Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:55:38 (2416778): wrapper (7.7.26015): starting
19:55:38 (2416778): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 19:55:38] Arguments: --nthreads 4
[2025-06-03 19:55:38] Threads: 4
[2025-06-03 19:55:38] Checking for CVMFS
[2025-06-03 19:55:38] No cvmfs_config command found, will try listing directly
[2025-06-03 19:55:38] CVMFS is ok
[2025-06-03 19:55:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 19:55:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 19:55:38] Further information can be found at the LHC@home message board.
[2025-06-03 19:55:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 19:55:38] Checking for apptainer binary...
[2025-06-03 19:55:38] which: no apptainer in ((null))
[2025-06-03 19:55:38] apptainer is not installed, using version from CVMFS
[2025-06-03 19:55:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 19:55:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-06-03 19:55:39] apptainer works
[2025-06-03 19:55:39] Set ATHENA_PROC_NUMBER=4
[2025-06-03 19:55:39] Set ATHENA_CORE_NUMBER=4
[2025-06-03 19:55:39] Starting ATLAS job with PandaID=6669237618
[2025-06-03 19:55:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:56:21]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:56:21] 2025-06-03 21:52:51,477 | INFO     | executing command: lscpu
[2025-06-03 23:56:21] 2025-06-03 21:52:51,543 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 23:56:21] 2025-06-03 21:52:52,364 | INFO     | monitor loop #1024: job 0:6669237618 is in state 'finished'
[2025-06-03 23:56:21] 2025-06-03 21:52:52,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:56:21] 2025-06-03 21:52:54,868 | INFO     | monitor loop #1025: job 0:6669237618 is in state 'finished'
[2025-06-03 23:56:21] 2025-06-03 21:52:54,868 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:56:21] 2025-06-03 21:52:56,656 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 23:56:21] 2025-06-03 21:52:56,656 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6669237618/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:56:21] 2025-06-03 21:52:56,657 | INFO     | extracted standard info from prmon json
[2025-06-03 23:56:21] 2025-06-03 21:52:56,657 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:56:21] 2025-06-03 21:52:56,657 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:56:21] 2025-06-03 21:52:56,658 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:56:21] 2025-06-03 21:52:56,658 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:56:21] 2025-06-03 21:52:56,663 | INFO     | fitting pss+swap vs Time
[2025-06-03 23:56:21] 2025-06-03 21:52:56,664 | INFO     | sum of square deviations: 3922276332.0
[2025-06-03 23:56:21] 2025-06-03 21:52:56,665 | INFO     | sum of deviations: -2880543098.0000005
[2025-06-03 23:56:21] 2025-06-03 21:52:56,666 | INFO     | mean x: 1748980455.0
[2025-06-03 23:56:21] 2025-06-03 21:52:56,666 | INFO     | mean y: 2358238.321888412
[2025-06-03 23:56:21] 2025-06-03 21:52:56,666 | INFO     | -- intersect: 1286819900.8224056
[2025-06-03 23:56:21] 2025-06-03 21:52:56,666 | INFO     | intersect: 1286819900.8224056
[2025-06-03 23:56:21] 2025-06-03 21:52:56,666 | INFO     | chi2: 1.527244904368796
[2025-06-03 23:56:21] 2025-06-03 21:52:56,667 | INFO     | sum of square deviations: 3675146117.0
[2025-06-03 23:56:21] 2025-06-03 21:52:56,668 | INFO     | sum of deviations: -2439253543.000004
[2025-06-03 23:56:21] 2025-06-03 21:52:56,669 | INFO     | mean x: 1748980302.5
[2025-06-03 23:56:21] 2025-06-03 21:52:56,669 | INFO     | mean y: 2358510.6754385964
[2025-06-03 23:56:21] 2025-06-03 21:52:56,669 | INFO     | -- intersect: 1163184846.1988878
