Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:01:01 (541693): wrapper (7.7.26015): starting
02:01:01 (541693): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 02:01:01] Arguments: --nthreads 4
[2025-06-05 02:01:01] Threads: 4
[2025-06-05 02:01:01] Checking for CVMFS
[2025-06-05 02:01:01] No cvmfs_config command found, will try listing directly
[2025-06-05 02:01:01] CVMFS is ok
[2025-06-05 02:01:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 02:01:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 02:01:01] Further information can be found at the LHC@home message board.
[2025-06-05 02:01:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 02:01:01] Checking for apptainer binary...
[2025-06-05 02:01:01] which: no apptainer in ((null))
[2025-06-05 02:01:01] apptainer is not installed, using version from CVMFS
[2025-06-05 02:01:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:01:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-06-05 02:01:01] apptainer works
[2025-06-05 02:01:01] Set ATHENA_PROC_NUMBER=4
[2025-06-05 02:01:01] Set ATHENA_CORE_NUMBER=4
[2025-06-05 02:01:01] Starting ATLAS job with PandaID=6669089981
[2025-06-05 02:01:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:08:50]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:08:50] 2025-06-05 03:08:29,241 | INFO     | using path: /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-6669089981/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:08:50] 2025-06-05 03:08:29,242 | INFO     | extracted standard info from prmon json
[2025-06-05 05:08:50] 2025-06-05 03:08:29,242 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:08:50] 2025-06-05 03:08:29,242 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:08:50] 2025-06-05 03:08:29,242 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:08:50] 2025-06-05 03:08:29,243 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:08:50] 2025-06-05 03:08:29,247 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:08:50] 2025-06-05 03:08:29,247 | INFO     | sum of square deviations: 1931608310.0
[2025-06-05 05:08:50] 2025-06-05 03:08:29,248 | INFO     | sum of deviations: 21220203162.999996
[2025-06-05 05:08:50] 2025-06-05 03:08:29,248 | INFO     | mean x: 1749087289.5
[2025-06-05 05:08:50] 2025-06-05 03:08:29,249 | INFO     | mean y: 2286769.804347826
[2025-06-05 05:08:50] 2025-06-05 03:08:29,249 | INFO     | -- intersect: -19212782579.846043
[2025-06-05 05:08:50] 2025-06-05 03:08:29,249 | INFO     | intersect: -19212782579.846043
[2025-06-05 05:08:50] 2025-06-05 03:08:29,249 | INFO     | chi2: 2.4069061427077876
[2025-06-05 05:08:50] 2025-06-05 03:08:29,249 | INFO     | sum of square deviations: 1778377530.0
[2025-06-05 05:08:50] 2025-06-05 03:08:29,251 | INFO     | sum of deviations: 31933348903.0
[2025-06-05 05:08:50] 2025-06-05 03:08:29,251 | INFO     | mean x: 1749087137.0
[2025-06-05 05:08:50] 2025-06-05 03:08:29,251 | INFO     | mean y: 2297177.966480447
[2025-06-05 05:08:50] 2025-06-05 03:08:29,251 | INFO     | -- intersect: -31405100219.576187
[2025-06-05 05:08:50] 2025-06-05 03:08:29,251 | INFO     | intersect: -31405100219.576187
[2025-06-05 05:08:50] 2025-06-05 03:08:29,251 | INFO     | chi2: 1.6002007641454579
[2025-06-05 05:08:50] 2025-06-05 03:08:29,251 | INFO     | current chi2=1.6002007641454579 (change=33.51627902095011 %)
