Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:32:35 (1323888): wrapper (7.7.26015): starting
13:32:35 (1323888): wrapper: running run_atlas (--nthreads 12)
[2025-05-29 13:32:35] Arguments: --nthreads 12
[2025-05-29 13:32:35] Threads: 12
[2025-05-29 13:32:35] Checking for CVMFS
[2025-05-29 13:32:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 13:32:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 13:32:37] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 13:32:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 13:32:38] 2.12.7.0 39975 7550 181724 146563 3 187 3393286 4096000 16523 130560 0 77331585 99.999 1873656 1098 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-05-29 13:32:38] CVMFS is ok
[2025-05-29 13:32:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 13:32:38] Checking for apptainer binary...
[2025-05-29 13:32:38] apptainer is not installed, using version from CVMFS
[2025-05-29 13:32:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 13:32:39] epyc7v12
[2025-05-29 13:32:39] apptainer works
[2025-05-29 13:32:39] Set ATHENA_PROC_NUMBER=12
[2025-05-29 13:32:39] Set ATHENA_CORE_NUMBER=12
[2025-05-29 13:32:40] Starting ATLAS job with PandaID=6666579708
[2025-05-29 13:32:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 16:09:45]  *** The last 200 lines of the pilot log: ***
[2025-05-29 16:09:45] 2025-05-29 16:09:19,099 | INFO     | extracted standard memory fields from prmon json
[2025-05-29 16:09:45] 2025-05-29 16:09:19,099 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-29 16:09:45] 2025-05-29 16:09:19,099 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-29 16:09:45] 2025-05-29 16:09:19,100 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-29 16:09:45] 2025-05-29 16:09:19,107 | INFO     | fitting pss+swap vs Time
[2025-05-29 16:09:45] 2025-05-29 16:09:19,107 | INFO     | sum of square deviations: 1005179777.0
[2025-05-29 16:09:45] 2025-05-29 16:09:19,108 | INFO     | sum of deviations: 70888483354.5
[2025-05-29 16:09:45] 2025-05-29 16:09:19,108 | INFO     | mean x: 1748530396.5
[2025-05-29 16:09:45] 2025-05-29 16:09:19,108 | INFO     | mean y: 2523661.4797297297
[2025-05-29 16:09:45] 2025-05-29 16:09:19,108 | INFO     | -- intersect: -123309415897.29585
[2025-05-29 16:09:45] 2025-05-29 16:09:19,113 | INFO     | intersect: -123309415897.29585
[2025-05-29 16:09:45] 2025-05-29 16:09:19,113 | INFO     | chi2: 6.488798231344282
[2025-05-29 16:09:45] 2025-05-29 16:09:19,113 | INFO     | sum of square deviations: 906703512.0
[2025-05-29 16:09:45] 2025-05-29 16:09:19,114 | INFO     | sum of deviations: 78825607635.99998
[2025-05-29 16:09:45] 2025-05-29 16:09:19,114 | INFO     | mean x: 1748530244.0
[2025-05-29 16:09:45] 2025-05-29 16:09:19,115 | INFO     | mean y: 2535491.993006993
[2025-05-29 16:09:45] 2025-05-29 16:09:19,115 | INFO     | -- intersect: -152008521186.5029
[2025-05-29 16:09:45] 2025-05-29 16:09:19,115 | INFO     | intersect: -152008521186.5029
[2025-05-29 16:09:45] 2025-05-29 16:09:19,115 | INFO     | chi2: 5.71383610908048
[2025-05-29 16:09:45] 2025-05-29 16:09:19,115 | INFO     | current chi2=5.71383610908048 (change=11.943076277519769 %)
[2025-05-29 16:09:45] 2025-05-29 16:09:19,115 | INFO     | right removable region: 142
