Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:37:31 (1359126): wrapper (7.7.26015): starting
13:37:31 (1359126): wrapper: running run_atlas (--nthreads 12)
[2025-05-29 13:37:31] Arguments: --nthreads 12
[2025-05-29 13:37:31] Threads: 12
[2025-05-29 13:37:31] Checking for CVMFS
[2025-05-29 13:37:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 13:37:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 13:37:33] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 13:37:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 13:37:35] 2.12.7.0 39975 7555 181448 146563 2 187 3393312 4096000 16000 130560 0 77413972 99.999 1873657 1098 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-05-29 13:37:35] CVMFS is ok
[2025-05-29 13:37:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 13:37:35] Checking for apptainer binary...
[2025-05-29 13:37:35] apptainer is not installed, using version from CVMFS
[2025-05-29 13:37:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 13:37:36] epyc7v12
[2025-05-29 13:37:36] apptainer works
[2025-05-29 13:37:36] Set ATHENA_PROC_NUMBER=12
[2025-05-29 13:37:36] Set ATHENA_CORE_NUMBER=12
[2025-05-29 13:37:36] Starting ATLAS job with PandaID=6666594342
[2025-05-29 13:37:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 16:07:59]  *** The last 200 lines of the pilot log: ***
[2025-05-29 16:07:59] 2025-05-29 16:07:37,960 | INFO     | mean y: 2495226.205673759
[2025-05-29 16:07:59] 2025-05-29 16:07:37,960 | INFO     | -- intersect: -158379671370.30133
[2025-05-29 16:07:59] 2025-05-29 16:07:37,960 | INFO     | intersect: -158379671370.30133
[2025-05-29 16:07:59] 2025-05-29 16:07:37,960 | INFO     | chi2: 7.264442109941129
[2025-05-29 16:07:59] 2025-05-29 16:07:37,977 | INFO     | sum of square deviations: 779958871.9926479
[2025-05-29 16:07:59] 2025-05-29 16:07:37,978 | INFO     | sum of deviations: 85810947763.84558
[2025-05-29 16:07:59] 2025-05-29 16:07:37,978 | INFO     | mean x: 1748530326.5073528
[2025-05-29 16:07:59] 2025-05-29 16:07:37,978 | INFO     | mean y: 2506807.654411765
[2025-05-29 16:07:59] 2025-05-29 16:07:37,978 | INFO     | -- intersect: -192370514257.02124
[2025-05-29 16:07:59] 2025-05-29 16:07:37,978 | INFO     | intersect: -192370514257.02124
[2025-05-29 16:07:59] 2025-05-29 16:07:37,978 | INFO     | chi2: 6.4679845857882405
[2025-05-29 16:07:59] 2025-05-29 16:07:37,979 | INFO     | current chi2=6.4679845857882405 (change=10.963781004778946 %)
[2025-05-29 16:07:59] 2025-05-29 16:07:37,979 | INFO     | right removable region: 135
[2025-05-29 16:07:59] 2025-05-29 16:07:37,979 | INFO     | sum of square deviations: 779958261.9926479
[2025-05-29 16:07:59] 2025-05-29 16:07:37,980 | INFO     | sum of deviations: 29053044919.727936
[2025-05-29 16:07:59] 2025-05-29 16:07:37,980 | INFO     | mean x: 1748530631.5073528
[2025-05-29 16:07:59] 2025-05-29 16:07:37,980 | INFO     | mean y: 2580048.7720588236
[2025-05-29 16:07:59] 2025-05-29 16:07:37,980 | INFO     | -- intersect: -65129288483.42158
[2025-05-29 16:07:59] 2025-05-29 16:07:37,980 | INFO     | intersect: -65129288483.42158
[2025-05-29 16:07:59] 2025-05-29 16:07:37,980 | INFO     | chi2: 2.3847549332167617
[2025-05-29 16:07:59] 2025-05-29 16:07:37,985 | INFO     | current chi2=2.3847549332167617 (change=67.17222193906245 %)
