262, 2: 2405262, 12: 2405524, 18449: 2437162, 18454: 2446103, 18456: 2446287, 18554: 2446457}
[2025-05-30 13:11:56] 2025-05-30 11:10:58,678 | INFO     | --------------------------------------------------
[2025-05-30 13:11:56] 2025-05-30 11:10:58,678 | INFO     | 
[2025-05-30 13:11:56] 2025-05-30 11:10:58,679 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-05-30 13:11:56] 2025-05-30 11:10:58,904 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 13:11:56] 2025-05-30 11:10:58,905 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 13:11:56] 2025-05-30 11:10:58,905 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 13:11:56] 2025-05-30 11:10:58,905 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 13:11:56] 2025-05-30 11:10:58,905 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 13:11:56] 2025-05-30 11:10:58,905 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 13:11:56] 2025-05-30 11:10:58,905 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 13:11:56] 2025-05-30 11:10:58,905 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 13:11:56] 2025-05-30 11:10:58,906 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 13:11:56] 2025-05-30 11:10:58,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 13:11:56] 2025-05-30 11:10:58,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 13:11:56] 2025-05-30 11:10:58,906 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 13:11:56] 2025-05-30 11:10:58,906 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 13:11:56] 2025-05-30 11:10:58,906 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 13:11:56] 2025-05-30 11:10:58,906 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 13:11:56] 2025-05-30 11:10:58,906 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 13:11:56] 2025-05-30 11:10:58,906 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 13:11:56] 2025-05-30 11:10:58,907 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 13:11:56] 2025-05-30 11:10:58,907 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 13:11:56] 2025-05-30 11:10:58,907 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 13:11:56] 2025-05-30 11:10:58,907 | INFO     | job 6669238432 has completed (purged errors)
[2025-05-30 13:11:56] 2025-05-30 11:10:58,907 | INFO     | overall cleanup function is called
[2025-05-30 13:11:56] 2025-05-30 11:10:59,916 | INFO     | --- collectZombieJob: --- 10, [2728]
[2025-05-30 13:11:56] 2025-05-30 11:10:59,916 | INFO     | zombie collector waiting for pid 2728
[2025-05-30 13:11:56] 2025-05-30 11:10:59,916 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 13:11:56] 2025-05-30 11:10:59,916 | INFO     | collected zombie processes
[2025-05-30 13:11:56] 2025-05-30 11:10:59,917 | INFO     | will attempt to kill all subprocesses of pid=2728
[2025-05-30 13:11:56] 2025-05-30 11:11:00,083 | INFO     | process IDs to be killed: [2728] (in reverse order)
[2025-05-30 13:11:56] 2025-05-30 11:11:00,581 | INFO     | PID=28544 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-05-30 13:11:56] 2025-05-30 11:11:00,582 | INFO     | .. there are 9 such processes running
[2025-05-30 13:11:56] 2025-05-30 11:11:01,168 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 13:11:56] 2025-05-30 11:11:01,169 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 13:11:56] 2025-05-30 11:11:01,172 | INFO     | did not find any defunct processes belonging to 2728
[2025-05-30 13:11:56] 2025-05-30 11:11:01,175 | INFO     | did not find any defunct processes belonging to 2728
