Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:20:15 (29459): wrapper (7.7.26015): starting
20:20:15 (29459): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 20:20:16] Arguments: --nthreads 8
[2025-05-29 20:20:16] Threads: 8
[2025-05-29 20:20:16] Checking for CVMFS
[2025-05-29 20:20:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 20:20:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 20:20:17] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 20:20:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 20:20:18] 2.11.2.0 27995 24938 94132 146572 0 14 23909040 25165824 4586 130560 0 13610431 99.815 14794944 1776 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-29 20:20:18] CVMFS is ok
[2025-05-29 20:20:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 20:20:18] Checking for apptainer binary...
[2025-05-29 20:20:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 20:20:18] Running /usr/bin/apptainer --version
[2025-05-29 20:20:18] apptainer version 1.3.2-1.el7
[2025-05-29 20:20:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 20:20:29] cg-vwn460.simple-grid.lan
[2025-05-29 20:20:29] apptainer works
[2025-05-29 20:20:29] Set ATHENA_PROC_NUMBER=8
[2025-05-29 20:20:29] Set ATHENA_CORE_NUMBER=8
[2025-05-29 20:20:29] Starting ATLAS job with PandaID=6669088879
[2025-05-29 20:20:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 01:28:02]  *** The last 200 lines of the pilot log: ***
[2025-05-30 01:28:02] 2025-05-29 23:01:46,939 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 01:28:02] 2025-05-29 23:01:46,939 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 01:28:02] 2025-05-29 23:01:46,939 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 01:28:02] 2025-05-29 23:01:46,940 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 01:28:02] 2025-05-29 23:01:46,944 | INFO     | fitting pss+swap vs Time
[2025-05-30 01:28:02] 2025-05-29 23:01:46,945 | INFO     | sum of square deviations: 5770452380.0
[2025-05-30 01:28:02] 2025-05-29 23:01:46,947 | INFO     | sum of deviations: 78511040578.99997
[2025-05-30 01:28:02] 2025-05-29 23:01:46,951 | INFO     | mean x: 1748551551.0
[2025-05-30 01:28:02] 2025-05-29 23:01:46,951 | INFO     | mean y: 2457448.00754717
[2025-05-30 01:28:02] 2025-05-29 23:01:46,951 | INFO     | -- intersect: -23787809368.999676
[2025-05-30 01:28:02] 2025-05-29 23:01:46,951 | INFO     | intersect: -23787809368.999676
[2025-05-30 01:28:02] 2025-05-29 23:01:46,951 | INFO     | chi2: 7.638380143701028
[2025-05-30 01:28:02] 2025-05-29 23:01:46,952 | INFO     | sum of square deviations: 5449944045.0
[2025-05-30 01:28:02] 2025-05-29 23:01:46,954 | INFO     | sum of deviations: 94328159897.00002
[2025-05-30 01:28:02] 2025-05-29 23:01:46,954 | INFO     | mean x: 1748551398.5
[2025-05-30 01:28:02] 2025-05-29 23:01:46,954 | INFO     | mean y: 2464846.7615384613
[2025-05-30 01:28:02] 2025-05-29 23:01:46,954 | INFO     | -- intersect: -30261632278.630325
[2025-05-30 01:28:02] 2025-05-29 23:01:46,954 | INFO     | intersect: -30261632278.630325
[2025-05-30 01:28:02] 2025-05-29 23:01:46,955 | INFO     | chi2: 6.9345762667559185
[2025-05-30 01:28:02] 2025-05-29 23:01:46,955 | INFO     | current chi2=6.9345762667559185 (change=9.214046220591671 %)
[2025-05-30 01:28:02] 2025-05-29 23:01:46,955 | INFO     | right removable region: 259
[2025-05-30 01:28:02] 2025-05-29 23:01:46,955 | INFO     | sum of square deviations: 5449944045.0
[2025-05-30 01:28:02] 2025-05-29 23:01:46,957 | INFO     | sum of deviations: -14851001836.500004
[2025-05-30 01:28:02] 2025-05-29 23:01:46,958 | INFO     | mean x: 1748551703.5
[2025-05-30 01:28:02] 2025-05-29 23:01:46,958 | INFO     | mean y: 2501844.4730769233
[2025-05-30 01:28:02] 2025-05-29 23:01:46,958 | INFO     | -- intersect: 4767274536.720729
[2025-05-30 01:28:02] 2025-05-29 23:01:46,958 | INFO     | intersect: 4767274536.720729
[2025-05-30 01:28:02] 2025-05-29 23:01:46,958 | INFO     | chi2: 2.679920437138082
[2025-05-30 01:28:02] 2025-05-29 23:01:46,958 | INFO     | current chi2=2.679920437138082 (change=64.91506855222346 %)
[2025-05-30 01:28:02] 2025-05-29 23:01:46,959 | INFO     | sum of square deviations: 5141528960.0
[2025-05-30 01:28:02] 2025-05-29 23:01:46,961 | INFO     | sum of deviations: -64520461462.999985
[2025-05-30 01:28:02] 2025-05-29 23:01:46,961 | INFO     | mean x: 1748551856.0
[2025-05-30 01:28:02] 2025-05-29 23:01:46,961 | INFO     | mean y: 2526274.9921568627
[2025-05-30 01:28:02] 2025-05-29 23:01:46,961 | INFO     | -- intersect: 21944904411.690445
[2025-05-30 01:28:02] 2025-05-29 23:01:46,961 | INFO     | intersect: 21944904411.690445
[2025-05-30 01:28:02] 2025-05-29 23:01:46,962 | INFO     | chi2: 1.013036364045214
[2025-05-30 01:28:02] 2025-05-29 23:01:46,962 | INFO     | current chi2=1.013036364045214 (change=62.199013448061635 %)
[2025-05-30 01:28:02] 2025-05-29 23:01:46,962 | INFO     | sum of square deviations: 4844974562.5
[2025-05-30 01:28:02] 2025-05-29 23:01:46,964 | INFO     | sum of deviations: -64287023460.50001
[2025-05-30 01:28:02] 2025-05-29 23:01:46,964 | INFO     | mean x: 1748552008.5
[2025-05-30 01:28:02] 2025-05-29 23:01:46,964 | INFO     | mean y: 2526115.564
[2025-05-30 01:28:02] 2025-05-29 23:01:46,965 | INFO     | -- intersect: 23203722023.255394
[2025-05-30 01:28:02] 2025-05-29 23:01:46,965 | INFO     | intersect: 23203722023.255394
[2025-05-30 01:28:02] 2025-05-29 23:01:46,965 | INFO     | chi2: 0.9832125936884925
[2025-05-30 01:28:02] 2025-05-29 23:01:46,965 | INFO     | current chi2=0.9832125936884925 (change=2.9439980059186173 %)
[2025-05-30 01:28:02] 2025-05-29 23:01:46,965 | INFO     | left removable region: 30
[2025-05-30 01:28:02] 2025-05-29 23:01:46,966 | INFO     | sum of square deviations: 3723716330.0
[2025-05-30 01:28:02] 2025-05-29 23:01:46,967 | INFO     | sum of deviations: -22598751068.99999
[2025-05-30 01:28:02] 2025-05-29 23:01:46,967 | INFO     | mean x: 1748552283.0
[2025-05-30 01:28:02] 2025-05-29 23:01:46,967 | INFO     | mean y: 2521384.860262009
[2025-05-30 01:28:02] 2025-05-29 23:01:46,968 | INFO     | -- intersect: 10614258228.58719
[2025-05-30 01:28:02] 2025-05-29 23:01:46,968 | INFO     | intersect: 10614258228.58719
[2025-05-30 01:28:02] 2025-05-29 23:01:46,968 | INFO     | chi2: 0.1390765216513767
[2025-05-30 01:28:02] 2025-05-29 23:01:46,968 | INFO     | -- intersect: 10614258228.58719
[2025-05-30 01:28:02] 2025-05-29 23:01:46,968 | INFO     | current memory leak: -6.07 B/s (using 229 data points, chi2=0.14)
[2025-05-30 01:28:02] 2025-05-29 23:01:46,969 | INFO     | ..............................
[2025-05-30 01:28:02] 2025-05-29 23:01:46,969 | INFO     | . Timing measurements:
[2025-05-30 01:28:02] 2025-05-29 23:01:46,969 | INFO     | . get job = 0 s
[2025-05-30 01:28:02] 2025-05-29 23:01:46,970 | INFO     | . initial setup = 7 s
[2025-05-30 01:28:02] 2025-05-29 23:01:46,970 | INFO     | . payload setup = 144 s
[2025-05-30 01:28:02] 2025-05-29 23:01:46,970 | INFO     | . stage-in = 0 s
[2025-05-30 01:28:02] 2025-05-29 23:01:46,970 | INFO     | . payload execution = 16258 s
[2025-05-30 01:28:02] 2025-05-29 23:01:46,970 | INFO     | . stage-out = 9 s
[2025-05-30 01:28:02] 2025-05-29 23:01:46,970 | INFO     | . log creation = 1 s
[2025-05-30 01:28:02] 2025-05-29 23:01:46,970 | INFO     | ..............................
[2025-05-30 01:28:02] 2025-05-29 23:01:47,107 | INFO     | 
[2025-05-30 01:28:02] 2025-05-29 23:01:47,107 | INFO     | job summary report
[2025-05-30 01:28:02] 2025-05-29 23:01:47,107 | INFO     | --------------------------------------------------
[2025-05-30 01:28:02] 2025-05-29 23:01:47,107 | INFO     | PanDA job id: 6669088879
[2025-05-30 01:28:02] 2025-05-29 23:01:47,107 | INFO     | task id: 44871837
[2025-05-30 01:28:02] 2025-05-29 23:01:47,107 | INFO     | errors: (none)
[2025-05-30 01:28:02] 2025-05-29 23:01:47,107 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 01:28:02] 2025-05-29 23:01:47,107 | INFO     | pilot state: finished 
[2025-05-30 01:28:02] 2025-05-29 23:01:47,107 | INFO     | transexitcode: 0
[2025-05-30 01:28:02] 2025-05-29 23:01:47,108 | INFO     | exeerrorcode: 0
[2025-05-30 01:28:02] 2025-05-29 23:01:47,108 | INFO     | exeerrordiag: 
[2025-05-30 01:28:02] 2025-05-29 23:01:47,108 | INFO     | exitcode: 0
[2025-05-30 01:28:02] 2025-05-29 23:01:47,108 | INFO     | exitmsg: OK
[2025-05-30 01:28:02] 2025-05-29 23:01:47,108 | INFO     | cpuconsumptiontime: 61190 s
[2025-05-30 01:28:02] 2025-05-29 23:01:47,108 | INFO     | nevents: 400
[2025-05-30 01:28:02] 2025-05-29 23:01:47,108 | INFO     | neventsw: 0
[2025-05-30 01:28:02] 2025-05-29 23:01:47,108 | INFO     | pid: 13763
[2025-05-30 01:28:02] 2025-05-29 23:01:47,108 | INFO     | pgrp: 13763
[2025-05-30 01:28:02] 2025-05-29 23:01:47,108 | INFO     | corecount: 8
[2025-05-30 01:28:02] 2025-05-29 23:01:47,108 | INFO     | event service: False
[2025-05-30 01:28:02] 2025-05-29 23:01:47,108 | INFO     | sizes: {0: 2405062, 1: 2405261, 12: 2405261, 23: 2405289, 33: 2405317, 44: 2405373, 55: 2405529, 66: 2405557, 76: 2405585, 87: 2405641, 93: 2405875, 98: 2406183, 1
[2025-05-30 01:28:02] 2025-05-29 23:01:47,108 | INFO     | --------------------------------------------------
[2025-05-30 01:28:02] 2025-05-29 23:01:47,109 | INFO     | 
[2025-05-30 01:28:02] 2025-05-29 23:01:47,109 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-05-30 01:28:02] 2025-05-29 23:01:47,691 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 01:28:02] 2025-05-29 23:01:47,691 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 01:28:02] 2025-05-29 23:01:47,691 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 01:28:02] 2025-05-29 23:01:47,692 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 01:28:02] 2025-05-29 23:01:47,692 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 01:28:02] 2025-05-29 23:01:47,692 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 01:28:02] 2025-05-29 23:01:47,692 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 01:28:02] 2025-05-29 23:01:47,692 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 01:28:02] 2025-05-29 23:01:47,692 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 01:28:02] 2025-05-29 23:01:47,692 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 01:28:02] 2025-05-29 23:01:47,692 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 01:28:02] 2025-05-29 23:01:47,692 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 01:28:02] 2025-05-29 23:01:47,692 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 01:28:02] 2025-05-29 23:01:47,692 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 01:28:02] 2025-05-29 23:01:47,692 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 01:28:02] 2025-05-29 23:01:47,693 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 01:28:02] 2025-05-29 23:01:47,693 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 01:28:02] 2025-05-29 23:01:47,693 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 01:28:02] 2025-05-29 23:01:47,693 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 01:28:02] 2025-05-29 23:01:47,693 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 01:28:02] 2025-05-29 23:01:47,693 | INFO     | job 6669088879 has completed (purged errors)
[2025-05-30 01:28:02] 2025-05-29 23:01:47,693 | INFO     | overall cleanup function is called
[2025-05-30 01:28:02] 2025-05-29 23:01:48,702 | INFO     | --- collectZombieJob: --- 10, [13763]
[2025-05-30 01:28:02] 2025-05-29 23:01:48,702 | INFO     | zombie collector waiting for pid 13763
[2025-05-30 01:28:02] 2025-05-29 23:01:48,702 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 01:28:02] 2025-05-29 23:01:48,702 | INFO     | collected zombie processes
[2025-05-30 01:28:02] 2025-05-29 23:01:48,702 | INFO     | will attempt to kill all subprocesses of pid=13763
[2025-05-30 01:28:02] 2025-05-29 23:01:48,792 | INFO     | process IDs to be killed: [13763] (in reverse order)
[2025-05-30 01:28:02] 2025-05-29 23:01:49,601 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 01:28:02] 2025-05-29 23:01:49,601 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 01:28:02] 2025-05-29 23:01:49,604 | INFO     | did not find any defunct processes belonging to 13763
[2025-05-30 01:28:02] 2025-05-29 23:01:49,607 | INFO     | did not find any defunct processes belonging to 13763
[2025-05-30 01:28:02] 2025-05-29 23:01:49,608 | INFO     | ready for new job
[2025-05-30 01:28:02] 2025-05-29 23:01:49,608 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 01:28:02] 2025-05-29 23:01:49,610 | INFO     | **************************************
[2025-05-30 01:28:02] 2025-05-29 23:01:49,610 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 01:28:02] 2025-05-29 23:01:49,610 | INFO     | **************************************
[2025-05-30 01:28:02] 2025-05-29 23:01:49,610 | INFO     | 
[2025-05-30 01:28:02] 2025-05-29 23:01:49,611 | INFO     | pilot is running in a VM
[2025-05-30 01:28:02] 2025-05-29 23:01:49,611 | INFO     | architecture information:
[2025-05-30 01:28:02] 2025-05-29 23:01:49,612 | INFO     | executing command: cat /etc/os-release
[2025-05-30 01:28:02] 2025-05-29 23:01:49,881 | INFO     | cat /etc/os-release:
[2025-05-30 01:28:02] NAME="CentOS Linux"
[2025-05-30 01:28:02] VERSION="7 (Core)"
[2025-05-30 01:28:02] ID="centos"
[2025-05-30 01:28:02] ID_LIKE="rhel fedora"
[2025-05-30 01:28:02] VERSION_ID="7"
[2025-05-30 01:28:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 01:28:02] ANSI_COLOR="0;31"
[2025-05-30 01:28:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 01:28:02] HOME_URL="https://www.centos.org/"
[2025-05-30 01:28:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 01:28:02] 
[2025-05-30 01:28:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 01:28:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 01:28:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 01:28:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 01:28:02] 
[2025-05-30 01:28:02] 2025-05-29 23:01:49,882 | INFO     | **************************************
[2025-05-30 01:28:02] 2025-05-29 23:01:50,386 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-05-30 01:28:02] 2025-05-29 23:01:50,663 | INFO     | sufficient remaining disk space (495972253696 B)
[2025-05-30 01:28:02] 2025-05-29 23:01:50,664 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 01:28:02] 2025-05-29 23:01:50,664 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 01:28:02] 2025-05-29 23:01:50,664 | INFO     | update_server=False
[2025-05-30 01:28:02] 2025-05-29 23:01:50,664 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 01:28:02] 2025-05-29 23:01:50,664 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 01:28:02] 2025-05-29 23:01:50,668 | INFO     | aborting loop
[2025-05-30 01:28:02] 2025-05-29 23:01:50,665 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 01:28:02] 2025-05-29 23:01:50,949 | INFO     | all payload control threads have been joined
[2025-05-30 01:28:02] 2025-05-29 23:01:51,096 | INFO     | all data control threads have been joined
[2025-05-30 01:28:02] 2025-05-29 23:01:51,198 | INFO     | PID=5705 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-05-30 01:28:02] 2025-05-29 23:01:51,198 | INFO     | .. there are 9 such processes running
[2025-05-30 01:28:02] 2025-05-29 23:01:51,198 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 01:28:02] 2025-05-29 23:01:51,199 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 01:28:02] 2025-05-29 23:01:51,199 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 01:28:02] 2025-05-29 23:01:51,456 | INFO     | all job control threads have been joined
[2025-05-30 01:28:02] 2025-05-29 23:01:51,670 | INFO     | [job] retrieve thread has finished
[2025-05-30 01:28:02] 2025-05-29 23:01:51,674 | INFO     | [job] job monitor thread has finished
[2025-05-30 01:28:02] 2025-05-29 23:01:51,955 | INFO     | [payload] control thread has finished
[2025-05-30 01:28:02] 2025-05-29 23:01:51,998 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 01:28:02] 2025-05-29 23:01:52,102 | INFO     | [data] control thread has finished
[2025-05-30 01:28:02] 2025-05-29 23:01:52,121 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 01:28:02] 2025-05-29 23:01:52,205 | INFO     | [job] validate thread has finished
[2025-05-30 01:28:02] 2025-05-29 23:01:52,462 | INFO     | [job] control thread has finished
[2025-05-30 01:28:02] 2025-05-29 23:01:52,549 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 01:28:02] 2025-05-29 23:01:52,594 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 01:28:02] 2025-05-29 23:01:52,665 | INFO     | [payload] failed_post thread has finished
[2025-05-30 01:28:02] 2025-05-29 23:01:52,679 | INFO     | [data] copytool_out thread has finished
[2025-05-30 01:28:02] 2025-05-29 23:01:52,757 | INFO     | [data] copytool_in thread has finished
[2025-05-30 01:28:02] 2025-05-29 23:01:52,954 | INFO     | [payload] validate_post thread has finished
[2025-05-30 01:28:02] 2025-05-29 23:01:53,044 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 01:28:02] 2025-05-29 23:01:53,121 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 01:28:02] 2025-05-29 23:01:53,127 | INFO     | [job] queue monitor thread has finished
[2025-05-30 01:28:02] 2025-05-29 23:01:57,130 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 01:28:02] 2025-05-29 23:01:57,435 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140401557100352)>', '<ExcThread(monitor, started 140401105155840)>']
[2025-05-30 01:28:02] 2025-05-29 23:01:58,241 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 01:28:02] 2025-05-29 23:01:58,241 | INFO     | [monitor] control thread has ended
[2025-05-30 01:28:02] 2025-05-29 23:02:02,460 | INFO     | all workflow threads have been joined
[2025-05-30 01:28:02] 2025-05-29 23:02:02,460 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 01:28:02] 2025-05-29 23:02:02,460 | INFO     | traces error code: 0
[2025-05-30 01:28:02] 2025-05-29 23:02:02,460 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 01:28:02] 2025-05-29 23:02:02,866 [wrapper] ==== pilot stdout END ====
[2025-05-30 01:28:02] 2025-05-29 23:02:02,968 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 01:28:02] 2025-05-29 23:02:03,066 [wrapper] pilotpid: 5705
[2025-05-30 01:28:02] 2025-05-29 23:02:03,169 [wrapper] Pilot exit status: 0
[2025-05-30 01:28:02] 2025-05-29 23:02:03,689 [wrapper] pandaids: 6669088879
[2025-05-30 01:28:02] 2025-05-29 23:02:04,551 [wrapper] cleanup supervisor_pilot 17449 5706
[2025-05-30 01:28:02] 2025-05-29 23:02:04,679 [wrapper] Test setup, not cleaning
[2025-05-30 01:28:02] 2025-05-29 23:02:04,737 [wrapper] apfmon messages muted
[2025-05-30 01:28:02] 2025-05-29 23:02:04,788 [wrapper] ==== wrapper stdout END ====
[2025-05-30 01:28:02] 2025-05-29 23:02:04,874 [wrapper] ==== wrapper stderr END ====
[2025-05-30 01:28:02]  *** Error codes and diagnostics ***
[2025-05-30 01:28:02]     "exeErrorCode": 0,
[2025-05-30 01:28:02]     "exeErrorDiag": "",
[2025-05-30 01:28:02]     "pilotErrorCode": 0,
[2025-05-30 01:28:02]     "pilotErrorDiag": "",
[2025-05-30 01:28:02]  *** Listing of results directory ***
[2025-05-30 01:28:02] total 418340
[2025-05-30 01:28:02] -rw-r--r--. 1 boinc boinc    495897 May 29 02:49 pilot3.tar.gz
[2025-05-30 01:28:02] -rw-r--r--. 1 boinc boinc      5111 May 29 02:57 queuedata.json
[2025-05-30 01:28:02] -rwx------. 1 boinc boinc     37140 May 29 02:57 runpilot2-wrapper.sh
[2025-05-30 01:28:02] -rw-r--r--. 1 boinc boinc       100 May 29 20:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 01:28:02] -rwxr-xr-x. 1 boinc boinc      7986 May 29 20:20 run_atlas
[2025-05-30 01:28:02] -rw-r--r--. 1 boinc boinc       105 May 29 20:20 job.xml
[2025-05-30 01:28:02] -rw-r--r--. 1 boinc boinc      6372 May 29 20:20 init_data.xml
[2025-05-30 01:28:02] -rw-r--r--. 2 boinc boinc 223359444 May 29 20:20 EVNT.44871834._003608.pool.root.1
[2025-05-30 01:28:02] -rw-r--r--. 2 boinc boinc     15093 May 29 20:20 start_atlas.sh
[2025-05-30 01:28:02] drwxrwx--x. 2 boinc boinc        68 May 29 20:20 shared
[2025-05-30 01:28:02] -rw-r--r--. 2 boinc boinc    508879 May 29 20:20 input.tar.gz
[2025-05-30 01:28:02] -rw-r--r--. 1 boinc boinc         0 May 29 20:20 boinc_lockfile
[2025-05-30 01:28:02] -rw-r--r--. 1 boinc boinc      2558 May 29 20:20 pandaJob.out
[2025-05-30 01:28:02] -rw-------. 1 boinc boinc    992706 May 29 20:23 agis_schedconf.cvmfs.json
[2025-05-30 01:28:02] drwx------. 4 boinc boinc      4096 May 29 20:23 pilot3
[2025-05-30 01:28:02] -rw-------. 1 boinc boinc 197540982 May 30 00:58 HITS.44871837._092807.pool.root.1
[2025-05-30 01:28:02] -rw-r--r--. 1 boinc boinc       531 May 30 00:59 boinc_task_state.xml
[2025-05-30 01:28:02] -rw-------. 1 boinc boinc      1014 May 30 01:00 memory_monitor_summary.json
[2025-05-30 01:28:02] -rw-------. 1 boinc boinc   1603667 May 30 01:00 agis_ddmendpoints.agis.ALL.json
[2025-05-30 01:28:02] -rw-------. 1 boinc boinc    408105 May 30 01:00 log.44871837._092807.job.log.tgz.1
[2025-05-30 01:28:02] -rw-------. 1 boinc boinc        95 May 30 01:00 pilot_heartbeat.json
[2025-05-30 01:28:02] -rw-------. 1 boinc boinc      7689 May 30 01:01 heartbeat.json
[2025-05-30 01:28:02] -rw-------. 1 boinc boinc      4807 May 30 01:02 pilotlog.txt
[2025-05-30 01:28:02] -rw-------. 1 boinc boinc   1419733 May 30 01:02 log.44871837._092807.job.log.1
[2025-05-30 01:28:02] -rw-------. 1 boinc boinc       357 May 30 01:02 output.list
[2025-05-30 01:28:02] -rw-r--r--. 1 boinc boinc       620 May 30 01:02 runtime_log
[2025-05-30 01:28:02] -rw-------. 1 boinc boinc   1843200 May 30 01:02 result.tar.gz
[2025-05-30 01:28:02] -rw-------. 1 boinc boinc       657 May 30 01:02 ucnKDmylge7n9Rq4apOajLDm4fhM0noT9bVof3QYDmONUKDm6zoROm.diag
[2025-05-30 01:28:02] -rw-r--r--. 1 boinc boinc      8659 May 30 01:02 runtime_log.err
[2025-05-30 01:28:02] -rw-r--r--. 1 boinc boinc      8192 May 30 01:28 boinc_mmap_file
[2025-05-30 01:28:02] -rw-r--r--. 1 boinc boinc        28 May 30 01:28 wrapper_checkpoint.txt
[2025-05-30 01:28:02] -rw-r--r--. 1 boinc boinc     20588 May 30 01:28 stderr.txt
[2025-05-30 01:28:02] HITS file was successfully produced:
[2025-05-30 01:28:02] -rw-------. 1 boinc boinc 197540982 May 30 00:58 shared/HITS.pool.root.1
[2025-05-30 01:28:02]  *** Contents of shared directory: ***
[2025-05-30 01:28:02] total 413356
[2025-05-30 01:28:02] -rw-r--r--. 2 boinc boinc 223359444 May 29 20:20 ATLAS.root_0
[2025-05-30 01:28:02] -rw-r--r--. 2 boinc boinc     15093 May 29 20:20 start_atlas.sh
[2025-05-30 01:28:02] -rw-r--r--. 2 boinc boinc    508879 May 29 20:20 input.tar.gz
[2025-05-30 01:28:02] -rw-------. 1 boinc boinc 197540982 May 30 00:58 HITS.pool.root.1
[2025-05-30 01:28:02] -rw-------. 1 boinc boinc   1843200 May 30 01:02 result.tar.gz
01:28:04 (29459): run_atlas exited; CPU time 61385.025627
01:28:04 (29459): called boinc_finish(0)

</stderr_txt>
]]>

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