[2025-05-29 16:07:59] 2025-05-29 16:07:37,985 | INFO     | sum of square deviations: 697054076.9923683
[2025-05-29 16:07:59] 2025-05-29 16:07:37,986 | INFO     | sum of deviations: 2564226258.824421
[2025-05-29 16:07:59] 2025-05-29 16:07:37,986 | INFO     | mean x: 1748530784.0076337
[2025-05-29 16:07:59] 2025-05-29 16:07:37,986 | INFO     | mean y: 2628444.175572519
[2025-05-29 16:07:59] 2025-05-29 16:07:37,986 | INFO     | -- intersect: -6429625090.673655
[2025-05-29 16:07:59] 2025-05-29 16:07:37,986 | INFO     | intersect: -6429625090.673655
[2025-05-29 16:07:59] 2025-05-29 16:07:37,986 | INFO     | chi2: 1.0383944689178828
[2025-05-29 16:07:59] 2025-05-29 16:07:37,987 | INFO     | current chi2=1.0383944689178828 (change=56.45697365149351 %)
[2025-05-29 16:07:59] 2025-05-29 16:07:37,987 | INFO     | sum of square deviations: 620243029.4920647
[2025-05-29 16:07:59] 2025-05-29 16:07:37,988 | INFO     | sum of deviations: -5680159273.428572
[2025-05-29 16:07:59] 2025-05-29 16:07:37,988 | INFO     | mean x: 1748530936.5079365
[2025-05-29 16:07:59] 2025-05-29 16:07:37,988 | INFO     | mean y: 2644681.4285714286
[2025-05-29 16:07:59] 2025-05-29 16:07:37,988 | INFO     | -- intersect: 16015616599.897133
[2025-05-29 16:07:59] 2025-05-29 16:07:37,988 | INFO     | intersect: 16015616599.897133
[2025-05-29 16:07:59] 2025-05-29 16:07:37,988 | INFO     | chi2: 0.9012780651593255
[2025-05-29 16:07:59] 2025-05-29 16:07:37,988 | INFO     | current chi2=0.9012780651593255 (change=13.20465467246249 %)
[2025-05-29 16:07:59] 2025-05-29 16:07:37,988 | INFO     | left removable region: 30
[2025-05-29 16:07:59] 2025-05-29 16:07:37,993 | INFO     | sum of square deviations: 358925952.9904774
[2025-05-29 16:07:59] 2025-05-29 16:07:37,993 | INFO     | sum of deviations: 2553547809.15238
[2025-05-29 16:07:59] 2025-05-29 16:07:37,994 | INFO     | mean x: 1748531211.0095239
[2025-05-29 16:07:59] 2025-05-29 16:07:37,994 | INFO     | mean y: 2666175.8476190474
[2025-05-29 16:07:59] 2025-05-29 16:07:37,994 | INFO     | -- intersect: -12437108674.388378
[2025-05-29 16:07:59] 2025-05-29 16:07:37,994 | INFO     | intersect: -12437108674.388378
[2025-05-29 16:07:59] 2025-05-29 16:07:37,994 | INFO     | chi2: 0.0003763861883344604
[2025-05-29 16:07:59] 2025-05-29 16:07:37,994 | INFO     | -- intersect: -12437108674.388378
[2025-05-29 16:07:59] 2025-05-29 16:07:37,994 | INFO     | current memory leak: 7.11 B/s (using 105 data points, chi2=0.00)
[2025-05-29 16:07:59] 2025-05-29 16:07:37,995 | INFO     | ..............................
[2025-05-29 16:07:59] 2025-05-29 16:07:37,995 | INFO     | . Timing measurements:
[2025-05-29 16:07:59] 2025-05-29 16:07:37,995 | INFO     | . get job = 0 s
[2025-05-29 16:07:59] 2025-05-29 16:07:37,996 | INFO     | . initial setup = 5 s
[2025-05-29 16:07:59] 2025-05-29 16:07:37,996 | INFO     | . payload setup = 90 s
[2025-05-29 16:07:59] 2025-05-29 16:07:37,996 | INFO     | . stage-in = 0 s
[2025-05-29 16:07:59] 2025-05-29 16:07:37,996 | INFO     | . payload execution = 8641 s
[2025-05-29 16:07:59] 2025-05-29 16:07:37,996 | INFO     | . stage-out = 2 s
[2025-05-29 16:07:59] 2025-05-29 16:07:37,996 | INFO     | . log creation = 0 s
[2025-05-29 16:07:59] 2025-05-29 16:07:37,996 | INFO     | ..............................