[2025-05-30 13:11:56] 2025-05-30 11:11:01,175 | INFO     | ready for new job
[2025-05-30 13:11:56] 2025-05-30 11:11:01,175 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 13:11:56] 2025-05-30 11:11:01,177 | INFO     | **************************************
[2025-05-30 13:11:56] 2025-05-30 11:11:01,177 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 13:11:56] 2025-05-30 11:11:01,178 | INFO     | **************************************
[2025-05-30 13:11:56] 2025-05-30 11:11:01,178 | INFO     | 
[2025-05-30 13:11:56] 2025-05-30 11:11:01,178 | INFO     | pilot is running in a VM
[2025-05-30 13:11:56] 2025-05-30 11:11:01,178 | INFO     | architecture information:
[2025-05-30 13:11:56] 2025-05-30 11:11:01,188 | INFO     | executing command: cat /etc/os-release
[2025-05-30 13:11:56] 2025-05-30 11:11:01,480 | INFO     | cat /etc/os-release:
[2025-05-30 13:11:56] NAME="CentOS Linux"
[2025-05-30 13:11:56] VERSION="7 (Core)"
[2025-05-30 13:11:56] ID="centos"
[2025-05-30 13:11:56] ID_LIKE="rhel fedora"
[2025-05-30 13:11:56] VERSION_ID="7"
[2025-05-30 13:11:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 13:11:56] ANSI_COLOR="0;31"
[2025-05-30 13:11:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 13:11:56] HOME_URL="https://www.centos.org/"
[2025-05-30 13:11:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 13:11:56] 
[2025-05-30 13:11:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 13:11:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 13:11:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 13:11:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 13:11:56] 
[2025-05-30 13:11:56] 2025-05-30 11:11:01,481 | INFO     | **************************************
[2025-05-30 13:11:56] 2025-05-30 11:11:01,983 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-05-30 13:11:56] 2025-05-30 11:11:02,177 | INFO     | sufficient remaining disk space (496178823168 B)
[2025-05-30 13:11:56] 2025-05-30 11:11:02,177 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 13:11:56] 2025-05-30 11:11:02,177 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 13:11:56] 2025-05-30 11:11:02,177 | INFO     | update_server=False
[2025-05-30 13:11:56] 2025-05-30 11:11:02,178 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 13:11:56] 2025-05-30 11:11:02,178 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 13:11:56] 2025-05-30 11:11:02,527 | INFO     | all data control threads have been joined
[2025-05-30 13:11:56] 2025-05-30 11:11:02,589 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 13:11:56] 2025-05-30 11:11:02,589 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 13:11:56] 2025-05-30 11:11:02,589 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 13:11:56] 2025-05-30 11:11:02,634 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 13:11:56] 2025-05-30 11:11:02,634 | INFO     | aborting loop
[2025-05-30 13:11:56] 2025-05-30 11:11:02,822 | INFO     | all payload control threads have been joined
[2025-05-30 13:11:56] 2025-05-30 11:11:03,184 | INFO     | [job] retrieve thread has finished
[2025-05-30 13:11:56] 2025-05-30 11:11:03,521 | INFO     | [payload] failed_post thread has finished
[2025-05-30 13:11:56] 2025-05-30 11:11:03,533 | INFO     | [data] control thread has finished
[2025-05-30 13:11:56] 2025-05-30 11:11:03,552 | INFO     | all job control threads have been joined
[2025-05-30 13:11:56] 2025-05-30 11:11:03,640 | INFO     | [job] job monitor thread has finished
