Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:56:57 (1711797): wrapper (7.7.26015): starting
08:56:57 (1711797): wrapper: running run_atlas (--nthreads 9)
[2025-05-29 08:56:57] Arguments: --nthreads 9
[2025-05-29 08:56:57] Threads: 9
[2025-05-29 08:56:57] Checking for CVMFS
[2025-05-29 08:56:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 08:56:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 08:56:57] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 08:56:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 08:56:57] 2.12.6.0 34032 22828 310692 146562 0 304 23204674 29414401 12519 16776704 0 65262036 99.453 91238947 32320 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-29 08:56:57] CVMFS is ok
[2025-05-29 08:56:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-29 08:56:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-29 08:56:57] Further information can be found at the LHC@home message board.
[2025-05-29 08:56:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 08:56:57] Checking for apptainer binary...
[2025-05-29 08:56:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 08:56:57] Running /usr/bin/apptainer --version
[2025-05-29 08:56:57] apptainer version 1.4.1-1.el9
[2025-05-29 08:56:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 08:56:57] c6-5-37-4.aglt2.org
[2025-05-29 08:56:57] apptainer works
[2025-05-29 08:56:57] Set ATHENA_PROC_NUMBER=9
[2025-05-29 08:56:57] Set ATHENA_CORE_NUMBER=9
[2025-05-29 08:56:57] Starting ATLAS job with PandaID=6669238354
[2025-05-29 08:56:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 13:42:37]  *** The last 200 lines of the pilot log: ***
[2025-05-29 13:42:37] 2025-05-29 16:42:58,229 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-05-29 13:42:37] 2025-05-29 16:42:58,761 | INFO     | PID=1715533 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-29 13:42:37] 2025-05-29 16:42:58,761 | INFO     | .. there are 16 such processes running
[2025-05-29 13:42:37] 2025-05-29 16:42:59,786 | INFO     | monitor loop #849: job 0:6669238354 is in state 'finished'
[2025-05-29 13:42:37] 2025-05-29 16:42:59,786 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 13:42:37] 2025-05-29 16:43:02,291 | INFO     | monitor loop #850: job 0:6669238354 is in state 'finished'
[2025-05-29 13:42:37] 2025-05-29 16:43:02,291 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-29 13:42:37] 2025-05-29 16:43:03,801 | INFO     | CPU arch script returned: x86-64-v4
[2025-05-29 13:42:37] 2025-05-29 16:43:03,802 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6669238354/memory_monitor_summary.json (trf name=prmon)
[2025-05-29 13:42:37] 2025-05-29 16:43:03,803 | INFO     | extracted standard info from prmon json
[2025-05-29 13:42:37] 2025-05-29 16:43:03,803 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 13:42:37] 2025-05-29 16:43:03,803 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 13:42:37] 2025-05-29 16:43:03,803 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 13:42:37] 2025-05-29 16:43:03,803 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 13:42:37] 2025-05-29 16:43:03,807 | INFO     | fitting pss+swap vs Time
[2025-05-29 13:42:37] 2025-05-29 16:43:03,808 | INFO     | sum of square deviations: 3392532601.3198414
[2025-05-29 13:42:37] 2025-05-29 16:43:03,809 | INFO     | sum of deviations: -10153945079.914415
[2025-05-29 13:42:37] 2025-05-29 16:43:03,809 | INFO     | mean x: 1748530195.2657657
[2025-05-29 13:42:37] 2025-05-29 16:43:03,809 | INFO     | mean y: 2242222.761261261
[2025-05-29 13:42:37] 2025-05-29 16:43:03,809 | INFO     | -- intersect: 5235642062.866956