[2025-06-05 05:08:50] 2025-06-05 03:08:29,252 | INFO     | sum of square deviations: 1633472487.5
[2025-06-05 05:08:50] 2025-06-05 03:08:29,253 | INFO     | sum of deviations: 30857869127.0
[2025-06-05 05:08:50] 2025-06-05 03:08:29,253 | INFO     | mean x: 1749086984.5
[2025-06-05 05:08:50] 2025-06-05 03:08:29,253 | INFO     | mean y: 2296045.8505747127
[2025-06-05 05:08:50] 2025-06-05 03:08:29,253 | INFO     | -- intersect: -33039642323.154293
[2025-06-05 05:08:50] 2025-06-05 03:08:29,253 | INFO     | intersect: -33039642323.154293
[2025-06-05 05:08:50] 2025-06-05 03:08:29,253 | INFO     | chi2: 1.601131219259349
[2025-06-05 05:08:50] 2025-06-05 03:08:29,253 | INFO     | current chi2=1.601131219259349 (change=-0.058146148579550194 %)
[2025-06-05 05:08:50] 2025-06-05 03:08:29,253 | INFO     | right removable region: 173
[2025-06-05 05:08:50] 2025-06-05 03:08:29,254 | INFO     | sum of square deviations: 1778377530.0
[2025-06-05 05:08:50] 2025-06-05 03:08:29,255 | INFO     | sum of deviations: -7089587933.0
[2025-06-05 05:08:50] 2025-06-05 03:08:29,255 | INFO     | mean x: 1749087442.0
[2025-06-05 05:08:50] 2025-06-05 03:08:29,255 | INFO     | mean y: 2314623.027932961
[2025-06-05 05:08:50] 2025-06-05 03:08:29,255 | INFO     | -- intersect: 6975136205.2737665
[2025-06-05 05:08:50] 2025-06-05 03:08:29,255 | INFO     | intersect: 6975136205.2737665
[2025-06-05 05:08:50] 2025-06-05 03:08:29,256 | INFO     | chi2: 0.8400677348035577
[2025-06-05 05:08:50] 2025-06-05 03:08:29,256 | INFO     | current chi2=0.8400677348035577 (change=65.09761141502281 %)
[2025-06-05 05:08:50] 2025-06-05 03:08:29,256 | INFO     | sum of square deviations: 1633472487.5
[2025-06-05 05:08:50] 2025-06-05 03:08:29,257 | INFO     | sum of deviations: -8653865101.0
[2025-06-05 05:08:50] 2025-06-05 03:08:29,257 | INFO     | mean x: 1749087594.5
[2025-06-05 05:08:50] 2025-06-05 03:08:29,257 | INFO     | mean y: 2316242.4137931033
[2025-06-05 05:08:50] 2025-06-05 03:08:29,257 | INFO     | -- intersect: 9268690918.733887
[2025-06-05 05:08:50] 2025-06-05 03:08:29,257 | INFO     | intersect: 9268690918.733887
[2025-06-05 05:08:50] 2025-06-05 03:08:29,257 | INFO     | chi2: 0.8331126029840918
[2025-06-05 05:08:50] 2025-06-05 03:08:29,258 | INFO     | current chi2=0.8331126029840918 (change=0.8279251221441359 %)
[2025-06-05 05:08:50] 2025-06-05 03:08:29,258 | INFO     | left removable region: 20
[2025-06-05 05:08:50] 2025-06-05 03:08:29,258 | INFO     | sum of square deviations: 1110539892.0
[2025-06-05 05:08:50] 2025-06-05 03:08:29,259 | INFO     | sum of deviations: 2245888118.0
[2025-06-05 05:08:50] 2025-06-05 03:08:29,259 | INFO     | mean x: 1749087564.0
[2025-06-05 05:08:50] 2025-06-05 03:08:29,259 | INFO     | mean y: 2327551.9281045753
[2025-06-05 05:08:50] 2025-06-05 03:08:29,259 | INFO     | -- intersect: -3534920416.9446473
[2025-06-05 05:08:50] 2025-06-05 03:08:29,259 | INFO     | intersect: -3534920416.9446473
[2025-06-05 05:08:50] 2025-06-05 03:08:29,259 | INFO     | chi2: 0.0001505122124231476
[2025-06-05 05:08:50] 2025-06-05 03:08:29,259 | INFO     | -- intersect: -3534920416.9446473
[2025-06-05 05:08:50] 2025-06-05 03:08:29,260 | INFO     | current memory leak: 2.02 B/s (using 153 data points, chi2=0.00)
[2025-06-05 05:08:50] 2025-06-05 03:08:29,260 | INFO     | ..............................
