Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:41:39 (779953): wrapper (7.7.26015): starting
01:41:39 (779953): wrapper: running run_atlas (--nthreads 4)
[2025-06-01 01:41:39] Arguments: --nthreads 4
[2025-06-01 01:41:39] Threads: 4
[2025-06-01 01:41:39] Checking for CVMFS
[2025-06-01 01:41:39] No cvmfs_config command found, will try listing directly
[2025-06-01 01:41:39] CVMFS is ok
[2025-06-01 01:41:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-01 01:41:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-01 01:41:39] Further information can be found at the LHC@home message board.
[2025-06-01 01:41:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-01 01:41:39] Checking for apptainer binary...
[2025-06-01 01:41:39] which: no apptainer in ((null))
[2025-06-01 01:41:39] apptainer is not installed, using version from CVMFS
[2025-06-01 01:41:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-01 01:41:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-06-01 01:41:39] apptainer works
[2025-06-01 01:41:39] Set ATHENA_PROC_NUMBER=4
[2025-06-01 01:41:39] Set ATHENA_CORE_NUMBER=4
[2025-06-01 01:41:39] Starting ATLAS job with PandaID=6668326039
[2025-06-01 01:41:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-01 03:33:02]  *** The last 200 lines of the pilot log: ***
[2025-06-01 03:33:02] 2025-06-01 01:32:40,433 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2201470/.job.ad'
[2025-06-01 03:33:02] 2025-06-01 01:32:40,433 | INFO     | total number of processed events: 400 (read)
[2025-06-01 03:33:02] 2025-06-01 01:32:40,435 | INFO     | executing command: lscpu
[2025-06-01 03:33:02] 2025-06-01 01:32:40,470 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-01 03:33:02] 2025-06-01 01:32:40,713 | INFO     | monitor loop #504: job 0:6668326039 is in state 'finished'
[2025-06-01 03:33:02] 2025-06-01 01:32:40,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-01 03:33:02] 2025-06-01 01:32:42,727 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-01 03:33:02] 2025-06-01 01:32:42,727 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6668326039/memory_monitor_summary.json (trf name=prmon)
[2025-06-01 03:33:02] 2025-06-01 01:32:42,728 | INFO     | extracted standard info from prmon json
[2025-06-01 03:33:02] 2025-06-01 01:32:42,728 | INFO     | extracted standard memory fields from prmon json
[2025-06-01 03:33:02] 2025-06-01 01:32:42,728 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-01 03:33:02] 2025-06-01 01:32:42,728 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-01 03:33:02] 2025-06-01 01:32:42,728 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-01 03:33:02] 2025-06-01 01:32:42,729 | INFO     | fitting pss+swap vs Time
[2025-06-01 03:33:02] 2025-06-01 01:32:42,730 | INFO     | sum of square deviations: 401533110.0
[2025-06-01 03:33:02] 2025-06-01 01:32:42,730 | INFO     | sum of deviations: 2031432003.9999962
[2025-06-01 03:33:02] 2025-06-01 01:32:42,730 | INFO     | mean x: 1748738219.0
[2025-06-01 03:33:02] 2025-06-01 01:32:42,730 | INFO     | mean y: 2356319.0366972475
[2025-06-01 03:33:02] 2025-06-01 01:32:42,730 | INFO     | -- intersect: -8844841324.75052
[2025-06-01 03:33:02] 2025-06-01 01:32:42,730 | INFO     | intersect: -8844841324.75052
[2025-06-01 03:33:02] 2025-06-01 01:32:42,730 | INFO     | chi2: 1.4573493522778536