[2025-05-29 16:09:45] 2025-05-29 16:09:19,116 | INFO     | sum of square deviations: 906703512.0
[2025-05-29 16:09:45] 2025-05-29 16:09:19,121 | INFO     | sum of deviations: 20035836556.999992
[2025-05-29 16:09:45] 2025-05-29 16:09:19,121 | INFO     | mean x: 1748530549.0
[2025-05-29 16:09:45] 2025-05-29 16:09:19,121 | INFO     | mean y: 2602263.5664335666
[2025-05-29 16:09:45] 2025-05-29 16:09:19,121 | INFO     | -- intersect: -38635466113.83439
[2025-05-29 16:09:45] 2025-05-29 16:09:19,121 | INFO     | intersect: -38635466113.83439
[2025-05-29 16:09:45] 2025-05-29 16:09:19,121 | INFO     | chi2: 1.981115564083579
[2025-05-29 16:09:45] 2025-05-29 16:09:19,122 | INFO     | current chi2=1.981115564083579 (change=69.46868289857193 %)
[2025-05-29 16:09:45] 2025-05-29 16:09:19,122 | INFO     | sum of square deviations: 814878534.5
[2025-05-29 16:09:45] 2025-05-29 16:09:19,123 | INFO     | sum of deviations: -3715025171.999998
[2025-05-29 16:09:45] 2025-05-29 16:09:19,123 | INFO     | mean x: 1748530701.5
[2025-05-29 16:09:45] 2025-05-29 16:09:19,123 | INFO     | mean y: 2641422.5362318843
[2025-05-29 16:09:45] 2025-05-29 16:09:19,123 | INFO     | -- intersect: 7974179872.831875
[2025-05-29 16:09:45] 2025-05-29 16:09:19,123 | INFO     | intersect: 7974179872.831875
[2025-05-29 16:09:45] 2025-05-29 16:09:19,123 | INFO     | chi2: 0.9724141016615098
[2025-05-29 16:09:45] 2025-05-29 16:09:19,123 | INFO     | current chi2=0.9724141016615098 (change=50.91583149964664 %)
[2025-05-29 16:09:45] 2025-05-29 16:09:19,124 | INFO     | sum of square deviations: 729472282.0
[2025-05-29 16:09:45] 2025-05-29 16:09:19,124 | INFO     | sum of deviations: -10070111800.0
[2025-05-29 16:09:45] 2025-05-29 16:09:19,129 | INFO     | mean x: 1748530854.0
[2025-05-29 16:09:45] 2025-05-29 16:09:19,129 | INFO     | mean y: 2652614.7819548873
[2025-05-29 16:09:45] 2025-05-29 16:09:19,129 | INFO     | -- intersect: 24140514491.115013
[2025-05-29 16:09:45] 2025-05-29 16:09:19,129 | INFO     | intersect: 24140514491.115013
[2025-05-29 16:09:45] 2025-05-29 16:09:19,129 | INFO     | chi2: 0.8699399482667594
[2025-05-29 16:09:45] 2025-05-29 16:09:19,129 | INFO     | current chi2=0.8699399482667594 (change=10.538118813750081 %)
[2025-05-29 16:09:45] 2025-05-29 16:09:19,129 | INFO     | left removable region: 30
[2025-05-29 16:09:45] 2025-05-29 16:09:19,130 | INFO     | sum of square deviations: 435610028.0
[2025-05-29 16:09:45] 2025-05-29 16:09:19,130 | INFO     | sum of deviations: 1090159029.5
[2025-05-29 16:09:45] 2025-05-29 16:09:19,130 | INFO     | mean x: 1748531128.5
[2025-05-29 16:09:45] 2025-05-29 16:09:19,131 | INFO     | mean y: 2667383.1875
[2025-05-29 16:09:45] 2025-05-29 16:09:19,131 | INFO     | -- intersect: -4373212131.909658
[2025-05-29 16:09:45] 2025-05-29 16:09:19,131 | INFO     | intersect: -4373212131.909658
[2025-05-29 16:09:45] 2025-05-29 16:09:19,131 | INFO     | chi2: 9.595221383844773e-05
[2025-05-29 16:09:45] 2025-05-29 16:09:19,131 | INFO     | -- intersect: -4373212131.909658
[2025-05-29 16:09:45] 2025-05-29 16:09:19,131 | INFO     | current memory leak: 2.50 B/s (using 112 data points, chi2=0.00)
[2025-05-29 16:09:45] 2025-05-29 16:09:19,132 | INFO     | ..............................