[2025-05-29 16:07:59] 2025-05-29 16:07:38,058 | INFO     | sufficient remaining disk space (312493473792 B)
[2025-05-29 16:07:59] 2025-05-29 16:07:38,059 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-05-29 16:07:59] 2025-05-29 16:07:38,060 | INFO     | size of work directory /opt/boinc/instance_homes/boinc_31417/slots/14/PanDA_Pilot-6666594342: 4604377 B (within 2537553920 B limit)
[2025-05-29 16:07:59] 2025-05-29 16:07:38,060 | INFO     | pfn file=/opt/boinc/instance_homes/boinc_31417/slots/14/PanDA_Pilot-6666594342/HITS.44871837._059795.pool.root.1 does not exist (skip from workdir size calculation
[2025-05-29 16:07:59] 2025-05-29 16:07:38,060 | INFO     | total size of present files: 0 B (workdir size: 4604377 B)
[2025-05-29 16:07:59] 2025-05-29 16:07:38,060 | INFO     | output file size check: skipping output file /opt/boinc/instance_homes/boinc_31417/slots/14/PanDA_Pilot-6666594342/HITS.44871837._059795.pool.root.1 since it does 
[2025-05-29 16:07:59] 2025-05-29 16:07:38,433 | INFO     | 
[2025-05-29 16:07:59] 2025-05-29 16:07:38,433 | INFO     | job summary report
[2025-05-29 16:07:59] 2025-05-29 16:07:38,433 | INFO     | --------------------------------------------------
[2025-05-29 16:07:59] 2025-05-29 16:07:38,433 | INFO     | PanDA job id: 6666594342
[2025-05-29 16:07:59] 2025-05-29 16:07:38,433 | INFO     | task id: 44871837
[2025-05-29 16:07:59] 2025-05-29 16:07:38,433 | INFO     | errors: (none)
[2025-05-29 16:07:59] 2025-05-29 16:07:38,434 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 16:07:59] 2025-05-29 16:07:38,434 | INFO     | pilot state: finished 
[2025-05-29 16:07:59] 2025-05-29 16:07:38,434 | INFO     | transexitcode: 0
[2025-05-29 16:07:59] 2025-05-29 16:07:38,434 | INFO     | exeerrorcode: 0
[2025-05-29 16:07:59] 2025-05-29 16:07:38,434 | INFO     | exeerrordiag: 
[2025-05-29 16:07:59] 2025-05-29 16:07:38,434 | INFO     | exitcode: 0
[2025-05-29 16:07:59] 2025-05-29 16:07:38,434 | INFO     | exitmsg: OK
[2025-05-29 16:07:59] 2025-05-29 16:07:38,434 | INFO     | cpuconsumptiontime: 57143 s
[2025-05-29 16:07:59] 2025-05-29 16:07:38,434 | INFO     | nevents: 400
[2025-05-29 16:07:59] 2025-05-29 16:07:38,434 | INFO     | neventsw: 0
[2025-05-29 16:07:59] 2025-05-29 16:07:38,434 | INFO     | pid: 1385479
[2025-05-29 16:07:59] 2025-05-29 16:07:38,435 | INFO     | pgrp: 1385479
[2025-05-29 16:07:59] 2025-05-29 16:07:38,435 | INFO     | corecount: 12
[2025-05-29 16:07:59] 2025-05-29 16:07:38,435 | INFO     | event service: False
[2025-05-29 16:07:59] 2025-05-29 16:07:38,435 | INFO     | sizes: {0: 2405036, 1: 2405235, 12: 2405235, 23: 2405263, 34: 2405291, 44: 2405319, 54: 2405681, 55: 2405709, 8735: 2433749, 8738: 2442794, 8791: 2442936}
[2025-05-29 16:07:59] 2025-05-29 16:07:38,435 | INFO     | --------------------------------------------------
[2025-05-29 16:07:59] 2025-05-29 16:07:38,435 | INFO     | 
[2025-05-29 16:07:59] 2025-05-29 16:07:38,435 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/14
