Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
12:43:03 (914167): wrapper (7.7.26015): starting
12:43:03 (914167): wrapper: running run_atlas (--nthreads 12)
[2025-05-30 12:43:03] Arguments: --nthreads 12
[2025-05-30 12:43:03] Threads: 12
[2025-05-30 12:43:03] Checking for CVMFS
[2025-05-30 12:43:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 12:43:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 12:43:03] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 12:43:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 12:43:04] 2.12.7.0 110200 8938 44892 146599 0 59 3824817 4096001 1002 130560 0 13640590 99.994 2180980 1031 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-05-30 12:43:04] CVMFS is ok
[2025-05-30 12:43:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 12:43:04] Checking for apptainer binary...
[2025-05-30 12:43:04] apptainer is not installed, using version from CVMFS
[2025-05-30 12:43:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 12:43:04] ryzen4700s
[2025-05-30 12:43:04] apptainer works
[2025-05-30 12:43:04] Set ATHENA_PROC_NUMBER=12
[2025-05-30 12:43:04] Set ATHENA_CORE_NUMBER=12
[2025-05-30 12:43:04] Starting ATLAS job with PandaID=6668990199
[2025-05-30 12:43:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 15:11:31]  *** The last 200 lines of the pilot log: ***
[2025-05-30 15:11:31] 2025-05-30 15:11:15,069 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-30 15:11:31] 2025-05-30 15:11:15,069 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6668990199/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 15:11:31] 2025-05-30 15:11:15,070 | INFO     | extracted standard info from prmon json
[2025-05-30 15:11:31] 2025-05-30 15:11:15,070 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 15:11:31] 2025-05-30 15:11:15,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 15:11:31] 2025-05-30 15:11:15,268 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 15:11:31] 2025-05-30 15:11:15,268 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 15:11:31] 2025-05-30 15:11:15,270 | INFO     | fitting pss+swap vs Time
[2025-05-30 15:11:31] 2025-05-30 15:11:15,271 | INFO     | sum of square deviations: 945272839.9724153
[2025-05-30 15:11:31] 2025-05-30 15:11:15,271 | INFO     | sum of deviations: 10512099760.496546
[2025-05-30 15:11:31] 2025-05-30 15:11:15,272 | INFO     | mean x: 1748613416.013793
[2025-05-30 15:11:31] 2025-05-30 15:11:15,272 | INFO     | mean y: 2646986.751724138
[2025-05-30 15:11:31] 2025-05-30 15:11:15,272 | INFO     | -- intersect: -19443165792.77979
[2025-05-30 15:11:31] 2025-05-30 15:11:15,272 | INFO     | intersect: -19443165792.77979
[2025-05-30 15:11:31] 2025-05-30 15:11:15,272 | INFO     | chi2: 2.7032457329523902
[2025-05-30 15:11:31] 2025-05-30 15:11:15,272 | INFO     | sum of square deviations: 850815864.9714288
[2025-05-30 15:11:31] 2025-05-30 15:11:15,273 | INFO     | sum of deviations: 20123806943.028557
[2025-05-30 15:11:31] 2025-05-30 15:11:15,273 | INFO     | mean x: 1748613263.5142858
[2025-05-30 15:11:31] 2025-05-30 15:11:15,273 | INFO     | mean y: 2662047.4857142856
[2025-05-30 15:11:31] 2025-05-30 15:11:15,273 | INFO     | -- intersect: -41356176194.39671
[2025-05-30 15:11:31] 2025-05-30 15:11:15,273 | INFO     | intersect: -41356176194.39671
[2025-05-30 15:11:31] 2025-05-30 15:11:15,274 | INFO     | chi2: 1.951466654937526
[2025-05-30 15:11:31] 2025-05-30 15:11:15,274 | INFO     | current chi2=1.951466654937526 (change=27.810238220326255 %)
[2025-05-30 15:11:31] 2025-05-30 15:11:15,274 | INFO     | sum of square deviations: 762870639.9703685
[2025-05-30 15:11:31] 2025-05-30 15:11:15,274 | INFO     | sum of deviations: 19479263049.288883
[2025-05-30 15:11:31] 2025-05-30 15:11:15,275 | INFO     | mean x: 1748613111.0148149