[2025-05-29 13:42:37] 2025-05-29 16:43:03,809 | INFO     | intersect: 5235642062.866956
[2025-05-29 13:42:37] 2025-05-29 16:43:03,809 | INFO     | chi2: 1.7366745992313055
[2025-05-29 13:42:37] 2025-05-29 16:43:03,810 | INFO     | sum of square deviations: 3168477920.820285
[2025-05-29 13:42:37] 2025-05-29 16:43:03,811 | INFO     | sum of deviations: -8768876583.30877
[2025-05-29 13:42:37] 2025-05-29 16:43:03,811 | INFO     | mean x: 1748530042.78341
[2025-05-29 13:42:37] 2025-05-29 16:43:03,811 | INFO     | mean y: 2243150.525345622
[2025-05-29 13:42:37] 2025-05-29 16:43:03,811 | INFO     | -- intersect: 4841362920.501799
[2025-05-29 13:42:37] 2025-05-29 16:43:03,811 | INFO     | intersect: 4841362920.501799
[2025-05-29 13:42:37] 2025-05-29 16:43:03,812 | INFO     | chi2: 1.7349689209459553
[2025-05-29 13:42:37] 2025-05-29 16:43:03,812 | INFO     | current chi2=1.7349689209459553 (change=0.09821519161420054 %)
[2025-05-29 13:42:37] 2025-05-29 16:43:03,812 | INFO     | right removable region: 216
[2025-05-29 13:42:37] 2025-05-29 16:43:03,812 | INFO     | sum of square deviations: 3168374220.820285
[2025-05-29 13:42:37] 2025-05-29 16:43:03,813 | INFO     | sum of deviations: -37695909575.79723
[2025-05-29 13:42:37] 2025-05-29 16:43:03,813 | INFO     | mean x: 1748530347.78341
[2025-05-29 13:42:37] 2025-05-29 16:43:03,813 | INFO     | mean y: 2260752.8341013826
[2025-05-29 13:42:37] 2025-05-29 16:43:03,813 | INFO     | -- intersect: 20805498403.062218
[2025-05-29 13:42:37] 2025-05-29 16:43:03,814 | INFO     | intersect: 20805498403.062218
[2025-05-29 13:42:37] 2025-05-29 16:43:03,814 | INFO     | chi2: 0.3875808356364695
[2025-05-29 13:42:37] 2025-05-29 16:43:03,814 | INFO     | current chi2=0.3875808356364695 (change=77.68258741113493 %)
[2025-05-29 13:42:37] 2025-05-29 16:43:03,814 | INFO     | sum of square deviations: 2954309052.679257
[2025-05-29 13:42:37] 2025-05-29 16:43:03,815 | INFO     | sum of deviations: -27201962191.05662
[2025-05-29 13:42:37] 2025-05-29 16:43:03,815 | INFO     | mean x: 1748530500.3018868
[2025-05-29 13:42:37] 2025-05-29 16:43:03,816 | INFO     | mean y: 2253265.1415094337
[2025-05-29 13:42:37] 2025-05-29 16:43:03,816 | INFO     | -- intersect: 16101943484.073088
[2025-05-29 13:42:37] 2025-05-29 16:43:03,816 | INFO     | intersect: 16101943484.073088
[2025-05-29 13:42:37] 2025-05-29 16:43:03,816 | INFO     | chi2: 0.3321678469476018
[2025-05-29 13:42:37] 2025-05-29 16:43:03,816 | INFO     | current chi2=0.3321678469476018 (change=14.297143613375704 %)
[2025-05-29 13:42:37] 2025-05-29 16:43:03,816 | INFO     | left removable region: 20
[2025-05-29 13:42:37] 2025-05-29 16:43:03,816 | INFO     | sum of square deviations: 2334555081.2806067
[2025-05-29 13:42:37] 2025-05-29 16:43:03,817 | INFO     | sum of deviations: -3086945732.9285674
[2025-05-29 13:42:37] 2025-05-29 16:43:03,817 | INFO     | mean x: 1748530622.3622448
[2025-05-29 13:42:37] 2025-05-29 16:43:03,818 | INFO     | mean y: 2236170.9285714286
[2025-05-29 13:42:37] 2025-05-29 16:43:03,818 | INFO     | -- intersect: 2314290911.841016
[2025-05-29 13:42:37] 2025-05-29 16:43:03,818 | INFO     | intersect: 2314290911.841016
[2025-05-29 13:42:37] 2025-05-29 16:43:03,818 | INFO     | chi2: 0.12218943783483213
[2025-05-29 13:42:37] 2025-05-29 16:43:03,818 | INFO     | -- intersect: 2314290911.841016
[2025-05-29 13:42:37] 2025-05-29 16:43:03,818 | INFO     | current memory leak: -1.32 B/s (using 196 data points, chi2=0.12)
[2025-05-29 13:42:37] 2025-05-29 16:43:03,819 | INFO     | ..............................