[2025-05-30 13:11:56] 2025-05-30 11:11:03,690 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 13:11:56] 2025-05-30 11:11:03,828 | INFO     | [payload] control thread has finished
[2025-05-30 13:11:56] 2025-05-30 11:11:03,959 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 13:11:56] 2025-05-30 11:11:03,967 | INFO     | [job] validate thread has finished
[2025-05-30 13:11:56] 2025-05-30 11:11:04,156 | INFO     | [payload] validate_post thread has finished
[2025-05-30 13:11:56] 2025-05-30 11:11:04,185 | INFO     | [data] copytool_out thread has finished
[2025-05-30 13:11:56] 2025-05-30 11:11:04,235 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 13:11:56] 2025-05-30 11:11:04,403 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 13:11:56] 2025-05-30 11:11:04,410 | INFO     | [data] copytool_in thread has finished
[2025-05-30 13:11:56] 2025-05-30 11:11:04,480 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 13:11:56] 2025-05-30 11:11:04,558 | INFO     | [job] control thread has finished
[2025-05-30 13:11:56] 2025-05-30 11:11:04,696 | INFO     | [job] queue monitor thread has finished
[2025-05-30 13:11:56] 2025-05-30 11:11:05,509 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 13:11:56] 2025-05-30 11:11:09,520 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 13:11:56] 2025-05-30 11:11:10,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140487547729728)>', '<ExcThread(monitor, started 140486970963712)>']
[2025-05-30 13:11:56] 2025-05-30 11:11:10,634 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 13:11:56] 2025-05-30 11:11:10,634 | INFO     | [monitor] control thread has ended
[2025-05-30 13:11:56] 2025-05-30 11:11:15,334 | INFO     | all workflow threads have been joined
[2025-05-30 13:11:56] 2025-05-30 11:11:15,334 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 13:11:56] 2025-05-30 11:11:15,334 | INFO     | traces error code: 0
[2025-05-30 13:11:56] 2025-05-30 11:11:15,335 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 13:11:56] 2025-05-30 11:11:15,546 [wrapper] ==== pilot stdout END ====
[2025-05-30 13:11:56] 2025-05-30 11:11:15,549 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 13:11:56] 2025-05-30 11:11:15,557 [wrapper] pilotpid: 28544
[2025-05-30 13:11:56] 2025-05-30 11:11:15,560 [wrapper] Pilot exit status: 0
[2025-05-30 13:11:56] 2025-05-30 11:11:15,579 [wrapper] pandaids: 6669238432
[2025-05-30 13:11:56] 2025-05-30 11:11:15,621 [wrapper] cleanup supervisor_pilot 20090 28545
[2025-05-30 13:11:56] 2025-05-30 11:11:15,629 [wrapper] Test setup, not cleaning
[2025-05-30 13:11:56] 2025-05-30 11:11:15,632 [wrapper] apfmon messages muted
[2025-05-30 13:11:56] 2025-05-30 11:11:15,636 [wrapper] ==== wrapper stdout END ====
[2025-05-30 13:11:56] 2025-05-30 11:11:15,648 [wrapper] ==== wrapper stderr END ====
[2025-05-30 13:11:56]  *** Error codes and diagnostics ***
[2025-05-30 13:11:56]     "exeErrorCode": 0,
[2025-05-30 13:11:56]     "exeErrorDiag": "",
[2025-05-30 13:11:56]     "pilotErrorCode": 0,
[2025-05-30 13:11:56]     "pilotErrorDiag": "",
[2025-05-30 13:11:56]  *** Listing of results directory ***
[2025-05-30 13:11:56] total 413672
[2025-05-30 13:11:56] -rw-r--r--. 1 boinc boinc    495897 May 29 06:11 pilot3.tar.gz
[2025-05-30 13:11:56] -rw-r--r--. 1 boinc boinc      5111 May 29 06:47 queuedata.json
[2025-05-30 13:11:56] -rwx------. 1 boinc boinc     37140 May 29 06:48 runpilot2-wrapper.sh