[2025-05-30 15:11:31] 2025-05-30 15:11:15,275 | INFO     | mean y: 2660929.355555556
[2025-05-30 15:11:31] 2025-05-30 15:11:15,275 | INFO     | -- intersect: -44646710767.81186
[2025-05-30 15:11:31] 2025-05-30 15:11:15,275 | INFO     | intersect: -44646710767.81186
[2025-05-30 15:11:31] 2025-05-30 15:11:15,275 | INFO     | chi2: 1.9546872965099522
[2025-05-30 15:11:31] 2025-05-30 15:11:15,275 | INFO     | current chi2=1.9546872965099522 (change=-0.1650369768951754 %)
[2025-05-30 15:11:31] 2025-05-30 15:11:15,275 | INFO     | right removable region: 134
[2025-05-30 15:11:31] 2025-05-30 15:11:15,276 | INFO     | sum of square deviations: 850814644.9714288
[2025-05-30 15:11:31] 2025-05-30 15:11:15,276 | INFO     | sum of deviations: -19172426495.914284
[2025-05-30 15:11:31] 2025-05-30 15:11:15,276 | INFO     | mean x: 1748613568.5142858
[2025-05-30 15:11:31] 2025-05-30 15:11:15,276 | INFO     | mean y: 2694367.7071428574
[2025-05-30 15:11:31] 2025-05-30 15:11:15,277 | INFO     | -- intersect: 39406300441.30069
[2025-05-30 15:11:31] 2025-05-30 15:11:15,277 | INFO     | intersect: 39406300441.30069
[2025-05-30 15:11:31] 2025-05-30 15:11:15,277 | INFO     | chi2: 0.8544274440388611
[2025-05-30 15:11:31] 2025-05-30 15:11:15,277 | INFO     | current chi2=0.8544274440388611 (change=68.392535180082 %)
[2025-05-30 15:11:31] 2025-05-30 15:11:15,277 | INFO     | sum of square deviations: 762868199.9703685
[2025-05-30 15:11:31] 2025-05-30 15:11:15,278 | INFO     | sum of deviations: -19292683965.844444
[2025-05-30 15:11:31] 2025-05-30 15:11:15,278 | INFO     | mean x: 1748613721.0148149
[2025-05-30 15:11:31] 2025-05-30 15:11:15,278 | INFO     | mean y: 2694472.422222222
[2025-05-30 15:11:31] 2025-05-30 15:11:15,278 | INFO     | -- intersect: 44224555993.4405
[2025-05-30 15:11:31] 2025-05-30 15:11:15,278 | INFO     | intersect: 44224555993.4405
[2025-05-30 15:11:31] 2025-05-30 15:11:15,278 | INFO     | chi2: 0.8314440485411982
[2025-05-30 15:11:31] 2025-05-30 15:11:15,278 | INFO     | current chi2=0.8314440485411982 (change=2.689917752292784 %)
[2025-05-30 15:11:31] 2025-05-30 15:11:15,279 | INFO     | left removable region: 20
[2025-05-30 15:11:31] 2025-05-30 15:11:15,279 | INFO     | sum of square deviations: 459355654.4649136
[2025-05-30 15:11:31] 2025-05-30 15:11:15,279 | INFO     | sum of deviations: -4127494396.5
[2025-05-30 15:11:31] 2025-05-30 15:11:15,279 | INFO     | mean x: 1748613690.5175438
[2025-05-30 15:11:31] 2025-05-30 15:11:15,279 | INFO     | mean y: 2702476.5
[2025-05-30 15:11:31] 2025-05-30 15:11:15,280 | INFO     | -- intersect: 15714696307.645111
[2025-05-30 15:11:31] 2025-05-30 15:11:15,280 | INFO     | intersect: 15714696307.645111
[2025-05-30 15:11:31] 2025-05-30 15:11:15,280 | INFO     | chi2: 0.02934274948813179
[2025-05-30 15:11:31] 2025-05-30 15:11:15,280 | INFO     | -- intersect: 15714696307.645111
[2025-05-30 15:11:31] 2025-05-30 15:11:15,280 | INFO     | current memory leak: -8.99 B/s (using 114 data points, chi2=0.03)
[2025-05-30 15:11:31] 2025-05-30 15:11:15,281 | INFO     | ..............................
[2025-05-30 15:11:31] 2025-05-30 15:11:15,281 | INFO     | . Timing measurements:
[2025-05-30 15:11:31] 2025-05-30 15:11:15,281 | INFO     | . get job = 0 s
[2025-05-30 15:11:31] 2025-05-30 15:11:15,281 | INFO     | . initial setup = 1 s
[2025-05-30 15:11:31] 2025-05-30 15:11:15,281 | INFO     | . payload setup = 8 s
[2025-05-30 15:11:31] 2025-05-30 15:11:15,281 | INFO     | . stage-in = 0 s
[2025-05-30 15:11:31] 2025-05-30 15:11:15,281 | INFO     | . payload execution = 8831 s
[2025-05-30 15:11:31] 2025-05-30 15:11:15,281 | INFO     | . stage-out = 10 s
[2025-05-30 15:11:31] 2025-05-30 15:11:15,281 | INFO     | . log creation = 3 s
[2025-05-30 15:11:31] 2025-05-30 15:11:15,281 | INFO     | ..............................