[2025-05-29 13:42:37] 2025-05-29 16:43:03,819 | INFO     | . Timing measurements:
[2025-05-29 13:42:37] 2025-05-29 16:43:03,819 | INFO     | . get job = 0 s
[2025-05-29 13:42:37] 2025-05-29 16:43:03,819 | INFO     | . initial setup = 2 s
[2025-05-29 13:42:37] 2025-05-29 16:43:03,819 | INFO     | . payload setup = 6 s
[2025-05-29 13:42:37] 2025-05-29 16:43:03,819 | INFO     | . stage-in = 0 s
[2025-05-29 13:42:37] 2025-05-29 16:43:03,819 | INFO     | . payload execution = 13519 s
[2025-05-29 13:42:37] 2025-05-29 16:43:03,819 | INFO     | . stage-out = 2 s
[2025-05-29 13:42:37] 2025-05-29 16:43:03,819 | INFO     | . log creation = 0 s
[2025-05-29 13:42:37] 2025-05-29 16:43:03,819 | INFO     | ..............................
[2025-05-29 13:42:37] 2025-05-29 16:43:03,906 | INFO     | 
[2025-05-29 13:42:37] 2025-05-29 16:43:03,906 | INFO     | job summary report
[2025-05-29 13:42:37] 2025-05-29 16:43:03,906 | INFO     | --------------------------------------------------
[2025-05-29 13:42:37] 2025-05-29 16:43:03,906 | INFO     | PanDA job id: 6669238354
[2025-05-29 13:42:37] 2025-05-29 16:43:03,906 | INFO     | task id: 44871837
[2025-05-29 13:42:37] 2025-05-29 16:43:03,906 | INFO     | errors: (none)
[2025-05-29 13:42:37] 2025-05-29 16:43:03,906 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 13:42:37] 2025-05-29 16:43:03,906 | INFO     | pilot state: finished 
[2025-05-29 13:42:37] 2025-05-29 16:43:03,906 | INFO     | transexitcode: 0
[2025-05-29 13:42:37] 2025-05-29 16:43:03,906 | INFO     | exeerrorcode: 0
[2025-05-29 13:42:37] 2025-05-29 16:43:03,906 | INFO     | exeerrordiag: 
[2025-05-29 13:42:37] 2025-05-29 16:43:03,906 | INFO     | exitcode: 0
[2025-05-29 13:42:37] 2025-05-29 16:43:03,906 | INFO     | exitmsg: OK
[2025-05-29 13:42:37] 2025-05-29 16:43:03,907 | INFO     | cpuconsumptiontime: 51270 s
[2025-05-29 13:42:37] 2025-05-29 16:43:03,907 | INFO     | nevents: 400
[2025-05-29 13:42:37] 2025-05-29 16:43:03,907 | INFO     | neventsw: 0
[2025-05-29 13:42:37] 2025-05-29 16:43:03,907 | INFO     | pid: 1727322
[2025-05-29 13:42:37] 2025-05-29 16:43:03,907 | INFO     | pgrp: 1727322
[2025-05-29 13:42:37] 2025-05-29 16:43:03,907 | INFO     | corecount: 9
[2025-05-29 13:42:37] 2025-05-29 16:43:03,907 | INFO     | event service: False
[2025-05-29 13:42:37] 2025-05-29 16:43:03,907 | INFO     | sizes: {0: 2405063, 1: 2405262, 5: 2405468, 11: 2405524, 13529: 2435446, 13533: 2444387, 13535: 2444571, 13541: 2444741}
[2025-05-29 13:42:37] 2025-05-29 16:43:03,907 | INFO     | --------------------------------------------------
[2025-05-29 13:42:37] 2025-05-29 16:43:03,907 | INFO     | 
[2025-05-29 13:42:37] 2025-05-29 16:43:03,907 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-05-29 13:42:37] 2025-05-29 16:43:03,932 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 13:42:37] 2025-05-29 16:43:03,932 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 13:42:37] 2025-05-29 16:43:03,932 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 13:42:37] 2025-05-29 16:43:03,932 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 13:42:37] 2025-05-29 16:43:03,932 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 13:42:37] 2025-05-29 16:43:03,933 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 