Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-30 06:03:49 (171100): Detected: vboxwrapper 26206
2025-05-30 06:03:49 (171100): Detected: BOINC client v8.0.2
2025-05-30 06:03:50 (171100): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-05-30 06:03:50 (171100): Successfully copied 'init_data.xml' to the shared directory.
2025-05-30 06:03:51 (171100): Create VM. (boinc_a01a9a692b3dbd60, slot#0)
2025-05-30 06:03:51 (171100): Setting Memory Size for VM. (4800MB)
2025-05-30 06:03:51 (171100): Setting CPU Count for VM. (8)
2025-05-30 06:03:52 (171100): Setting Chipset Options for VM.
2025-05-30 06:03:52 (171100): Setting Graphics Controller Options for VM.
2025-05-30 06:03:52 (171100): Setting Boot Options for VM.
2025-05-30 06:03:52 (171100): Setting Network Configuration for NAT.
2025-05-30 06:03:53 (171100): Enabling VM Network Access.
2025-05-30 06:03:53 (171100): Disabling USB Support for VM.
2025-05-30 06:03:53 (171100): Disabling COM Port Support for VM.
2025-05-30 06:03:53 (171100): Disabling LPT Port Support for VM.
2025-05-30 06:03:54 (171100): Disabling Audio Support for VM.
2025-05-30 06:03:54 (171100): Disabling Clipboard Support for VM.
2025-05-30 06:03:55 (171100): Disabling Drag and Drop Support for VM.
2025-05-30 06:03:55 (171100): Adding storage controller(s) to VM.
2025-05-30 06:03:55 (171100): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-30 06:03:58 (171100): Adding VirtualBox Guest Additions to VM.
2025-05-30 06:03:58 (171100): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-30 06:03:58 (171100): forwarding host port 57716 to guest port 80
2025-05-30 06:03:59 (171100): Enabling remote desktop for VM.
2025-05-30 06:03:59 (171100): Required extension pack not installed, remote desktop not enabled.
2025-05-30 06:03:59 (171100): Enabling shared directory for VM.
2025-05-30 06:03:59 (171100): Starting VM using VBoxManage interface. (boinc_a01a9a692b3dbd60, slot#0)
2025-05-30 06:04:05 (171100): Successfully started VM. (PID = '171448')
2025-05-30 06:04:05 (171100): Reporting VM Process ID to BOINC.
2025-05-30 06:04:05 (171100): Guest Log: BIOS: VirtualBox 7.0.6
2025-05-30 06:04:05 (171100): Guest Log: CPUID EDX: 0x178bfbff
2025-05-30 06:04:05 (171100): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-30 06:04:05 (171100): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000006e8e140 sectors
2025-05-30 06:04:05 (171100): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-30 06:04:05 (171100): Detected: Web Application Enabled (http://localhost:57716)
2025-05-30 06:04:05 (171100): Preference change detected
2025-05-30 06:04:05 (171100): Setting CPU throttle for VM. (100%)
2025-05-30 06:04:05 (171100): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-30 06:04:07 (171100): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-30 06:04:07 (171100): Guest Log: BIOS: Booting from Hard Disk...
2025-05-30 06:04:10 (171100): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-30 06:04:10 (171100): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-30 06:04:10 (171100): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-30 06:04:18 (171100): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-30 06:04:18 (171100): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-30 06:04:28 (171100): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-30 06:04:28 (171100): Guest Log: 00:00:00.000133 main     Log opened 2025-05-30T06:04:26.109764000Z
2025-05-30 06:04:28 (171100): Guest Log: 00:00:00.000213 main     OS Product: Linux
2025-05-30 06:04:28 (171100): Guest Log: 00:00:00.000259 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-30 06:04:28 (171100): Guest Log: 00:00:00.000287 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-30 06:04:28 (171100): Guest Log: 00:00:00.000318 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-30 06:04:28 (171100): Guest Log: 00:00:00.000319 main     Process ID: 1369
2025-05-30 06:04:28 (171100): Guest Log: 00:00:00.000319 main     Package type: LINUX_64BITS_GENERIC
2025-05-30 06:04:28 (171100): Guest Log: 00:00:00.001188 main     5.2.32 r132073 started. Verbose level = 0
2025-05-30 06:04:28 (171100): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-30 06:04:28 (171100): Guest Log: [INFO] Mounting shared directory
2025-05-30 06:04:28 (171100): Guest Log: [INFO] Checking for init_data.xml
2025-05-30 06:04:38 (171100): Guest Log: 00:00:10.004192 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 376 503 000ns (GuestNow=1 748 581 477 736 546 000 ns GuestLast=1 748 585 066 113 049 000 ns fSetTimeLastLoop=true )
2025-05-30 06:04:51 (171100): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-30 06:04:51 (171100): Guest Log: [INFO] Detected branch: prod
2025-05-30 06:04:53 (171100): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-30 06:04:53 (171100): Guest Log: Copying input files
2025-05-30 06:04:55 (171100): Guest Log: Copied input files into RunAtlas.
