Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)
</message>
<stderr_txt>
07:06:39 (64196): wrapper (7.7.26015): starting
07:06:39 (64196): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 07:06:39] Arguments: --nthreads 8
[2025-05-29 07:06:39] Threads: 8
[2025-05-29 07:06:39] Checking for CVMFS
[2025-05-29 07:06:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 07:06:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 07:06:40] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 07:06:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 07:06:40] 2.11.2.0 2116 3119 220788 146558 0 836 13489113 18432000 26569 130560 0 29946599 98.773 68977560 52989 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-05-29 07:06:40] CVMFS is ok
[2025-05-29 07:06:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-29 07:06:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-29 07:06:40] Further information can be found at the LHC@home message board.
[2025-05-29 07:06:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 07:06:40] Checking for apptainer binary...
[2025-05-29 07:06:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 07:06:40] Running /usr/bin/apptainer --version
[2025-05-29 07:06:40] apptainer version 1.3.2-1.el7
[2025-05-29 07:06:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 07:06:41] c-212-18.aglt2.org
[2025-05-29 07:06:41] apptainer works
[2025-05-29 07:06:41] Set ATHENA_PROC_NUMBER=8
[2025-05-29 07:06:41] Set ATHENA_CORE_NUMBER=8
[2025-05-29 07:06:41] Starting ATLAS job with PandaID=6669237998
[2025-05-29 07:06:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 08:50:14] Job failed
[2025-05-29 08:50:14] ++ pwd
[2025-05-29 08:50:14] + export RUNTIME_CONFIG_DIR=/tmp/boinchome/slots/2/
[2025-05-29 08:50:14] + RUNTIME_CONFIG_DIR=/tmp/boinchome/slots/2/
[2025-05-29 08:50:14] + mv ATLAS.root_0 EVNT.44871834._003689.pool.root.1
[2025-05-29 08:50:14] + tar --strip-components=5 -xvf input.tar.gz
[2025-05-29 08:50:14] + umask 077
[2025-05-29 08:50:14] ++ date +%s
[2025-05-29 08:50:14] + ACCOUNTING_STARTTIME=1748516802
[2025-05-29 08:50:14] + echo 'Detecting resource accounting method available for the job.'
[2025-05-29 08:50:14] Detecting resource accounting method available for the job.
[2025-05-29 08:50:14] + JOB_ACCOUNTING=
[2025-05-29 08:50:14] + command -v arc-job-cgroup
[2025-05-29 08:50:14] + '[' -z '' ']'
[2025-05-29 08:50:14] + GNU_TIME=/usr/bin/time
[2025-05-29 08:50:14] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-05-29 08:50:14] Looking for /usr/bin/time tool for accounting measurements
[2025-05-29 08:50:14] + '[' '!' -z /usr/bin/time ']'
[2025-05-29 08:50:14] + /usr/bin/time --version
[2025-05-29 08:50:14] + echo 'GNU time found and will be used for job accounting.'
[2025-05-29 08:50:14] GNU time found and will be used for job accounting.
[2025-05-29 08:50:14] + JOB_ACCOUNTING=gnutime
[2025-05-29 08:50:14] + '[' -z gnutime ']'
[2025-05-29 08:50:14] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-05-29 08:50:14] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-05-29 08:50:14] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-05-29/BOINC_MCORE/6669237998.out
[2025-05-29 08:50:14] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-05-29/BOINC_MCORE/6669237998.out
[2025-05-29 08:50:14] + export PILOT_NOKILL=YES
[2025-05-29 08:50:14] + PILOT_NOKILL=YES
[2025-05-29 08:50:14] + export GRID_GLOBAL_JOBID=Pi6KDmc9je7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYdUKDmODrXIn
[2025-05-29 08:50:14] + GRID_GLOBAL_JOBID=Pi6KDmc9je7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYdUKDmODrXIn
[2025-05-29 08:50:14] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/Pi6KDmc9je7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYdUKDmODrXIn
[2025-05-29 08:50:14] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/Pi6KDmc9je7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYdUKDmODrXIn
[2025-05-29 08:50:14] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-05-29 08:50:14] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-05-29 08:50:14] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-05-29 08:50:14] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2025-05-29 08:50:14] ++ pwd
[2025-05-29 08:50:14] + RUNTIME_JOB_DIR=/tmp/boinchome/slots/2
[2025-05-29 08:50:14] + RUNTIME_JOB_STDIN=/dev/null
[2025-05-29 08:50:14] ++ pwd
[2025-05-29 08:50:14] + RUNTIME_JOB_STDOUT=/tmp/boinchome/slots/2/log.44871837._094969.job.log.1
[2025-05-29 08:50:14] ++ pwd
[2025-05-29 08:50:14] + RUNTIME_JOB_STDERR=/tmp/boinchome/slots/2/log.44871837._094969.job.log.1
[2025-05-29 08:50:14] ++ pwd
[2025-05-29 08:50:14] + RUNTIME_JOB_DIAG=/tmp/boinchome/slots/2.diag
[2025-05-29 08:50:14] + '[' '!' -z '' ']'
[2025-05-29 08:50:14] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-05-29 08:50:14] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-05-29 08:50:14] + RUNTIME_FRONTEND_SEES_NODE=
[2025-05-29 08:50:14] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-05-29 08:50:14] + '[' '!' -z '' ']'
[2025-05-29 08:50:14] + '[' -z yes ']'
[2025-05-29 08:50:14] ++ pwd
[2025-05-29 08:50:14] + RUNTIME_JOB_DIAG=/tmp/boinchome/slots/2/Pi6KDmc9je7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYdUKDmODrXIn.diag
[2025-05-29 08:50:14] + runtimeenvironments=
[2025-05-29 08:50:14] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-05-29 08:50:14] + RTE_function_0 1
[2025-05-29 08:50:14] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-05-29 08:50:14] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-05-29 08:50:14] + export BOINC_APP=ATLAS
[2025-05-29 08:50:14] + BOINC_APP=ATLAS
[2025-05-29 08:50:14] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-05-29 08:50:14] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-05-29 08:50:14] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-05-29 08:50:14] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-05-29 08:50:14] + '[' -z 1 ']'
[2025-05-29 08:50:14] + '[' 1 == 1 ']'
[2025-05-29 08:50:14] + shift
[2025-05-29 08:50:14] + export ATLAS_LOCAL_AREA=/tmp/boinchome/slots/2/
[2025-05-29 08:50:14] + ATLAS_LOCAL_AREA=/tmp/boinchome/slots/2/
[2025-05-29 08:50:14] + '[' 0 -ne 0 ']'
[2025-05-29 08:50:14] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-05-29 08:50:14] + '[' -f /etc/os-release ']'
[2025-05-29 08:50:14] +++ cat /etc/os-release
[2025-05-29 08:50:14] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-05-29 08:50:14] +++ NAME='CentOS Linux'
[2025-05-29 08:50:14] +++ VERSION='7 (Core)'
[2025-05-29 08:50:14] +++ ID=centos
[2025-05-29 08:50:14] +++ ID_LIKE='rhel fedora'
[2025-05-29 08:50:14] +++ VERSION_ID=7
[2025-05-29 08:50:14] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-05-29 08:50:14] +++ ANSI_COLOR='0;31'
[2025-05-29 08:50:14] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-05-29 08:50:14] +++ HOME_URL=https://www.centos.org/
[2025-05-29 08:50:14] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-05-29 08:50:14] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-05-29 08:50:14] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-05-29 08:50:14] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-05-29 08:50:14] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-05-29 08:50:14] ++ echo 'CentOS Linux 7 (Core)'
[2025-05-29 08:50:14] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-05-29 08:50:14] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-05-29 08:50:14] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-05-29 08:50:14] + HOME=/tmp/boinchome/slots/2
[2025-05-29 08:50:14] + export HOME
[2025-05-29 08:50:14] + cd /tmp/boinchome/slots/2
[2025-05-29 08:50:14] + '[' '!' -z '' ']'
[2025-05-29 08:50:14] + '[' -z '' ']'
[2025-05-29 08:50:14] ++ /bin/hostname -f
[2025-05-29 08:50:14] + nodename=c-212-18.aglt2.org
[2025-05-29 08:50:14] + echo nodename=c-212-18.aglt2.org
[2025-05-29 08:50:14] + echo Processors=2
[2025-05-29 08:50:14] + echo Nodecount=1
[2025-05-29 08:50:14] + echo Benchmark=HEPSPEC:1.0
[2025-05-29 08:50:14] + executable=./runpilot2-wrapper.sh
[2025-05-29 08:50:14] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-05-29 08:50:14] ++ tr -d '\0'
[2025-05-29 08:50:14] ++ head -n 1
[2025-05-29 08:50:14] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-05-29 08:50:14] + line1='#!/bin/bash'
[2025-05-29 08:50:14] ++ echo '#!/bin/bash'
[2025-05-29 08:50:14] ++ sed -n 's/^#! *//p'
[2025-05-29 08:50:14] + shebang=/bin/bash
[2025-05-29 08:50:14] ++ echo /bin/bash
[2025-05-29 08:50:14] ++ awk '{print $1}'
[2025-05-29 08:50:14] + interpreter=/bin/bash
[2025-05-29 08:50:14] + '[' /bin/bash = /usr/bin/env ']'
[2025-05-29 08:50:14] + '[' x/bin/bash = x ']'
[2025-05-29 08:50:14] + type /bin/bash
[2025-05-29 08:50:14] + '[' xgnutime = xgnutime ']'
[2025-05-29 08:50:14] + /usr/bin/time -o /tmp/boinchome/slots/2/Pi6KDmc9je7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYdUKDmODrXIn.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.2.2 -z -t --piloturl local --mute --container
[2025-05-29 08:50:14] + RESULT=135
[2025-05-29 08:50:14] + sed -i -e /nodename=/d /tmp/boinchome/slots/2/Pi6KDmc9je7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYdUKDmODrXIn.diag
[2025-05-29 08:50:14] start_atlas.sh: line 233: /usr/bin/sed: Transport endpoint is not connected
[2025-05-29 08:50:14] ++ awk -F '<' '{print $1}'
[2025-05-29 08:50:14] ++ sed -e 's# #_#g'
[2025-05-29 08:50:14] start_atlas.sh: line 234: awk: command not found
[2025-05-29 08:50:14] ++ awk -F '>' '{print $2}'
[2025-05-29 08:50:14] start_atlas.sh: line 234: /usr/bin/sed: Transport endpoint is not connected
[2025-05-29 08:50:14] start_atlas.sh: line 234: awk: command not found
[2025-05-29 08:50:14] ++ grep domain_name init_data.xml
[2025-05-29 08:50:14] start_atlas.sh: line 234: /usr/bin/grep: Transport endpoint is not connected
[2025-05-29 08:50:14] + hostname=
[2025-05-29 08:50:14] ++ awk -F '>' '{print $2}'
[2025-05-29 08:50:14] ++ awk -F '<' '{print $1}'
[2025-05-29 08:50:14] start_atlas.sh: line 235: awk: command not found
[2025-05-29 08:50:14] start_atlas.sh: line 235: awk: command not found
[2025-05-29 08:50:14] ++ sed -e 's# #_#g'
[2025-05-29 08:50:14] ++ grep user_name init_data.xml
[2025-05-29 08:50:14] start_atlas.sh: line 235: /usr/bin/sed: Transport endpoint is not connected
[2025-05-29 08:50:14] start_atlas.sh: line 235: /usr/bin/grep: Transport endpoint is not connected
[2025-05-29 08:50:14] + username=
[2025-05-29 08:50:14] + nodename=@
[2025-05-29 08:50:14] + echo nodename=@
[2025-05-29 08:50:14] + '[' -n 8 ']'
[2025-05-29 08:50:14] + sed -i -e s/Processors=1/Processors=8/ /tmp/boinchome/slots/2/Pi6KDmc9je7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYdUKDmODrXIn.diag
[2025-05-29 08:50:14] start_atlas.sh: line 238: /usr/bin/sed: Transport endpoint is not connected
[2025-05-29 08:50:14] + echo exitcode=135
[2025-05-29 08:50:14] + runtimeenvironments=
[2025-05-29 08:50:14] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-05-29 08:50:14] + RTE_function_0 2
[2025-05-29 08:50:14] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-05-29 08:50:14] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-05-29 08:50:14] + export BOINC_APP=ATLAS
[2025-05-29 08:50:14] + BOINC_APP=ATLAS
[2025-05-29 08:50:14] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-05-29 08:50:14] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-05-29 08:50:14] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-05-29 08:50:14] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-05-29 08:50:14] + '[' -z 2 ']'