[2025-05-29 16:07:59] 2025-05-29 16:07:38,657 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 16:07:59] 2025-05-29 16:07:38,657 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 16:07:59] 2025-05-29 16:07:38,658 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 16:07:59] 2025-05-29 16:07:38,658 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 16:07:59] 2025-05-29 16:07:38,658 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 16:07:59] 2025-05-29 16:07:38,658 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 16:07:59] 2025-05-29 16:07:38,658 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 16:07:59] 2025-05-29 16:07:38,658 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 16:07:59] 2025-05-29 16:07:38,658 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 16:07:59] 2025-05-29 16:07:38,658 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 16:07:59] 2025-05-29 16:07:38,658 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 16:07:59] 2025-05-29 16:07:38,658 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 16:07:59] 2025-05-29 16:07:38,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 16:07:59] 2025-05-29 16:07:38,659 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 16:07:59] 2025-05-29 16:07:38,659 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 16:07:59] 2025-05-29 16:07:38,659 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 16:07:59] 2025-05-29 16:07:38,659 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 16:07:59] 2025-05-29 16:07:38,659 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 16:07:59] 2025-05-29 16:07:38,659 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 16:07:59] 2025-05-29 16:07:38,659 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 16:07:59] 2025-05-29 16:07:38,659 | INFO     | job 6666594342 has completed (purged errors)
[2025-05-29 16:07:59] 2025-05-29 16:07:38,660 | INFO     | overall cleanup function is called
[2025-05-29 16:07:59] 2025-05-29 16:07:39,442 | INFO     | PID=1372848 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-29 16:07:59] 2025-05-29 16:07:39,442 | INFO     | .. there are 19 such processes running
[2025-05-29 16:07:59] 2025-05-29 16:07:39,713 | INFO     | --- collectZombieJob: --- 10, [1385479]
[2025-05-29 16:07:59] 2025-05-29 16:07:39,713 | INFO     | zombie collector waiting for pid 1385479
[2025-05-29 16:07:59] 2025-05-29 16:07:39,713 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 16:07:59] 2025-05-29 16:07:39,713 | INFO     | collected zombie processes
[2025-05-29 16:07:59] 2025-05-29 16:07:39,713 | INFO     | will attempt to kill all subprocesses of pid=1385479
[2025-05-29 16:07:59] 2025-05-29 16:07:40,068 | INFO     | number of running child processes to parent process 1385479: 1
[2025-05-29 16:07:59] 2025-05-29 16:07:40,073 | INFO     | maximum number of monitored processes: 7
[2025-05-29 16:07:59] 2025-05-29 16:07:40,073 | INFO     | aborting job monitoring since job object (job id=6666594342) has expired
[2025-05-29 16:07:59] 2025-05-29 16:07:40,962 | INFO     | process IDs to be killed: [1385479] (in reverse order)
[2025-05-29 16:07:59] 2025-05-29 16:07:42,509 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 16:07:59] 2025-05-29 16:07:42,509 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 16:07:59] 2025-05-29 16:07:42,547 | INFO     | did not find any defunct processes belonging to 1385479
[2025-05-29 16:07:59] 2025-05-29 16:07:42,589 | INFO     | did not find any defunct processes belonging to 1385479
[2025-05-29 16:07:59] 2025-05-29 16:07:42,589 | INFO     | ready for new job
[2025-05-29 16:07:59] 2025-05-29 16:07:42,589 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 16:07:59] 2025-05-29 16:07:42,591 | INFO     | **************************************