[2025-06-03 23:56:21] 2025-06-03 21:52:56,669 | INFO     | intersect: 1163184846.1988878
[2025-06-03 23:56:21] 2025-06-03 21:52:56,669 | INFO     | chi2: 1.5275980188985048
[2025-06-03 23:56:21] 2025-06-03 21:52:56,669 | INFO     | current chi2=1.5275980188985048 (change=-0.023121015411396405 %)
[2025-06-03 23:56:21] 2025-06-03 21:52:56,669 | INFO     | right removable region: 227
[2025-06-03 23:56:21] 2025-06-03 21:52:56,670 | INFO     | sum of square deviations: 3675146117.0
[2025-06-03 23:56:21] 2025-06-03 21:52:56,671 | INFO     | sum of deviations: -36590110832.5
[2025-06-03 23:56:21] 2025-06-03 21:52:56,672 | INFO     | mean x: 1748980607.5
[2025-06-03 23:56:21] 2025-06-03 21:52:56,672 | INFO     | mean y: 2378829.9078947366
[2025-06-03 23:56:21] 2025-06-03 21:52:56,672 | INFO     | -- intersect: 17415399220.116825
[2025-06-03 23:56:21] 2025-06-03 21:52:56,672 | INFO     | intersect: 17415399220.116825
[2025-06-03 23:56:21] 2025-06-03 21:52:56,672 | INFO     | chi2: 0.04195720731903134
[2025-06-03 23:56:21] 2025-06-03 21:52:56,673 | INFO     | current chi2=0.04195720731903134 (change=97.25275185407332 %)
[2025-06-03 23:56:21] 2025-06-03 21:52:56,673 | INFO     | sum of square deviations: 3438620752.0
[2025-06-03 23:56:21] 2025-06-03 21:52:56,675 | INFO     | sum of deviations: -34766491280.0
[2025-06-03 23:56:21] 2025-06-03 21:52:56,675 | INFO     | mean x: 1748980760.0
[2025-06-03 23:56:21] 2025-06-03 21:52:56,675 | INFO     | mean y: 2377657.085201794
[2025-06-03 23:56:21] 2025-06-03 21:52:56,675 | INFO     | -- intersect: 17685608442.585846
[2025-06-03 23:56:21] 2025-06-03 21:52:56,675 | INFO     | intersect: 17685608442.585846
[2025-06-03 23:56:21] 2025-06-03 21:52:56,676 | INFO     | chi2: 0.041554215450198516
[2025-06-03 23:56:21] 2025-06-03 21:52:56,676 | INFO     | current chi2=0.041554215450198516 (change=0.9604830602012702 %)
[2025-06-03 23:56:21] 2025-06-03 21:52:56,676 | INFO     | left removable region: 20
[2025-06-03 23:56:21] 2025-06-03 21:52:56,677 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 23:56:21] 2025-06-03 21:52:56,678 | INFO     | sum of deviations: -29669524589.000004
[2025-06-03 23:56:21] 2025-06-03 21:52:56,678 | INFO     | mean x: 1748980882.0
[2025-06-03 23:56:21] 2025-06-03 21:52:56,678 | INFO     | mean y: 2375757.9420289854
[2025-06-03 23:56:21] 2025-06-03 21:52:56,678 | INFO     | -- intersect: 18869961180.71497
[2025-06-03 23:56:21] 2025-06-03 21:52:56,679 | INFO     | intersect: 18869961180.71497
[2025-06-03 23:56:21] 2025-06-03 21:52:56,679 | INFO     | chi2: 0.0398543322474963
[2025-06-03 23:56:21] 2025-06-03 21:52:56,679 | INFO     | -- intersect: 18869961180.71497
[2025-06-03 23:56:21] 2025-06-03 21:52:56,679 | INFO     | current memory leak: -10.79 B/s (using 207 data points, chi2=0.04)
[2025-06-03 23:56:21] 2025-06-03 21:52:56,680 | INFO     | ..............................
[2025-06-03 23:56:21] 2025-06-03 21:52:56,680 | INFO     | . Timing measurements:
[2025-06-03 23:56:21] 2025-06-03 21:52:56,680 | INFO     | . get job = 0 s
[2025-06-03 23:56:21] 2025-06-03 21:52:56,680 | INFO     | . initial setup = 1 s
[2025-06-03 23:56:21] 2025-06-03 21:52:56,680 | INFO     | . payload setup = 7 s
[2025-06-03 23:56:21] 2025-06-03 21:52:56,680 | INFO     | . stage-in = 0 s
[2025-06-03 23:56:21] 2025-06-03 21:52:56,680 | INFO     | . payload execution = 14189 s
[2025-06-03 23:56:21] 2025-06-03 21:52:56,681 | INFO     | . stage-out = 1 s
[2025-06-03 23:56:21] 2025-06-03 21:52:56,681 | INFO     | . log creation = 0 s
[2025-06-03 23:56:21] 2025-06-03 21:52:56,681 | INFO     | ..............................