[2025-05-29 08:50:14] + '[' 2 == 1 ']'
[2025-05-29 08:50:14] + '[' 0 -ne 0 ']'
[2025-05-29 08:50:14] + echo 'zip all output files'
[2025-05-29 08:50:14] + flist='*.diag '
[2025-05-29 08:50:14] + for f in ./heartbeat.json ./output.list ./log.44871837._094969.job.log.1 ./log.44871837._094969.job.log.1 ./gmlog/
[2025-05-29 08:50:14] + '[' -e ./heartbeat.json ']'
[2025-05-29 08:50:14] + flist='*.diag  ./heartbeat.json'
[2025-05-29 08:50:14] + for f in ./heartbeat.json ./output.list ./log.44871837._094969.job.log.1 ./log.44871837._094969.job.log.1 ./gmlog/
[2025-05-29 08:50:14] + '[' -e ./output.list ']'
[2025-05-29 08:50:14] + for f in ./heartbeat.json ./output.list ./log.44871837._094969.job.log.1 ./log.44871837._094969.job.log.1 ./gmlog/
[2025-05-29 08:50:14] + '[' -e ./log.44871837._094969.job.log.1 ']'
[2025-05-29 08:50:14] + flist='*.diag  ./heartbeat.json ./log.44871837._094969.job.log.1'
[2025-05-29 08:50:14] + for f in ./heartbeat.json ./output.list ./log.44871837._094969.job.log.1 ./log.44871837._094969.job.log.1 ./gmlog/
[2025-05-29 08:50:14] + '[' -e ./log.44871837._094969.job.log.1 ']'
[2025-05-29 08:50:14] + flist='*.diag  ./heartbeat.json ./log.44871837._094969.job.log.1 ./log.44871837._094969.job.log.1'
[2025-05-29 08:50:14] + for f in ./heartbeat.json ./output.list ./log.44871837._094969.job.log.1 ./log.44871837._094969.job.log.1 ./gmlog/
[2025-05-29 08:50:14] + '[' -e ./gmlog/ ']'
[2025-05-29 08:50:14] + '[' -f output.list ']'
[2025-05-29 08:50:14] + tar cvf result.tar.gz Pi6KDmc9je7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYdUKDmODrXIn.diag ./heartbeat.json ./log.44871837._094969.job.log.1 ./log.44871837._094969.job.log.1
[2025-05-29 08:50:14] start_atlas.sh: line 270: /usr/bin/tar: Transport endpoint is not connected
[2025-05-29 08:50:14] + '[' xgnutime = xcgroup ']'
[2025-05-29 08:50:14] + '[' -n '' ']'
[2025-05-29 08:50:14] + '[' -n '' ']'
[2025-05-29 08:50:14] ++ date +%s
[2025-05-29 08:50:14] start_atlas.sh: line 322: /usr/bin/date: Transport endpoint is not connected
[2025-05-29 08:50:14] + ACCOUNTING_ENDTIME=
[2025-05-29 08:50:14] ++ date -d '1970-01-01 UTC 1748516802 seconds' +%Y%m%d%H%M%SZ
[2025-05-29 08:50:14] start_atlas.sh: line 324: /usr/bin/date: Transport endpoint is not connected
[2025-05-29 08:50:14] + echo LRMSStartTime=
[2025-05-29 08:50:14] ++ date -d '1970-01-01 UTC  seconds' +%Y%m%d%H%M%SZ
[2025-05-29 08:50:14] start_atlas.sh: line 325: /usr/bin/date: Transport endpoint is not connected
[2025-05-29 08:50:14] + echo LRMSEndTime=
[2025-05-29 08:50:14] + echo walltime=-1748516802
[2025-05-29 08:50:14] + echo exitcode=135
[2025-05-29 08:50:14] + exit 135
[2025-05-29 08:50:14] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-05-29 08:50:14] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2025-05-29 08:50:14] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-05-29 08:50:14] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-05-29 08:50:14] ./pilot3/pilot/util/realtimelogger.py
[2025-05-29 08:50:14] ./pilot3/pilot/util/loggingsupport.py
[2025-05-29 08:50:14] ./runtime_log.err
[2025-05-29 08:50:14] ./PanDA_Pilot-6669237998/log.EVNTtoHITS
[2025-05-29 08:50:14] ./PanDA_Pilot-6669237998/prmon.log
[2025-05-29 08:50:14] ./PanDA_Pilot-6669237998/pilotlog.txt
[2025-05-29 08:50:14] ./PanDA_Pilot-6669237998/PoolFileCatalog.xml
[2025-05-29 08:50:14] ./log.44871837._094969.job.log.1
[2025-05-29 08:50:14] ./runtime_log
[2025-05-29 08:50:14] ./pilotlog.txt
09:00:15 (64196): run_atlas exited; CPU time 30945.492177
09:00:15 (64196): app exit status: 0x1
09:00:15 (64196): called boinc_finish(195)

</stderr_txt>
]]>

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