[2025-05-29 16:09:45] 2025-05-29 16:09:19,132 | INFO     | . Timing measurements:
[2025-05-29 16:09:45] 2025-05-29 16:09:19,132 | INFO     | . get job = 0 s
[2025-05-29 16:09:45] 2025-05-29 16:09:19,132 | INFO     | . initial setup = 8 s
[2025-05-29 16:09:45] 2025-05-29 16:09:19,132 | INFO     | . payload setup = 86 s
[2025-05-29 16:09:45] 2025-05-29 16:09:19,137 | INFO     | . stage-in = 0 s
[2025-05-29 16:09:45] 2025-05-29 16:09:19,137 | INFO     | . payload execution = 9036 s
[2025-05-29 16:09:45] 2025-05-29 16:09:19,137 | INFO     | . stage-out = 2 s
[2025-05-29 16:09:45] 2025-05-29 16:09:19,137 | INFO     | . log creation = 0 s
[2025-05-29 16:09:45] 2025-05-29 16:09:19,137 | INFO     | ..............................
[2025-05-29 16:09:45] 2025-05-29 16:09:19,370 | INFO     | 
[2025-05-29 16:09:45] 2025-05-29 16:09:19,370 | INFO     | job summary report
[2025-05-29 16:09:45] 2025-05-29 16:09:19,370 | INFO     | --------------------------------------------------
[2025-05-29 16:09:45] 2025-05-29 16:09:19,370 | INFO     | PanDA job id: 6666579708
[2025-05-29 16:09:45] 2025-05-29 16:09:19,371 | INFO     | task id: 44871837
[2025-05-29 16:09:45] 2025-05-29 16:09:19,371 | INFO     | errors: (none)
[2025-05-29 16:09:45] 2025-05-29 16:09:19,371 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 16:09:45] 2025-05-29 16:09:19,371 | INFO     | pilot state: finished 
[2025-05-29 16:09:45] 2025-05-29 16:09:19,371 | INFO     | transexitcode: 0
[2025-05-29 16:09:45] 2025-05-29 16:09:19,371 | INFO     | exeerrorcode: 0
[2025-05-29 16:09:45] 2025-05-29 16:09:19,371 | INFO     | exeerrordiag: 
[2025-05-29 16:09:45] 2025-05-29 16:09:19,371 | INFO     | exitcode: 0
[2025-05-29 16:09:45] 2025-05-29 16:09:19,371 | INFO     | exitmsg: OK
[2025-05-29 16:09:45] 2025-05-29 16:09:19,371 | INFO     | cpuconsumptiontime: 59276 s
[2025-05-29 16:09:45] 2025-05-29 16:09:19,372 | INFO     | nevents: 400
[2025-05-29 16:09:45] 2025-05-29 16:09:19,372 | INFO     | neventsw: 0
[2025-05-29 16:09:45] 2025-05-29 16:09:19,372 | INFO     | pid: 1359825
[2025-05-29 16:09:45] 2025-05-29 16:09:19,372 | INFO     | pgrp: 1359825
[2025-05-29 16:09:45] 2025-05-29 16:09:19,372 | INFO     | corecount: 12
[2025-05-29 16:09:45] 2025-05-29 16:09:19,372 | INFO     | event service: False
[2025-05-29 16:09:45] 2025-05-29 16:09:19,372 | INFO     | sizes: {0: 2405031, 1: 2405115, 2: 2405314, 13: 2405314, 24: 2405370, 35: 2405398, 46: 2405554, 54: 2405788, 56: 2405816, 9126: 2433997, 9127: 2433996, 9129: 24433
[2025-05-29 16:09:45] 2025-05-29 16:09:19,372 | INFO     | --------------------------------------------------
[2025-05-29 16:09:45] 2025-05-29 16:09:19,372 | INFO     | 
[2025-05-29 16:09:45] 2025-05-29 16:09:19,373 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/17
[2025-05-29 16:09:45] 2025-05-29 16:09:19,629 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 16:09:45] 2025-05-29 16:09:19,629 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 16:09:45] 2025-05-29 16:09:19,629 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 16:09:45] 2025-05-29 16:09:19,630 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 16:09:45] 2025-05-29 16:09:19,630 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 16:09:45] 2025-05-29 16:09:19,630 