Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:03:09 (32196): wrapper (7.7.26015): starting
09:03:09 (32196): wrapper: running run_atlas (--nthreads 8)
[2025-05-30 09:03:09] Arguments: --nthreads 8
[2025-05-30 09:03:09] Threads: 8
[2025-05-30 09:03:09] Checking for CVMFS
[2025-05-30 09:03:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 09:03:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 09:03:11] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 09:03:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 09:03:13] 2.11.2.0 18542 25671 90096 146590 1 114 23831765 25165824 4353 130560 0 13419605 99.809 14590113 1991 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-30 09:03:13] CVMFS is ok
[2025-05-30 09:03:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 09:03:13] Checking for apptainer binary...
[2025-05-30 09:03:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-30 09:03:13] Running /usr/bin/apptainer --version
[2025-05-30 09:03:13] apptainer version 1.3.2-1.el7
[2025-05-30 09:03:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 09:03:24] cg-vwn438.simple-grid.lan
[2025-05-30 09:03:24] apptainer works
[2025-05-30 09:03:24] Set ATHENA_PROC_NUMBER=8
[2025-05-30 09:03:24] Set ATHENA_CORE_NUMBER=8
[2025-05-30 09:03:24] Starting ATLAS job with PandaID=6669135950
[2025-05-30 09:03:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 16:20:27]  *** The last 200 lines of the pilot log: ***
[2025-05-30 16:20:27] 2025-05-30 12:11:50,590 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 16:20:27] 2025-05-30 12:11:50,590 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 16:20:27] 2025-05-30 12:11:50,590 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 16:20:27] 2025-05-30 12:11:50,597 | INFO     | fitting pss+swap vs Time
[2025-05-30 16:20:27] 2025-05-30 12:11:50,598 | INFO     | sum of square deviations: 8456158550.0
[2025-05-30 16:20:27] 2025-05-30 12:11:50,614 | INFO     | sum of deviations: 27434589630.999996
[2025-05-30 16:20:27] 2025-05-30 12:11:50,615 | INFO     | mean x: 1748597834.0
[2025-05-30 16:20:27] 2025-05-30 12:11:50,615 | INFO     | mean y: 2486479.5448504984
[2025-05-30 16:20:27] 2025-05-30 12:11:50,615 | INFO     | -- intersect: -5670546224.583605
[2025-05-30 16:20:27] 2025-05-30 12:11:50,615 | INFO     | intersect: -5670546224.583605
[2025-05-30 16:20:27] 2025-05-30 12:11:50,616 | INFO     | chi2: 2.2748493450252947
[2025-05-30 16:20:27] 2025-05-30 12:11:50,616 | INFO     | sum of square deviations: 8041713570.0
[2025-05-30 16:20:27] 2025-05-30 12:11:50,619 | INFO     | sum of deviations: 46768038882.00002
[2025-05-30 16:20:27] 2025-05-30 12:11:50,619 | INFO     | mean x: 1748597681.5
[2025-05-30 16:20:27] 2025-05-30 12:11:50,620 | INFO     | mean y: 2493494.6013513515
[2025-05-30 16:20:27] 2025-05-30 12:11:50,620 | INFO     | -- intersect: -10166792397.704697
[2025-05-30 16:20:27] 2025-05-30 12:11:50,620 | INFO     | intersect: -10166792397.704697
[2025-05-30 16:20:27] 2025-05-30 12:11:50,620 | INFO     | chi2: 1.503932186879927
[2025-05-30 16:20:27] 2025-05-30 12:11:50,620 | INFO     | current chi2=1.503932186879927 (change=33.888712667114916 %)
[2025-05-30 16:20:27] 2025-05-30 12:11:50,621 | INFO     | sum of square deviations: 7641036290.0