[2025-05-30 13:11:56] -rw-r--r--. 1 boinc boinc       100 May 30 08:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 13:11:56] -rwxr-xr-x. 1 boinc boinc      7986 May 30 08:00 run_atlas
[2025-05-30 13:11:56] -rw-r--r--. 1 boinc boinc       105 May 30 08:00 job.xml
[2025-05-30 13:11:56] -rw-r--r--. 1 boinc boinc      6371 May 30 08:00 init_data.xml
[2025-05-30 13:11:56] -rw-r--r--. 2 boinc boinc 222712458 May 30 08:00 EVNT.44871834._003738.pool.root.1
[2025-05-30 13:11:56] -rw-r--r--. 2 boinc boinc     15093 May 30 08:00 start_atlas.sh
[2025-05-30 13:11:56] drwxrwx--x. 2 boinc boinc        68 May 30 08:00 shared
[2025-05-30 13:11:56] -rw-r--r--. 2 boinc boinc    508881 May 30 08:00 input.tar.gz
[2025-05-30 13:11:56] -rw-r--r--. 1 boinc boinc         0 May 30 08:00 boinc_lockfile
[2025-05-30 13:11:56] -rw-r--r--. 1 boinc boinc      2559 May 30 08:01 pandaJob.out
[2025-05-30 13:11:56] -rw-------. 1 boinc boinc    992366 May 30 08:01 agis_schedconf.cvmfs.json
[2025-05-30 13:11:56] drwx------. 4 boinc boinc      4096 May 30 08:01 pilot3
[2025-05-30 13:11:56] -rw-------. 1 boinc boinc 193023984 May 30 13:07 HITS.44871837._095195.pool.root.1
[2025-05-30 13:11:56] -rw-r--r--. 1 boinc boinc       531 May 30 13:07 boinc_task_state.xml
[2025-05-30 13:11:56] -rw-------. 1 boinc boinc      1015 May 30 13:09 memory_monitor_summary.json
[2025-05-30 13:11:56] -rw-------. 1 boinc boinc   1603667 May 30 13:09 agis_ddmendpoints.agis.ALL.json
[2025-05-30 13:11:56] -rw-------. 1 boinc boinc    431837 May 30 13:09 log.44871837._095195.job.log.tgz.1
[2025-05-30 13:11:56] -rw-------. 1 boinc boinc        95 May 30 13:10 pilot_heartbeat.json
[2025-05-30 13:11:56] -rw-------. 1 boinc boinc      7689 May 30 13:10 heartbeat.json
[2025-05-30 13:11:56] -rw-------. 1 boinc boinc      4416 May 30 13:11 pilotlog.txt
[2025-05-30 13:11:56] -rw-------. 1 boinc boinc   1582036 May 30 13:11 log.44871837._095195.job.log.1
[2025-05-30 13:11:56] -rw-------. 1 boinc boinc       357 May 30 13:11 output.list
[2025-05-30 13:11:56] -rw-r--r--. 1 boinc boinc       620 May 30 13:11 runtime_log
[2025-05-30 13:11:56] -rw-------. 1 boinc boinc   2037760 May 30 13:11 result.tar.gz
[2025-05-30 13:11:56] -rw-r--r--. 1 boinc boinc      8659 May 30 13:11 runtime_log.err
[2025-05-30 13:11:56] -rw-------. 1 boinc boinc       657 May 30 13:11 8xIMDmcMke7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrndKDm6iKAOo.diag
[2025-05-30 13:11:56] -rw-r--r--. 1 boinc boinc      8192 May 30 13:11 boinc_mmap_file
[2025-05-30 13:11:56] -rw-r--r--. 1 boinc boinc        28 May 30 13:11 wrapper_checkpoint.txt
[2025-05-30 13:11:56] -rw-r--r--. 1 boinc boinc     20534 May 30 13:11 stderr.txt
[2025-05-30 13:11:56] HITS file was successfully produced:
[2025-05-30 13:11:56] -rw-------. 1 boinc boinc 193023984 May 30 13:07 shared/HITS.pool.root.1
[2025-05-30 13:11:56]  *** Contents of shared directory: ***
[2025-05-30 13:11:56] total 408504
[2025-05-30 13:11:56] -rw-r--r--. 2 boinc boinc 222712458 May 30 08:00 ATLAS.root_0
[2025-05-30 13:11:56] -rw-r--r--. 2 boinc boinc     15093 May 30 08:00 start_atlas.sh
[2025-05-30 13:11:56] -rw-r--r--. 2 boinc boinc    508881 May 30 08:00 input.tar.gz
[2025-05-30 13:11:56] -rw-------. 1 boinc boinc 193023984 May 30 13:07 HITS.pool.root.1
[2025-05-30 13:11:56] -rw-------. 1 boinc boinc   2037760 May 30 13:11 result.tar.gz
13:11:58 (24521): run_atlas exited; CPU time 71354.852174
13:11:58 (24521): called boinc_finish(0)

</stderr_txt>
]]>

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