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 16:09:45] 2025-05-29 16:09:19,630 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 16:09:45] 2025-05-29 16:09:19,630 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 16:09:45] 2025-05-29 16:09:19,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 16:09:45] 2025-05-29 16:09:19,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 16:09:45] 2025-05-29 16:09:19,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 16:09:45] 2025-05-29 16:09:19,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 16:09:45] 2025-05-29 16:09:19,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 16:09:45] 2025-05-29 16:09:19,631 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 16:09:45] 2025-05-29 16:09:19,631 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 16:09:45] 2025-05-29 16:09:19,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 16:09:45] 2025-05-29 16:09:19,631 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 16:09:45] 2025-05-29 16:09:19,631 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 16:09:45] 2025-05-29 16:09:19,631 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 16:09:45] 2025-05-29 16:09:19,631 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 16:09:45] 2025-05-29 16:09:19,631 | INFO     | job 6666579708 has completed (purged errors)
[2025-05-29 16:09:45] 2025-05-29 16:09:19,631 | INFO     | overall cleanup function is called
[2025-05-29 16:09:45] 2025-05-29 16:09:20,645 | INFO     | --- collectZombieJob: --- 10, [1359825]
[2025-05-29 16:09:45] 2025-05-29 16:09:20,645 | INFO     | zombie collector waiting for pid 1359825
[2025-05-29 16:09:45] 2025-05-29 16:09:20,645 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 16:09:45] 2025-05-29 16:09:20,645 | INFO     | collected zombie processes
[2025-05-29 16:09:45] 2025-05-29 16:09:20,645 | INFO     | will attempt to kill all subprocesses of pid=1359825
[2025-05-29 16:09:45] 2025-05-29 16:09:21,905 | INFO     | process IDs to be killed: [1359825] (in reverse order)
[2025-05-29 16:09:45] 2025-05-29 16:09:23,513 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 16:09:45] 2025-05-29 16:09:23,513 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 16:09:45] 2025-05-29 16:09:23,547 | INFO     | did not find any defunct processes belonging to 1359825
[2025-05-29 16:09:45] 2025-05-29 16:09:23,585 | INFO     | did not find any defunct processes belonging to 1359825
[2025-05-29 16:09:45] 2025-05-29 16:09:23,585 | INFO     | ready for new job
[2025-05-29 16:09:45] 2025-05-29 16:09:23,585 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 16:09:45] 2025-05-29 16:09:23,587 | INFO     | **************************************
[2025-05-29 16:09:45] 2025-05-29 16:09:23,587 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 16:09:45] 2025-05-29 16:09:23,588 | INFO     | **************************************
[2025-05-29 16:09:45] 2025-05-29 16:09:23,588 | INFO     | 
[2025-05-29 16:09:45] 2025-05-29 16:09:23,623 | INFO     | architecture information:
[2025-05-29 16:09:45] 2025-05-29 16:09:23,641 | INFO     | executing command: cat /etc/os-release
[2025-05-29 16:09:45] 2025-05-29 16:09:23,785 | INFO     | cat /etc/os-release:
[2025-05-29 16:09:45] NAME="CentOS Linux"