2025-05-30 06:04:55 (171100): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-30 06:04:55 (171100): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-30 06:04:55 (171100): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-30 06:04:55 (171100): Guest Log: Further information can be found at the LHC@home message board.
2025-05-30 06:05:10 (171100): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-30 06:05:12 (171100): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-30 06:05:12 (171100): Guest Log: 2.6.3.0 1651 0 32040 146587 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-30 06:05:14 (171100): Guest Log: copied the webapp to /var/www
2025-05-30 06:05:14 (171100): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-30 06:05:14 (171100): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-30 06:05:17 (171100): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-30 06:05:17 (171100): Guest Log:  *** Starting ATLAS job. (PandaID=6669443269 taskID=44871837) ***
2025-05-30 07:53:50 (171100): Status Report: Elapsed Time: '6000.711227'
2025-05-30 07:53:50 (171100): Status Report: CPU Time: '47062.397280'
2025-05-30 08:19:34 (171100): Guest Log:  *** Job finished ***
2025-05-30 08:19:34 (171100): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:21,046 | INFO     | [data] queue_monitor thread has finished
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:24,836 | INFO     | job.realtimelogging is not enabled
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:25,838 | INFO     | [payload] run_realtimelog thread has finished
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:27,835 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157621802816)>', '<ExcThread(monitor, started 140156443023104)>']
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:28,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:28,230 | INFO     | [monitor] control thread has ended
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:32,911 | INFO     | all workflow threads have been joined
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:32,911 | INFO     | end of generic workflow (traces error code: 0)
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:32,912 | INFO     | traces error code: 0
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:32,913 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:33,104 [wrapper] ==== pilot stdout END ====
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:33,124 [wrapper] ==== wrapper stdout RESUME ====
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:33,141 [wrapper] pilotpid: 6018
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:33,159 [wrapper] Pilot exit status: 0
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:33,291 [wrapper] pandaids: 6669443269
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:33,352 [wrapper] cleanup supervisor_pilot  4671 6019
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:33,359 [wrapper] Test setup, not cleaning
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:33,365 [wrapper] apfmon messages muted
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:33,370 [wrapper] ==== wrapper stdout END ====
2025-05-30 08:19:34 (171100): Guest Log: 2025-05-30 07:19:33,376 [wrapper] ==== wrapper stderr END ====
2025-05-30 08:19:34 (171100): Guest Log:  *** Error codes and diagnostics ***
2025-05-30 08:19:34 (171100): Guest Log:     "exeErrorCode": 0,
2025-05-30 08:19:34 (171100): Guest Log:     "exeErrorDiag": "",
2025-05-30 08:19:34 (171100): Guest Log:     "pilotErrorCode": 0,
2025-05-30 08:19:34 (171100): Guest Log:     "pilotErrorDiag": "",
2025-05-30 08:19:34 (171100): Guest Log:  *** Listing of results directory ***
2025-05-30 08:19:34 (171100): Guest Log: total 203528
2025-05-30 08:19:34 (171100): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 29 06:19 pilot3.tar.gz
2025-05-30 08:19:34 (171100): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 29 06:25 queuedata.json
2025-05-30 08:19:34 (171100): Guest Log: -rwx------. 1 atlas atlas     37140 May 29 06:25 runpilot2-wrapper.sh