[2025-05-30 16:20:27] 2025-05-30 12:11:50,624 | INFO     | sum of deviations: 45812162599.0
[2025-05-30 16:20:27] 2025-05-30 12:11:50,624 | INFO     | mean x: 1748597529.0
[2025-05-30 16:20:27] 2025-05-30 12:11:50,624 | INFO     | mean y: 2493130.756013746
[2025-05-30 16:20:27] 2025-05-30 12:11:50,625 | INFO     | -- intersect: -10481298763.230347
[2025-05-30 16:20:27] 2025-05-30 12:11:50,625 | INFO     | intersect: -10481298763.230347
[2025-05-30 16:20:27] 2025-05-30 12:11:50,625 | INFO     | chi2: 1.5043824336599334
[2025-05-30 16:20:27] 2025-05-30 12:11:50,625 | INFO     | current chi2=1.5043824336599334 (change=-0.029937970869589398 %)
[2025-05-30 16:20:27] 2025-05-30 12:11:50,626 | INFO     | right removable region: 290
[2025-05-30 16:20:27] 2025-05-30 12:11:50,626 | INFO     | sum of square deviations: 8041713570.0
[2025-05-30 16:20:27] 2025-05-30 12:11:50,629 | INFO     | sum of deviations: -18436364951.000004
[2025-05-30 16:20:27] 2025-05-30 12:11:50,629 | INFO     | mean x: 1748597986.5
[2025-05-30 16:20:27] 2025-05-30 12:11:50,629 | INFO     | mean y: 2503232.2635135134
[2025-05-30 16:20:27] 2025-05-30 12:11:50,630 | INFO     | -- intersect: 4011324281.5436583
[2025-05-30 16:20:27] 2025-05-30 12:11:50,630 | INFO     | intersect: 4011324281.5436583
[2025-05-30 16:20:27] 2025-05-30 12:11:50,630 | INFO     | chi2: 0.857794207064647
[2025-05-30 16:20:27] 2025-05-30 12:11:50,630 | INFO     | current chi2=0.857794207064647 (change=62.2922630485181 %)
[2025-05-30 16:20:27] 2025-05-30 12:11:50,631 | INFO     | sum of square deviations: 7641036290.0
[2025-05-30 16:20:27] 2025-05-30 12:11:50,634 | INFO     | sum of deviations: -17246908078.0
[2025-05-30 16:20:27] 2025-05-30 12:11:50,634 | INFO     | mean x: 1748598139.0
[2025-05-30 16:20:27] 2025-05-30 12:11:50,634 | INFO     | mean y: 2502759.5807560137
[2025-05-30 16:20:27] 2025-05-30 12:11:50,634 | INFO     | -- intersect: 3949338008.637644
[2025-05-30 16:20:27] 2025-05-30 12:11:50,634 | INFO     | intersect: 3949338008.637644
[2025-05-30 16:20:27] 2025-05-30 12:11:50,635 | INFO     | chi2: 0.8425792435218818
[2025-05-30 16:20:27] 2025-05-30 12:11:50,635 | INFO     | current chi2=0.8425792435218818 (change=1.7737312070258044 %)
[2025-05-30 16:20:27] 2025-05-30 12:11:50,635 | INFO     | left removable region: 20
[2025-05-30 16:20:27] 2025-05-30 12:11:50,636 | INFO     | sum of square deviations: 6103286527.5
[2025-05-30 16:20:27] 2025-05-30 12:11:50,651 | INFO     | sum of deviations: 12096040384.0
[2025-05-30 16:20:27] 2025-05-30 12:11:50,651 | INFO     | mean x: 1748598108.5
[2025-05-30 16:20:27] 2025-05-30 12:11:50,651 | INFO     | mean y: 2505894.525925926
[2025-05-30 16:20:27] 2025-05-30 12:11:50,651 | INFO     | -- intersect: -3463022594.1825724
[2025-05-30 16:20:27] 2025-05-30 12:11:50,651 | INFO     | intersect: -3463022594.1825724
[2025-05-30 16:20:27] 2025-05-30 12:11:50,652 | INFO     | chi2: 0.0015836784416910692
[2025-05-30 16:20:27] 2025-05-30 12:11:50,652 | INFO     | -- intersect: -3463022594.1825724
[2025-05-30 16:20:27] 2025-05-30 12:11:50,652 | INFO     | current memory leak: 1.98 B/s (using 270 data points, chi2=0.00)
[2025-05-30 16:20:27] 2025-05-30 12:11:50,653 | INFO     | ..............................
[2025-05-30 16:20:27] 2025-05-30 12:11:50,653 | INFO     | . Timing measurements:
[2025-05-30 16:20:27] 2025-05-30 12:11:50,653 | INFO     | . get job = 0 s
[2025-05-30 16:20:27] 2025-05-30 12:11:50,653 | INFO     | . initial setup = 3 s
[2025-05-30 16:20:27] 2025-05-30 12:11:50,654 | INFO     | . payload setup = 15 s
[2025-05-30 16:20:27] 2025-05-30 12:11:50,654 | INFO     | . stage-in = 0 s
[2025-05-30 16:20:27] 2025-05-30 12:11:50,654 | INFO     | . payload execution = 18337 s
[2025-05-30 16:20:27] 2025-05-30 12:11:50,654 | INFO     | . stage-out = 3 s
[2025-05-30 16:20:27] 2025-05-30 12:11:50,654 | INFO     | . log creation = 0 s
[2025-05-30 16:20:27] 2025-05-30 12:11:50,654 | INFO     | ..............................
[2025-05-30 16:20:27] 2025-05-30 12:11:50,873 | INFO     | 
[2025-05-30 16:20:27] 2025-05-30 12:11:50,873 | INFO     | job summary report
[2025-05-30 16:20:27] 2025-05-30 12:11:50,873 | INFO     | --------------------------------------------------
[2025-05-30 16:20:27] 2025-05-30 12:11:50,874 | INFO     | PanDA job id: 6669135950
[2025-05-30 16:20:27] 2025-05-30 12:11:50,874 | INFO     | task id: 44871837
[2025-05-30 16:20:27] 2025-05-30 12:11:50,874 | INFO     | errors: (none)
[2025-05-30 16:20:27] 2025-05-30 12:11:50,874 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 16:20:27] 2025-05-30 12:11:50,874 | INFO     | pilot state: finished 
[2025-05-30 16:20:27] 2025-05-30 12:11:50,874 | INFO     | transexitcode: 0
[2025-05-30 16:20:27] 2025-05-30 12:11:50,874 | INFO     | exeerrorcode: 0
[2025-05-30 16:20:27] 2025-05-30 12:11:50,874 | INFO     | exeerrordiag: 
[2025-05-30 16:20:27] 2025-05-30 12:11:50,874 | INFO     | exitcode: 0
[2025-05-30 16:20:27] 2025-05-30 12:11:50,874 | INFO     | exitmsg: OK
[2025-05-30 16:20:27] 2025-05-30 12:11:50,874 | INFO     | cpuconsumptiontime: 70261 s
[2025-05-30 16:20:27] 2025-05-30 12:11:50,874 | INFO     | nevents: 400
[2025-05-30 16:20:27] 2025-05-30 12:11:50,875 | INFO     | neventsw: 0
[2025-05-30 16:20:27] 2025-05-30 12:11:50,875 | INFO     | pid: 12373
[2025-05-30 16:20:27] 2025-05-30 12:11:50,875 | INFO     | pgrp: 12373
[2025-05-30 16:20:27] 2025-05-30 12:11:50,875 | INFO     | corecount: 8
[2025-05-30 16:20:27] 2025-05-30 12:11:50,875 | INFO     | event service: False
[2025-05-30 16:20:27] 2025-05-30 12:11:50,875 | INFO     | sizes: {0: 2405063, 1: 2405262, 8: 2405468, 12: 2405496, 18356: 2437092, 18357: 2437091, 18361: 2446216, 18363: 2446272, 18463: 2446442}
[2025-05-30 16:20:27] 2025-05-30 12:11:50,875 | INFO     | --------------------------------------------------
[2025-05-30 16:20:27] 2025-05-30 12:11:50,875 | INFO     | 
[2025-05-30 16:20:27] 2025-05-30 12:11:50,875 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-05-30 16:20:27] 2025-05-30 12:11:51,464 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 16:20:27] 2025-05-30 12:11:51,464 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 16:20:27] 2025-05-30 12:11:51,464 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 16:20:27] 2025-05-30 12:11:51,464 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 16:20:27] 2025-05-30 12:11:51,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 16:20:27] 2025-05-30 12:11:51,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 