[2025-05-29 16:09:45] VERSION="7 (Core)"
[2025-05-29 16:09:45] ID="centos"
[2025-05-29 16:09:45] ID_LIKE="rhel fedora"
[2025-05-29 16:09:45] VERSION_ID="7"
[2025-05-29 16:09:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 16:09:45] ANSI_COLOR="0;31"
[2025-05-29 16:09:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 16:09:45] HOME_URL="https://www.centos.org/"
[2025-05-29 16:09:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 16:09:45] 
[2025-05-29 16:09:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 16:09:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 16:09:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 16:09:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 16:09:45] 
[2025-05-29 16:09:45] 2025-05-29 16:09:23,786 | INFO     | **************************************
[2025-05-29 16:09:45] 2025-05-29 16:09:24,301 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/17
[2025-05-29 16:09:45] 2025-05-29 16:09:24,449 | INFO     | sufficient remaining disk space (312746180608 B)
[2025-05-29 16:09:45] 2025-05-29 16:09:24,450 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 16:09:45] 2025-05-29 16:09:24,450 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 16:09:45] 2025-05-29 16:09:24,450 | INFO     | update_server=False
[2025-05-29 16:09:45] 2025-05-29 16:09:24,450 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 16:09:45] 2025-05-29 16:09:24,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 16:09:45] 2025-05-29 16:09:24,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 16:09:45] 2025-05-29 16:09:24,453 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 16:09:45] 2025-05-29 16:09:24,581 | INFO     | all data control threads have been joined
[2025-05-29 16:09:45] 2025-05-29 16:09:24,642 | INFO     | PID=1334959 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-05-29 16:09:45] 2025-05-29 16:09:24,642 | INFO     | .. there are 19 such processes running
[2025-05-29 16:09:45] 2025-05-29 16:09:24,642 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 16:09:45] 2025-05-29 16:09:24,643 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 16:09:45] 2025-05-29 16:09:24,643 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 16:09:45] 2025-05-29 16:09:24,865 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 16:09:45] 2025-05-29 16:09:24,865 | INFO     | aborting loop
[2025-05-29 16:09:45] 2025-05-29 16:09:25,431 | INFO     | all payload control threads have been joined
[2025-05-29 16:09:45] 2025-05-29 16:09:25,457 | INFO     | [job] retrieve thread has finished
[2025-05-29 16:09:45] 2025-05-29 16:09:25,461 | INFO     | [job] queue monitor thread has finished
[2025-05-29 16:09:45] 2025-05-29 16:09:25,589 | INFO     | [data] control thread has finished
[2025-05-29 16:09:45] 2025-05-29 16:09:25,589 | INFO     | [payload] validate_post thread has finished
[2025-05-29 16:09:45] 2025-05-29 16:09:25,713 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 16:09:45] 2025-05-29 16:09:25,801 | INFO     | [data] copytool_in thread has finished
[2025-05-29 16:09:45] 2025-05-29 16:09:25,873 | INFO     | [job] job monitor thread has finished
[2025-05-29 16:09:45] 2025-05-29 16:09:26,137 | INFO     | all job control threads have been joined
