Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:03:03 (2561788): wrapper (7.7.26015): starting
04:03:03 (2561788): wrapper: running run_atlas (--nthreads 10)
[2025-05-29 04:03:03] Arguments: --nthreads 10
[2025-05-29 04:03:03] Threads: 10
[2025-05-29 04:03:03] Checking for CVMFS
[2025-05-29 04:03:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 04:03:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 04:03:05] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 04:03:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 04:03:06] 2.12.6.0 41504 29602 426208 146547 0 661 22768826 32935937 15960 16776704 0 129347118 99.692 102614997 11105 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-05-29 04:03:06] CVMFS is ok
[2025-05-29 04:03:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-29 04:03:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-29 04:03:06] Further information can be found at the LHC@home message board.
[2025-05-29 04:03:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 04:03:06] Checking for apptainer binary...
[2025-05-29 04:03:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 04:03:06] Running /usr/bin/apptainer --version
[2025-05-29 04:03:06] apptainer version 1.4.1-1.el9
[2025-05-29 04:03:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 04:03:08] c-5-4.aglt2.org
[2025-05-29 04:03:08] apptainer works
[2025-05-29 04:03:09] Set ATHENA_PROC_NUMBER=10
[2025-05-29 04:03:09] Set ATHENA_CORE_NUMBER=10
[2025-05-29 04:03:09] Starting ATLAS job with PandaID=6669090031
[2025-05-29 04:03:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-29 14:02:12]  *** The last 200 lines of the pilot log: ***
[2025-05-29 14:02:12] 2025-05-29 18:01:58,065 | INFO     | sum of deviations: 567392051662.1636
[2025-05-29 14:02:12] 2025-05-29 18:01:58,065 | INFO     | mean x: 1748523757.3754325
[2025-05-29 14:02:12] 2025-05-29 18:01:58,065 | INFO     | mean y: 2174995.8425605535
[2025-05-29 14:02:12] 2025-05-29 18:01:58,065 | INFO     | -- intersect: -16566865099.15659
[2025-05-29 14:02:12] 2025-05-29 18:01:58,065 | INFO     | intersect: -16566865099.15659
[2025-05-29 14:02:12] 2025-05-29 18:01:58,066 | INFO     | chi2: 6.335120588128221
[2025-05-29 14:02:12] 2025-05-29 18:01:58,067 | INFO     | current chi2=6.335120588128221 (change=10.20062241756275 %)
[2025-05-29 14:02:12] 2025-05-29 18:01:58,067 | INFO     | right removable region: 577
[2025-05-29 14:02:12] 2025-05-29 18:01:58,068 | INFO     | sum of square deviations: 59876333341.53122
[2025-05-29 14:02:12] 2025-05-29 18:01:58,078 | INFO     | sum of deviations: 378458234441.2595
[2025-05-29 14:02:12] 2025-05-29 18:01:58,078 | INFO     | mean x: 1748524062.3754325
[2025-05-29 14:02:12] 2025-05-29 18:01:58,078 | INFO     | mean y: 2185923.961937716
[2025-05-29 14:02:12] 2025-05-29 18:01:58,078 | INFO     | -- intersect: -11049648625.594034
[2025-05-29 14:02:12] 2025-05-29 18:01:58,078 | INFO     | intersect: -11049648625.594034
[2025-05-29 14:02:12] 2025-05-29 18:01:58,079 | INFO     | chi2: 3.835796238894584
[2025-05-29 14:02:12] 2025-05-29 18:01:58,080 | INFO     | current chi2=3.835796238894584 (change=45.62816761037228 %)
[2025-05-29 14:02:12] 2025-05-29 18:01:58,080 | INFO     | sum of square deviations: 58335745856.6912
[2025-05-29 14:02:12] 2025-05-29 18:01:58,090 | INFO     | sum of deviations: 280434033800.1153
[2025-05-29 14:02:12] 2025-05-29 18:01:58,091 | INFO     | mean x: 1748524214.8795812
[2025-05-29 14:02:12] 2025-05-29 18:01:58,091 | INFO     | mean y: 2195622.4799301918
[2025-05-29 14:02:12] 2025-05-29 18:01:58,091 | INFO     | -- intersect: -8403383008.167116