[2025-06-03 23:56:21] 2025-06-03 21:52:57,272 | INFO     | 
[2025-06-03 23:56:21] 2025-06-03 21:52:57,272 | INFO     | job summary report
[2025-06-03 23:56:21] 2025-06-03 21:52:57,272 | INFO     | --------------------------------------------------
[2025-06-03 23:56:21] 2025-06-03 21:52:57,273 | INFO     | PanDA job id: 6669237618
[2025-06-03 23:56:21] 2025-06-03 21:52:57,273 | INFO     | task id: 44871837
[2025-06-03 23:56:21] 2025-06-03 21:52:57,273 | INFO     | errors: (none)
[2025-06-03 23:56:21] 2025-06-03 21:52:57,273 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:56:21] 2025-06-03 21:52:57,273 | INFO     | pilot state: finished 
[2025-06-03 23:56:21] 2025-06-03 21:52:57,273 | INFO     | transexitcode: 0
[2025-06-03 23:56:21] 2025-06-03 21:52:57,273 | INFO     | exeerrorcode: 0
[2025-06-03 23:56:21] 2025-06-03 21:52:57,273 | INFO     | exeerrordiag: 
[2025-06-03 23:56:21] 2025-06-03 21:52:57,273 | INFO     | exitcode: 0
[2025-06-03 23:56:21] 2025-06-03 21:52:57,273 | INFO     | exitmsg: OK
[2025-06-03 23:56:21] 2025-06-03 21:52:57,273 | INFO     | cpuconsumptiontime: 54577 s
[2025-06-03 23:56:21] 2025-06-03 21:52:57,274 | INFO     | nevents: 400
[2025-06-03 23:56:21] 2025-06-03 21:52:57,274 | INFO     | neventsw: 0
[2025-06-03 23:56:21] 2025-06-03 21:52:57,274 | INFO     | pid: 2428923
[2025-06-03 23:56:21] 2025-06-03 21:52:57,274 | INFO     | pgrp: 2428923
[2025-06-03 23:56:21] 2025-06-03 21:52:57,274 | INFO     | corecount: 4
[2025-06-03 23:56:21] 2025-06-03 21:52:57,274 | INFO     | event service: False
[2025-06-03 23:56:21] 2025-06-03 21:52:57,274 | INFO     | sizes: {0: 2405018, 1: 2405273, 6: 2405479, 12: 2405507, 14200: 2435557, 14201: 2435556, 14202: 2444759, 14210: 2444873}
[2025-06-03 23:56:21] 2025-06-03 21:52:57,274 | INFO     | --------------------------------------------------
[2025-06-03 23:56:21] 2025-06-03 21:52:57,274 | INFO     | 
[2025-06-03 23:56:21] 2025-06-03 21:52:57,274 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2025-06-03 23:56:21] 2025-06-03 21:52:57,297 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:56:21] 2025-06-03 21:52:57,298 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:56:21] 2025-06-03 21:52:57,298 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:56:21] 2025-06-03 21:52:57,298 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:56:21] 2025-06-03 21:52:57,298 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:56:21] 2025-06-03 21:52:57,298 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:56:21] 2025-06-03 21:52:57,298 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:56:21] 2025-06-03 21:52:57,298 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:56:21] 2025-06-03 21:52:57,298 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:56:21] 2025-06-03 21:52:57,298 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:56:21] 2025-06-03 21:52:57,299 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:56:21] 2025-06-03 21:52:57,299 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:56:21] 2025-06-03 21:52:57,299 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:56:21] 2025-06-03 21:52:57,299 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:56:21] 2025-06-03 21:52:57,299 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:56:21] 2025-06-03 21:52:57,299 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:56:21] 2025-06-03 21:52:57,299 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:56:21] 2025-06-03 21:52:57,299 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:56:21] 2025-06-03 21:52:57,299 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:56:21] 2025-06-03 21:52:57,299 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:56:21] 2025-06-03 21:52:57,300 | INFO     | job 6669237618 has completed (purged errors)
[2025-06-03 23:56:21] 2025-06-03 21:52:57,300 | INFO     | overall cleanup function is called
[2025-06-03 23:56:21] 2025-06-03 21:52:58,305 | INFO     | --- collectZombieJob: --- 10, [2428923]
[2025-06-03 23:56:21] 2025-06-03 21:52:58,305 | INFO     | zombie collector waiting for pid 2428923
[2025-06-03 23:56:21] 2025-06-03 21:52:58,305 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:56:21] 2025-06-03 21:52:58,306 | INFO     | collected zombie processes
[2025-06-03 23:56:21] 2025-06-03 21:52:58,306 | INFO     | will attempt to kill all subprocesses of pid=2428923
[2025-06-03 23:56:21] 2025-06-03 21:52:58,725 | INFO     | process IDs to be killed: [2428923] (in reverse order)
[2025-06-03 23:56:21] 2025-06-03 21:52:58,839 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:56:21] 2025-06-03 21:52:58,839 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:56:21] 2025-06-03 21:52:58,853 | INFO     | did not find any defunct processes belonging to 2428923
[2025-06-03 23:56:21] 2025-06-03 21:52:58,865 | INFO     | did not find any defunct processes belonging to 2428923
[2025-06-03 23:56:21] 2025-06-03 21:52:58,865 | INFO     | ready for new job
[2025-06-03 23:56:21] 2025-06-03 21:52:58,865 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:56:21] 2025-06-03 21:52:58,868 | INFO     | **************************************
[2025-06-03 23:56:21] 2025-06-03 21:52:58,868 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:56:21] 2025-06-03 21:52:58,868 | INFO     | **************************************
[2025-06-03 23:56:21] 2025-06-03 21:52:58,868 | INFO     | 
[2025-06-03 23:56:21] 2025-06-03 21:52:58,873 | INFO     | architecture information:
[2025-06-03 23:56:21] 2025-06-03 21:52:58,873 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:56:21] 2025-06-03 21:52:58,890 | INFO     | cat /etc/os-release:
[2025-06-03 23:56:21] NAME="CentOS Linux"
[2025-06-03 23:56:21] VERSION="7 (Core)"
[2025-06-03 23:56:21] ID="centos"
[2025-06-03 23:56:21] ID_LIKE="rhel fedora"
[2025-06-03 23:56:21] VERSION_ID="7"
[2025-06-03 23:56:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:56:21] ANSI_COLOR="0;31"
[2025-06-03 23:56:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:56:21] HOME_URL="https://www.centos.org/"
[2025-06-03 23:56:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:56:21] 
[2025-06-03 23:56:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:56:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:56:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:56:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:56:21] 
[2025-06-03 23:56:21] 2025-06-03 21:52:58,890 | INFO     | **************************************
[2025-06-03 23:56:21] 2025-06-03 21:52:59,392 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2025-06-03 23:56:21] 2025-06-03 21:52:59,410 | INFO     | sufficient remaining disk space (641214709760 B)
[2025-06-03 23:56:21] 2025-06-03 21:52:59,411 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:56:21] 2025-06-03 21:52:59,411 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:56:21] 2025-06-03 21:52:59,411 | INFO     | update_server=False
[2025-06-03 23:56:21] 2025-06-03 21:52:59,411 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:56:21] 2025-06-03 21:52:59,411 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:56:21] 2025-06-03 21:52:59,437 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:56:21] 2025-06-03 21:52:59,692 | INFO     | all data control threads have been joined
[2025-06-03 23:56:21] 2025-06-03 21:52:59,878 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 23:56:21] 2025-06-03 21:52:59,878 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 23:56:21] 2025-06-03 21:52:59,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:56:21] 2025-06-03 21:52:59,879 | INFO     | will abort loop
[2025-06-03 23:56:21] 2025-06-03 21:53:00,266 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:56:21] 2025-06-03 21:53:00,267 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:56:21] 2025-06-03 21:53:00,267 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:56:21] 2025-06-03 21:53:00,416 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:56:21] 2025-06-03 21:53:00,479 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:56:21] 2025-06-03 21:53:00,697 | INFO     | [data] control thread has finished
[2025-06-03 23:56:21] 2025-06-03 21:53:00,796 | INFO     | all payload control threads have been joined
[2025-06-03 23:56:21] 2025-06-03 21:53:00,883 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:56:21] 2025-06-03 21:53:01,053 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:56:21] 2025-06-03 21:53:01,054 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:56:21] 2025-06-03 21:53:01,072 | INFO     | all job control threads have been joined
[2025-06-03 23:56:21] 2025-06-03 21:53:01,204 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:56:21] 2025-06-03 21:53:01,294 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:56:21] 2025-06-03 21:53:01,417 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:56:21] 2025-06-03 21:53:01,488 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:56:21] 2025-06-03 21:53:01,780 | INFO     | [job] validate thread has finished
[2025-06-03 23:56:21] 2025-06-03 21:53:01,801 | INFO     | [payload] control thread has finished
[2025-06-03 23:56:21] 2025-06-03 21:53:01,803 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:56:21] 2025-06-03 21:53:01,813 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:56:21] 2025-06-03 21:53:02,078 | INFO     | [job] control thread has finished
[2025-06-03 23:56:21] 2025-06-03 21:53:02,808 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:56:21] 2025-06-03 21:53:03,442 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:56:21] 2025-06-03 21:53:04,095 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23410175440704)>', '<ExcThread(monitor, started 23409935218432)>']
[2025-06-03 23:56:21] 2025-06-03 21:53:04,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:56:21] 2025-06-03 21:53:04,286 | INFO     | [monitor] control thread has ended
[2025-06-03 23:56:21] 2025-06-03 21:53:09,120 | INFO     | all workflow threads have been joined
[2025-06-03 23:56:21] 2025-06-03 21:53:09,120 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:56:21] 2025-06-03 21:53:09,121 | INFO     | traces error code: 0
[2025-06-03 23:56:21] 2025-06-03 21:53:09,121 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:56:21] 2025-06-03 21:53:09,324 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:56:21] 2025-06-03 21:53:09,327 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:56:21] 2025-06-03 21:53:09,330 [wrapper] pilotpid: 2421806
[2025-06-03 23:56:21] 2025-06-03 21:53:09,333 [wrapper] Pilot exit status: 0
[2025-06-03 23:56:21] 2025-06-03 21:53:09,344 [wrapper] pandaids: 6669237618
[2025-06-03 23:56:21] 2025-06-03 21:53:09,423 [wrapper] cleanup supervisor_pilot 2867106 2421807
[2025-06-03 23:56:21] 2025-06-03 21:53:09,426 [wrapper] Test setup, not cleaning
[2025-06-03 23:56:21] 2025-06-03 21:53:09,429 [wrapper] apfmon messages muted
[2025-06-03 23:56:21] 2025-06-03 21:53:09,431 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:56:21] 2025-06-03 21:53:09,435 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:56:21]  *** Error codes and diagnostics ***
[2025-06-03 23:56:21]     "exeErrorCode": 0,
[2025-06-03 23:56:21]     "exeErrorDiag": "",
[2025-06-03 23:56:21]     "pilotErrorCode": 0,
[2025-06-03 23:56:21]     "pilotErrorDiag": "",
[2025-06-03 23:56:21]  *** Listing of results directory ***
[2025-06-03 23:56:21] total 424868
[2025-06-03 23:56:21] -rw-r--r-- 1 boinc boinc      5111 May 29 06:11 queuedata.json
[2025-06-03 23:56:21] -rw-r--r-- 1 boinc boinc    495897 May 29 06:11 pilot3.tar.gz
[2025-06-03 23:56:21] -rwx------ 1 boinc boinc     37140 May 29 06:12 runpilot2-wrapper.sh
[2025-06-03 23:56:21] -rw-r--r-- 1 boinc boinc       100 Jun  3 19:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:56:21] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 19:55 run_atlas
[2025-06-03 23:56:21] -rw-r--r-- 1 boinc boinc       105 Jun  3 19:55 job.xml
[2025-06-03 23:56:21] -rw-r--r-- 2 boinc boinc 226534968 Jun  3 19:55 EVNT.44871834._003678.pool.root.1
[2025-06-03 23:56:21] -rw-r--r-- 1 boinc boinc      6636 Jun  3 19:55 init_data.xml
[2025-06-03 23:56:21] -rw-r--r-- 2 boinc boinc     15093 Jun  3 19:55 start_atlas.sh
[2025-06-03 23:56:21] drwxrwx--x 2 boinc boinc      4096 Jun  3 19:55 shared
[2025-06-03 23:56:21] -rw-r--r-- 2 boinc boinc    508872 Jun  3 19:55 input.tar.gz
[2025-06-03 23:56:21] -rw-r--r-- 1 boinc boinc         0 Jun  3 19:55 boinc_lockfile
[2025-06-03 23:56:21] -rw-r--r-- 1 boinc boinc      2559 Jun  3 19:55 pandaJob.out
[2025-06-03 23:56:21] -rw------- 1 boinc boinc    985078 Jun  3 19:55 agis_schedconf.cvmfs.json
[2025-06-03 23:56:21] drwx------ 4 boinc boinc      4096 Jun  3 19:55 pilot3
[2025-06-03 23:56:21] -rw------- 1 boinc boinc 201409574 Jun  3 23:52 HITS.44871837._094685.pool.root.1
[2025-06-03 23:56:21] -rw-r--r-- 1 boinc boinc       528 Jun  3 23:52 boinc_task_state.xml
[2025-06-03 23:56:21] -rw------- 1 boinc boinc        95 Jun  3 23:52 pilot_heartbeat.json
[2025-06-03 23:56:21] -rw------- 1 boinc boinc      1036 Jun  3 23:52 memory_monitor_summary.json
[2025-06-03 23:56:21] -rw------- 1 boinc boinc   1603667 Jun  3 23:52 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:56:21] -rw------- 1 boinc boinc    333351 Jun  3 23:52 log.44871837._094685.job.log.tgz.1
[2025-06-03 23:56:21] -rw------- 1 boinc boinc      7732 Jun  3 23:52 heartbeat.json
[2025-06-03 23:56:21] -rw------- 1 boinc boinc      4549 Jun  3 23:53 pilotlog.txt
[2025-06-03 23:56:21] -rw------- 1 boinc boinc   1309181 Jun  3 23:53 log.44871837._094685.job.log.1
[2025-06-03 23:56:21] -rw------- 1 boinc boinc       357 Jun  3 23:53 output.list
[2025-06-03 23:56:21] -rw-r--r-- 1 boinc boinc       620 Jun  3 23:53 runtime_log
[2025-06-03 23:56:21] -rw------- 1 boinc boinc   1658880 Jun  3 23:53 result.tar.gz
[2025-06-03 23:56:21] -rw------- 1 boinc boinc       666 Jun  3 23:53 uRLLDmonje7n9Rq4apOajLDm4fhM0noT9bVof3QYDmIcUKDmcl8XAn.diag
[2025-06-03 23:56:21] -rw-r--r-- 1 boinc boinc      9026 Jun  3 23:53 runtime_log.err
[2025-06-03 23:56:21] -rw-r--r-- 1 boinc boinc        26 Jun  3 23:56 wrapper_checkpoint.txt
[2025-06-03 23:56:21] -rw-r--r-- 1 boinc boinc      8192 Jun  3 23:56 boinc_mmap_file
[2025-06-03 23:56:21] -rw-r--r-- 1 boinc boinc     20927 Jun  3 23:56 stderr.txt
[2025-06-03 23:56:21] HITS file was successfully produced:
[2025-06-03 23:56:21] -rw------- 1 boinc boinc 201409574 Jun  3 23:52 shared/HITS.pool.root.1
[2025-06-03 23:56:21]  *** Contents of shared directory: ***
[2025-06-03 23:56:21] total 420064
[2025-06-03 23:56:21] -rw-r--r-- 2 boinc boinc 226534968 Jun  3 19:55 ATLAS.root_0
[2025-06-03 23:56:21] -rw-r--r-- 2 boinc boinc     15093 Jun  3 19:55 start_atlas.sh
[2025-06-03 23:56:21] -rw-r--r-- 2 boinc boinc    508872 Jun  3 19:55 input.tar.gz
[2025-06-03 23:56:21] -rw------- 1 boinc boinc 201409574 Jun  3 23:52 HITS.pool.root.1
[2025-06-03 23:56:21] -rw------- 1 boinc boinc   1658880 Jun  3 23:53 result.tar.gz
23:56:23 (2416778): run_atlas exited; CPU time 55106.114310
23:56:23 (2416778): called boinc_finish(0)

</stderr_txt>
]]>

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