16:20:27] 2025-05-30 12:11:51,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 16:20:27] 2025-05-30 12:11:51,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 16:20:27] 2025-05-30 12:11:51,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 16:20:27] 2025-05-30 12:11:51,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 16:20:27] 2025-05-30 12:11:51,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 16:20:27] 2025-05-30 12:11:51,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 16:20:27] 2025-05-30 12:11:51,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 16:20:27] 2025-05-30 12:11:51,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 16:20:27] 2025-05-30 12:11:51,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 16:20:27] 2025-05-30 12:11:51,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 16:20:27] 2025-05-30 12:11:51,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 16:20:27] 2025-05-30 12:11:51,465 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 16:20:27] 2025-05-30 12:11:51,466 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 16:20:27] 2025-05-30 12:11:51,466 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 16:20:27] 2025-05-30 12:11:51,466 | INFO     | job 6669135950 has completed (purged errors)
[2025-05-30 16:20:27] 2025-05-30 12:11:51,466 | INFO     | overall cleanup function is called
[2025-05-30 16:20:27] 2025-05-30 12:11:52,475 | INFO     | --- collectZombieJob: --- 10, [12373]
[2025-05-30 16:20:27] 2025-05-30 12:11:52,475 | INFO     | zombie collector waiting for pid 12373
[2025-05-30 16:20:27] 2025-05-30 12:11:52,475 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 16:20:27] 2025-05-30 12:11:52,476 | INFO     | collected zombie processes
[2025-05-30 16:20:27] 2025-05-30 12:11:52,476 | INFO     | will attempt to kill all subprocesses of pid=12373
[2025-05-30 16:20:27] 2025-05-30 12:11:52,635 | INFO     | process IDs to be killed: [12373] (in reverse order)
[2025-05-30 16:20:27] 2025-05-30 12:11:53,390 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 16:20:27] 2025-05-30 12:11:53,391 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 16:20:27] 2025-05-30 12:11:53,394 | INFO     | did not find any defunct processes belonging to 12373
[2025-05-30 16:20:27] 2025-05-30 12:11:53,397 | INFO     | did not find any defunct processes belonging to 12373
[2025-05-30 16:20:27] 2025-05-30 12:11:53,398 | INFO     | ready for new job
[2025-05-30 16:20:27] 2025-05-30 12:11:53,398 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 16:20:27] 2025-05-30 12:11:53,400 | INFO     | **************************************
[2025-05-30 16:20:27] 2025-05-30 12:11:53,400 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 16:20:27] 2025-05-30 12:11:53,400 | INFO     | **************************************
[2025-05-30 16:20:27] 2025-05-30 12:11:53,400 | INFO     | 
[2025-05-30 16:20:27] 2025-05-30 12:11:53,402 | INFO     | pilot is running in a VM
[2025-05-30 16:20:27] 2025-05-30 12:11:53,403 | INFO     | architecture information:
[2025-05-30 16:20:27] 2025-05-30 12:11:53,414 | INFO     | executing command: cat /etc/os-release
[2025-05-30 16:20:27] 2025-05-30 12:11:53,621 | INFO     | cat /etc/os-release:
[2025-05-30 16:20:27] NAME="CentOS Linux"
[2025-05-30 16:20:27] VERSION="7 (Core)"
[2025-05-30 16:20:27] ID="centos"
[2025-05-30 16:20:27] ID_LIKE="rhel fedora"
[2025-05-30 16:20:27] VERSION_ID="7"
[2025-05-30 16:20:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 16:20:27] ANSI_COLOR="0;31"
[2025-05-30 16:20:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 16:20:27] HOME_URL="https://www.centos.org/"
[2025-05-30 16:20:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 16:20:27] 
[2025-05-30 16:20:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 16:20:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 16:20:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 16:20:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 16:20:27] 
[2025-05-30 16:20:27] 2025-05-30 12:11:53,621 | INFO     | **************************************
[2025-05-30 16:20:27] 2025-05-30 12:11:54,124 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-05-30 16:20:27] 2025-05-30 12:11:54,192 | INFO     | sufficient remaining disk space (496530096128 B)
[2025-05-30 16:20:27] 2025-05-30 12:11:54,192 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 16:20:27] 2025-05-30 12:11:54,192 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 16:20:27] 2025-05-30 12:11:54,192 | INFO     | update_server=False
[2025-05-30 16:20:27] 2025-05-30 12:11:54,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 16:20:27] 2025-05-30 12:11:54,193 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-30 16:20:27] 2025-05-30 12:11:54,194 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 16:20:27] 2025-05-30 12:11:54,194 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 16:20:27] 2025-05-30 12:11:54,194 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 16:20:27] 2025-05-30 12:11:54,391 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-30 16:20:27] 2025-05-30 12:11:54,391 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-30 16:20:27] 2025-05-30 12:11:54,392 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 16:20:27] 2025-05-30 12:11:54,392 | INFO     | will abort loop
[2025-05-30 16:20:27] 2025-05-30 12:11:54,481 | INFO     | all payload control threads have been joined
[2025-05-30 16:20:27] 2025-05-30 12:11:54,771 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 16:20:27] 2025-05-30 12:11:54,914 | INFO     | all job control threads have been joined
[2025-05-30 16:20:27] 2025-05-30 12:11:55,198 | INFO     | [job] retrieve thread has finished
[2025-05-30 16:20:27] 2025-05-30 12:11:55,248 | INFO     | all data control threads have been joined
[2025-05-30 16:20:27] 2025-05-30 12:11:55,293 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 16:20:27] 2025-05-30 12:11:55,397 | INFO     | [job] job monitor thread has finished
[2025-05-30 16:20:27] 2025-05-30 12:11:55,487 | INFO     | [payload] control thread has finished
[2025-05-30 16:20:27] 2025-05-30 12:11:55,586 | INFO     | [job] validate thread has finished
[2025-05-30 16:20:27] 2025-05-30 12:11:55,609 | INFO     | [payload] failed_post thread has finished
[2025-05-30 16:20:27] 2025-05-30 12:11:55,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 16:20:27] 2025-05-30 12:11:55,920 | INFO     | [job] control thread has finished
[2025-05-30 16:20:27] 2025-05-30 12:11:56,038 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 16:20:27] 2025-05-30 12:11:56,080 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 16:20:27] 2025-05-30 12:11:56,254 | INFO     | [data] control thread has finished
[2025-05-30 16:20:27] 2025-05-30 12:11:56,304 | INFO     | [data] copytool_in thread has finished
[2025-05-30 16:20:27] 2025-05-30 12:11:56,399 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 16:20:27] 2025-05-30 12:11:56,432 | INFO     | [payload] validate_post thread has finished
[2025-05-30 16:20:27] 2025-05-30 12:11:56,675 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 16:20:27] 2025-05-30 12:11:56,777 | INFO     | [data] copytool_out thread has finished
[2025-05-30 16:20:27] 2025-05-30 12:11:56,895 | INFO     | [job] queue monitor thread has finished
[2025-05-30 16:20:27] 2025-05-30 12:12:00,090 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 16:20:27] 2025-05-30 12:12:01,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140031514310464)>', '<ExcThread(monitor, started 140031075272448)>']
[2025-05-30 16:20:27] 2025-05-30 12:12:01,235 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 16:20:27] 2025-05-30 12:12:01,235 | INFO     | [monitor] control thread has ended
[2025-05-30 16:20:27] 2025-05-30 12:12:06,026 | INFO     | all workflow threads have been joined
[2025-05-30 16:20:27] 2025-05-30 12:12:06,026 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 16:20:27] 2025-05-30 12:12:06,027 | INFO     | traces error code: 0
[2025-05-30 16:20:27] 2025-05-30 12:12:06,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 16:20:27] 2025-05-30 12:12:06,358 [wrapper] ==== pilot stdout END ====
[2025-05-30 16:20:27] 2025-05-30 12:12:06,452 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 16:20:27] 2025-05-30 12:12:06,545 [wrapper] pilotpid: 3830
[2025-05-30 16:20:27] 2025-05-30 12:12:06,641 [wrapper] Pilot exit status: 0
[2025-05-30 16:20:27] 2025-05-30 12:12:07,022 [wrapper] pandaids: 6669135950
[2025-05-30 16:20:27] 2025-05-30 12:12:07,759 [wrapper] cleanup supervisor_pilot 11276 3831
[2025-05-30 16:20:27] 2025-05-30 12:12:07,876 [wrapper] Test setup, not cleaning
[2025-05-30 16:20:27] 2025-05-30 12:12:07,974 [wrapper] apfmon messages muted
[2025-05-30 16:20:27] 2025-05-30 12:12:08,044 [wrapper] ==== wrapper stdout END ====
[2025-05-30 16:20:27] 2025-05-30 12:12:08,083 [wrapper] ==== wrapper stderr END ====
[2025-05-30 16:20:27]  *** Error codes and diagnostics ***
[2025-05-30 16:20:27]     "exeErrorCode": 0,
[2025-05-30 16:20:27]     "exeErrorDiag": "",
[2025-05-30 16:20:27]     "pilotErrorCode": 0,
[2025-05-30 16:20:27]     "pilotErrorDiag": "",
[2025-05-30 16:20:27]  *** Listing of results directory ***
[2025-05-30 16:20:27] total 418532
[2025-05-30 16:20:27] -rw-r--r--. 1 boinc boinc    495897 May 29 05:09 pilot3.tar.gz
[2025-05-30 16:20:27] -rw-r--r--. 1 boinc boinc      5111 May 29 05:15 queuedata.json
[2025-05-30 16:20:27] -rwx------. 1 boinc boinc     37140 May 29 05:16 runpilot2-wrapper.sh
[2025-05-30 16:20:27] -rw-r--r--. 1 boinc boinc       100 May 30 09:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 16:20:27] -rwxr-xr-x. 1 boinc boinc      7986 May 30 09:03 run_atlas
[2025-05-30 16:20:27] -rw-r--r--. 1 boinc boinc       105 May 30 09:03 job.xml
[2025-05-30 16:20:27] -rw-r--r--. 2 boinc boinc 223362977 May 30 09:03 EVNT.44871834._003663.pool.root.1
[2025-05-30 16:20:27] -rw-r--r--. 2 boinc boinc    508881 May 30 09:03 input.tar.gz
[2025-05-30 16:20:27] -rw-r--r--. 1 boinc boinc      6372 May 30 09:03 init_data.xml
[2025-05-30 16:20:27] -rw-r--r--. 2 boinc boinc     15093 May 30 09:03 start_atlas.sh
[2025-05-30 16:20:27] drwxrwx--x. 2 boinc boinc        68 May 30 09:03 shared
[2025-05-30 16:20:27] -rw-r--r--. 1 boinc boinc         0 May 30 09:03 boinc_lockfile
[2025-05-30 16:20:27] -rw-r--r--. 1 boinc boinc      2559 May 30 09:03 pandaJob.out
[2025-05-30 16:20:27] -rw-------. 1 boinc boinc    992366 May 30 09:03 agis_schedconf.cvmfs.json
[2025-05-30 16:20:27] drwx------. 4 boinc boinc      4096 May 30 09:03 pilot3
[2025-05-30 16:20:27] -rw-------. 1 boinc boinc 197373815 May 30 14:08 HITS.44871837._094230.pool.root.1
[2025-05-30 16:20:27] -rw-r--r--. 1 boinc boinc       531 May 30 14:09 boinc_task_state.xml
[2025-05-30 16:20:27] -rw-------. 1 boinc boinc      1018 May 30 14:10 memory_monitor_summary.json
[2025-05-30 16:20:27] -rw-------. 1 boinc boinc   1603667 May 30 14:10 agis_ddmendpoints.agis.ALL.json
[2025-05-30 16:20:27] -rw-------. 1 boinc boinc    429880 May 30 14:10 log.44871837._094230.job.log.tgz.1
[2025-05-30 16:20:27] -rw-------. 1 boinc boinc        95 May 30 14:11 pilot_heartbeat.json
[2025-05-30 16:20:27] -rw-------. 1 boinc boinc      7689 May 30 14:11 heartbeat.json
[2025-05-30 16:20:27] -rw-------. 1 boinc boinc      4725 May 30 14:12 pilotlog.txt
[2025-05-30 16:20:27] -rw-------. 1 boinc boinc   1578004 May 30 14:12 log.44871837._094230.job.log.1
[2025-05-30 16:20:27] -rw-------. 1 boinc boinc       357 May 30 14:12 output.list
[2025-05-30 16:20:27] -rw-r--r--. 1 boinc boinc       620 May 30 14:12 runtime_log
[2025-05-30 16:20:27] -rw-------. 1 boinc boinc   2027520 May 30 14:12 result.tar.gz
[2025-05-30 16:20:27] -rw-r--r--. 1 boinc boinc      8659 May 30 14:12 runtime_log.err
[2025-05-30 16:20:27] -rw-------. 1 boinc boinc       657 May 30 14:12 gVJKDmuvie7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIgdKDmypOkXo.diag
[2025-05-30 16:20:27] -rw-r--r--. 1 boinc boinc      8192 May 30 16:20 boinc_mmap_file
[2025-05-30 16:20:27] -rw-r--r--. 1 boinc boinc        28 May 30 16:20 wrapper_checkpoint.txt
[2025-05-30 16:20:27] -rw-r--r--. 1 boinc boinc     20514 May 30 16:20 stderr.txt
[2025-05-30 16:20:27] HITS file was successfully produced:
[2025-05-30 16:20:27] -rw-------. 1 boinc boinc 197373815 May 30 14:08 shared/HITS.pool.root.1
[2025-05-30 16:20:27]  *** Contents of shared directory: ***
[2025-05-30 16:20:27] total 413372
[2025-05-30 16:20:27] -rw-r--r--. 2 boinc boinc 223362977 May 30 09:03 ATLAS.root_0
[2025-05-30 16:20:27] -rw-r--r--. 2 boinc boinc    508881 May 30 09:03 input.tar.gz
[2025-05-30 16:20:27] -rw-r--r--. 2 boinc boinc     15093 May 30 09:03 start_atlas.sh
[2025-05-30 16:20:27] -rw-------. 1 boinc boinc 197373815 May 30 14:08 HITS.pool.root.1
[2025-05-30 16:20:27] -rw-------. 1 boinc boinc   2027520 May 30 14:12 result.tar.gz
16:20:29 (32196): run_atlas exited; CPU time 70505.026404
16:20:29 (32196): called boinc_finish(0)

</stderr_txt>
]]>

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