[2025-05-29 14:02:12] 2025-05-29 18:01:58,091 | INFO     | intersect: -8403383008.167116
[2025-05-29 14:02:12] 2025-05-29 18:01:58,092 | INFO     | chi2: 2.5863506172679753
[2025-05-29 14:02:12] 2025-05-29 18:01:58,092 | INFO     | current chi2=2.5863506172679753 (change=32.57330535332813 %)
[2025-05-29 14:02:12] 2025-05-29 18:01:58,093 | INFO     | sum of square deviations: 56821915261.61798
[2025-05-29 14:02:12] 2025-05-29 18:01:58,103 | INFO     | sum of deviations: 202062208553.98633
[2025-05-29 14:02:12] 2025-05-29 18:01:58,104 | INFO     | mean x: 1748524367.3785212
[2025-05-29 14:02:12] 2025-05-29 18:01:58,104 | INFO     | mean y: 2203518.5070422534
[2025-05-29 14:02:12] 2025-05-29 18:01:58,104 | INFO     | -- intersect: -6215656153.351287
[2025-05-29 14:02:12] 2025-05-29 18:01:58,104 | INFO     | intersect: -6215656153.351287
[2025-05-29 14:02:12] 2025-05-29 18:01:58,105 | INFO     | chi2: 1.800574974735638
[2025-05-29 14:02:12] 2025-05-29 18:01:58,105 | INFO     | current chi2=1.800574974735638 (change=30.381636475969025 %)
[2025-05-29 14:02:12] 2025-05-29 18:01:58,106 | INFO     | sum of square deviations: 55334503642.54383
[2025-05-29 14:02:12] 2025-05-29 18:01:58,115 | INFO     | sum of deviations: 135723469541.3551
[2025-05-29 14:02:12] 2025-05-29 18:01:58,116 | INFO     | mean x: 1748524519.8774424
[2025-05-29 14:02:12] 2025-05-29 18:01:58,116 | INFO     | mean y: 2210314.4689165186
[2025-05-29 14:02:12] 2025-05-29 18:01:58,116 | INFO     | -- intersect: -4286538997.3336883
[2025-05-29 14:02:12] 2025-05-29 18:01:58,116 | INFO     | intersect: -4286538997.3336883
[2025-05-29 14:02:12] 2025-05-29 18:01:58,117 | INFO     | chi2: 1.2255653013730239
[2025-05-29 14:02:12] 2025-05-29 18:01:58,117 | INFO     | current chi2=1.2255653013730239 (change=31.934780913360054 %)
[2025-05-29 14:02:12] 2025-05-29 18:01:58,118 | INFO     | sum of square deviations: 53873313268.718544
[2025-05-29 14:02:12] 2025-05-29 18:01:58,128 | INFO     | sum of deviations: 95928931375.5
[2025-05-29 14:02:12] 2025-05-29 18:01:58,128 | INFO     | mean x: 1748524672.374552
[2025-05-29 14:02:12] 2025-05-29 18:01:58,128 | INFO     | mean y: 2214469.5
[2025-05-29 14:02:12] 2025-05-29 18:01:58,128 | INFO     | -- intersect: -3111277037.2861915
[2025-05-29 14:02:12] 2025-05-29 18:01:58,128 | INFO     | intersect: -3111277037.2861915
[2025-05-29 14:02:12] 2025-05-29 18:01:58,129 | INFO     | chi2: 1.0294221249539843
[2025-05-29 14:02:12] 2025-05-29 18:01:58,129 | INFO     | current chi2=1.0294221249539843 (change=16.004302357393495 %)
[2025-05-29 14:02:12] 2025-05-29 18:01:58,130 | INFO     | left removable region: 50
[2025-05-29 14:02:12] 2025-05-29 18:01:58,130 | INFO     | sum of square deviations: 45383710254.06484
[2025-05-29 14:02:12] 2025-05-29 18:01:58,139 | INFO     | sum of deviations: 90114596937.99997
[2025-05-29 14:02:12] 2025-05-29 18:01:58,139 | INFO     | mean x: 1748525251.903226
[2025-05-29 14:02:12] 2025-05-29 18:01:58,140 | INFO     | mean y: 2224037.6470588236
[2025-05-29 14:02:12] 2025-05-29 18:01:58,140 | INFO     | -- intersect: -3469674743.4152794
[2025-05-29 14:02:12] 2025-05-29 18:01:58,140 | INFO     | intersect: -3469674743.4152794
[2025-05-29 14:02:12] 2025-05-29 18:01:58,141 | INFO     | chi2: 0.25658470144007955
[2025-05-29 14:02:12] 2025-05-29 18:01:58,141 | INFO     | -- intersect: -3469674743.4152794
[2025-05-29 14:02:12] 2025-05-29 18:01:58,141 | INFO     | current memory leak: 1.99 B/s (using 527 data points, chi2=0.26)
[2025-05-29 14:02:12] 2025-05-29 18:01:58,142 | INFO     | ..............................
[2025-05-29 14:02:12] 2025-05-29 18:01:58,142 | INFO     | . Timing measurements:
[2025-05-29 14:02:12] 2025-05-29 18:01:58,142 | INFO     | . get job = 1 s
[2025-05-29 14:02:12] 2025-05-29 18:01:58,143 | INFO     | . initial setup = 9 s
[2025-05-29 14:02:12] 2025-05-29 18:01:58,143 | INFO     | . payload setup = 89 s
[2025-05-29 14:02:12] 2025-05-29 18:01:58,143 | INFO     | . stage-in = 0 s
[2025-05-29 14:02:12] 2025-05-29 18:01:58,143 | INFO     | . payload execution = 35595 s
[2025-05-29 14:02:12] 2025-05-29 18:01:58,143 | INFO     | . stage-out = 2 s
[2025-05-29 14:02:12] 2025-05-29 18:01:58,143 | INFO     | . log creation = 0 s
[2025-05-29 14:02:12] 2025-05-29 18:01:58,143 | INFO     | ..............................
[2025-05-29 14:02:12] 2025-05-29 18:01:58,267 | INFO     | 
[2025-05-29 14:02:12] 2025-05-29 18:01:58,268 | INFO     | job summary report
[2025-05-29 14:02:12] 2025-05-29 18:01:58,268 | INFO     | --------------------------------------------------
[2025-05-29 14:02:12] 2025-05-29 18:01:58,268 | INFO     | PanDA job id: 6669090031
[2025-05-29 14:02:12] 2025-05-29 18:01:58,268 | INFO     | task id: 44871837
[2025-05-29 14:02:12] 2025-05-29 18:01:58,268 | INFO     | errors: (none)
[2025-05-29 14:02:12] 2025-05-29 18:01:58,268 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-29 14:02:12] 2025-05-29 18:01:58,269 | INFO     | pilot state: finished 
[2025-05-29 14:02:12] 2025-05-29 18:01:58,269 | INFO     | transexitcode: 0
[2025-05-29 14:02:12] 2025-05-29 18:01:58,269 | INFO     | exeerrorcode: 0
[2025-05-29 14:02:12] 2025-05-29 18:01:58,269 | INFO     | exeerrordiag: 
[2025-05-29 14:02:12] 2025-05-29 18:01:58,269 | INFO     | exitcode: 0
[2025-05-29 14:02:12] 2025-05-29 18:01:58,269 | INFO     | exitmsg: OK
[2025-05-29 14:02:12] 2025-05-29 18:01:58,269 | INFO     | cpuconsumptiontime: 63304 s
[2025-05-29 14:02:12] 2025-05-29 18:01:58,269 | INFO     | nevents: 400
[2025-05-29 14:02:12] 2025-05-29 18:01:58,270 | INFO     | neventsw: 0
[2025-05-29 14:02:12] 2025-05-29 18:01:58,270 | INFO     | pid: 2581570
[2025-05-29 14:02:12] 2025-05-29 18:01:58,270 | INFO     | pgrp: 2581570
[2025-05-29 14:02:12] 2025-05-29 18:01:58,270 | INFO     | corecount: 10
[2025-05-29 14:02:12] 2025-05-29 18:01:58,270 | INFO     | event service: False
[2025-05-29 14:02:12] 2025-05-29 18:01:58,270 | INFO     | sizes: {0: 2405007, 1: 2405063, 2: 2405091, 4: 2405318, 16: 2405318, 28: 2405346, 40: 2405502, 51: 2405530, 56: 2405764, 63: 2405792, 35688: 2445434, 35692: 245437
[2025-05-29 14:02:12] 2025-05-29 18:01:58,270 | INFO     | --------------------------------------------------
[2025-05-29 14:02:12] 2025-05-29 18:01:58,270 | INFO     | 
[2025-05-29 14:02:12] 2025-05-29 18:01:58,271 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-05-29 14:02:12] 2025-05-29 18:01:58,303 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-29 14:02:12] 2025-05-29 18:01:58,303 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-29 14:02:12] 2025-05-29 18:01:58,303 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-29 14:02:12] 2025-05-29 18:01:58,304 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-29 14:02:12] 2025-05-29 18:01:58,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-29 14:02:12] 2025-05-29 18:01:58,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-29 14:02:12] 2025-05-29 18:01:58,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-29 14:02:12] 2025-05-29 18:01:58,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-29 14:02:12] 2025-05-29 18:01:58,304 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-29 14:02:12] 2025-05-29 18:01:58,304 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-29 14:02:12] 2025-05-29 18:01:58,304 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-29 14:02:12] 2025-05-29 18:01:58,304 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-29 14:02:12] 2025-05-29 18:01:58,305 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-29 14:02:12] 2025-05-29 18:01:58,305 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-29 14:02:12] 2025-05-29 18:01:58,305 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-29 14:02:12] 2025-05-29 18:01:58,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-29 14:02:12] 2025-05-29 18:01:58,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-29 14:02:12] 2025-05-29 18:01:58,305 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-29 14:02:12] 2025-05-29 18:01:58,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-29 14:02:12] 2025-05-29 18:01:58,305 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-29 14:02:12] 2025-05-29 18:01:58,305 | INFO     | job 6669090031 has completed (purged errors)
[2025-05-29 14:02:12] 2025-05-29 18:01:58,306 | INFO     | overall cleanup function is called
[2025-05-29 14:02:12] 2025-05-29 18:01:59,315 | INFO     | --- collectZombieJob: --- 10, [2581570]
[2025-05-29 14:02:12] 2025-05-29 18:01:59,315 | INFO     | zombie collector waiting for pid 2581570
[2025-05-29 14:02:12] 2025-05-29 18:01:59,315 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-29 14:02:12] 2025-05-29 18:01:59,316 | INFO     | collected zombie processes
[2025-05-29 14:02:12] 2025-05-29 18:01:59,316 | INFO     | will attempt to kill all subprocesses of pid=2581570
[2025-05-29 14:02:12] 2025-05-29 18:01:59,691 | INFO     | process IDs to be killed: [2581570] (in reverse order)
[2025-05-29 14:02:12] 2025-05-29 18:01:59,790 | WARNING  | found no corresponding commands to process id(s)
[2025-05-29 14:02:12] 2025-05-29 18:01:59,791 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-29 14:02:12] 2025-05-29 18:01:59,833 | INFO     | did not find any defunct processes belonging to 2581570
[2025-05-29 14:02:12] 2025-05-29 18:01:59,845 | INFO     | did not find any defunct processes belonging to 2581570
[2025-05-29 14:02:12] 2025-05-29 18:01:59,846 | INFO     | ready for new job
[2025-05-29 14:02:12] 2025-05-29 18:01:59,846 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-29 14:02:12] 2025-05-29 18:01:59,848 | INFO     | **************************************
[2025-05-29 14:02:12] 2025-05-29 18:01:59,849 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-29 14:02:12] 2025-05-29 18:01:59,849 | INFO     | **************************************
[2025-05-29 14:02:12] 2025-05-29 18:01:59,849 | INFO     | 
[2025-05-29 14:02:12] 2025-05-29 18:01:59,864 | INFO     | architecture information:
[2025-05-29 14:02:12] 2025-05-29 18:01:59,867 | INFO     | executing command: cat /etc/os-release
[2025-05-29 14:02:12] 2025-05-29 18:01:59,890 | INFO     | cat /etc/os-release:
[2025-05-29 14:02:12] NAME="CentOS Linux"
[2025-05-29 14:02:12] VERSION="7 (Core)"
[2025-05-29 14:02:12] ID="centos"
[2025-05-29 14:02:12] ID_LIKE="rhel fedora"
[2025-05-29 14:02:12] VERSION_ID="7"
[2025-05-29 14:02:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-29 14:02:12] ANSI_COLOR="0;31"
[2025-05-29 14:02:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-29 14:02:12] HOME_URL="https://www.centos.org/"
[2025-05-29 14:02:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-29 14:02:12] 
[2025-05-29 14:02:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-29 14:02:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-29 14:02:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-29 14:02:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-29 14:02:12] 
[2025-05-29 14:02:12] 2025-05-29 18:01:59,890 | INFO     | **************************************
[2025-05-29 14:02:12] 2025-05-29 18:02:00,393 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-05-29 14:02:12] 2025-05-29 18:02:00,443 | INFO     | sufficient remaining disk space (75987156992 B)
[2025-05-29 14:02:12] 2025-05-29 18:02:00,443 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-29 14:02:12] 2025-05-29 18:02:00,444 | INFO     | current server update state: UPDATING_FINAL
[2025-05-29 14:02:12] 2025-05-29 18:02:00,444 | INFO     | update_server=False
[2025-05-29 14:02:12] 2025-05-29 18:02:00,444 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-29 14:02:12] 2025-05-29 18:02:00,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-29 14:02:12] 2025-05-29 18:02:00,557 | INFO     | all job control threads have been joined
[2025-05-29 14:02:12] 2025-05-29 18:02:00,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-29 14:02:12] 2025-05-29 18:02:00,677 | INFO     | aborting loop
[2025-05-29 14:02:12] 2025-05-29 18:02:00,718 | INFO     | found 0 job(s) in 20 queues
[2025-05-29 14:02:12] 2025-05-29 18:02:00,719 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-29 14:02:12] 2025-05-29 18:02:00,719 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-29 14:02:12] 2025-05-29 18:02:01,331 | INFO     | all payload control threads have been joined
[2025-05-29 14:02:12] 2025-05-29 18:02:01,332 | INFO     | all data control threads have been joined
[2025-05-29 14:02:12] 2025-05-29 18:02:01,451 | INFO     | [job] retrieve thread has finished
[2025-05-29 14:02:12] 2025-05-29 18:02:01,456 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-29 14:02:12] 2025-05-29 18:02:01,532 | INFO     | [job] validate thread has finished
[2025-05-29 14:02:12] 2025-05-29 18:02:01,563 | INFO     | [job] control thread has finished
[2025-05-29 14:02:12] 2025-05-29 18:02:01,683 | INFO     | [job] job monitor thread has finished
[2025-05-29 14:02:12] 2025-05-29 18:02:01,807 | INFO     | [job] create_data_payload thread has finished
[2025-05-29 14:02:12] 2025-05-29 18:02:01,818 | INFO     | [payload] failed_post thread has finished
[2025-05-29 14:02:12] 2025-05-29 18:02:01,856 | INFO     | [data] copytool_in thread has finished
[2025-05-29 14:02:12] 2025-05-29 18:02:01,995 | INFO     | [payload] validate_pre thread has finished
[2025-05-29 14:02:12] 2025-05-29 18:02:02,284 | INFO     | [payload] execute_payloads thread has finished
[2025-05-29 14:02:12] 2025-05-29 18:02:02,339 | INFO     | [payload] control thread has finished
[2025-05-29 14:02:12] 2025-05-29 18:02:02,348 | INFO     | [data] control thread has finished
[2025-05-29 14:02:12] 2025-05-29 18:02:02,452 | INFO     | [data] copytool_out thread has finished
[2025-05-29 14:02:12] 2025-05-29 18:02:02,646 | INFO     | [payload] validate_post thread has finished
[2025-05-29 14:02:12] 2025-05-29 18:02:02,703 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-29 14:02:12] 2025-05-29 18:02:03,285 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-29 14:02:12] 2025-05-29 18:02:04,291 | INFO     | [job] queue monitor thread has finished
[2025-05-29 14:02:12] 2025-05-29 18:02:05,464 | INFO     | [data] queue_monitor thread has finished
[2025-05-29 14:02:12] 2025-05-29 18:02:06,584 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140642673108800)>', '<ExcThread(monitor, started 140642176980736)>']
[2025-05-29 14:02:12] 2025-05-29 18:02:06,754 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-29 14:02:12] 2025-05-29 18:02:06,754 | INFO     | [monitor] control thread has ended
[2025-05-29 14:02:12] 2025-05-29 18:02:11,621 | INFO     | all workflow threads have been joined
[2025-05-29 14:02:12] 2025-05-29 18:02:11,621 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-29 14:02:12] 2025-05-29 18:02:11,622 | INFO     | traces error code: 0
[2025-05-29 14:02:12] 2025-05-29 18:02:11,622 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-29 14:02:12] 2025-05-29 18:02:12,076 [wrapper] ==== pilot stdout END ====
[2025-05-29 14:02:12] 2025-05-29 18:02:12,080 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-29 14:02:12] 2025-05-29 18:02:12,086 [wrapper] pilotpid: 2566470
[2025-05-29 14:02:12] 2025-05-29 18:02:12,091 [wrapper] Pilot exit status: 0
[2025-05-29 14:02:12] 2025-05-29 18:02:12,156 [wrapper] pandaids: 6669090031
[2025-05-29 14:02:12] 2025-05-29 18:02:12,259 [wrapper] cleanup supervisor_pilot 1413326 2566471
[2025-05-29 14:02:12] 2025-05-29 18:02:12,270 [wrapper] Test setup, not cleaning
[2025-05-29 14:02:12] 2025-05-29 18:02:12,275 [wrapper] apfmon messages muted
[2025-05-29 14:02:12] 2025-05-29 18:02:12,281 [wrapper] ==== wrapper stdout END ====
[2025-05-29 14:02:12] 2025-05-29 18:02:12,285 [wrapper] ==== wrapper stderr END ====
[2025-05-29 14:02:12]  *** Error codes and diagnostics ***
[2025-05-29 14:02:12]     "exeErrorCode": 0,
[2025-05-29 14:02:12]     "exeErrorDiag": "",
[2025-05-29 14:02:12]     "pilotErrorCode": 0,
[2025-05-29 14:02:12]     "pilotErrorDiag": "",
[2025-05-29 14:02:12]  *** Listing of results directory ***
[2025-05-29 14:02:12] total 417532
[2025-05-29 14:02:12] -rw-r--r--. 1 boincer umatlas    495897 May 28 21:22 pilot3.tar.gz
[2025-05-29 14:02:12] -rw-r--r--. 1 boincer umatlas      5111 May 28 21:28 queuedata.json
[2025-05-29 14:02:12] -rwx------. 1 boincer umatlas     37140 May 28 21:29 runpilot2-wrapper.sh
[2025-05-29 14:02:12] -rw-r--r--. 1 boincer umatlas       100 May 29 04:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-29 14:02:12] -rwxr-xr-x. 1 boincer umatlas      7986 May 29 04:03 run_atlas
[2025-05-29 14:02:12] -rw-r--r--. 1 boincer umatlas       105 May 29 04:03 job.xml
[2025-05-29 14:02:12] -rw-r--r--. 2 boincer umatlas 222177144 May 29 04:03 EVNT.44871834._003623.pool.root.1
[2025-05-29 14:02:12] -rw-r--r--. 2 boincer umatlas     15093 May 29 04:03 start_atlas.sh
[2025-05-29 14:02:12] drwxrwx--x. 2 boincer umatlas      4096 May 29 04:03 shared
[2025-05-29 14:02:12] -rw-r--r--. 2 boincer umatlas    508872 May 29 04:03 input.tar.gz
[2025-05-29 14:02:12] -rw-r--r--. 1 boincer umatlas         0 May 29 04:03 boinc_lockfile
[2025-05-29 14:02:12] -rw-r--r--. 1 boincer umatlas      2559 May 29 04:03 pandaJob.out
[2025-05-29 14:02:12] -rw-------. 1 boincer umatlas    993147 May 29 04:04 agis_schedconf.cvmfs.json
[2025-05-29 14:02:12] drwx------. 4 boincer umatlas      4096 May 29 04:04 pilot3
[2025-05-29 14:02:12] -rw-r--r--. 1 boincer umatlas      6657 May 29 14:00 init_data.xml
[2025-05-29 14:02:12] -rw-------. 1 boincer umatlas 195035770 May 29 14:00 HITS.44871837._093180.pool.root.1
[2025-05-29 14:02:12] -rw-r--r--. 1 boincer umatlas       531 May 29 14:00 boinc_task_state.xml
[2025-05-29 14:02:12] -rw-------. 1 boincer umatlas      1044 May 29 14:01 memory_monitor_summary.json
[2025-05-29 14:02:12] -rw-------. 1 boincer umatlas   1603667 May 29 14:01 agis_ddmendpoints.agis.ALL.json
[2025-05-29 14:02:12] -rw-------. 1 boincer umatlas    598325 May 29 14:01 log.44871837._093180.job.log.tgz.1
[2025-05-29 14:02:12] -rw-------. 1 boincer umatlas        95 May 29 14:01 pilot_heartbeat.json
[2025-05-29 14:02:12] -rw-------. 1 boincer umatlas      7716 May 29 14:01 heartbeat.json
[2025-05-29 14:02:12] -rw-r--r--. 1 boincer umatlas      8192 May 29 14:02 boinc_mmap_file
[2025-05-29 14:02:12] -rw-r--r--. 1 boincer umatlas        28 May 29 14:02 wrapper_checkpoint.txt
[2025-05-29 14:02:12] -rw-------. 1 boincer umatlas      4353 May 29 14:02 pilotlog.txt
[2025-05-29 14:02:12] -rw-------. 1 boincer umatlas   2648068 May 29 14:02 log.44871837._093180.job.log.1
[2025-05-29 14:02:12] -rw-------. 1 boincer umatlas       357 May 29 14:02 output.list
[2025-05-29 14:02:12] -rw-r--r--. 1 boincer umatlas       620 May 29 14:02 runtime_log
[2025-05-29 14:02:12] -rw-------. 1 boincer umatlas   3266560 May 29 14:02 result.tar.gz
[2025-05-29 14:02:12] -rw-r--r--. 1 boincer umatlas      8647 May 29 14:02 runtime_log.err
[2025-05-29 14:02:12] -rw-------. 1 boincer umatlas       655 May 29 14:02 GJjMDmvGhe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlWdKDmfWATqn.diag
[2025-05-29 14:02:12] -rw-r--r--. 1 boincer umatlas     20861 May 29 14:02 stderr.txt
[2025-05-29 14:02:12] HITS file was successfully produced:
[2025-05-29 14:02:12] -rw-------. 1 boincer umatlas 195035770 May 29 14:00 shared/HITS.pool.root.1
[2025-05-29 14:02:12]  *** Contents of shared directory: ***
[2025-05-29 14:02:12] total 411152
[2025-05-29 14:02:12] -rw-r--r--. 2 boincer umatlas 222177144 May 29 04:03 ATLAS.root_0
[2025-05-29 14:02:12] -rw-r--r--. 2 boincer umatlas     15093 May 29 04:03 start_atlas.sh
[2025-05-29 14:02:12] -rw-r--r--. 2 boincer umatlas    508872 May 29 04:03 input.tar.gz
[2025-05-29 14:02:12] -rw-------. 1 boincer umatlas 195035770 May 29 14:00 HITS.pool.root.1
[2025-05-29 14:02:12] -rw-------. 1 boincer umatlas   3266560 May 29 14:02 result.tar.gz
14:02:14 (2561788): run_atlas exited; CPU time 64471.450868
14:02:14 (2561788): called boinc_finish(0)

</stderr_txt>
]]>

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