[2025-05-30 15:11:31] 2025-05-30 15:11:15,361 | INFO     | 
[2025-05-30 15:11:31] 2025-05-30 15:11:15,370 | INFO     | job summary report
[2025-05-30 15:11:31] 2025-05-30 15:11:15,370 | INFO     | --------------------------------------------------
[2025-05-30 15:11:31] 2025-05-30 15:11:15,370 | INFO     | PanDA job id: 6668990199
[2025-05-30 15:11:31] 2025-05-30 15:11:15,371 | INFO     | task id: 44871837
[2025-05-30 15:11:31] 2025-05-30 15:11:15,371 | INFO     | errors: (none)
[2025-05-30 15:11:31] 2025-05-30 15:11:15,371 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 15:11:31] 2025-05-30 15:11:15,371 | INFO     | pilot state: finished 
[2025-05-30 15:11:31] 2025-05-30 15:11:15,371 | INFO     | transexitcode: 0
[2025-05-30 15:11:31] 2025-05-30 15:11:15,371 | INFO     | exeerrorcode: 0
[2025-05-30 15:11:31] 2025-05-30 15:11:15,371 | INFO     | exeerrordiag: 
[2025-05-30 15:11:31] 2025-05-30 15:11:15,371 | INFO     | exitcode: 0
[2025-05-30 15:11:31] 2025-05-30 15:11:15,371 | INFO     | exitmsg: OK
[2025-05-30 15:11:31] 2025-05-30 15:11:15,371 | INFO     | cpuconsumptiontime: 47704 s
[2025-05-30 15:11:31] 2025-05-30 15:11:15,371 | INFO     | nevents: 400
[2025-05-30 15:11:31] 2025-05-30 15:11:15,371 | INFO     | neventsw: 0
[2025-05-30 15:11:31] 2025-05-30 15:11:15,371 | INFO     | pid: 935424
[2025-05-30 15:11:31] 2025-05-30 15:11:15,371 | INFO     | pgrp: 935424
[2025-05-30 15:11:31] 2025-05-30 15:11:15,371 | INFO     | corecount: 12
[2025-05-30 15:11:31] 2025-05-30 15:11:15,372 | INFO     | event service: False
[2025-05-30 15:11:31] 2025-05-30 15:11:15,372 | INFO     | sizes: {0: 2405257, 5: 2405463, 11: 2405519, 8847: 2433349, 8858: 2442336, 8859: 2442392, 8866: 2442690}
[2025-05-30 15:11:31] 2025-05-30 15:11:15,372 | INFO     | --------------------------------------------------
[2025-05-30 15:11:31] 2025-05-30 15:11:15,372 | INFO     | 
[2025-05-30 15:11:31] 2025-05-30 15:11:15,372 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-05-30 15:11:31] 2025-05-30 15:11:15,392 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 15:11:31] 2025-05-30 15:11:15,392 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 15:11:31] 2025-05-30 15:11:15,392 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 15:11:31] 2025-05-30 15:11:15,392 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 15:11:31] 2025-05-30 15:11:15,392 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 15:11:31] 2025-05-30 15:11:15,392 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 15:11:31] 2025-05-30 15:11:15,392 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 15:11:31] 2025-05-30 15:11:15,392 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 15:11:31] 2025-05-30 15:11:15,392 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 15:11:31] 2025-05-30 15:11:15,392 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 15:11:31] 2025-05-30 15:11:15,393 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 15:11:31] 2025-05-30 15:11:15,393 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 15:11:31] 2025-05-30 15:11:15,393 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 15:11:31] 2025-05-30 15:11:15,393 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 15:11:31] 2025-05-30 15:11:15,393 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 15:11:31] 2025-05-30 15:11:15,393 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 15:11:31] 2025-05-30 15:11:15,393 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 15:11:31] 2025-05-30 15:11:15,393 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 15:11:31] 2025-05-30 15:11:15,393 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 15:11:31] 2025-05-30 15:11:15,393 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 15:11:31] 2025-05-30 15:11:15,393 | INFO     | job 6668990199 has completed (purged errors)
[2025-05-30 15:11:31] 2025-05-30 15:11:15,393 | INFO     | overall cleanup function is called
[2025-05-30 15:11:31] 2025-05-30 15:11:16,399 | INFO     | --- collectZombieJob: --- 10, [935424]
[2025-05-30 15:11:31] 2025-05-30 15:11:16,399 | INFO     | zombie collector waiting for pid 935424
[2025-05-30 15:11:31] 2025-05-30 15:11:16,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 15:11:31] 2025-05-30 15:11:16,399 | INFO     | collected zombie processes
[2025-05-30 15:11:31] 2025-05-30 15:11:16,399 | INFO     | will attempt to kill all subprocesses of pid=935424
[2025-05-30 15:11:31] 2025-05-30 15:11:16,512 | INFO     | process IDs to be killed: [935424] (in reverse order)