[2025-06-01 03:33:02] 2025-06-01 01:32:42,730 | INFO     | sum of square deviations: 348769330.0
[2025-06-01 03:33:02] 2025-06-01 01:32:42,731 | INFO     | sum of deviations: 2052807197.0
[2025-06-01 03:33:02] 2025-06-01 01:32:42,731 | INFO     | mean x: 1748738066.5
[2025-06-01 03:33:02] 2025-06-01 01:32:42,731 | INFO     | mean y: 2356383.730769231
[2025-06-01 03:33:02] 2025-06-01 01:32:42,731 | INFO     | -- intersect: -10290469790.460247
[2025-06-01 03:33:02] 2025-06-01 01:32:42,731 | INFO     | intersect: -10290469790.460247
[2025-06-01 03:33:02] 2025-06-01 01:32:42,731 | INFO     | chi2: 1.459048641538892
[2025-06-01 03:33:02] 2025-06-01 01:32:42,731 | INFO     | current chi2=1.459048641538892 (change=-0.11660136661002676 %)
[2025-06-01 03:33:02] 2025-06-01 01:32:42,731 | INFO     | right removable region: 103
[2025-06-01 03:33:02] 2025-06-01 01:32:42,731 | INFO     | sum of square deviations: 348769330.0
[2025-06-01 03:33:02] 2025-06-01 01:32:42,731 | INFO     | sum of deviations: -10938430787.5
[2025-06-01 03:33:02] 2025-06-01 01:32:42,731 | INFO     | mean x: 1748738371.5
[2025-06-01 03:33:02] 2025-06-01 01:32:42,731 | INFO     | mean y: 2392730.451923077
[2025-06-01 03:33:02] 2025-06-01 01:32:42,731 | INFO     | -- intersect: 54847965424.86921
[2025-06-01 03:33:02] 2025-06-01 01:32:42,732 | INFO     | intersect: 54847965424.86921
[2025-06-01 03:33:02] 2025-06-01 01:32:42,732 | INFO     | chi2: 0.04421384487520854
[2025-06-01 03:33:02] 2025-06-01 01:32:42,732 | INFO     | current chi2=0.04421384487520854 (change=96.96614646267885 %)
[2025-06-01 03:33:02] 2025-06-01 01:32:42,732 | INFO     | sum of square deviations: 300842850.0
[2025-06-01 03:33:02] 2025-06-01 01:32:42,732 | INFO     | sum of deviations: -8928037897.0
[2025-06-01 03:33:02] 2025-06-01 01:32:42,732 | INFO     | mean x: 1748738524.0
[2025-06-01 03:33:02] 2025-06-01 01:32:42,732 | INFO     | mean y: 2386317.595959596
[2025-06-01 03:33:02] 2025-06-01 01:32:42,732 | INFO     | -- intersect: 51899261427.69362
[2025-06-01 03:33:02] 2025-06-01 01:32:42,732 | INFO     | intersect: 51899261427.69362
[2025-06-01 03:33:02] 2025-06-01 01:32:42,732 | INFO     | chi2: 0.04302436731642575
[2025-06-01 03:33:02] 2025-06-01 01:32:42,732 | INFO     | current chi2=0.04302436731642575 (change=2.6902830146078354 %)
[2025-06-01 03:33:02] 2025-06-01 01:32:42,732 | INFO     | left removable region: 20
[2025-06-01 03:33:02] 2025-06-01 01:32:42,732 | INFO     | sum of square deviations: 177275882.0
[2025-06-01 03:33:02] 2025-06-01 01:32:42,732 | INFO     | sum of deviations: -4001347399.0
[2025-06-01 03:33:02] 2025-06-01 01:32:42,733 | INFO     | mean x: 1748738646.0
[2025-06-01 03:33:02] 2025-06-01 01:32:42,733 | INFO     | mean y: 2369813.506024096
[2025-06-01 03:33:02] 2025-06-01 01:32:42,733 | INFO     | -- intersect: 39473677211.67135
[2025-06-01 03:33:02] 2025-06-01 01:32:42,733 | INFO     | intersect: 39473677211.67135
[2025-06-01 03:33:02] 2025-06-01 01:32:42,733 | INFO     | chi2: 0.02657781526534998
[2025-06-01 03:33:02] 2025-06-01 01:32:42,733 | INFO     | -- intersect: 39473677211.67135
[2025-06-01 03:33:02] 2025-06-01 01:32:42,733 | INFO     | current memory leak: -22.57 B/s (using 83 data points, chi2=0.03)
[2025-06-01 03:33:02] 2025-06-01 01:32:42,733 | INFO     | ..............................
[2025-06-01 03:33:02] 2025-06-01 01:32:42,733 | INFO     | . Timing measurements:
[2025-06-01 03:33:02] 2025-06-01 01:32:42,733 | INFO     | . get job = 0 s
[2025-06-01 03:33:02] 2025-06-01 01:32:42,733 | INFO     | . initial setup = 1 s
[2025-06-01 03:33:02] 2025-06-01 01:32:42,733 | INFO     | . payload setup = 3 s
[2025-06-01 03:33:02] 2025-06-01 01:32:42,733 | INFO     | . stage-in = 0 s
[2025-06-01 03:33:02] 2025-06-01 01:32:42,733 | INFO     | . payload execution = 6632 s
[2025-06-01 03:33:02] 2025-06-01 01:32:42,733 | INFO     | . stage-out = 0 s
[2025-06-01 03:33:02] 2025-06-01 01:32:42,733 | INFO     | . log creation = 0 s
[2025-06-01 03:33:02] 2025-06-01 01:32:42,733 | INFO     | ..............................
[2025-06-01 03:33:02] 2025-06-01 01:32:42,776 | INFO     | 
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | job summary report
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | --------------------------------------------------
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | PanDA job id: 6668326039
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | task id: 44871837
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | errors: (none)
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | pilot state: finished 
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | transexitcode: 0
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | exeerrorcode: 0
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | exeerrordiag: 
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | exitcode: 0
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | exitmsg: OK
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | cpuconsumptiontime: 25573 s
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | nevents: 400
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | neventsw: 0
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | pid: 792861
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | pgrp: 792861
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | corecount: 4
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | event service: False
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | sizes: {0: 2405244, 1: 2405244, 3: 2405478, 11: 2405506, 6640: 2432614, 6641: 2441761, 6645: 2441875}
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | --------------------------------------------------
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | 
[2025-06-01 03:33:02] 2025-06-01 01:32:42,777 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-01 03:33:02] 2025-06-01 01:32:42,790 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-01 03:33:02] 2025-06-01 01:32:42,790 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-01 03:33:02] 2025-06-01 01:32:42,790 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-01 03:33:02] 2025-06-01 01:32:42,790 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-01 03:33:02] 2025-06-01 01:32:42,790 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-01 03:33:02] 2025-06-01 01:32:42,790 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-01 03:33:02] 2025-06-01 01:32:42,790 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-01 03:33:02] 2025-06-01 01:32:42,790 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-01 03:33:02] 2025-06-01 01:32:42,790 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-01 03:33:02] 2025-06-01 01:32:42,790 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-01 03:33:02] 2025-06-01 01:32:42,790 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-01 03:33:02] 2025-06-01 01:32:42,790 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-01 03:33:02] 2025-06-01 01:32:42,790 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-01 03:33:02] 2025-06-01 01:32:42,791 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-01 03:33:02] 2025-06-01 01:32:42,791 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-01 03:33:02] 2025-06-01 01:32:42,791 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-01 03:33:02] 2025-06-01 01:32:42,791 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-01 03:33:02] 2025-06-01 01:32:42,791 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-01 03:33:02] 2025-06-01 01:32:42,791 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-01 03:33:02] 2025-06-01 01:32:42,791 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-01 03:33:02] 2025-06-01 01:32:42,791 | INFO     | job 6668326039 has completed (purged errors)
[2025-06-01 03:33:02] 2025-06-01 01:32:42,791 | INFO     | overall cleanup function is called
[2025-06-01 03:33:02] 2025-06-01 01:32:43,797 | INFO     | --- collectZombieJob: --- 10, [792861]
[2025-06-01 03:33:02] 2025-06-01 01:32:43,798 | INFO     | zombie collector waiting for pid 792861
[2025-06-01 03:33:02] 2025-06-01 01:32:43,798 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-01 03:33:02] 2025-06-01 01:32:43,798 | INFO     | collected zombie processes
[2025-06-01 03:33:02] 2025-06-01 01:32:43,798 | INFO     | will attempt to kill all subprocesses of pid=792861
[2025-06-01 03:33:02] 2025-06-01 01:32:43,914 | INFO     | process IDs to be killed: [792861] (in reverse order)
[2025-06-01 03:33:02] 2025-06-01 01:32:43,958 | WARNING  | found no corresponding commands to process id(s)
[2025-06-01 03:33:02] 2025-06-01 01:32:43,958 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-01 03:33:02] 2025-06-01 01:32:43,963 | INFO     | did not find any defunct processes belonging to 792861
[2025-06-01 03:33:02] 2025-06-01 01:32:43,967 | INFO     | did not find any defunct processes belonging to 792861
[2025-06-01 03:33:02] 2025-06-01 01:32:43,967 | INFO     | ready for new job
[2025-06-01 03:33:02] 2025-06-01 01:32:43,967 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-01 03:33:02] 2025-06-01 01:32:43,968 | INFO     | **************************************
[2025-06-01 03:33:02] 2025-06-01 01:32:43,968 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-01 03:33:02] 2025-06-01 01:32:43,968 | INFO     | **************************************
[2025-06-01 03:33:02] 2025-06-01 01:32:43,968 | INFO     | 
[2025-06-01 03:33:02] 2025-06-01 01:32:43,970 | INFO     | architecture information:
[2025-06-01 03:33:02] 2025-06-01 01:32:43,970 | INFO     | executing command: cat /etc/os-release
[2025-06-01 03:33:02] 2025-06-01 01:32:43,978 | INFO     | cat /etc/os-release:
[2025-06-01 03:33:02] NAME="CentOS Linux"
[2025-06-01 03:33:02] VERSION="7 (Core)"
[2025-06-01 03:33:02] ID="centos"
[2025-06-01 03:33:02] ID_LIKE="rhel fedora"
[2025-06-01 03:33:02] VERSION_ID="7"
[2025-06-01 03:33:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-01 03:33:02] ANSI_COLOR="0;31"
[2025-06-01 03:33:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-01 03:33:02] HOME_URL="https://www.centos.org/"
[2025-06-01 03:33:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-01 03:33:02] 
[2025-06-01 03:33:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-01 03:33:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-01 03:33:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-01 03:33:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-01 03:33:02] 
[2025-06-01 03:33:02] 2025-06-01 01:32:43,978 | INFO     | **************************************
[2025-06-01 03:33:02] 2025-06-01 01:32:44,481 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-01 03:33:02] 2025-06-01 01:32:44,491 | INFO     | sufficient remaining disk space (693089861632 B)
[2025-06-01 03:33:02] 2025-06-01 01:32:44,491 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-01 03:33:02] 2025-06-01 01:32:44,491 | INFO     | current server update state: UPDATING_FINAL
[2025-06-01 03:33:02] 2025-06-01 01:32:44,491 | INFO     | update_server=False
[2025-06-01 03:33:02] 2025-06-01 01:32:44,491 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-01 03:33:02] 2025-06-01 01:32:44,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-01 03:33:02] 2025-06-01 01:32:44,492 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-01 03:33:02] 2025-06-01 01:32:44,492 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-01 03:33:02] 2025-06-01 01:32:44,492 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-01 03:33:02] 2025-06-01 01:32:44,492 | INFO     | aborting loop
[2025-06-01 03:33:02] 2025-06-01 01:32:44,492 | INFO     | found 0 job(s) in 20 queues
[2025-06-01 03:33:02] 2025-06-01 01:32:44,493 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-01 03:33:02] 2025-06-01 01:32:44,493 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-01 03:33:02] 2025-06-01 01:32:44,515 | INFO     | all data control threads have been joined
[2025-06-01 03:33:02] 2025-06-01 01:32:44,823 | INFO     | all payload control threads have been joined
[2025-06-01 03:33:02] 2025-06-01 01:32:44,960 | INFO     | all job control threads have been joined
[2025-06-01 03:33:02] 2025-06-01 01:32:45,006 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-01 03:33:02] 2025-06-01 01:32:45,495 | INFO     | [job] retrieve thread has finished
[2025-06-01 03:33:02] 2025-06-01 01:32:45,497 | INFO     | [job] queue monitor thread has finished
[2025-06-01 03:33:02] 2025-06-01 01:32:45,498 | INFO     | [job] job monitor thread has finished
[2025-06-01 03:33:02] 2025-06-01 01:32:45,521 | INFO     | [data] control thread has finished
[2025-06-01 03:33:02] 2025-06-01 01:32:45,758 | INFO     | [data] copytool_in thread has finished
[2025-06-01 03:33:02] 2025-06-01 01:32:45,828 | INFO     | [payload] control thread has finished
[2025-06-01 03:33:02] 2025-06-01 01:32:45,965 | INFO     | [job] control thread has finished
[2025-06-01 03:33:02] 2025-06-01 01:32:46,056 | INFO     | [job] validate thread has finished
[2025-06-01 03:33:02] 2025-06-01 01:32:46,272 | INFO     | [job] create_data_payload thread has finished
[2025-06-01 03:33:02] 2025-06-01 01:32:46,327 | INFO     | [payload] execute_payloads thread has finished
[2025-06-01 03:33:02] 2025-06-01 01:32:46,366 | INFO     | [payload] validate_pre thread has finished
[2025-06-01 03:33:02] 2025-06-01 01:32:46,498 | INFO     | [data] copytool_out thread has finished
[2025-06-01 03:33:02] 2025-06-01 01:32:46,903 | INFO     | [payload] validate_post thread has finished
[2025-06-01 03:33:02] 2025-06-01 01:32:46,967 | INFO     | [payload] failed_post thread has finished
[2025-06-01 03:33:02] 2025-06-01 01:32:49,012 | INFO     | [data] queue_monitor thread has finished
[2025-06-01 03:33:02] 2025-06-01 01:32:55,248 | INFO     | job.realtimelogging is not enabled
[2025-06-01 03:33:02] 2025-06-01 01:32:56,254 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-01 03:33:02] 2025-06-01 01:32:57,048 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23235291780928)>', '<ExcThread(monitor, started 23235051616000)>']
[2025-06-01 03:33:02] 2025-06-01 01:32:57,559 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-01 03:33:02] 2025-06-01 01:32:57,559 | INFO     | [monitor] control thread has ended
[2025-06-01 03:33:02] 2025-06-01 01:33:02,073 | INFO     | all workflow threads have been joined
[2025-06-01 03:33:02] 2025-06-01 01:33:02,073 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-01 03:33:02] 2025-06-01 01:33:02,074 | INFO     | traces error code: 0
[2025-06-01 03:33:02] 2025-06-01 01:33:02,074 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-01 03:33:02] 2025-06-01 01:33:02,140 [wrapper] ==== pilot stdout END ====
[2025-06-01 03:33:02] 2025-06-01 01:33:02,142 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-01 03:33:02] 2025-06-01 01:33:02,144 [wrapper] pilotpid: 783696
[2025-06-01 03:33:02] 2025-06-01 01:33:02,146 [wrapper] Pilot exit status: 0
[2025-06-01 03:33:02] 2025-06-01 01:33:02,153 [wrapper] pandaids: 6668326039
[2025-06-01 03:33:02] 2025-06-01 01:33:02,185 [wrapper] cleanup supervisor_pilot  891954 783697
[2025-06-01 03:33:02] 2025-06-01 01:33:02,187 [wrapper] Test setup, not cleaning
[2025-06-01 03:33:02] 2025-06-01 01:33:02,189 [wrapper] apfmon messages muted
[2025-06-01 03:33:02] 2025-06-01 01:33:02,191 [wrapper] ==== wrapper stdout END ====
[2025-06-01 03:33:02] 2025-06-01 01:33:02,193 [wrapper] ==== wrapper stderr END ====
[2025-06-01 03:33:02]  *** Error codes and diagnostics ***
[2025-06-01 03:33:02]     "exeErrorCode": 0,
[2025-06-01 03:33:02]     "exeErrorDiag": "",
[2025-06-01 03:33:02]     "pilotErrorCode": 0,
[2025-06-01 03:33:02]     "pilotErrorDiag": "",
[2025-06-01 03:33:02]  *** Listing of results directory ***
[2025-06-01 03:33:02] total 416152
[2025-06-01 03:33:02] -rw-r--r-- 1 boinc boinc    495897 May 28 11:38 pilot3.tar.gz
[2025-06-01 03:33:02] -rw-r--r-- 1 boinc boinc      5111 May 28 11:51 queuedata.json
[2025-06-01 03:33:02] -rwx------ 1 boinc boinc     37140 May 28 11:53 runpilot2-wrapper.sh
[2025-06-01 03:33:02] -rw-r--r-- 1 boinc boinc       100 Jun  1 01:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-01 03:33:02] -rwxr-xr-x 1 boinc boinc      7986 Jun  1 01:41 run_atlas
[2025-06-01 03:33:02] -rw-r--r-- 1 boinc boinc       105 Jun  1 01:41 job.xml
[2025-06-01 03:33:02] -rw-r--r-- 1 boinc boinc      6637 Jun  1 01:41 init_data.xml
[2025-06-01 03:33:02] -rw-r--r-- 2 boinc boinc 222321904 Jun  1 01:41 EVNT.44871834._003220.pool.root.1
[2025-06-01 03:33:02] -rw-r--r-- 2 boinc boinc     15093 Jun  1 01:41 start_atlas.sh
[2025-06-01 03:33:02] drwxrwx--x 2 boinc boinc      4096 Jun  1 01:41 shared
[2025-06-01 03:33:02] -rw-r--r-- 2 boinc boinc    508875 Jun  1 01:41 input.tar.gz
[2025-06-01 03:33:02] -rw-r--r-- 1 boinc boinc         0 Jun  1 01:41 boinc_lockfile
[2025-06-01 03:33:02] -rw-r--r-- 1 boinc boinc      2558 Jun  1 01:41 pandaJob.out
[2025-06-01 03:33:02] -rw------- 1 boinc boinc    987412 Jun  1 01:41 agis_schedconf.cvmfs.json
[2025-06-01 03:33:02] -rw------- 1 boinc boinc   1603667 Jun  1 01:41 agis_ddmendpoints.agis.ALL.json
[2025-06-01 03:33:02] drwx------ 4 boinc boinc      4096 Jun  1 01:41 pilot3
[2025-06-01 03:33:02] -rw------- 1 boinc boinc        95 Jun  1 03:31 pilot_heartbeat.json
[2025-06-01 03:33:02] -rw------- 1 boinc boinc 198174744 Jun  1 03:32 HITS.44871837._082505.pool.root.1
[2025-06-01 03:33:02] -rw------- 1 boinc boinc      1034 Jun  1 03:32 memory_monitor_summary.json
[2025-06-01 03:33:02] -rw-r--r-- 1 boinc boinc      8192 Jun  1 03:32 boinc_mmap_file
[2025-06-01 03:33:02] -rw-r--r-- 1 boinc boinc        27 Jun  1 03:32 wrapper_checkpoint.txt
[2025-06-01 03:33:02] -rw-r--r-- 1 boinc boinc       529 Jun  1 03:32 boinc_task_state.xml
[2025-06-01 03:33:02] -rw------- 1 boinc boinc    252559 Jun  1 03:32 log.44871837._082505.job.log.tgz.1
[2025-06-01 03:33:02] -rw------- 1 boinc boinc      7711 Jun  1 03:32 heartbeat.json
[2025-06-01 03:33:02] -rw------- 1 boinc boinc      4558 Jun  1 03:33 pilotlog.txt
[2025-06-01 03:33:02] -rw------- 1 boinc boinc    654844 Jun  1 03:33 log.44871837._082505.job.log.1
[2025-06-01 03:33:02] -rw------- 1 boinc boinc       357 Jun  1 03:33 output.list
[2025-06-01 03:33:02] -rw-r--r-- 1 boinc boinc       620 Jun  1 03:33 runtime_log
[2025-06-01 03:33:02] -rw------- 1 boinc boinc    921600 Jun  1 03:33 result.tar.gz
[2025-06-01 03:33:02] -rw-r--r-- 1 boinc boinc      9025 Jun  1 03:33 runtime_log.err
[2025-06-01 03:33:02] -rw------- 1 boinc boinc       660 Jun  1 03:33 k4sMDmMeSe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfrbKDmGCReWo.diag
[2025-06-01 03:33:02] -rw-r--r-- 1 boinc boinc     20899 Jun  1 03:33 stderr.txt
[2025-06-01 03:33:02] HITS file was successfully produced:
[2025-06-01 03:33:02] -rw------- 1 boinc boinc 198174744 Jun  1 03:32 shared/HITS.pool.root.1
[2025-06-01 03:33:02]  *** Contents of shared directory: ***
[2025-06-01 03:33:02] total 412064
[2025-06-01 03:33:02] -rw-r--r-- 2 boinc boinc 222321904 Jun  1 01:41 ATLAS.root_0
[2025-06-01 03:33:02] -rw-r--r-- 2 boinc boinc     15093 Jun  1 01:41 start_atlas.sh
[2025-06-01 03:33:02] -rw-r--r-- 2 boinc boinc    508875 Jun  1 01:41 input.tar.gz
[2025-06-01 03:33:02] -rw------- 1 boinc boinc 198174744 Jun  1 03:32 HITS.pool.root.1
[2025-06-01 03:33:02] -rw------- 1 boinc boinc    921600 Jun  1 03:33 result.tar.gz
03:33:03 (779953): run_atlas exited; CPU time 25661.155017
03:33:03 (779953): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN