Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:29:03 (2887169): wrapper (7.7.26015): starting
07:29:03 (2887169): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 07:29:03] Arguments: --nthreads 4
[2025-06-06 07:29:03] Threads: 4
[2025-06-06 07:29:03] Checking for CVMFS
[2025-06-06 07:29:03] No cvmfs_config command found, will try listing directly
[2025-06-06 07:29:03] CVMFS is ok
[2025-06-06 07:29:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 07:29:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 07:29:03] Further information can be found at the LHC@home message board.
[2025-06-06 07:29:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 07:29:03] Checking for apptainer binary...
[2025-06-06 07:29:03] which: no apptainer in ((null))
[2025-06-06 07:29:03] apptainer is not installed, using version from CVMFS
[2025-06-06 07:29:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 07:29:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot72/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-06-06 07:29:03] apptainer works
[2025-06-06 07:29:03] Set ATHENA_PROC_NUMBER=4
[2025-06-06 07:29:03] Set ATHENA_CORE_NUMBER=4
[2025-06-06 07:29:03] Starting ATLAS job with PandaID=6669135440
[2025-06-06 07:29:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot72/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 09:37:32]  *** The last 200 lines of the pilot log: ***
[2025-06-06 09:37:32] 2025-06-06 07:36:23,028 | INFO     | executing command: lscpu
[2025-06-06 09:37:32] 2025-06-06 07:36:23,130 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 09:37:32] 2025-06-06 07:36:25,345 | INFO     | monitor loop #549: job 0:6669135440 is in state 'finished'
[2025-06-06 09:37:32] 2025-06-06 07:36:25,345 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 09:37:32] 2025-06-06 07:36:27,848 | INFO     | monitor loop #550: job 0:6669135440 is in state 'finished'
[2025-06-06 09:37:32] 2025-06-06 07:36:27,848 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 09:37:32] 2025-06-06 07:36:27,976 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 09:37:32] 2025-06-06 07:36:27,977 | INFO     | using path: /scratch/boinc/var/slot72/slots/0/PanDA_Pilot-6669135440/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 09:37:32] 2025-06-06 07:36:27,977 | INFO     | extracted standard info from prmon json
[2025-06-06 09:37:32] 2025-06-06 07:36:27,978 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 09:37:32] 2025-06-06 07:36:27,978 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 09:37:32] 2025-06-06 07:36:27,978 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 09:37:32] 2025-06-06 07:36:27,978 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 09:37:32] 2025-06-06 07:36:27,981 | INFO     | fitting pss+swap vs Time
[2025-06-06 09:37:32] 2025-06-06 07:36:27,981 | INFO     | sum of square deviations: 605592750.0
[2025-06-06 09:37:32] 2025-06-06 07:36:27,981 | INFO     | sum of deviations: 1339668701.9999988
[2025-06-06 09:37:32] 2025-06-06 07:36:27,982 | INFO     | mean x: 1749191562.0
[2025-06-06 09:37:32] 2025-06-06 07:36:27,982 | INFO     | mean y: 2383482.944
[2025-06-06 09:37:32] 2025-06-06 07:36:27,982 | INFO     | -- intersect: -3867109983.438962
[2025-06-06 09:37:32] 2025-06-06 07:36:27,982 | INFO     | intersect: -3867109983.438962
[2025-06-06 09:37:32] 2025-06-06 07:36:27,982 | INFO     | chi2: 1.5449499419397599
[2025-06-06 09:37:32] 2025-06-06 07:36:27,982 | INFO     | sum of square deviations: 535786790.0
[2025-06-06 09:37:32] 2025-06-06 07:36:27,983 | INFO     | sum of deviations: 1258070283.0
[2025-06-06 09:37:32] 2025-06-06 07:36:27,983 | INFO     | mean x: 1749191409.5
[2025-06-06 09:37:32] 2025-06-06 07:36:27,983 | INFO     | mean y: 2383304.75
[2025-06-06 09:37:32] 2025-06-06 07:36:27,983 | INFO     | -- intersect: -4104858181.3098445
[2025-06-06 09:37:32] 2025-06-06 07:36:27,983 | INFO     | intersect: -4104858181.3098445
[2025-06-06 09:37:32] 2025-06-06 07:36:27,983 | INFO     | chi2: 1.5453348969463505
[2025-06-06 09:37:32] 2025-06-06 07:36:27,983 | INFO     | current chi2=1.5453348969463505 (change=-0.024916988967765993 %)
[2025-06-06 09:37:32] 2025-06-06 07:36:27,983 | INFO     | right removable region: 119
[2025-06-06 09:37:32] 2025-06-06 07:36:27,984 | INFO     | sum of square deviations: 535786790.0
[2025-06-06 09:37:32] 2025-06-06 07:36:27,984 | INFO     | sum of deviations: -15044779682.499996
[2025-06-06 09:37:32] 2025-06-06 07:36:27,984 | INFO     | mean x: 1749191714.5
[2025-06-06 09:37:32] 2025-06-06 07:36:27,984 | INFO     | mean y: 2418455.5083333333
[2025-06-06 09:37:32] 2025-06-06 07:36:27,984 | INFO     | -- intersect: 49119351642.88112
[2025-06-06 09:37:32] 2025-06-06 07:36:27,984 | INFO     | intersect: 49119351642.88112
[2025-06-06 09:37:32] 2025-06-06 07:36:27,984 | INFO     | chi2: 0.051299579003141194
[2025-06-06 09:37:32] 2025-06-06 07:36:27,985 | INFO     | current chi2=0.051299579003141194 (change=96.67953131615825 %)
[2025-06-06 09:37:32] 2025-06-06 07:36:27,985 | INFO     | sum of square deviations: 471562330.0
[2025-06-06 09:37:32] 2025-06-06 07:36:27,985 | INFO     | sum of deviations: -13143570265.000002
[2025-06-06 09:37:32] 2025-06-06 07:36:27,985 | INFO     | mean x: 1749191867.0
[2025-06-06 09:37:32] 2025-06-06 07:36:27,985 | INFO     | mean y: 2413930.6782608693
[2025-06-06 09:37:32] 2025-06-06 07:36:27,985 | INFO     | -- intersect: 48756575890.309425
[2025-06-06 09:37:32] 2025-06-06 07:36:27,986 | INFO     | intersect: 48756575890.309425
[2025-06-06 09:37:32] 2025-06-06 07:36:27,986 | INFO     | chi2: 0.05116994397194108
[2025-06-06 09:37:32] 2025-06-06 07:36:27,986 | INFO     | current chi2=0.05116994397194108 (change=0.25270193970242333 %)
[2025-06-06 09:37:32] 2025-06-06 07:36:27,986 | INFO     | left removable region: 20
[2025-06-06 09:37:32] 2025-06-06 07:36:27,986 | INFO     | sum of square deviations: 300842850.0
[2025-06-06 09:37:32] 2025-06-06 07:36:27,986 | INFO     | sum of deviations: -8325348198.000001
[2025-06-06 09:37:32] 2025-06-06 07:36:27,987 | INFO     | mean x: 1749191989.0
[2025-06-06 09:37:32] 2025-06-06 07:36:27,987 | INFO     | mean y: 2402395.5757575757
[2025-06-06 09:37:32] 2025-06-06 07:36:27,987 | INFO     | -- intersect: 48408513338.80472
[2025-06-06 09:37:32] 2025-06-06 07:36:27,987 | INFO     | intersect: 48408513338.80472
[2025-06-06 09:37:32] 2025-06-06 07:36:27,987 | INFO     | chi2: 0.042614613149529856
[2025-06-06 09:37:32] 2025-06-06 07:36:27,987 | INFO     | -- intersect: 48408513338.80472
[2025-06-06 09:37:32] 2025-06-06 07:36:27,987 | INFO     | current memory leak: -27.67 B/s (using 99 data points, chi2=0.04)
[2025-06-06 09:37:32] 2025-06-06 07:36:27,988 | INFO     | ..............................
[2025-06-06 09:37:32] 2025-06-06 07:36:27,988 | INFO     | . Timing measurements:
[2025-06-06 09:37:32] 2025-06-06 07:36:27,988 | INFO     | . get job = 0 s
[2025-06-06 09:37:32] 2025-06-06 07:36:27,988 | INFO     | . initial setup = 1 s
[2025-06-06 09:37:32] 2025-06-06 07:36:27,988 | INFO     | . payload setup = 5 s
[2025-06-06 09:37:32] 2025-06-06 07:36:27,988 | INFO     | . stage-in = 0 s
[2025-06-06 09:37:32] 2025-06-06 07:36:27,988 | INFO     | . payload execution = 7600 s
[2025-06-06 09:37:32] 2025-06-06 07:36:27,988 | INFO     | . stage-out = 0 s
[2025-06-06 09:37:32] 2025-06-06 07:36:27,988 | INFO     | . log creation = 0 s
[2025-06-06 09:37:32] 2025-06-06 07:36:27,988 | INFO     | ..............................
[2025-06-06 09:37:32] 2025-06-06 07:36:28,075 | INFO     | 
[2025-06-06 09:37:32] 2025-06-06 07:36:28,075 | INFO     | job summary report
[2025-06-06 09:37:32] 2025-06-06 07:36:28,075 | INFO     | --------------------------------------------------
[2025-06-06 09:37:32] 2025-06-06 07:36:28,076 | INFO     | PanDA job id: 6669135440
[2025-06-06 09:37:32] 2025-06-06 07:36:28,076 | INFO     | task id: 44871837
[2025-06-06 09:37:32] 2025-06-06 07:36:28,076 | INFO     | errors: (none)
[2025-06-06 09:37:32] 2025-06-06 07:36:28,076 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 09:37:32] 2025-06-06 07:36:28,076 | INFO     | pilot state: finished 
[2025-06-06 09:37:32] 2025-06-06 07:36:28,076 | INFO     | transexitcode: 0
[2025-06-06 09:37:32] 2025-06-06 07:36:28,076 | INFO     | exeerrorcode: 0
[2025-06-06 09:37:32] 2025-06-06 07:36:28,076 | INFO     | exeerrordiag: 
[2025-06-06 09:37:32] 2025-06-06 07:36:28,076 | INFO     | exitcode: 0
[2025-06-06 09:37:32] 2025-06-06 07:36:28,076 | INFO     | exitmsg: OK
[2025-06-06 09:37:32] 2025-06-06 07:36:28,076 | INFO     | cpuconsumptiontime: 28989 s
[2025-06-06 09:37:32] 2025-06-06 07:36:28,076 | INFO     | nevents: 400
[2025-06-06 09:37:32] 2025-06-06 07:36:28,076 | INFO     | neventsw: 0
[2025-06-06 09:37:32] 2025-06-06 07:36:28,076 | INFO     | pid: 2899172
[2025-06-06 09:37:32] 2025-06-06 07:36:28,076 | INFO     | pgrp: 2899172
[2025-06-06 09:37:32] 2025-06-06 07:36:28,076 | INFO     | corecount: 4
[2025-06-06 09:37:32] 2025-06-06 07:36:28,076 | INFO     | event service: False
[2025-06-06 09:37:32] 2025-06-06 07:36:28,076 | INFO     | sizes: {0: 2396563, 1: 2397430, 5: 2397636, 11: 2397692, 7609: 2425038, 7610: 2434001, 7611: 2434185, 7618: 2434355}
[2025-06-06 09:37:32] 2025-06-06 07:36:28,077 | INFO     | --------------------------------------------------
[2025-06-06 09:37:32] 2025-06-06 07:36:28,077 | INFO     | 
[2025-06-06 09:37:32] 2025-06-06 07:36:28,077 | INFO     | executing command: ls -lF /scratch/boinc/var/slot72/slots/0
[2025-06-06 09:37:32] 2025-06-06 07:36:28,097 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 09:37:32] 2025-06-06 07:36:28,097 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 09:37:32] 2025-06-06 07:36:28,097 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 09:37:32] 2025-06-06 07:36:28,097 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 09:37:32] 2025-06-06 07:36:28,097 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 09:37:32] 2025-06-06 07:36:28,097 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 09:37:32] 2025-06-06 07:36:28,097 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 09:37:32] 2025-06-06 07:36:28,098 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 09:37:32] 2025-06-06 07:36:28,098 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 09:37:32] 2025-06-06 07:36:28,098 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 09:37:32] 2025-06-06 07:36:28,098 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 09:37:32] 2025-06-06 07:36:28,098 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 09:37:32] 2025-06-06 07:36:28,098 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 09:37:32] 2025-06-06 07:36:28,098 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 09:37:32] 2025-06-06 07:36:28,098 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 09:37:32] 2025-06-06 07:36:28,098 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 09:37:32] 2025-06-06 07:36:28,098 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 09:37:32] 2025-06-06 07:36:28,098 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 09:37:32] 2025-06-06 07:36:28,098 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 09:37:32] 2025-06-06 07:36:28,098 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 09:37:32] 2025-06-06 07:36:28,098 | INFO     | job 6669135440 has completed (purged errors)
[2025-06-06 09:37:32] 2025-06-06 07:36:28,098 | INFO     | overall cleanup function is called
[2025-06-06 09:37:32] 2025-06-06 07:36:29,107 | INFO     | --- collectZombieJob: --- 10, [2899172]
[2025-06-06 09:37:32] 2025-06-06 07:36:29,107 | INFO     | zombie collector waiting for pid 2899172
[2025-06-06 09:37:32] 2025-06-06 07:36:29,107 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 09:37:32] 2025-06-06 07:36:29,107 | INFO     | collected zombie processes
[2025-06-06 09:37:32] 2025-06-06 07:36:29,107 | INFO     | will attempt to kill all subprocesses of pid=2899172
[2025-06-06 09:37:32] 2025-06-06 07:36:29,497 | INFO     | process IDs to be killed: [2899172] (in reverse order)
[2025-06-06 09:37:32] 2025-06-06 07:36:29,630 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 09:37:32] 2025-06-06 07:36:29,630 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 09:37:32] 2025-06-06 07:36:29,647 | INFO     | did not find any defunct processes belonging to 2899172
[2025-06-06 09:37:32] 2025-06-06 07:36:29,660 | INFO     | did not find any defunct processes belonging to 2899172
[2025-06-06 09:37:32] 2025-06-06 07:36:29,660 | INFO     | ready for new job
[2025-06-06 09:37:32] 2025-06-06 07:36:29,660 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 09:37:32] 2025-06-06 07:36:29,662 | INFO     | **************************************
[2025-06-06 09:37:32] 2025-06-06 07:36:29,662 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 09:37:32] 2025-06-06 07:36:29,662 | INFO     | **************************************
[2025-06-06 09:37:32] 2025-06-06 07:36:29,662 | INFO     | 
[2025-06-06 09:37:32] 2025-06-06 07:36:29,668 | INFO     | architecture information:
[2025-06-06 09:37:32] 2025-06-06 07:36:29,668 | INFO     | executing command: cat /etc/os-release
[2025-06-06 09:37:32] 2025-06-06 07:36:29,683 | INFO     | cat /etc/os-release:
[2025-06-06 09:37:32] NAME="CentOS Linux"
[2025-06-06 09:37:32] VERSION="7 (Core)"