[2025-05-29 16:07:59] 2025-05-29 16:07:42,591 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 16:07:59] 2025-05-29 16:07:42,592 | INFO     | **************************************
[2025-05-29 16:07:59] 2025-05-29 16:07:42,592 | INFO     | 
[2025-05-29 16:07:59] 2025-05-29 16:07:42,610 | INFO     | architecture information:
[2025-05-29 16:07:59] 2025-05-29 16:07:42,621 | INFO     | executing command: cat /etc/os-release
[2025-05-29 16:07:59] 2025-05-29 16:07:42,714 | INFO     | cat /etc/os-release:
[2025-05-29 16:07:59] NAME="CentOS Linux"
[2025-05-29 16:07:59] VERSION="7 (Core)"
[2025-05-29 16:07:59] ID="centos"
[2025-05-29 16:07:59] ID_LIKE="rhel fedora"
[2025-05-29 16:07:59] VERSION_ID="7"
[2025-05-29 16:07:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 16:07:59] ANSI_COLOR="0;31"
[2025-05-29 16:07:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 16:07:59] HOME_URL="https://www.centos.org/"
[2025-05-29 16:07:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 16:07:59] 
[2025-05-29 16:07:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 16:07:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 16:07:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 16:07:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 16:07:59] 
[2025-05-29 16:07:59] 2025-05-29 16:07:42,715 | INFO     | **************************************
[2025-05-29 16:07:59] 2025-05-29 16:07:43,221 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/14
[2025-05-29 16:07:59] 2025-05-29 16:07:43,294 | INFO     | sufficient remaining disk space (312488230912 B)
[2025-05-29 16:07:59] 2025-05-29 16:07:43,294 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 16:07:59] 2025-05-29 16:07:43,295 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 16:07:59] 2025-05-29 16:07:43,295 | INFO     | update_server=False
[2025-05-29 16:07:59] 2025-05-29 16:07:43,295 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 16:07:59] 2025-05-29 16:07:43,457 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 16:07:59] 2025-05-29 16:07:43,461 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 16:07:59] 2025-05-29 16:07:43,461 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 16:07:59] 2025-05-29 16:07:43,461 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 16:07:59] 2025-05-29 16:07:43,477 | INFO     | all data control threads have been joined
[2025-05-29 16:07:59] 2025-05-29 16:07:43,589 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 16:07:59] 2025-05-29 16:07:43,589 | INFO     | aborting loop
[2025-05-29 16:07:59] 2025-05-29 16:07:43,809 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 16:07:59] 2025-05-29 16:07:44,117 | INFO     | all payload control threads have been joined
[2025-05-29 16:07:59] 2025-05-29 16:07:44,301 | INFO     | [job] retrieve thread has finished
[2025-05-29 16:07:59] 2025-05-29 16:07:44,453 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 16:07:59] 2025-05-29 16:07:44,469 | INFO     | [job] queue monitor thread has finished
[2025-05-29 16:07:59] 2025-05-29 16:07:44,473 | INFO     | [data] copytool_in thread has finished
[2025-05-29 16:07:59] 2025-05-29 16:07:44,481 | INFO     | [data] control thread has finished
[2025-05-29 16:07:59] 2025-05-29 16:07:44,569 | INFO     | [payload] failed_post thread has finished