[2025-06-05 05:08:50] 2025-06-05 03:08:29,260 | INFO     | . Timing measurements:
[2025-06-05 05:08:50] 2025-06-05 03:08:29,260 | INFO     | . get job = 0 s
[2025-06-05 05:08:50] 2025-06-05 03:08:29,260 | INFO     | . initial setup = 1 s
[2025-06-05 05:08:50] 2025-06-05 03:08:29,260 | INFO     | . payload setup = 9 s
[2025-06-05 05:08:50] 2025-06-05 03:08:29,260 | INFO     | . stage-in = 0 s
[2025-06-05 05:08:50] 2025-06-05 03:08:29,260 | INFO     | . payload execution = 11193 s
[2025-06-05 05:08:50] 2025-06-05 03:08:29,261 | INFO     | . stage-out = 1 s
[2025-06-05 05:08:50] 2025-06-05 03:08:29,261 | INFO     | . log creation = 0 s
[2025-06-05 05:08:50] 2025-06-05 03:08:29,261 | INFO     | ..............................
[2025-06-05 05:08:50] 2025-06-05 03:08:29,361 | INFO     | 
[2025-06-05 05:08:50] 2025-06-05 03:08:29,361 | INFO     | job summary report
[2025-06-05 05:08:50] 2025-06-05 03:08:29,361 | INFO     | --------------------------------------------------
[2025-06-05 05:08:50] 2025-06-05 03:08:29,361 | INFO     | PanDA job id: 6669089981
[2025-06-05 05:08:50] 2025-06-05 03:08:29,361 | INFO     | task id: 44871837
[2025-06-05 05:08:50] 2025-06-05 03:08:29,361 | INFO     | errors: (none)
[2025-06-05 05:08:50] 2025-06-05 03:08:29,361 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:08:50] 2025-06-05 03:08:29,361 | INFO     | pilot state: finished 
[2025-06-05 05:08:50] 2025-06-05 03:08:29,361 | INFO     | transexitcode: 0
[2025-06-05 05:08:50] 2025-06-05 03:08:29,362 | INFO     | exeerrorcode: 0
[2025-06-05 05:08:50] 2025-06-05 03:08:29,362 | INFO     | exeerrordiag: 
[2025-06-05 05:08:50] 2025-06-05 03:08:29,362 | INFO     | exitcode: 0
[2025-06-05 05:08:50] 2025-06-05 03:08:29,362 | INFO     | exitmsg: OK
[2025-06-05 05:08:50] 2025-06-05 03:08:29,362 | INFO     | cpuconsumptiontime: 42649 s
[2025-06-05 05:08:50] 2025-06-05 03:08:29,362 | INFO     | nevents: 400
[2025-06-05 05:08:50] 2025-06-05 03:08:29,362 | INFO     | neventsw: 0
[2025-06-05 05:08:50] 2025-06-05 03:08:29,362 | INFO     | pid: 561810
[2025-06-05 05:08:50] 2025-06-05 03:08:29,362 | INFO     | pgrp: 561810
[2025-06-05 05:08:50] 2025-06-05 03:08:29,362 | INFO     | corecount: 4
[2025-06-05 05:08:50] 2025-06-05 03:08:29,362 | INFO     | event service: False
[2025-06-05 05:08:50] 2025-06-05 03:08:29,363 | INFO     | sizes: {0: 2397232, 1: 2397431, 7: 2397637, 11: 2397665, 11206: 2427214, 11208: 2436177, 11210: 2436361, 11218: 2436531}
[2025-06-05 05:08:50] 2025-06-05 03:08:29,363 | INFO     | --------------------------------------------------
[2025-06-05 05:08:50] 2025-06-05 03:08:29,363 | INFO     | 
[2025-06-05 05:08:50] 2025-06-05 03:08:29,363 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2025-06-05 05:08:50] 2025-06-05 03:08:29,393 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:08:50] 2025-06-05 03:08:29,394 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:08:50] 2025-06-05 03:08:29,395 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:08:50] 2025-06-05 03:08:29,395 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:08:50] 2025-06-05 03:08:29,395 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:08:50] 2025-06-05 03:08:29,395 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:08:50] 2025-06-05 03:08:29,395 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:08:50] 2025-06-05 03:08:29,395 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:08:50] 2025-06-05 03:08:29,395 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:08:50] 2025-06-05 03:08:29,395 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:08:50] 2025-06-05 03:08:29,395 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:08:50] 2025-06-05 03:08:29,395 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:08:50] 2025-06-05 03:08:29,395 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:08:50] 2025-06-05 03:08:29,395 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:08:50] 2025-06-05 03:08:29,396 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:08:50] 2025-06-05 03:08:29,396 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:08:50] 2025-06-05 03:08:29,396 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:08:50] 2025-06-05 03:08:29,396 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:08:50] 2025-06-05 03:08:29,396 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:08:50] 2025-06-05 03:08:29,396 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:08:50] 2025-06-05 03:08:29,396 | INFO     | job 6669089981 has completed (purged errors)