[2025-06-06 09:37:32] ID="centos"
[2025-06-06 09:37:32] ID_LIKE="rhel fedora"
[2025-06-06 09:37:32] VERSION_ID="7"
[2025-06-06 09:37:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 09:37:32] ANSI_COLOR="0;31"
[2025-06-06 09:37:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 09:37:32] HOME_URL="https://www.centos.org/"
[2025-06-06 09:37:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 09:37:32] 
[2025-06-06 09:37:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 09:37:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 09:37:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 09:37:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 09:37:32] 
[2025-06-06 09:37:32] 2025-06-06 07:36:29,684 | INFO     | **************************************
[2025-06-06 09:37:32] 2025-06-06 07:36:30,186 | INFO     | executing command: df -mP /scratch/boinc/var/slot72/slots/0
[2025-06-06 09:37:32] 2025-06-06 07:36:30,204 | INFO     | sufficient remaining disk space (3307461410816 B)
[2025-06-06 09:37:32] 2025-06-06 07:36:30,204 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 09:37:32] 2025-06-06 07:36:30,204 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 09:37:32] 2025-06-06 07:36:30,205 | INFO     | update_server=False
[2025-06-06 09:37:32] 2025-06-06 07:36:30,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 09:37:32] 2025-06-06 07:36:30,351 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 09:37:32] 2025-06-06 07:36:30,352 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 09:37:32] 2025-06-06 07:36:30,352 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:37:32] 2025-06-06 07:36:30,352 | INFO     | will abort loop
[2025-06-06 09:37:32] 2025-06-06 07:36:30,405 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 09:37:32] 2025-06-06 07:36:30,405 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 09:37:32] 2025-06-06 07:36:30,405 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 09:37:32] 2025-06-06 07:36:30,490 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 09:37:32] 2025-06-06 07:36:30,577 | INFO     | all payload control threads have been joined
[2025-06-06 09:37:32] 2025-06-06 07:36:30,677 | INFO     | all data control threads have been joined
[2025-06-06 09:37:32] 2025-06-06 07:36:31,006 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 09:37:32] 2025-06-06 07:36:31,124 | INFO     | all job control threads have been joined
[2025-06-06 09:37:32] 2025-06-06 07:36:31,210 | INFO     | [job] retrieve thread has finished
[2025-06-06 09:37:32] 2025-06-06 07:36:31,295 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 09:37:32] 2025-06-06 07:36:31,357 | INFO     | [job] job monitor thread has finished
[2025-06-06 09:37:32] 2025-06-06 07:36:31,490 | INFO     | [payload] validate_post thread has finished
[2025-06-06 09:37:32] 2025-06-06 07:36:31,583 | INFO     | [payload] control thread has finished
[2025-06-06 09:37:32] 2025-06-06 07:36:31,682 | INFO     | [data] control thread has finished
[2025-06-06 09:37:32] 2025-06-06 07:36:32,038 | INFO     | [job] validate thread has finished
[2025-06-06 09:37:32] 2025-06-06 07:36:32,039 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 09:37:32] 2025-06-06 07:36:32,130 | INFO     | [job] control thread has finished