[2025-05-29 16:07:59] 2025-05-29 16:07:44,597 | INFO     | [job] job monitor thread has finished
[2025-05-29 16:07:59] 2025-05-29 16:07:44,625 | INFO     | all job control threads have been joined
[2025-05-29 16:07:59] 2025-05-29 16:07:44,777 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 16:07:59] 2025-05-29 16:07:45,121 | INFO     | [payload] control thread has finished
[2025-05-29 16:07:59] 2025-05-29 16:07:45,181 | INFO     | [job] validate thread has finished
[2025-05-29 16:07:59] 2025-05-29 16:07:45,257 | INFO     | [payload] validate_post thread has finished
[2025-05-29 16:07:59] 2025-05-29 16:07:45,537 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 16:07:59] 2025-05-29 16:07:45,557 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 16:07:59] 2025-05-29 16:07:45,633 | INFO     | [job] control thread has finished
[2025-05-29 16:07:59] 2025-05-29 16:07:45,821 | INFO     | [data] copytool_out thread has finished
[2025-05-29 16:07:59] 2025-05-29 16:07:46,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 16:07:59] 2025-05-29 16:07:50,053 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 16:07:59] 2025-05-29 16:07:52,117 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139843912623936)>', '<ExcThread(monitor, started 139843254347520)>']
[2025-05-29 16:07:59] 2025-05-29 16:07:52,497 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 16:07:59] 2025-05-29 16:07:52,497 | INFO     | [monitor] control thread has ended
[2025-05-29 16:07:59] 2025-05-29 16:07:57,141 | INFO     | all workflow threads have been joined
[2025-05-29 16:07:59] 2025-05-29 16:07:57,141 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 16:07:59] 2025-05-29 16:07:57,141 | INFO     | traces error code: 0
[2025-05-29 16:07:59] 2025-05-29 16:07:57,141 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 16:07:59] 2025-05-29 16:07:57,513 [wrapper] ==== pilot stdout END ====
[2025-05-29 16:07:59] 2025-05-29 16:07:57,561 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 16:07:59] 2025-05-29 16:07:57,606 [wrapper] pilotpid: 1372848
[2025-05-29 16:07:59] 2025-05-29 16:07:57,653 [wrapper] Pilot exit status: 0
[2025-05-29 16:07:59] 2025-05-29 16:07:57,825 [wrapper] pandaids: 6666594342
[2025-05-29 16:07:59] 2025-05-29 16:07:58,277 [wrapper] cleanup supervisor_pilot 1896232 1372849
[2025-05-29 16:07:59] 2025-05-29 16:07:58,317 [wrapper] Test setup, not cleaning
[2025-05-29 16:07:59] 2025-05-29 16:07:58,365 [wrapper] apfmon messages muted
[2025-05-29 16:07:59] 2025-05-29 16:07:58,408 [wrapper] ==== wrapper stdout END ====
[2025-05-29 16:07:59] 2025-05-29 16:07:58,461 [wrapper] ==== wrapper stderr END ====
[2025-05-29 16:07:59]  *** Error codes and diagnostics ***
[2025-05-29 16:07:59]     "exeErrorCode": 0,
[2025-05-29 16:07:59]     "exeErrorDiag": "",
[2025-05-29 16:07:59]     "pilotErrorCode": 0,
[2025-05-29 16:07:59]     "pilotErrorDiag": "",
[2025-05-29 16:07:59]  *** Listing of results directory ***
[2025-05-29 16:07:59] total 414640
[2025-05-29 16:07:59] -rw-r--r-- 1 boinc boinc    495897 May 27 00:11 pilot3.tar.gz
[2025-05-29 16:07:59] -rw-r--r-- 1 boinc boinc      5111 May 27 01:08 queuedata.json
[2025-05-29 16:07:59] -rwx------ 1 boinc boinc     37140 May 27 01:11 runpilot2-wrapper.sh
[2025-05-29 16:07:59] -rw-rw-r-- 1 boinc boinc       100 May 29 13:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 16:07:59] -rwxr-xr-x 1 boinc boinc      7986 May 29 13:37 run_atlas
[2025-05-29 16:07:59] -rw-rw-r-- 1 boinc boinc       105 May 29 13:37 job.xml
[2025-05-29 16:07:59] -rw-rw-r-- 1 boinc boinc      6950 May 29 13:37 init_data.xml
[2025-05-29 16:07:59] -rw-r--r-- 2 boinc boinc 223474237 May 29 13:37 EVNT.44871834._002362.pool.root.1
[2025-05-29 16:07:59] -rw-r--r-- 2 boinc boinc     15093 May 29 13:37 start_atlas.sh
[2025-05-29 16:07:59] drwxrwx--x 2 boinc boinc      4096 May 29 13:37 shared
[2025-05-29 16:07:59] -rw-r--r-- 2 boinc boinc    508879 May 29 13:37 input.tar.gz
[2025-05-29 16:07:59] -rw-rw-r-- 1 boinc boinc         0 May 29 13:37 boinc_lockfile
[2025-05-29 16:07:59] -rw-rw-r-- 1 boinc boinc      2558 May 29 13:37 pandaJob.out
[2025-05-29 16:07:59] -rw------- 1 boinc boinc    992820 May 29 13:39 agis_schedconf.cvmfs.json
[2025-05-29 16:07:59] -rw------- 1 boinc boinc   1603667 May 29 13:39 agis_ddmendpoints.agis.ALL.json
[2025-05-29 16:07:59] drwx------ 4 boinc boinc      4096 May 29 13:39 pilot3
[2025-05-29 16:07:59] -rw------- 1 boinc boinc 194871902 May 29 16:05 HITS.44871837._059795.pool.root.1
[2025-05-29 16:07:59] -rw-rw-r-- 1 boinc boinc       530 May 29 16:05 boinc_task_state.xml
[2025-05-29 16:07:59] -rw------- 1 boinc boinc      1024 May 29 16:06 memory_monitor_summary.json
[2025-05-29 16:07:59] -rw------- 1 boinc boinc    404672 May 29 16:06 log.44871837._059795.job.log.tgz.1
[2025-05-29 16:07:59] -rw------- 1 boinc boinc        95 May 29 16:07 pilot_heartbeat.json
[2025-05-29 16:07:59] -rw------- 1 boinc boinc      7651 May 29 16:07 heartbeat.json
[2025-05-29 16:07:59] -rw-rw-r-- 1 boinc boinc        27 May 29 16:07 wrapper_checkpoint.txt
[2025-05-29 16:07:59] -rw-rw-r-- 1 boinc boinc      8192 May 29 16:07 boinc_mmap_file
[2025-05-29 16:07:59] -rw------- 1 boinc boinc      4378 May 29 16:07 pilotlog.txt
[2025-05-29 16:07:59] -rw------- 1 boinc boinc    791737 May 29 16:07 log.44871837._059795.job.log.1
[2025-05-29 16:07:59] -rw------- 1 boinc boinc       357 May 29 16:07 output.list
[2025-05-29 16:07:59] -rw-rw-r-- 1 boinc boinc       620 May 29 16:07 runtime_log
[2025-05-29 16:07:59] -rw------- 1 boinc boinc   1218560 May 29 16:07 result.tar.gz
[2025-05-29 16:07:59] -rw-rw-r-- 1 boinc boinc      8977 May 29 16:07 runtime_log.err
[2025-05-29 16:07:59] -rw------- 1 boinc boinc       652 May 29 16:07 SJtKDm21xd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmY8XKDmcoI3pm.diag
[2025-05-29 16:07:59] -rw-rw-r-- 1 boinc boinc     21264 May 29 16:07 stderr.txt
[2025-05-29 16:07:59] HITS file was successfully produced:
[2025-05-29 16:07:59] -rw------- 1 boinc boinc 194871902 May 29 16:05 shared/HITS.pool.root.1
[2025-05-29 16:07:59]  *** Contents of shared directory: ***
[2025-05-29 16:07:59] total 410264
[2025-05-29 16:07:59] -rw-r--r-- 2 boinc boinc 223474237 May 29 13:37 ATLAS.root_0
[2025-05-29 16:07:59] -rw-r--r-- 2 boinc boinc     15093 May 29 13:37 start_atlas.sh
[2025-05-29 16:07:59] -rw-r--r-- 2 boinc boinc    508879 May 29 13:37 input.tar.gz
[2025-05-29 16:07:59] -rw------- 1 boinc boinc 194871902 May 29 16:05 HITS.pool.root.1
[2025-05-29 16:07:59] -rw------- 1 boinc boinc   1218560 May 29 16:07 result.tar.gz
16:08:00 (1359126): run_atlas exited; CPU time 57625.834513
16:08:00 (1359126): called boinc_finish(0)

</stderr_txt>
]]>

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