13:42:37] 2025-05-29 16:43:03,933 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 13:42:37] 2025-05-29 16:43:03,933 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 13:42:37] 2025-05-29 16:43:03,933 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 13:42:37] 2025-05-29 16:43:03,933 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 13:42:37] 2025-05-29 16:43:03,933 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 13:42:37] 2025-05-29 16:43:03,933 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 13:42:37] 2025-05-29 16:43:03,933 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 13:42:37] 2025-05-29 16:43:03,933 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 13:42:37] 2025-05-29 16:43:03,933 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 13:42:37] 2025-05-29 16:43:03,933 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 13:42:37] 2025-05-29 16:43:03,933 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 13:42:37] 2025-05-29 16:43:03,933 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 13:42:37] 2025-05-29 16:43:03,933 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 13:42:37] 2025-05-29 16:43:03,934 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 13:42:37] 2025-05-29 16:43:03,934 | INFO     | job 6669238354 has completed (purged errors)
[2025-05-29 13:42:37] 2025-05-29 16:43:03,934 | INFO     | overall cleanup function is called
[2025-05-29 13:42:37] 2025-05-29 16:43:04,955 | INFO     | --- collectZombieJob: --- 10, [1727322]
[2025-05-29 13:42:37] 2025-05-29 16:43:04,955 | INFO     | zombie collector waiting for pid 1727322
[2025-05-29 13:42:37] 2025-05-29 16:43:04,955 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 13:42:37] 2025-05-29 16:43:04,955 | INFO     | collected zombie processes
[2025-05-29 13:42:37] 2025-05-29 16:43:04,955 | INFO     | will attempt to kill all subprocesses of pid=1727322
[2025-05-29 13:42:37] 2025-05-29 16:43:05,173 | INFO     | process IDs to be killed: [1727322] (in reverse order)
[2025-05-29 13:42:37] 2025-05-29 16:43:05,259 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 13:42:37] 2025-05-29 16:43:05,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 13:42:37] 2025-05-29 16:43:05,269 | INFO     | did not find any defunct processes belonging to 1727322
[2025-05-29 13:42:37] 2025-05-29 16:43:05,279 | INFO     | did not find any defunct processes belonging to 1727322
[2025-05-29 13:42:37] 2025-05-29 16:43:05,279 | INFO     | ready for new job
[2025-05-29 13:42:37] 2025-05-29 16:43:05,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 13:42:37] 2025-05-29 16:43:05,282 | INFO     | **************************************
[2025-05-29 13:42:37] 2025-05-29 16:43:05,282 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 13:42:37] 2025-05-29 16:43:05,282 | INFO     | **************************************
[2025-05-29 13:42:37] 2025-05-29 16:43:05,282 | INFO     | 
[2025-05-29 13:42:37] 2025-05-29 16:43:05,298 | INFO     | architecture information:
[2025-05-29 13:42:37] 2025-05-29 16:43:05,298 | INFO     | executing command: cat /etc/os-release
[2025-05-29 13:42:37] 2025-05-29 16:43:05,316 | INFO     | cat /etc/os-release:
[2025-05-29 13:42:37] NAME="CentOS Linux"
[2025-05-29 13:42:37] VERSION="7 (Core)"
[2025-05-29 13:42:37] ID="centos"
[2025-05-29 13:42:37] ID_LIKE="rhel fedora"
[2025-05-29 13:42:37] VERSION_ID="7"
[2025-05-29 13:42:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 13:42:37] ANSI_COLOR="0;31"
[2025-05-29 13:42:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 13:42:37] HOME_URL="https://www.centos.org/"
[2025-05-29 13:42:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 13:42:37] 
[2025-05-29 13:42:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 13:42:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 13:42:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 13:42:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 13:42:37] 
[2025-05-29 13:42:37] 2025-05-29 16:43:05,316 | INFO     | **************************************
[2025-05-29 13:42:37] 2025-05-29 16:43:05,819 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-05-29 13:42:37] 2025-05-29 16:43:05,837 | INFO     | sufficient remaining disk space (74178363392 B)
[2025-05-29 13:42:37] 2025-05-29 16:43:05,838 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 13:42:37] 2025-05-29 16:43:05,838 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 13:42:37] 2025-05-29 16:43:05,838 | INFO     | update_server=False
[2025-05-29 13:42:37] 2025-05-29 16:43:05,838 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 13:42:37] 2025-05-29 16:43:05,839 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 13:42:37] 2025-05-29 16:43:05,839 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 13:42:37] 2025-05-29 16:43:05,839 | INFO     | aborting loop
[2025-05-29 13:42:37] 2025-05-29 16:43:06,556 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 13:42:37] 2025-05-29 16:43:06,583 | INFO     | all data control threads have been joined
[2025-05-29 13:42:37] 2025-05-29 16:43:06,809 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 13:42:37] 2025-05-29 16:43:06,809 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 13:42:37] 2025-05-29 16:43:06,809 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 13:42:37] 2025-05-29 16:43:06,844 | INFO     | [job] retrieve thread has finished
[2025-05-29 13:42:37] 2025-05-29 16:43:06,845 | INFO     | [job] queue monitor thread has finished
[2025-05-29 13:42:37] 2025-05-29 16:43:06,852 | INFO     | [job] job monitor thread has finished
[2025-05-29 13:42:37] 2025-05-29 16:43:06,866 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 13:42:37] 2025-05-29 16:43:07,165 | INFO     | all payload control threads have been joined
[2025-05-29 13:42:37] 2025-05-29 16:43:07,425 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 13:42:37] 2025-05-29 16:43:07,440 | INFO     | [payload] failed_post thread has finished
[2025-05-29 13:42:37] 2025-05-29 16:43:07,588 | INFO     | [data] control thread has finished
[2025-05-29 13:42:37] 2025-05-29 16:43:07,602 | INFO     | all job control threads have been joined
[2025-05-29 13:42:37] 2025-05-29 16:43:07,688 | INFO     | [data] copytool_in thread has finished
[2025-05-29 13:42:37] 2025-05-29 16:43:07,795 | INFO     | [payload] validate_post thread has finished
[2025-05-29 13:42:37] 2025-05-29 16:43:07,874 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 13:42:37] 2025-05-29 16:43:08,007 | INFO     | [job] validate thread has finished
[2025-05-29 13:42:37] 2025-05-29 16:43:08,171 | INFO     | [payload] control thread has finished
[2025-05-29 13:42:37] 2025-05-29 16:43:08,563 | INFO     | [data] copytool_out thread has finished
[2025-05-29 13:42:37] 2025-05-29 16:43:08,609 | INFO     | [job] control thread has finished
[2025-05-29 13:42:37] 2025-05-29 16:43:08,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 13:42:37] 2025-05-29 16:43:12,625 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 13:42:37] 2025-05-29 16:43:15,890 | INFO     | job.realtimelogging is not enabled
[2025-05-29 13:42:37] 2025-05-29 16:43:16,896 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 13:42:37] 2025-05-29 16:43:17,882 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140033489131328)>', '<ExcThread(monitor, started 140032702670592)>']
[2025-05-29 13:42:37] 2025-05-29 16:43:18,879 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 13:42:37] 2025-05-29 16:43:18,879 | INFO     | [monitor] control thread has ended
[2025-05-29 13:42:37] 2025-05-29 16:43:22,909 | INFO     | all workflow threads have been joined
[2025-05-29 13:42:37] 2025-05-29 16:43:22,909 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 13:42:37] 2025-05-29 16:43:22,909 | INFO     | traces error code: 0
[2025-05-29 13:42:37] 2025-05-29 16:43:22,909 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 13:42:37] 2025-05-29 16:43:23,099 [wrapper] ==== pilot stdout END ====
[2025-05-29 13:42:37] 2025-05-29 16:43:23,102 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 13:42:37] 2025-05-29 16:43:23,104 [wrapper] pilotpid: 1715533
[2025-05-29 13:42:37] 2025-05-29 16:43:23,107 [wrapper] Pilot exit status: 0
[2025-05-29 13:42:37] 2025-05-29 16:43:23,142 [wrapper] pandaids: 6669238354
[2025-05-29 13:42:37] 2025-05-29 16:43:23,220 [wrapper] cleanup supervisor_pilot 2436698 1715534
[2025-05-29 13:42:37] 2025-05-29 16:43:23,225 [wrapper] Test setup, not cleaning
[2025-05-29 13:42:37] 2025-05-29 16:43:23,290 [wrapper] apfmon messages muted
[2025-05-29 13:42:37] 2025-05-29 16:43:23,294 [wrapper] ==== wrapper stdout END ====
[2025-05-29 13:42:37] 2025-05-29 16:43:23,298 [wrapper] ==== wrapper stderr END ====
[2025-05-29 13:42:37]  *** Error codes and diagnostics ***
[2025-05-29 13:42:37]     "exeErrorCode": 0,
[2025-05-29 13:42:37]     "exeErrorDiag": "",
[2025-05-29 13:42:37]     "pilotErrorCode": 0,
[2025-05-29 13:42:37]     "pilotErrorDiag": "",
[2025-05-29 13:42:37]  *** Listing of results directory ***
[2025-05-29 13:42:37] total 421784
[2025-05-29 13:42:37] -rw-r--r--. 1 boincer umatlas    495897 May 29 00:11 pilot3.tar.gz
[2025-05-29 13:42:37] -rw-r--r--. 1 boincer umatlas      5111 May 29 00:47 queuedata.json
[2025-05-29 13:42:37] -rwx------. 1 boincer umatlas     37140 May 29 00:48 runpilot2-wrapper.sh
[2025-05-29 13:42:37] -rw-r--r--. 1 boincer umatlas       100 May 29 08:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 13:42:37] -rwxr-xr-x. 1 boincer umatlas      7986 May 29 08:56 run_atlas
[2025-05-29 13:42:37] -rw-r--r--. 1 boincer umatlas       105 May 29 08:56 job.xml
[2025-05-29 13:42:37] -rw-r--r--. 2 boincer umatlas 222977008 May 29 08:56 EVNT.44871834._003737.pool.root.1
[2025-05-29 13:42:37] -rw-r--r--. 2 boincer umatlas     15093 May 29 08:56 start_atlas.sh
[2025-05-29 13:42:37] drwxrwx--x. 2 boincer umatlas      4096 May 29 08:56 shared
[2025-05-29 13:42:37] -rw-r--r--. 2 boincer umatlas    508881 May 29 08:56 input.tar.gz
[2025-05-29 13:42:37] -rw-r--r--. 1 boincer umatlas         0 May 29 08:56 boinc_lockfile
[2025-05-29 13:42:37] -rw-r--r--. 1 boincer umatlas      2559 May 29 08:56 pandaJob.out
[2025-05-29 13:42:37] -rw-------. 1 boincer umatlas    992820 May 29 08:57 agis_schedconf.cvmfs.json
[2025-05-29 13:42:37] drwx------. 4 boincer umatlas      4096 May 29 08:57 pilot3
[2025-05-29 13:42:37] -rw-------. 1 boincer umatlas 202034249 May 29 12:42 HITS.44871837._095156.pool.root.1
[2025-05-29 13:42:37] -rw-r--r--. 1 boincer umatlas       529 May 29 12:42 boinc_task_state.xml
[2025-05-29 13:42:37] -rw-------. 1 boincer umatlas        95 May 29 12:42 pilot_heartbeat.json
[2025-05-29 13:42:37] -rw-------. 1 boincer umatlas      1042 May 29 12:42 memory_monitor_summary.json
[2025-05-29 13:42:37] -rw-------. 1 boincer umatlas   1603667 May 29 12:42 agis_ddmendpoints.agis.ALL.json
[2025-05-29 13:42:37] -rw-------. 1 boincer umatlas    393523 May 29 12:42 log.44871837._095156.job.log.tgz.1
[2025-05-29 13:42:37] -rw-------. 1 boincer umatlas      7721 May 29 12:43 heartbeat.json
[2025-05-29 13:42:37] -rw-------. 1 boincer umatlas      4425 May 29 12:43 pilotlog.txt
[2025-05-29 13:42:37] -rw-------. 1 boincer umatlas   1133160 May 29 12:43 log.44871837._095156.job.log.1
[2025-05-29 13:42:37] -rw-------. 1 boincer umatlas       357 May 29 12:43 output.list
[2025-05-29 13:42:37] -rw-r--r--. 1 boincer umatlas       620 May 29 12:43 runtime_log
[2025-05-29 13:42:37] -rw-------. 1 boincer umatlas   1546240 May 29 12:43 result.tar.gz
[2025-05-29 13:42:37] -rw-r--r--. 1 boincer umatlas      8665 May 29 12:43 runtime_log.err
[2025-05-29 13:42:37] -rw-------. 1 boincer umatlas       657 May 29 12:43 o98LDmcMke7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjndKDmxD4qGm.diag
[2025-05-29 13:42:37] -rw-r--r--. 1 boincer umatlas      6841 May 29 13:37 init_data.xml
[2025-05-29 13:42:37] -rw-r--r--. 1 boincer umatlas        27 May 29 13:42 wrapper_checkpoint.txt
[2025-05-29 13:42:37] -rw-r--r--. 1 boincer umatlas      8192 May 29 13:42 boinc_mmap_file
[2025-05-29 13:42:37] -rw-r--r--. 1 boincer umatlas     21293 May 29 13:42 stderr.txt
[2025-05-29 13:42:37] HITS file was successfully produced:
[2025-05-29 13:42:37] -rw-------. 1 boincer umatlas 202034249 May 29 12:42 shared/HITS.pool.root.1
[2025-05-29 13:42:37]  *** Contents of shared directory: ***
[2025-05-29 13:42:37] total 417084
[2025-05-29 13:42:37] -rw-r--r--. 2 boincer umatlas 222977008 May 29 08:56 ATLAS.root_0
[2025-05-29 13:42:37] -rw-r--r--. 2 boincer umatlas     15093 May 29 08:56 start_atlas.sh
[2025-05-29 13:42:37] -rw-r--r--. 2 boincer umatlas    508881 May 29 08:56 input.tar.gz
[2025-05-29 13:42:37] -rw-------. 1 boincer umatlas 202034249 May 29 12:42 HITS.pool.root.1
[2025-05-29 13:42:37] -rw-------. 1 boincer umatlas   1546240 May 29 12:43 result.tar.gz
13:42:38 (1711797): run_atlas exited; CPU time 51634.036157
13:42:38 (1711797): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN