Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:28:58 (2599531): wrapper (7.7.26015): starting
21:28:58 (2599531): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 21:28:58] Arguments: --nthreads 4
[2025-06-03 21:28:58] Threads: 4
[2025-06-03 21:28:58] Checking for CVMFS
[2025-06-03 21:28:58] No cvmfs_config command found, will try listing directly
[2025-06-03 21:28:58] CVMFS is ok
[2025-06-03 21:28:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 21:28:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 21:28:58] Further information can be found at the LHC@home message board.
[2025-06-03 21:28:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:28:58] Checking for apptainer binary...
[2025-06-03 21:28:58] which: no apptainer in ((null))
[2025-06-03 21:28:58] apptainer is not installed, using version from CVMFS
[2025-06-03 21:28:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:28:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-06-03 21:28:58] apptainer works
[2025-06-03 21:28:58] Set ATHENA_PROC_NUMBER=4
[2025-06-03 21:28:58] Set ATHENA_CORE_NUMBER=4
[2025-06-03 21:28:58] Starting ATLAS job with PandaID=6668946934
[2025-06-03 21:28:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:26:56]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:26:56] 2025-06-03 23:25:39,611 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 01:26:56] 2025-06-03 23:25:41,927 | INFO     | monitor loop #1026: job 0:6668946934 is in state 'finished'
[2025-06-04 01:26:56] 2025-06-03 23:25:41,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:26:56] 2025-06-03 23:25:44,430 | INFO     | monitor loop #1027: job 0:6668946934 is in state 'finished'
[2025-06-04 01:26:56] 2025-06-03 23:25:44,430 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:26:56] 2025-06-03 23:25:44,814 | INFO     | 14196s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 01:26:56] 2025-06-03 23:25:46,394 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 01:26:56] 2025-06-03 23:25:46,395 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6668946934/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:26:56] 2025-06-03 23:25:46,396 | INFO     | extracted standard info from prmon json
[2025-06-04 01:26:56] 2025-06-03 23:25:46,396 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:26:56] 2025-06-03 23:25:46,396 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:26:56] 2025-06-03 23:25:46,397 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:26:56] 2025-06-03 23:25:46,397 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:26:56] 2025-06-03 23:25:46,402 | INFO     | fitting pss+swap vs Time
[2025-06-04 01:26:56] 2025-06-03 23:25:46,403 | INFO     | sum of square deviations: 3871990738.0
[2025-06-04 01:26:56] 2025-06-03 23:25:46,405 | INFO     | sum of deviations: 4370767211.499998
[2025-06-04 01:26:56] 2025-06-03 23:25:46,405 | INFO     | mean x: 1748986026.5
[2025-06-04 01:26:56] 2025-06-03 23:25:46,405 | INFO     | mean y: 2339423.3146551726
[2025-06-04 01:26:56] 2025-06-03 23:25:46,405 | INFO     | -- intersect: -1971944942.3412492
[2025-06-04 01:26:56] 2025-06-03 23:25:46,405 | INFO     | intersect: -1971944942.3412492
[2025-06-04 01:26:56] 2025-06-03 23:25:46,406 | INFO     | chi2: 1.7106087775654597
[2025-06-04 01:26:56] 2025-06-03 23:25:46,406 | INFO     | sum of square deviations: 3627000098.0
[2025-06-04 01:26:56] 2025-06-03 23:25:46,408 | INFO     | sum of deviations: 4076432420.9999924
[2025-06-04 01:26:56] 2025-06-03 23:25:46,408 | INFO     | mean x: 1748985874.0
[2025-06-04 01:26:56] 2025-06-03 23:25:46,408 | INFO     | mean y: 2339240.013215859
[2025-06-04 01:26:56] 2025-06-03 23:25:46,408 | INFO     | -- intersect: -1963368653.0127656
[2025-06-04 01:26:56] 2025-06-03 23:25:46,408 | INFO     | intersect: -1963368653.0127656
[2025-06-04 01:26:56] 2025-06-03 23:25:46,409 | INFO     | chi2: 1.710576534060974
[2025-06-04 01:26:56] 2025-06-03 23:25:46,409 | INFO     | current chi2=1.710576534060974 (change=0.0018849140088949693 %)
[2025-06-04 01:26:56] 2025-06-03 23:25:46,409 | INFO     | right removable region: 226
[2025-06-04 01:26:56] 2025-06-03 23:25:46,409 | INFO     | sum of square deviations: 3627000098.0
[2025-06-04 01:26:56] 2025-06-03 23:25:46,411 | INFO     | sum of deviations: -26894441340.999996
[2025-06-04 01:26:56] 2025-06-03 23:25:46,411 | INFO     | mean x: 1748986179.0
[2025-06-04 01:26:56] 2025-06-03 23:25:46,411 | INFO     | mean y: 2358665.6431718064
[2025-06-04 01:26:56] 2025-06-03 23:25:46,411 | INFO     | -- intersect: 12971204799.193846
[2025-06-04 01:26:56] 2025-06-03 23:25:46,412 | INFO     | intersect: 12971204799.193846
[2025-06-04 01:26:56] 2025-06-03 23:25:46,412 | INFO     | chi2: 0.2640559647102429
[2025-06-04 01:26:56] 2025-06-03 23:25:46,412 | INFO     | current chi2=0.2640559647102429 (change=84.56362622632817 %)
[2025-06-04 01:26:56] 2025-06-03 23:25:46,413 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 01:26:56] 2025-06-03 23:25:46,414 | INFO     | sum of deviations: -18300542900.000004
[2025-06-04 01:26:56] 2025-06-03 23:25:46,414 | INFO     | mean x: 1748986331.5
[2025-06-04 01:26:56] 2025-06-03 23:25:46,414 | INFO     | mean y: 2353057.2882882883
[2025-06-04 01:26:56] 2025-06-03 23:25:46,415 | INFO     | -- intersect: 9436917469.99801
[2025-06-04 01:26:56] 2025-06-03 23:25:46,415 | INFO     | intersect: 9436917469.99801
[2025-06-04 01:26:56] 2025-06-03 23:25:46,415 | INFO     | chi2: 0.22527157169183812
[2025-06-04 01:26:56] 2025-06-03 23:25:46,415 | INFO     | current chi2=0.22527157169183812 (change=14.687944300354713 %)
[2025-06-04 01:26:56] 2025-06-03 23:25:46,415 | INFO     | left removable region: 20
[2025-06-04 01:26:56] 2025-06-03 23:25:46,416 | INFO     | sum of square deviations: 2710627567.5
[2025-06-04 01:26:56] 2025-06-03 23:25:46,417 | INFO     | sum of deviations: 5659297997.0
[2025-06-04 01:26:56] 2025-06-03 23:25:46,417 | INFO     | mean x: 1748986453.5
[2025-06-04 01:26:56] 2025-06-03 23:25:46,417 | INFO     | mean y: 2335689.8932038834
[2025-06-04 01:26:56] 2025-06-03 23:25:46,418 | INFO     | -- intersect: -3649230335.5352173
[2025-06-04 01:26:56] 2025-06-03 23:25:46,418 | INFO     | intersect: -3649230335.5352173
[2025-06-04 01:26:56] 2025-06-03 23:25:46,418 | INFO     | chi2: 0.0002580956659566231
[2025-06-04 01:26:56] 2025-06-03 23:25:46,418 | INFO     | -- intersect: -3649230335.5352173
[2025-06-04 01:26:56] 2025-06-03 23:25:46,418 | INFO     | current memory leak: 2.09 B/s (using 206 data points, chi2=0.00)
[2025-06-04 01:26:56] 2025-06-03 23:25:46,419 | INFO     | ..............................
[2025-06-04 01:26:56] 2025-06-03 23:25:46,419 | INFO     | . Timing measurements:
[2025-06-04 01:26:56] 2025-06-03 23:25:46,419 | INFO     | . get job = 0 s
[2025-06-04 01:26:56] 2025-06-03 23:25:46,419 | INFO     | . initial setup = 1 s
[2025-06-04 01:26:56] 2025-06-03 23:25:46,420 | INFO     | . payload setup = 8 s
[2025-06-04 01:26:56] 2025-06-03 23:25:46,420 | INFO     | . stage-in = 0 s
[2025-06-04 01:26:56] 2025-06-03 23:25:46,420 | INFO     | . payload execution = 14154 s
[2025-06-04 01:26:56] 2025-06-03 23:25:46,420 | INFO     | . stage-out = 1 s
[2025-06-04 01:26:56] 2025-06-03 23:25:46,421 | INFO     | . log creation = 0 s
[2025-06-04 01:26:56] 2025-06-03 23:25:46,421 | INFO     | ..............................
[2025-06-04 01:26:56] 2025-06-03 23:25:46,533 | INFO     | 
[2025-06-04 01:26:56] 2025-06-03 23:25:46,534 | INFO     | job summary report
[2025-06-04 01:26:56] 2025-06-03 23:25:46,534 | INFO     | --------------------------------------------------
[2025-06-04 01:26:56] 2025-06-03 23:25:46,534 | INFO     | PanDA job id: 6668946934
[2025-06-04 01:26:56] 2025-06-03 23:25:46,534 | INFO     | task id: 44871837
[2025-06-04 01:26:56] 2025-06-03 23:25:46,534 | INFO     | errors: (none)
[2025-06-04 01:26:56] 2025-06-03 23:25:46,534 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:26:56] 2025-06-03 23:25:46,534 | INFO     | pilot state: finished 
[2025-06-04 01:26:56] 2025-06-03 23:25:46,534 | INFO     | transexitcode: 0
[2025-06-04 01:26:56] 2025-06-03 23:25:46,534 | INFO     | exeerrorcode: 0
[2025-06-04 01:26:56] 2025-06-03 23:25:46,534 | INFO     | exeerrordiag: 
[2025-06-04 01:26:56] 2025-06-03 23:25:46,535 | INFO     | exitcode: 0
[2025-06-04 01:26:56] 2025-06-03 23:25:46,535 | INFO     | exitmsg: OK
[2025-06-04 01:26:56] 2025-06-03 23:25:46,535 | INFO     | cpuconsumptiontime: 54479 s
[2025-06-04 01:26:56] 2025-06-03 23:25:46,535 | INFO     | nevents: 400
[2025-06-04 01:26:56] 2025-06-03 23:25:46,535 | INFO     | neventsw: 0
[2025-06-04 01:26:56] 2025-06-03 23:25:46,535 | INFO     | pid: 2610312
[2025-06-04 01:26:56] 2025-06-03 23:25:46,535 | INFO     | pgrp: 2610312
[2025-06-04 01:26:56] 2025-06-03 23:25:46,535 | INFO     | corecount: 4
[2025-06-04 01:26:56] 2025-06-03 23:25:46,535 | INFO     | event service: False
[2025-06-04 01:26:56] 2025-06-03 23:25:46,535 | INFO     | sizes: {0: 2405018, 1: 2405273, 6: 2405479, 12: 2405507, 14166: 2435556, 14168: 2444519, 14170: 2444703, 14180: 2444873}
[2025-06-04 01:26:56] 2025-06-03 23:25:46,535 | INFO     | --------------------------------------------------
[2025-06-04 01:26:56] 2025-06-03 23:25:46,535 | INFO     | 
[2025-06-04 01:26:56] 2025-06-03 23:25:46,536 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-04 01:26:56] 2025-06-03 23:25:46,556 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:26:56] 2025-06-03 23:25:46,557 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:26:56] 2025-06-03 23:25:46,557 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:26:56] 2025-06-03 23:25:46,557 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:26:56] 2025-06-03 23:25:46,557 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:26:56] 2025-06-03 23:25:46,557 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:26:56] 2025-06-03 23:25:46,557 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:26:56] 2025-06-03 23:25:46,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:26:56] 2025-06-03 23:25:46,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:26:56] 2025-06-03 23:25:46,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:26:56] 2025-06-03 23:25:46,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:26:56] 2025-06-03 23:25:46,558 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:26:56] 2025-06-03 23:25:46,558 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:26:56] 2025-06-03 23:25:46,558 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:26:56] 2025-06-03 23:25:46,558 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:26:56] 2025-06-03 23:25:46,558 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:26:56] 2025-06-03 23:25:46,558 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:26:56] 2025-06-03 23:25:46,558 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:26:56] 2025-06-03 23:25:46,558 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:26:56] 2025-06-03 23:25:46,558 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:26:56] 2025-06-03 23:25:46,559 | INFO     | job 6668946934 has completed (purged errors)
[2025-06-04 01:26:56] 2025-06-03 23:25:46,559 | INFO     | overall cleanup function is called
[2025-06-04 01:26:56] 2025-06-03 23:25:47,567 | INFO     | --- collectZombieJob: --- 10, [2610312]
[2025-06-04 01:26:56] 2025-06-03 23:25:47,567 | INFO     | zombie collector waiting for pid 2610312
[2025-06-04 01:26:56] 2025-06-03 23:25:47,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:26:56] 2025-06-03 23:25:47,568 | INFO     | collected zombie processes
[2025-06-04 01:26:56] 2025-06-03 23:25:47,568 | INFO     | will attempt to kill all subprocesses of pid=2610312
[2025-06-04 01:26:56] 2025-06-03 23:25:47,932 | INFO     | process IDs to be killed: [2610312] (in reverse order)
[2025-06-04 01:26:56] 2025-06-03 23:25:48,048 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:26:56] 2025-06-03 23:25:48,048 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:26:56] 2025-06-03 23:25:48,061 | INFO     | did not find any defunct processes belonging to 2610312
[2025-06-04 01:26:56] 2025-06-03 23:25:48,073 | INFO     | did not find any defunct processes belonging to 2610312
[2025-06-04 01:26:56] 2025-06-03 23:25:48,074 | INFO     | ready for new job
[2025-06-04 01:26:56] 2025-06-03 23:25:48,074 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:26:56] 2025-06-03 23:25:48,076 | INFO     | **************************************
[2025-06-04 01:26:56] 2025-06-03 23:25:48,077 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:26:56] 2025-06-03 23:25:48,077 | INFO     | **************************************
[2025-06-04 01:26:56] 2025-06-03 23:25:48,077 | INFO     | 
[2025-06-04 01:26:56] 2025-06-03 23:25:48,081 | INFO     | architecture information:
[2025-06-04 01:26:56] 2025-06-03 23:25:48,081 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:26:56] 2025-06-03 23:25:48,097 | INFO     | cat /etc/os-release:
[2025-06-04 01:26:56] NAME="CentOS Linux"
[2025-06-04 01:26:56] VERSION="7 (Core)"
[2025-06-04 01:26:56] ID="centos"
[2025-06-04 01:26:56] ID_LIKE="rhel fedora"
[2025-06-04 01:26:56] VERSION_ID="7"
[2025-06-04 01:26:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:26:56] ANSI_COLOR="0;31"
[2025-06-04 01:26:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:26:56] HOME_URL="https://www.centos.org/"
[2025-06-04 01:26:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:26:56] 
[2025-06-04 01:26:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:26:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:26:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:26:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:26:56] 
[2025-06-04 01:26:56] 2025-06-03 23:25:48,097 | INFO     | **************************************
[2025-06-04 01:26:56] 2025-06-03 23:25:48,599 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-04 01:26:56] 2025-06-03 23:25:48,616 | INFO     | sufficient remaining disk space (640805765120 B)
[2025-06-04 01:26:56] 2025-06-03 23:25:48,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:26:56] 2025-06-03 23:25:48,616 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:26:56] 2025-06-03 23:25:48,616 | INFO     | update_server=False
[2025-06-04 01:26:56] 2025-06-03 23:25:48,617 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:26:56] 2025-06-03 23:25:48,617 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:26:56] 2025-06-03 23:25:48,617 | INFO     | aborting loop
[2025-06-04 01:26:56] 2025-06-03 23:25:48,617 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 01:26:56] 2025-06-03 23:25:48,618 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:26:56] 2025-06-03 23:25:48,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:26:56] 2025-06-03 23:25:48,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:26:56] 2025-06-03 23:25:49,314 | INFO     | all job control threads have been joined
[2025-06-04 01:26:56] 2025-06-03 23:25:49,622 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:26:56] 2025-06-03 23:25:49,623 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:26:56] 2025-06-03 23:25:49,640 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:26:56] 2025-06-03 23:25:49,713 | INFO     | all data control threads have been joined
[2025-06-04 01:26:56] 2025-06-03 23:25:49,862 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:26:56] 2025-06-03 23:25:49,903 | INFO     | all payload control threads have been joined
[2025-06-04 01:26:56] 2025-06-03 23:25:50,009 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:26:56] 2025-06-03 23:25:50,103 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:26:56] 2025-06-03 23:25:50,238 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:26:56] 2025-06-03 23:25:50,301 | INFO     | [job] validate thread has finished
[2025-06-04 01:26:56] 2025-06-03 23:25:50,319 | INFO     | [job] control thread has finished
[2025-06-04 01:26:56] 2025-06-03 23:25:50,543 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:26:56] 2025-06-03 23:25:50,718 | INFO     | [data] control thread has finished
[2025-06-04 01:26:56] 2025-06-03 23:25:50,850 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:26:56] 2025-06-03 23:25:50,908 | INFO     | [payload] control thread has finished
[2025-06-04 01:26:56] 2025-06-03 23:25:51,543 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:26:56] 2025-06-03 23:25:51,768 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:26:56] 2025-06-03 23:25:52,015 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:26:56] 2025-06-03 23:25:52,549 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:26:56] 2025-06-03 23:25:55,774 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:26:56] 2025-06-03 23:25:59,614 | INFO     | job.realtimelogging is not enabled
[2025-06-04 01:26:56] 2025-06-03 23:26:00,619 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:26:56] 2025-06-03 23:26:01,535 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23142101624640)>', '<ExcThread(monitor, started 23141862569728)>']
[2025-06-04 01:26:56] 2025-06-03 23:26:01,683 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:26:56] 2025-06-03 23:26:01,683 | INFO     | [monitor] control thread has ended
[2025-06-04 01:26:56] 2025-06-03 23:26:06,558 | INFO     | all workflow threads have been joined
[2025-06-04 01:26:56] 2025-06-03 23:26:06,559 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:26:56] 2025-06-03 23:26:06,559 | INFO     | traces error code: 0
[2025-06-04 01:26:56] 2025-06-03 23:26:06,559 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:26:56] 2025-06-03 23:26:06,717 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:26:56] 2025-06-03 23:26:06,720 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:26:56] 2025-06-03 23:26:06,723 [wrapper] pilotpid: 2603267
[2025-06-04 01:26:56] 2025-06-03 23:26:06,726 [wrapper] Pilot exit status: 0
[2025-06-04 01:26:56] 2025-06-03 23:26:06,736 [wrapper] pandaids: 6668946934
[2025-06-04 01:26:56] 2025-06-03 23:26:06,811 [wrapper] cleanup supervisor_pilot 2995021 2603268
[2025-06-04 01:26:56] 2025-06-03 23:26:06,814 [wrapper] Test setup, not cleaning
[2025-06-04 01:26:56] 2025-06-03 23:26:06,817 [wrapper] apfmon messages muted
[2025-06-04 01:26:56] 2025-06-03 23:26:06,820 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:26:56] 2025-06-03 23:26:06,823 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:26:56]  *** Error codes and diagnostics ***
[2025-06-04 01:26:56]     "exeErrorCode": 0,
[2025-06-04 01:26:56]     "exeErrorDiag": "",
[2025-06-04 01:26:56]     "pilotErrorCode": 0,
[2025-06-04 01:26:56]     "pilotErrorDiag": "",
[2025-06-04 01:26:56]  *** Listing of results directory ***
[2025-06-04 01:26:56] total 422588
[2025-06-04 01:26:56] -rw-r--r-- 1 boinc boinc    495897 May 28 23:08 pilot3.tar.gz
[2025-06-04 01:26:56] -rwx------ 1 boinc boinc     37140 May 28 23:38 runpilot2-wrapper.sh
[2025-06-04 01:26:56] -rw-r--r-- 1 boinc boinc      5111 May 28 23:38 queuedata.json
[2025-06-04 01:26:56] -rw-r--r-- 1 boinc boinc       100 Jun  3 21:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:26:56] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 21:28 run_atlas
[2025-06-04 01:26:56] -rw-r--r-- 1 boinc boinc       105 Jun  3 21:28 job.xml
[2025-06-04 01:26:56] -rw-r--r-- 1 boinc boinc      6636 Jun  3 21:28 init_data.xml
[2025-06-04 01:26:56] -rw-r--r-- 2 boinc boinc 227513538 Jun  3 21:28 EVNT.44871834._003531.pool.root.1
[2025-06-04 01:26:56] -rw-r--r-- 2 boinc boinc     15093 Jun  3 21:28 start_atlas.sh
[2025-06-04 01:26:56] drwxrwx--x 2 boinc boinc      4096 Jun  3 21:28 shared
[2025-06-04 01:26:56] -rw-r--r-- 2 boinc boinc    508884 Jun  3 21:28 input.tar.gz
[2025-06-04 01:26:56] -rw-r--r-- 1 boinc boinc         0 Jun  3 21:28 boinc_lockfile
[2025-06-04 01:26:56] -rw-r--r-- 1 boinc boinc      2559 Jun  3 21:28 pandaJob.out
[2025-06-04 01:26:56] -rw------- 1 boinc boinc    986893 Jun  3 21:29 agis_schedconf.cvmfs.json
[2025-06-04 01:26:56] drwx------ 4 boinc boinc      4096 Jun  3 21:29 pilot3
[2025-06-04 01:26:56] -rw------- 1 boinc boinc 198058598 Jun  4 01:24 HITS.44871837._090776.pool.root.1
[2025-06-04 01:26:56] -rw------- 1 boinc boinc        95 Jun  4 01:24 pilot_heartbeat.json
[2025-06-04 01:26:56] -rw-r--r-- 1 boinc boinc       528 Jun  4 01:25 boinc_task_state.xml
[2025-06-04 01:26:56] -rw------- 1 boinc boinc      1034 Jun  4 01:25 memory_monitor_summary.json
[2025-06-04 01:26:56] -rw------- 1 boinc boinc   1603667 Jun  4 01:25 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:26:56] -rw------- 1 boinc boinc    349738 Jun  4 01:25 log.44871837._090776.job.log.tgz.1
[2025-06-04 01:26:56] -rw------- 1 boinc boinc      7726 Jun  4 01:25 heartbeat.json
[2025-06-04 01:26:56] -rw------- 1 boinc boinc      4558 Jun  4 01:26 pilotlog.txt
[2025-06-04 01:26:56] -rw------- 1 boinc boinc   1308608 Jun  4 01:26 log.44871837._090776.job.log.1
[2025-06-04 01:26:56] -rw------- 1 boinc boinc       357 Jun  4 01:26 output.list
[2025-06-04 01:26:56] -rw-r--r-- 1 boinc boinc       620 Jun  4 01:26 runtime_log
[2025-06-04 01:26:56] -rw------- 1 boinc boinc   1679360 Jun  4 01:26 result.tar.gz
[2025-06-04 01:26:56] -rw-r--r-- 1 boinc boinc      9026 Jun  4 01:26 runtime_log.err
[2025-06-04 01:26:56] -rw------- 1 boinc boinc       665 Jun  4 01:26 FLrMDmDfde7n9Rq4apOajLDm4fhM0noT9bVof3QYDmrBUKDmMYiOJm.diag
[2025-06-04 01:26:56] -rw-r--r-- 1 boinc boinc        26 Jun  4 01:26 wrapper_checkpoint.txt
[2025-06-04 01:26:56] -rw-r--r-- 1 boinc boinc      8192 Jun  4 01:26 boinc_mmap_file
[2025-06-04 01:26:56] -rw-r--r-- 1 boinc boinc     20994 Jun  4 01:26 stderr.txt
[2025-06-04 01:26:56] HITS file was successfully produced:
[2025-06-04 01:26:56] -rw------- 1 boinc boinc 198058598 Jun  4 01:24 shared/HITS.pool.root.1
[2025-06-04 01:26:56]  *** Contents of shared directory: ***
[2025-06-04 01:26:56] total 417768
[2025-06-04 01:26:56] -rw-r--r-- 2 boinc boinc 227513538 Jun  3 21:28 ATLAS.root_0
[2025-06-04 01:26:56] -rw-r--r-- 2 boinc boinc     15093 Jun  3 21:28 start_atlas.sh
[2025-06-04 01:26:56] -rw-r--r-- 2 boinc boinc    508884 Jun  3 21:28 input.tar.gz
[2025-06-04 01:26:56] -rw------- 1 boinc boinc 198058598 Jun  4 01:24 HITS.pool.root.1
[2025-06-04 01:26:56] -rw------- 1 boinc boinc   1679360 Jun  4 01:26 result.tar.gz
01:26:58 (2599531): run_atlas exited; CPU time 55097.483921
01:26:58 (2599531): called boinc_finish(0)

</stderr_txt>
]]>

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