[2025-05-29 16:09:45] 2025-05-29 16:09:26,269 | INFO     | [job] validate thread has finished
[2025-05-29 16:09:45] 2025-05-29 16:09:26,437 | INFO     | [payload] control thread has finished
[2025-05-29 16:09:45] 2025-05-29 16:09:26,457 | INFO     | [data] copytool_out thread has finished
[2025-05-29 16:09:45] 2025-05-29 16:09:26,757 | INFO     | [payload] failed_post thread has finished
[2025-05-29 16:09:45] 2025-05-29 16:09:26,757 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 16:09:45] 2025-05-29 16:09:26,769 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 16:09:45] 2025-05-29 16:09:27,141 | INFO     | [job] control thread has finished
[2025-05-29 16:09:45] 2025-05-29 16:09:28,469 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 16:09:45] 2025-05-29 16:09:35,125 | INFO     | job.realtimelogging is not enabled
[2025-05-29 16:09:45] 2025-05-29 16:09:36,133 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 16:09:45] 2025-05-29 16:09:38,009 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140416053061440)>', '<ExcThread(monitor, started 140415609063168)>']
[2025-05-29 16:09:45] 2025-05-29 16:09:38,725 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 16:09:45] 2025-05-29 16:09:38,725 | INFO     | [monitor] control thread has ended
[2025-05-29 16:09:45] 2025-05-29 16:09:43,037 | INFO     | all workflow threads have been joined
[2025-05-29 16:09:45] 2025-05-29 16:09:43,037 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 16:09:45] 2025-05-29 16:09:43,037 | INFO     | traces error code: 0
[2025-05-29 16:09:45] 2025-05-29 16:09:43,038 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 16:09:45] 2025-05-29 16:09:43,433 [wrapper] ==== pilot stdout END ====
[2025-05-29 16:09:45] 2025-05-29 16:09:43,469 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 16:09:45] 2025-05-29 16:09:43,513 [wrapper] pilotpid: 1334959
[2025-05-29 16:09:45] 2025-05-29 16:09:43,565 [wrapper] Pilot exit status: 0
[2025-05-29 16:09:45] 2025-05-29 16:09:43,741 [wrapper] pandaids: 6666579708
[2025-05-29 16:09:45] 2025-05-29 16:09:44,201 [wrapper] cleanup supervisor_pilot 1934166 1334960
[2025-05-29 16:09:45] 2025-05-29 16:09:44,234 [wrapper] Test setup, not cleaning
[2025-05-29 16:09:45] 2025-05-29 16:09:44,254 [wrapper] apfmon messages muted
[2025-05-29 16:09:45] 2025-05-29 16:09:44,293 [wrapper] ==== wrapper stdout END ====
[2025-05-29 16:09:45] 2025-05-29 16:09:44,321 [wrapper] ==== wrapper stderr END ====
[2025-05-29 16:09:45]  *** Error codes and diagnostics ***
[2025-05-29 16:09:45]     "exeErrorCode": 0,
[2025-05-29 16:09:45]     "exeErrorDiag": "",
[2025-05-29 16:09:45]     "pilotErrorCode": 0,
[2025-05-29 16:09:45]     "pilotErrorDiag": "",
[2025-05-29 16:09:45]  *** Listing of results directory ***
[2025-05-29 16:09:45] total 420712
[2025-05-29 16:09:45] -rw-r--r-- 1 boinc boinc    495897 May 27 00:11 pilot3.tar.gz
[2025-05-29 16:09:45] -rw-r--r-- 1 boinc boinc      5111 May 27 00:32 queuedata.json
[2025-05-29 16:09:45] -rwx------ 1 boinc boinc     37140 May 27 00:33 runpilot2-wrapper.sh
[2025-05-29 16:09:45] -rw-rw-r-- 1 boinc boinc       100 May 29 13:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 16:09:45] -rwxr-xr-x 1 boinc boinc      7986 May 29 13:32 run_atlas
[2025-05-29 16:09:45] -rw-rw-r-- 1 boinc boinc       105 May 29 13:32 job.xml
[2025-05-29 16:09:45] -rw-r--r-- 2 boinc boinc     15093 May 29 13:32 start_atlas.sh
[2025-05-29 16:09:45] drwxrwx--x 2 boinc boinc      4096 May 29 13:32 shared
[2025-05-29 16:09:45] -rw-r--r-- 2 boinc boinc    508876 May 29 13:32 input.tar.gz
[2025-05-29 16:09:45] -rw-rw-r-- 1 boinc boinc      6950 May 29 13:32 init_data.xml
[2025-05-29 16:09:45] -rw-r--r-- 2 boinc boinc 227369534 May 29 13:32 EVNT.44871834._002350.pool.root.1
[2025-05-29 16:09:45] -rw-rw-r-- 1 boinc boinc         0 May 29 13:32 boinc_lockfile
[2025-05-29 16:09:45] -rw-rw-r-- 1 boinc boinc      2559 May 29 13:32 pandaJob.out
[2025-05-29 16:09:45] -rw------- 1 boinc boinc    992820 May 29 13:34 agis_schedconf.cvmfs.json
[2025-05-29 16:09:45] -rw------- 1 boinc boinc   1603667 May 29 13:34 agis_ddmendpoints.agis.ALL.json
[2025-05-29 16:09:45] drwx------ 4 boinc boinc      4096 May 29 13:34 pilot3
[2025-05-29 16:09:45] -rw------- 1 boinc boinc 197131462 May 29 16:07 HITS.44871837._059483.pool.root.1
[2025-05-29 16:09:45] -rw-rw-r-- 1 boinc boinc       530 May 29 16:07 boinc_task_state.xml
[2025-05-29 16:09:45] -rw------- 1 boinc boinc      1024 May 29 16:08 memory_monitor_summary.json
[2025-05-29 16:09:45] -rw------- 1 boinc boinc    402207 May 29 16:08 log.44871837._059483.job.log.tgz.1
[2025-05-29 16:09:45] -rw------- 1 boinc boinc        95 May 29 16:08 pilot_heartbeat.json
[2025-05-29 16:09:45] -rw------- 1 boinc boinc      7648 May 29 16:09 heartbeat.json
[2025-05-29 16:09:45] -rw-rw-r-- 1 boinc boinc      8192 May 29 16:09 boinc_mmap_file
[2025-05-29 16:09:45] -rw-rw-r-- 1 boinc boinc        27 May 29 16:09 wrapper_checkpoint.txt
[2025-05-29 16:09:45] -rw------- 1 boinc boinc      4845 May 29 16:09 pilotlog.txt
[2025-05-29 16:09:45] -rw------- 1 boinc boinc    828740 May 29 16:09 log.44871837._059483.job.log.1
[2025-05-29 16:09:45] -rw------- 1 boinc boinc       357 May 29 16:09 output.list
[2025-05-29 16:09:45] -rw-rw-r-- 1 boinc boinc       620 May 29 16:09 runtime_log
[2025-05-29 16:09:45] -rw------- 1 boinc boinc   1249280 May 29 16:09 result.tar.gz
[2025-05-29 16:09:45] -rw-rw-r-- 1 boinc boinc      8977 May 29 16:09 runtime_log.err
[2025-05-29 16:09:45] -rw------- 1 boinc boinc       652 May 29 16:09 NohKDm4Qxd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmo4XKDm5KBTMm.diag
[2025-05-29 16:09:45] -rw-rw-r-- 1 boinc boinc     20684 May 29 16:09 stderr.txt
[2025-05-29 16:09:45] HITS file was successfully produced:
[2025-05-29 16:09:45] -rw------- 1 boinc boinc 197131462 May 29 16:07 shared/HITS.pool.root.1
[2025-05-29 16:09:45]  *** Contents of shared directory: ***
[2025-05-29 16:09:45] total 416300
[2025-05-29 16:09:45] -rw-r--r-- 2 boinc boinc     15093 May 29 13:32 start_atlas.sh
[2025-05-29 16:09:45] -rw-r--r-- 2 boinc boinc    508876 May 29 13:32 input.tar.gz
[2025-05-29 16:09:45] -rw-r--r-- 2 boinc boinc 227369534 May 29 13:32 ATLAS.root_0
[2025-05-29 16:09:45] -rw------- 1 boinc boinc 197131462 May 29 16:07 HITS.pool.root.1
[2025-05-29 16:09:45] -rw------- 1 boinc boinc   1249280 May 29 16:09 result.tar.gz
16:09:46 (1323888): run_atlas exited; CPU time 59781.420997
16:09:46 (1323888): called boinc_finish(0)

</stderr_txt>
]]>

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