Stderr output

<core_client_version>8.2.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-28 23:46:29 (4852): Detected: vboxwrapper 26206
2025-05-28 23:46:29 (4852): Detected: BOINC client v8.2.1
2025-05-28 23:46:34 (4852): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-05-28 23:46:35 (4852): Successfully copied 'init_data.xml' to the shared directory.
2025-05-28 23:46:35 (4852): Create VM. (boinc_6ec6d38f576168f2, slot#8)
2025-05-28 23:46:36 (4852): Setting Memory Size for VM. (4300MB)
2025-05-28 23:46:36 (4852): Setting CPU Count for VM. (3)
2025-05-28 23:46:36 (4852): Setting Chipset Options for VM.
2025-05-28 23:46:37 (4852): Setting Graphics Controller Options for VM.
2025-05-28 23:46:37 (4852): Setting Boot Options for VM.
2025-05-28 23:46:37 (4852): Setting Network Configuration for NAT.
2025-05-28 23:46:37 (4852): Enabling VM Network Access.
2025-05-28 23:46:38 (4852): Disabling USB Support for VM.
2025-05-28 23:46:38 (4852): Disabling COM Port Support for VM.
2025-05-28 23:46:38 (4852): Disabling LPT Port Support for VM.
2025-05-28 23:46:39 (4852): Disabling Audio Support for VM.
2025-05-28 23:46:39 (4852): Disabling Clipboard Support for VM.
2025-05-28 23:46:39 (4852): Disabling Drag and Drop Support for VM.
2025-05-28 23:46:39 (4852): Adding storage controller(s) to VM.
2025-05-28 23:46:40 (4852): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-28 23:46:41 (4852): Adding VirtualBox Guest Additions to VM.
2025-05-28 23:46:41 (4852): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-28 23:46:41 (4852): forwarding host port 56122 to guest port 80
2025-05-28 23:46:41 (4852): Enabling remote desktop for VM.
2025-05-28 23:46:42 (4852): Required extension pack not installed, remote desktop not enabled.
2025-05-28 23:46:42 (4852): Enabling shared directory for VM.
2025-05-28 23:46:43 (4852): Starting VM using VBoxManage interface. (boinc_6ec6d38f576168f2, slot#8)
2025-05-28 23:46:59 (4852): Successfully started VM. (PID = '10340')
2025-05-28 23:46:59 (4852): Reporting VM Process ID to BOINC.
2025-05-28 23:46:59 (4852): Guest Log: BIOS: VirtualBox 7.1.8
2025-05-28 23:46:59 (4852): Guest Log: CPUID EDX: 0x178bfbff
2025-05-28 23:46:59 (4852): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-28 23:46:59 (4852): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-28 23:46:59 (4852): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-28 23:46:59 (4852): Detected: Web Application Enabled (http://localhost:56122)
2025-05-28 23:46:59 (4852): Preference change detected
2025-05-28 23:46:59 (4852): Setting CPU throttle for VM. (100%)
2025-05-28 23:47:00 (4852): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-28 23:47:01 (4852): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-28 23:47:01 (4852): Guest Log: BIOS: Booting from Hard Disk...
2025-05-28 23:47:05 (4852): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-28 23:47:05 (4852): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-28 23:47:05 (4852): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-28 23:47:16 (4852): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-28 23:47:16 (4852): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-28 23:47:35 (4852): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-28 23:47:35 (4852): Guest Log: 00:00:00.000295 main     Log opened 2025-05-28T23:47:33.315935000Z
2025-05-28 23:47:35 (4852): Guest Log: 00:00:00.000608 main     OS Product: Linux
2025-05-28 23:47:35 (4852): Guest Log: 00:00:00.000673 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-28 23:47:35 (4852): Guest Log: 00:00:00.000746 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-28 23:47:35 (4852): Guest Log: 00:00:00.000804 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-28 23:47:35 (4852): Guest Log: 00:00:00.000806 main     Process ID: 1294
2025-05-28 23:47:35 (4852): Guest Log: 00:00:00.000807 main     Package type: LINUX_64BITS_GENERIC
2025-05-28 23:47:35 (4852): Guest Log: 00:00:00.002252 main     5.2.32 r132073 started. Verbose level = 0
2025-05-28 23:47:35 (4852): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-28 23:47:35 (4852): Guest Log: [INFO] Mounting shared directory
2025-05-28 23:47:36 (4852): Guest Log: [INFO] Checking for init_data.xml
2025-05-28 23:47:45 (4852): Guest Log: 00:00:10.021222 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 212 006 293 000ns (GuestNow=1 748 501 265 327 027 000 ns GuestLast=1 748 476 053 320 734 000 ns fSetTimeLastLoop=true )
2025-05-28 23:47:51 (4852): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-28 23:47:51 (4852): Guest Log: [INFO] Detected branch: prod
2025-05-28 23:47:52 (4852): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-28 23:47:52 (4852): Guest Log: Copying input files
2025-05-28 23:47:55 (4852): Guest Log: Copied input files into RunAtlas.
2025-05-28 23:47:55 (4852): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-28 23:47:55 (4852): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-28 23:47:55 (4852): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-28 23:47:55 (4852): Guest Log: Further information can be found at the LHC@home message board.
2025-05-28 23:48:11 (4852): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-28 23:48:11 (4852): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-28 23:48:11 (4852): Guest Log: 2.6.3.0 1577 0 32164 146546 3 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-28 23:48:16 (4852): Guest Log: copied the webapp to /var/www
2025-05-28 23:48:16 (4852): Guest Log: ATHENA_PROC_NUMBER=3
2025-05-28 23:48:16 (4852): Guest Log: ATHENA_CORE_NUMBER=3
2025-05-28 23:48:17 (4852): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-28 23:48:17 (4852): Guest Log:  *** Starting ATLAS job. (PandaID=6668990568 taskID=44871837) ***
2025-05-29 01:27:06 (4852): Status Report: Elapsed Time: '6000.000000'
2025-05-29 01:27:06 (4852): Status Report: CPU Time: '14723.468750'
2025-05-29 03:07:13 (4852): Status Report: Elapsed Time: '12000.000000'
2025-05-29 03:07:13 (4852): Status Report: CPU Time: '32571.906250'
2025-05-29 04:47:21 (4852): Status Report: Elapsed Time: '18000.000000'
2025-05-29 04:47:21 (4852): Status Report: CPU Time: '50415.671875'
2025-05-29 06:27:28 (4852): Status Report: Elapsed Time: '24000.000000'
2025-05-29 06:27:28 (4852): Status Report: CPU Time: '68247.078125'
2025-05-29 08:07:35 (4852): Status Report: Elapsed Time: '30000.000000'
2025-05-29 08:07:35 (4852): Status Report: CPU Time: '86082.640625'
2025-05-29 09:47:43 (4852): Status Report: Elapsed Time: '36000.000000'
2025-05-29 09:47:43 (4852): Status Report: CPU Time: '103920.921875'
2025-05-29 11:27:50 (4852): Status Report: Elapsed Time: '42000.000000'
2025-05-29 11:27:50 (4852): Status Report: CPU Time: '121765.734375'
2025-05-29 13:07:57 (4852): Status Report: Elapsed Time: '48000.000000'
2025-05-29 13:07:57 (4852): Status Report: CPU Time: '139605.515625'
2025-05-29 13:58:25 (4852): Guest Log:  *** Job finished ***
2025-05-29 13:58:25 (4852): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:14,342 | INFO     | [payload] control thread has finished
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:14,497 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:18,684 | INFO     | [data] queue_monitor thread has finished
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:18,897 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140695851603776)>', '<ExcThread(monitor, started 140695268484864)>']
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:19,060 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:19,060 | INFO     | [monitor] control thread has ended
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:23,917 | INFO     | all workflow threads have been joined
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:23,918 | INFO     | end of generic workflow (traces error code: 0)
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:23,918 | INFO     | traces error code: 0
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:23,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:24,281 [wrapper] ==== pilot stdout END ====
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:24,288 [wrapper] ==== wrapper stdout RESUME ====
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:24,295 [wrapper] pilotpid: 5941
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:24,306 [wrapper] Pilot exit status: 0
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:24,415 [wrapper] pandaids: 6668990568
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:24,478 [wrapper] cleanup supervisor_pilot  5488 5942
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:24,486 [wrapper] Test setup, not cleaning
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:24,493 [wrapper] apfmon messages muted
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:24,500 [wrapper] ==== wrapper stdout END ====
2025-05-29 13:58:25 (4852): Guest Log: 2025-05-29 20:58:24,512 [wrapper] ==== wrapper stderr END ====
2025-05-29 13:58:25 (4852): Guest Log:  *** Error codes and diagnostics ***
2025-05-29 13:58:25 (4852): Guest Log:     "exeErrorCode": 0,
2025-05-29 13:58:25 (4852): Guest Log:     "exeErrorDiag": "",
2025-05-29 13:58:25 (4852): Guest Log:     "pilotErrorCode": 0,
2025-05-29 13:58:25 (4852): Guest Log:     "pilotErrorDiag": "",
2025-05-29 13:58:25 (4852): Guest Log:  *** Listing of results directory ***
2025-05-29 13:58:25 (4852): Guest Log: total 205092
2025-05-29 13:58:25 (4852): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 28 23:19 pilot3.tar.gz
2025-05-29 13:58:25 (4852): Guest Log: -rwx------. 1 atlas atlas     37140 May 28 23:58 runpilot2-wrapper.sh
2025-05-29 13:58:25 (4852): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 28 23:58 queuedata.json
2025-05-29 13:58:25 (4852): Guest Log: -rwxr-xr-x. 1 atlas atlas      7738 May 29 06:47 init_data.xml
2025-05-29 13:58:25 (4852): Guest Log: -rwxr-xr-x. 1 atlas atlas    508877 May 29 06:47 input.tar.gz
2025-05-29 13:58:25 (4852): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 May 29 06:47 start_atlas.sh
2025-05-29 13:58:25 (4852): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 29 06:47 EVNT.44871834._003584.pool.root.1 -> /data/./ATLAS.root_0
2025-05-29 13:58:25 (4852): Guest Log: -rw-r--r--. 1 atlas atlas      2559 May 29 06:48 pandaJob.out
2025-05-29 13:58:25 (4852): Guest Log: -rw-------. 1 atlas atlas    993147 May 29 06:52 agis_schedconf.cvmfs.json
2025-05-29 13:58:25 (4852): Guest Log: drwx------. 4 atlas atlas      4096 May 29 06:53 pilot3
2025-05-29 13:58:25 (4852): Guest Log: -rw-------. 1 atlas atlas 196716853 May 29 20:56 HITS.44871837._092161.pool.root.1
2025-05-29 13:58:25 (4852): Guest Log: -rw-------. 1 atlas atlas      1032 May 29 20:57 memory_monitor_summary.json
2025-05-29 13:58:25 (4852): Guest Log: -rw-------. 1 atlas atlas   1603667 May 29 20:57 agis_ddmendpoints.agis.ALL.json
2025-05-29 13:58:25 (4852): Guest Log: -rw-------. 1 atlas atlas    629547 May 29 20:57 log.44871837._092161.job.log.tgz.1
2025-05-29 13:58:25 (4852): Guest Log: -rw-------. 1 atlas atlas        95 May 29 20:57 pilot_heartbeat.json
2025-05-29 13:58:25 (4852): Guest Log: -rw-------. 1 atlas atlas      7692 May 29 20:58 heartbeat.json
2025-05-29 13:58:25 (4852): Guest Log: -rw-------. 1 atlas atlas      4413 May 29 20:58 pilotlog.txt
2025-05-29 13:58:25 (4852): Guest Log: -rw-------. 1 atlas atlas   4129933 May 29 20:58 log.44871837._092161.job.log.1
2025-05-29 13:58:25 (4852): Guest Log: -rw-------. 1 atlas atlas       357 May 29 20:58 output.list
2025-05-29 13:58:25 (4852): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 29 20:58 runtime_log
2025-05-29 13:58:25 (4852): Guest Log: -rw-------. 1 atlas atlas   4782080 May 29 20:58 result.tar.gz
2025-05-29 13:58:25 (4852): Guest Log: -rw-------. 1 atlas atlas       657 May 29 20:58 SfJLDmRqfe7n9Rq4apOajLDm4fhM0noT9bVof3QYDm4KUKDmG1IFbn.diag
2025-05-29 13:58:25 (4852): Guest Log: -rw-r--r--. 1 atlas atlas      8574 May 29 20:58 runtime_log.err
2025-05-29 13:58:25 (4852): Guest Log: Looking for outputfile HITS.44871837._092161.pool.root.1
2025-05-29 13:58:25 (4852): Guest Log: HITS file was successfully produced
2025-05-29 13:58:25 (4852): Guest Log: -rw-------. 1 atlas atlas 196716853 May 29 20:56 /home/atlas/RunAtlas/HITS.44871837._092161.pool.root.1
2025-05-29 13:58:27 (4852): Guest Log: Successfully finished the ATLAS job!
2025-05-29 13:58:27 (4852): Guest Log: Copying the results back to the shared directory!
2025-05-29 13:58:28 (4852): Guest Log:  *** Contents of shared directory: ***
2025-05-29 13:58:28 (4852): Guest Log: total 413312
2025-05-29 13:58:28 (4852): Guest Log: -rwxrwxrwx. 1 root root 221191661 May 29 06:46 ATLAS.root_0
2025-05-29 13:58:28 (4852): Guest Log: -rwxrwxrwx. 1 root root 196716853 May 29 20:58 HITS.pool.root.1
2025-05-29 13:58:28 (4852): Guest Log: -rwxrwxrwx. 1 root root      7738 May 29 06:46 init_data.xml
2025-05-29 13:58:28 (4852): Guest Log: -rwxrwxrwx. 1 root root    508877 May 29 06:40 input.tar.gz
2025-05-29 13:58:28 (4852): Guest Log: -rwxrwxrwx. 1 root root   4782080 May 29 20:58 result.tar.gz
2025-05-29 13:58:28 (4852): Guest Log: -rwxrwxrwx. 1 root root     15093 May 29 06:40 start_atlas.sh
2025-05-29 13:58:28 (4852): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-29 13:58:29 (4852): VM Completion File Detected.
2025-05-29 13:58:29 (4852): Powering off VM.
2025-05-29 13:58:31 (4852): Successfully stopped VM.
2025-05-29 13:58:31 (4852): Deregistering VM. (boinc_6ec6d38f576168f2, slot#8)
2025-05-29 13:58:31 (4852): Removing network bandwidth throttle group from VM.
2025-05-29 13:58:31 (4852): Removing VM from VirtualBox.
13:58:37 (4852): called boinc_finish(0)

</stderr_txt>
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