[2025-06-05 05:08:50] 2025-06-05 03:08:29,396 | INFO     | overall cleanup function is called
[2025-06-05 05:08:50] 2025-06-05 03:08:30,404 | INFO     | --- collectZombieJob: --- 10, [561810]
[2025-06-05 05:08:50] 2025-06-05 03:08:30,404 | INFO     | zombie collector waiting for pid 561810
[2025-06-05 05:08:50] 2025-06-05 03:08:30,405 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:08:50] 2025-06-05 03:08:30,405 | INFO     | collected zombie processes
[2025-06-05 05:08:50] 2025-06-05 03:08:30,405 | INFO     | will attempt to kill all subprocesses of pid=561810
[2025-06-05 05:08:50] 2025-06-05 03:08:31,069 | INFO     | process IDs to be killed: [561810] (in reverse order)
[2025-06-05 05:08:50] 2025-06-05 03:08:31,325 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:08:50] 2025-06-05 03:08:31,326 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:08:50] 2025-06-05 03:08:31,356 | INFO     | did not find any defunct processes belonging to 561810
[2025-06-05 05:08:50] 2025-06-05 03:08:31,386 | INFO     | did not find any defunct processes belonging to 561810
[2025-06-05 05:08:50] 2025-06-05 03:08:31,386 | INFO     | ready for new job
[2025-06-05 05:08:50] 2025-06-05 03:08:31,386 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:08:50] 2025-06-05 03:08:31,389 | INFO     | **************************************
[2025-06-05 05:08:50] 2025-06-05 03:08:31,389 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:08:50] 2025-06-05 03:08:31,389 | INFO     | **************************************
[2025-06-05 05:08:50] 2025-06-05 03:08:31,389 | INFO     | 
[2025-06-05 05:08:50] 2025-06-05 03:08:31,397 | INFO     | architecture information:
[2025-06-05 05:08:50] 2025-06-05 03:08:31,398 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:08:50] 2025-06-05 03:08:31,424 | INFO     | cat /etc/os-release:
[2025-06-05 05:08:50] NAME="CentOS Linux"
[2025-06-05 05:08:50] VERSION="7 (Core)"
[2025-06-05 05:08:50] ID="centos"
[2025-06-05 05:08:50] ID_LIKE="rhel fedora"
[2025-06-05 05:08:50] VERSION_ID="7"
[2025-06-05 05:08:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:08:50] ANSI_COLOR="0;31"
[2025-06-05 05:08:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:08:50] HOME_URL="https://www.centos.org/"
[2025-06-05 05:08:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:08:50] 
[2025-06-05 05:08:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:08:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:08:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:08:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:08:50] 
[2025-06-05 05:08:50] 2025-06-05 03:08:31,425 | INFO     | **************************************
[2025-06-05 05:08:50] 2025-06-05 03:08:31,927 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2025-06-05 05:08:50] 2025-06-05 03:08:31,955 | INFO     | sufficient remaining disk space (3285121499136 B)
[2025-06-05 05:08:50] 2025-06-05 03:08:31,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:08:50] 2025-06-05 03:08:31,956 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:08:50] 2025-06-05 03:08:31,956 | INFO     | update_server=False
[2025-06-05 05:08:50] 2025-06-05 03:08:31,956 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:08:50] 2025-06-05 03:08:31,956 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:08:50] 2025-06-05 03:08:31,957 | INFO     | aborting loop
[2025-06-05 05:08:50] 2025-06-05 03:08:32,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:08:50] 2025-06-05 03:08:32,574 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:08:50] 2025-06-05 03:08:32,575 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:08:50] 2025-06-05 03:08:32,575 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:08:50] 2025-06-05 03:08:32,597 | INFO     | all payload control threads have been joined
[2025-06-05 05:08:50] 2025-06-05 03:08:32,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:08:50] 2025-06-05 03:08:32,796 | INFO     | all data control threads have been joined
[2025-06-05 05:08:50] 2025-06-05 03:08:32,962 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:08:50] 2025-06-05 03:08:32,963 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:08:50] 2025-06-05 03:08:33,069 | INFO     | all job control threads have been joined
[2025-06-05 05:08:50] 2025-06-05 03:08:33,257 | INFO     | [job] validate thread has finished
[2025-06-05 05:08:50] 2025-06-05 03:08:33,361 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:08:50] 2025-06-05 03:08:33,428 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:08:50] 2025-06-05 03:08:33,602 | INFO     | [payload] control thread has finished
[2025-06-05 05:08:50] 2025-06-05 03:08:33,651 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:08:50] 2025-06-05 03:08:33,652 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:08:50] 2025-06-05 03:08:33,800 | INFO     | [data] control thread has finished
[2025-06-05 05:08:50] 2025-06-05 03:08:33,857 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:08:50] 2025-06-05 03:08:34,075 | INFO     | [job] control thread has finished
[2025-06-05 05:08:50] 2025-06-05 03:08:34,371 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:08:50] 2025-06-05 03:08:34,425 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:08:50] 2025-06-05 03:08:34,777 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:08:50] 2025-06-05 03:08:35,376 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:08:50] 2025-06-05 03:08:36,088 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:08:50] 2025-06-05 03:08:42,757 | INFO     | job.realtimelogging is not enabled
[2025-06-05 05:08:50] 2025-06-05 03:08:43,762 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:08:50] 2025-06-05 03:08:44,661 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23186382124864)>', '<ExcThread(monitor, started 23186143938304)>']
[2025-06-05 05:08:50] 2025-06-05 03:08:45,640 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:08:50] 2025-06-05 03:08:45,643 | INFO     | [monitor] control thread has ended
[2025-06-05 05:08:50] 2025-06-05 03:08:49,686 | INFO     | all workflow threads have been joined
[2025-06-05 05:08:50] 2025-06-05 03:08:49,686 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:08:50] 2025-06-05 03:08:49,687 | INFO     | traces error code: 0
[2025-06-05 05:08:50] 2025-06-05 03:08:49,687 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:08:50] 2025-06-05 03:08:49,821 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:08:50] 2025-06-05 03:08:49,825 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:08:50] 2025-06-05 03:08:49,829 [wrapper] pilotpid: 546073
[2025-06-05 05:08:50] 2025-06-05 03:08:49,832 [wrapper] Pilot exit status: 0
[2025-06-05 05:08:50] 2025-06-05 03:08:49,846 [wrapper] pandaids: 6669089981
[2025-06-05 05:08:50] 2025-06-05 03:08:49,991 [wrapper] cleanup supervisor_pilot 1157924 546074
[2025-06-05 05:08:50] 2025-06-05 03:08:49,995 [wrapper] Test setup, not cleaning
[2025-06-05 05:08:50] 2025-06-05 03:08:49,998 [wrapper] apfmon messages muted
[2025-06-05 05:08:50] 2025-06-05 03:08:50,002 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:08:50] 2025-06-05 03:08:50,005 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:08:50]  *** Error codes and diagnostics ***
[2025-06-05 05:08:50]     "exeErrorCode": 0,
[2025-06-05 05:08:50]     "exeErrorDiag": "",
[2025-06-05 05:08:50]     "pilotErrorCode": 0,
[2025-06-05 05:08:50]     "pilotErrorDiag": "",
[2025-06-05 05:08:50]  *** Listing of results directory ***
[2025-06-05 05:08:50] total 416716
[2025-06-05 05:08:50] -rw-r--r-- 1 boinc boinc    495897 May 29 03:22 pilot3.tar.gz
[2025-06-05 05:08:50] -rw-r--r-- 1 boinc boinc      5111 May 29 03:28 queuedata.json
[2025-06-05 05:08:50] -rwx------ 1 boinc boinc     37140 May 29 03:29 runpilot2-wrapper.sh
[2025-06-05 05:08:50] -rw-r--r-- 1 boinc boinc       100 Jun  5 02:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:08:50] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 02:00 run_atlas
[2025-06-05 05:08:50] -rw-r--r-- 1 boinc boinc       105 Jun  5 02:00 job.xml
[2025-06-05 05:08:50] -rw-r--r-- 1 boinc boinc      6685 Jun  5 02:01 init_data.xml
[2025-06-05 05:08:50] -rw-r--r-- 2 boinc boinc 224727329 Jun  5 02:01 EVNT.44871834._003621.pool.root.1
[2025-06-05 05:08:50] drwxrwx--x 2 boinc boinc      4096 Jun  5 02:01 shared
[2025-06-05 05:08:50] -rw-r--r-- 2 boinc boinc    508875 Jun  5 02:01 input.tar.gz
[2025-06-05 05:08:50] -rw-r--r-- 2 boinc boinc     15093 Jun  5 02:01 start_atlas.sh
[2025-06-05 05:08:50] -rw-r--r-- 1 boinc boinc         0 Jun  5 02:01 boinc_lockfile
[2025-06-05 05:08:50] -rw-r--r-- 1 boinc boinc      2559 Jun  5 02:01 pandaJob.out
[2025-06-05 05:08:50] -rw------- 1 boinc boinc    987117 Jun  5 02:01 agis_schedconf.cvmfs.json
[2025-06-05 05:08:50] drwx------ 4 boinc boinc      4096 Jun  5 02:01 pilot3
[2025-06-05 05:08:50] -rw------- 1 boinc boinc        95 Jun  5 05:07 pilot_heartbeat.json
[2025-06-05 05:08:50] -rw------- 1 boinc boinc 195447767 Jun  5 05:07 HITS.44871837._093130.pool.root.1
[2025-06-05 05:08:50] -rw-r--r-- 1 boinc boinc       529 Jun  5 05:07 boinc_task_state.xml
[2025-06-05 05:08:50] -rw------- 1 boinc boinc      1043 Jun  5 05:08 memory_monitor_summary.json
[2025-06-05 05:08:50] -rw------- 1 boinc boinc   1598969 Jun  5 05:08 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:08:50] -rw------- 1 boinc boinc    307020 Jun  5 05:08 log.44871837._093130.job.log.tgz.1
[2025-06-05 05:08:50] -rw------- 1 boinc boinc      7704 Jun  5 05:08 heartbeat.json
[2025-06-05 05:08:50] -rw-r--r-- 1 boinc boinc      8192 Jun  5 05:08 boinc_mmap_file
[2025-06-05 05:08:50] -rw-r--r-- 1 boinc boinc        27 Jun  5 05:08 wrapper_checkpoint.txt
[2025-06-05 05:08:50] -rw------- 1 boinc boinc      4436 Jun  5 05:08 pilotlog.txt
[2025-06-05 05:08:50] -rw------- 1 boinc boinc   1048720 Jun  5 05:08 log.44871837._093130.job.log.1
[2025-06-05 05:08:50] -rw------- 1 boinc boinc       357 Jun  5 05:08 output.list
[2025-06-05 05:08:50] -rw-r--r-- 1 boinc boinc       620 Jun  5 05:08 runtime_log
[2025-06-05 05:08:50] -rw------- 1 boinc boinc   1372160 Jun  5 05:08 result.tar.gz
[2025-06-05 05:08:50] -rw-r--r-- 1 boinc boinc      9026 Jun  5 05:08 runtime_log.err
[2025-06-05 05:08:50] -rw------- 1 boinc boinc       665 Jun  5 05:08 gceLDmzFhe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmTOUKDm5MEjrm.diag
[2025-06-05 05:08:50] -rw-r--r-- 1 boinc boinc     20591 Jun  5 05:08 stderr.txt
[2025-06-05 05:08:50] HITS file was successfully produced:
[2025-06-05 05:08:50] -rw------- 1 boinc boinc 195447767 Jun  5 05:07 shared/HITS.pool.root.1
[2025-06-05 05:08:50]  *** Contents of shared directory: ***
[2025-06-05 05:08:50] total 412196
[2025-06-05 05:08:50] -rw-r--r-- 2 boinc boinc 224727329 Jun  5 02:01 ATLAS.root_0
[2025-06-05 05:08:50] -rw-r--r-- 2 boinc boinc    508875 Jun  5 02:01 input.tar.gz
[2025-06-05 05:08:50] -rw-r--r-- 2 boinc boinc     15093 Jun  5 02:01 start_atlas.sh
[2025-06-05 05:08:50] -rw------- 1 boinc boinc 195447767 Jun  5 05:07 HITS.pool.root.1
[2025-06-05 05:08:50] -rw------- 1 boinc boinc   1372160 Jun  5 05:08 result.tar.gz
05:08:51 (541693): run_atlas exited; CPU time 43304.290032
05:08:51 (541693): called boinc_finish(0)

</stderr_txt>
]]>

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