2025-05-30 08:19:34 (171100): Guest Log: -rwxr-xr-x. 1 atlas atlas      8984 May 30 05:04 init_data.xml
2025-05-30 08:19:34 (171100): Guest Log: -rwxr-xr-x. 1 atlas atlas    508875 May 30 05:04 input.tar.gz
2025-05-30 08:19:34 (171100): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 30 05:04 start_atlas.sh
2025-05-30 08:19:34 (171100): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 30 05:04 EVNT.44871834._003794.pool.root.1 -> /data/./ATLAS.root_0
2025-05-30 08:19:34 (171100): Guest Log: -rw-r--r--. 1 atlas atlas      2559 May 30 05:05 pandaJob.out
2025-05-30 08:19:34 (171100): Guest Log: -rw-------. 1 atlas atlas    992366 May 30 05:07 agis_schedconf.cvmfs.json
2025-05-30 08:19:34 (171100): Guest Log: -rw-------. 1 atlas atlas   1603667 May 30 05:07 agis_ddmendpoints.agis.ALL.json
2025-05-30 08:19:34 (171100): Guest Log: drwx------. 4 atlas atlas      4096 May 30 05:07 pilot3
2025-05-30 08:19:34 (171100): Guest Log: -rw-------. 1 atlas atlas 202697048 May 30 07:18 HITS.44871837._096272.pool.root.1
2025-05-30 08:19:34 (171100): Guest Log: -rw-------. 1 atlas atlas        95 May 30 07:18 pilot_heartbeat.json
2025-05-30 08:19:34 (171100): Guest Log: -rw-------. 1 atlas atlas      1032 May 30 07:18 memory_monitor_summary.json
2025-05-30 08:19:34 (171100): Guest Log: -rw-------. 1 atlas atlas    326658 May 30 07:18 log.44871837._096272.job.log.tgz.1
2025-05-30 08:19:34 (171100): Guest Log: -rw-------. 1 atlas atlas      7726 May 30 07:19 heartbeat.json
2025-05-30 08:19:34 (171100): Guest Log: -rw-------. 1 atlas atlas      4485 May 30 07:19 pilotlog.txt
2025-05-30 08:19:34 (171100): Guest Log: -rw-------. 1 atlas atlas    642404 May 30 07:19 log.44871837._096272.job.log.1
2025-05-30 08:19:34 (171100): Guest Log: -rw-------. 1 atlas atlas       357 May 30 07:19 output.list
2025-05-30 08:19:34 (171100): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 30 07:19 runtime_log
2025-05-30 08:19:34 (171100): Guest Log: -rw-------. 1 atlas atlas    993280 May 30 07:19 result.tar.gz
2025-05-30 08:19:34 (171100): Guest Log: -rw-r--r--. 1 atlas atlas      8595 May 30 07:19 runtime_log.err
2025-05-30 08:19:34 (171100): Guest Log: -rw-------. 1 atlas atlas       654 May 30 07:19 n1MMDmysle7n9Rq4apOajLDm4fhM0noT9bVof3QYDmElUKDmT3gIym.diag
2025-05-30 08:19:34 (171100): Guest Log: Looking for outputfile HITS.44871837._096272.pool.root.1
2025-05-30 08:19:34 (171100): Guest Log: HITS file was successfully produced
2025-05-30 08:19:34 (171100): Guest Log: -rw-------. 1 atlas atlas 202697048 May 30 07:18 /home/atlas/RunAtlas/HITS.44871837._096272.pool.root.1
2025-05-30 08:19:35 (171100): Guest Log: Successfully finished the ATLAS job!
2025-05-30 08:19:35 (171100): Guest Log: Copying the results back to the shared directory!
2025-05-30 08:19:35 (171100): Guest Log:  *** Contents of shared directory: ***
2025-05-30 08:19:36 (171100): Guest Log: total 417752
2025-05-30 08:19:36 (171100): Guest Log: -rwxrwxrwx. 1 root root 223542888 May 30 05:03 ATLAS.root_0
2025-05-30 08:19:36 (171100): Guest Log: -rwxrwxrwx. 1 root root 202697048 May 30 07:19 HITS.pool.root.1
2025-05-30 08:19:36 (171100): Guest Log: -rwxrwxrwx. 1 root root      8984 May 30 05:03 init_data.xml
2025-05-30 08:19:36 (171100): Guest Log: -rwxrwxrwx. 1 root root    508875 May 29 09:26 input.tar.gz
2025-05-30 08:19:36 (171100): Guest Log: -rwxrwxrwx. 1 root root    993280 May 30 07:19 result.tar.gz
2025-05-30 08:19:36 (171100): Guest Log: -rwxrwxrwx. 1 root root     15093 May 29 09:26 start_atlas.sh
2025-05-30 08:19:36 (171100): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-30 08:19:36 (171100): VM Completion File Detected.
2025-05-30 08:19:36 (171100): Powering off VM.
2025-05-30 08:19:37 (171100): Successfully stopped VM.
2025-05-30 08:19:37 (171100): Deregistering VM. (boinc_a01a9a692b3dbd60, slot#0)
2025-05-30 08:19:37 (171100): Removing network bandwidth throttle group from VM.
2025-05-30 08:19:37 (171100): Removing VM from VirtualBox.
08:19:42 (171100): called boinc_finish(0)

</stderr_txt>
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