[2025-06-06 09:37:32] 2025-06-06 07:36:32,201 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 09:37:32] 2025-06-06 07:36:32,279 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 09:37:32] 2025-06-06 07:36:32,318 | INFO     | [data] copytool_in thread has finished
[2025-06-06 09:37:32] 2025-06-06 07:36:32,346 | INFO     | [payload] failed_post thread has finished
[2025-06-06 09:37:32] 2025-06-06 07:36:32,496 | INFO     | [data] copytool_out thread has finished
[2025-06-06 09:37:32] 2025-06-06 07:36:33,086 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:37:32] 2025-06-06 07:36:34,092 | INFO     | [job] queue monitor thread has finished
[2025-06-06 09:37:32] 2025-06-06 07:36:35,012 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 09:37:32] 2025-06-06 07:36:36,225 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23335359653696)>', '<ExcThread(monitor, started 23335123519232)>']
[2025-06-06 09:37:32] 2025-06-06 07:36:36,436 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 09:37:32] 2025-06-06 07:36:36,437 | INFO     | [monitor] control thread has ended
[2025-06-06 09:37:32] 2025-06-06 07:36:41,251 | INFO     | all workflow threads have been joined
[2025-06-06 09:37:32] 2025-06-06 07:36:41,251 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 09:37:32] 2025-06-06 07:36:41,252 | INFO     | traces error code: 0
[2025-06-06 09:37:32] 2025-06-06 07:36:41,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 09:37:32] 2025-06-06 07:36:41,413 [wrapper] ==== pilot stdout END ====
[2025-06-06 09:37:32] 2025-06-06 07:36:41,417 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 09:37:32] 2025-06-06 07:36:41,420 [wrapper] pilotpid: 2891446
[2025-06-06 09:37:32] 2025-06-06 07:36:41,422 [wrapper] Pilot exit status: 0
[2025-06-06 09:37:32] 2025-06-06 07:36:41,434 [wrapper] pandaids: 6669135440
[2025-06-06 09:37:32] 2025-06-06 07:36:41,529 [wrapper] cleanup supervisor_pilot 3077439 2891447
[2025-06-06 09:37:32] 2025-06-06 07:36:41,531 [wrapper] Test setup, not cleaning
[2025-06-06 09:37:32] 2025-06-06 07:36:41,535 [wrapper] apfmon messages muted
[2025-06-06 09:37:32] 2025-06-06 07:36:41,538 [wrapper] ==== wrapper stdout END ====
[2025-06-06 09:37:32] 2025-06-06 07:36:41,540 [wrapper] ==== wrapper stderr END ====
[2025-06-06 09:37:32]  *** Error codes and diagnostics ***
[2025-06-06 09:37:32]     "exeErrorCode": 0,
[2025-06-06 09:37:32]     "exeErrorDiag": "",
[2025-06-06 09:37:32]     "pilotErrorCode": 0,
[2025-06-06 09:37:32]     "pilotErrorDiag": "",
[2025-06-06 09:37:32]  *** Listing of results directory ***
[2025-06-06 09:37:32] total 624280
[2025-06-06 09:37:32] -rw-r--r-- 1 boinc boinc    495897 May 29 05:09 pilot3.tar.gz
[2025-06-06 09:37:32] -rwx------ 1 boinc boinc     37140 May 29 05:12 runpilot2-wrapper.sh
[2025-06-06 09:37:32] -rw-r--r-- 1 boinc boinc      5111 May 29 05:12 queuedata.json
[2025-06-06 09:37:32] -rw-r--r-- 1 boinc boinc       100 Jun  5 10:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 09:37:32] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 10:38 run_atlas
[2025-06-06 09:37:32] -rw-r--r-- 1 boinc boinc       105 Jun  5 10:38 job.xml
[2025-06-06 09:37:32] -rw------- 2 boinc boinc 213581824 Jun  5 11:17 copy_jUTMnf
[2025-06-06 09:37:32] -rw-r--r-- 2 boinc boinc 222706035 Jun  6 07:29 EVNT.44871834._003658.pool.root.1
[2025-06-06 09:37:32] -rw-r--r-- 1 boinc boinc      6687 Jun  6 07:29 init_data.xml
[2025-06-06 09:37:32] -rw-r--r-- 2 boinc boinc     15093 Jun  6 07:29 start_atlas.sh
[2025-06-06 09:37:32] drwxrwx--x 2 boinc boinc      4096 Jun  6 07:29 shared
[2025-06-06 09:37:32] -rw-r--r-- 2 boinc boinc    508879 Jun  6 07:29 input.tar.gz
[2025-06-06 09:37:32] -rw-r--r-- 1 boinc boinc         0 Jun  6 07:29 boinc_lockfile
[2025-06-06 09:37:32] -rw-r--r-- 1 boinc boinc      2558 Jun  6 07:29 pandaJob.out
[2025-06-06 09:37:32] -rw------- 1 boinc boinc    988109 Jun  6 07:29 agis_schedconf.cvmfs.json
[2025-06-06 09:37:32] -rw------- 1 boinc boinc   1598969 Jun  6 07:29 agis_ddmendpoints.agis.ALL.json
[2025-06-06 09:37:32] drwx------ 4 boinc boinc      4096 Jun  6 07:29 pilot3
[2025-06-06 09:37:32] -rw------- 1 boinc boinc        95 Jun  6 09:35 pilot_heartbeat.json
[2025-06-06 09:37:32] -rw------- 1 boinc boinc 197161688 Jun  6 09:35 HITS.44871837._094091.pool.root.1
[2025-06-06 09:37:32] -rw-r--r-- 1 boinc boinc       530 Jun  6 09:35 boinc_task_state.xml
[2025-06-06 09:37:32] -rw------- 1 boinc boinc      1028 Jun  6 09:36 memory_monitor_summary.json
[2025-06-06 09:37:32] -rw------- 1 boinc boinc    266877 Jun  6 09:36 log.44871837._094091.job.log.tgz.1
[2025-06-06 09:37:32] -rw------- 1 boinc boinc      7699 Jun  6 09:36 heartbeat.json
[2025-06-06 09:37:32] -rw------- 1 boinc boinc      4550 Jun  6 09:36 pilotlog.txt
[2025-06-06 09:37:32] -rw------- 1 boinc boinc    719633 Jun  6 09:36 log.44871837._094091.job.log.1
[2025-06-06 09:37:32] -rw------- 1 boinc boinc       357 Jun  6 09:36 output.list
[2025-06-06 09:37:32] -rw-r--r-- 1 boinc boinc       620 Jun  6 09:36 runtime_log
[2025-06-06 09:37:32] -rw------- 1 boinc boinc   1003520 Jun  6 09:36 result.tar.gz
[2025-06-06 09:37:32] -rw------- 1 boinc boinc       662 Jun  6 09:36 zqvMDmprie7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6edKDm54BTIo.diag
[2025-06-06 09:37:32] -rw-r--r-- 1 boinc boinc      9025 Jun  6 09:36 runtime_log.err
[2025-06-06 09:37:32] -rw-r--r-- 1 boinc boinc        27 Jun  6 09:37 wrapper_checkpoint.txt
[2025-06-06 09:37:32] -rw-r--r-- 1 boinc boinc      8192 Jun  6 09:37 boinc_mmap_file
[2025-06-06 09:37:32] -rw-r--r-- 1 boinc boinc     20908 Jun  6 09:37 stderr.txt
[2025-06-06 09:37:32] HITS file was successfully produced:
[2025-06-06 09:37:32] -rw------- 1 boinc boinc 197161688 Jun  6 09:35 shared/HITS.pool.root.1
[2025-06-06 09:37:32]  *** Contents of shared directory: ***
[2025-06-06 09:37:32] total 620116
[2025-06-06 09:37:32] -rw------- 2 boinc boinc 213581824 Jun  5 11:17 copy_jUTMnf
[2025-06-06 09:37:32] -rw-r--r-- 2 boinc boinc 222706035 Jun  6 07:29 ATLAS.root_0
[2025-06-06 09:37:32] -rw-r--r-- 2 boinc boinc     15093 Jun  6 07:29 start_atlas.sh
[2025-06-06 09:37:32] -rw-r--r-- 2 boinc boinc    508879 Jun  6 07:29 input.tar.gz
[2025-06-06 09:37:32] -rw------- 1 boinc boinc 197161688 Jun  6 09:35 HITS.pool.root.1
[2025-06-06 09:37:32] -rw------- 1 boinc boinc   1003520 Jun  6 09:36 result.tar.gz
09:37:33 (2887169): run_atlas exited; CPU time 29290.121179
09:37:33 (2887169): called boinc_finish(0)

</stderr_txt>
]]>

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