[2025-05-30 15:11:31] 2025-05-30 15:11:16,556 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 15:11:31] 2025-05-30 15:11:16,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 15:11:31] 2025-05-30 15:11:16,560 | INFO     | did not find any defunct processes belonging to 935424
[2025-05-30 15:11:31] 2025-05-30 15:11:16,563 | INFO     | did not find any defunct processes belonging to 935424
[2025-05-30 15:11:31] 2025-05-30 15:11:16,563 | INFO     | ready for new job
[2025-05-30 15:11:31] 2025-05-30 15:11:16,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 15:11:31] 2025-05-30 15:11:16,565 | INFO     | **************************************
[2025-05-30 15:11:31] 2025-05-30 15:11:16,565 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 15:11:31] 2025-05-30 15:11:16,565 | INFO     | **************************************
[2025-05-30 15:11:31] 2025-05-30 15:11:16,565 | INFO     | 
[2025-05-30 15:11:31] 2025-05-30 15:11:16,584 | INFO     | architecture information:
[2025-05-30 15:11:31] 2025-05-30 15:11:16,584 | INFO     | executing command: cat /etc/os-release
[2025-05-30 15:11:31] 2025-05-30 15:11:16,600 | INFO     | cat /etc/os-release:
[2025-05-30 15:11:31] NAME="CentOS Linux"
[2025-05-30 15:11:31] VERSION="7 (Core)"
[2025-05-30 15:11:31] ID="centos"
[2025-05-30 15:11:31] ID_LIKE="rhel fedora"
[2025-05-30 15:11:31] VERSION_ID="7"
[2025-05-30 15:11:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 15:11:31] ANSI_COLOR="0;31"
[2025-05-30 15:11:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 15:11:31] HOME_URL="https://www.centos.org/"
[2025-05-30 15:11:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 15:11:31] 
[2025-05-30 15:11:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 15:11:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 15:11:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 15:11:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 15:11:31] 
[2025-05-30 15:11:31] 2025-05-30 15:11:16,600 | INFO     | **************************************
[2025-05-30 15:11:31] 2025-05-30 15:11:17,103 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-05-30 15:11:31] 2025-05-30 15:11:17,121 | INFO     | sufficient remaining disk space (116716994560 B)
[2025-05-30 15:11:31] 2025-05-30 15:11:17,121 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 15:11:31] 2025-05-30 15:11:17,121 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 15:11:31] 2025-05-30 15:11:17,121 | INFO     | update_server=False
[2025-05-30 15:11:31] 2025-05-30 15:11:17,122 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 15:11:31] 2025-05-30 15:11:17,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 15:11:31] 2025-05-30 15:11:17,272 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 15:11:31] 2025-05-30 15:11:17,272 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 15:11:31] 2025-05-30 15:11:17,272 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 15:11:31] 2025-05-30 15:11:17,679 | INFO     | all payload control threads have been joined
[2025-05-30 15:11:31] 2025-05-30 15:11:17,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 15:11:31] 2025-05-30 15:11:17,975 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 15:11:31] 2025-05-30 15:11:17,975 | INFO     | aborting loop
[2025-05-30 15:11:31] 2025-05-30 15:11:18,123 | INFO     | [job] retrieve thread has finished
[2025-05-30 15:11:31] 2025-05-30 15:11:18,127 | INFO     | [job] queue monitor thread has finished
[2025-05-30 15:11:31] 2025-05-30 15:11:18,179 | INFO     | all data control threads have been joined
[2025-05-30 15:11:31] 2025-05-30 15:11:18,295 | INFO     | all job control threads have been joined
[2025-05-30 15:11:31] 2025-05-30 15:11:18,475 | INFO     | [job] validate thread has finished
[2025-05-30 15:11:31] 2025-05-30 15:11:18,489 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 15:11:31] 2025-05-30 15:11:18,490 | INFO     | [data] copytool_in thread has finished
[2025-05-30 15:11:31] 2025-05-30 15:11:18,683 | INFO     | [payload] control thread has finished
[2025-05-30 15:11:31] 2025-05-30 15:11:18,979 | INFO     | [job] job monitor thread has finished
[2025-05-30 15:11:31] 2025-05-30 15:11:19,034 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 15:11:31] 2025-05-30 15:11:19,183 | INFO     | [data] control thread has finished
[2025-05-30 15:11:31] 2025-05-30 15:11:19,299 | INFO     | [job] control thread has finished
[2025-05-30 15:11:31] 2025-05-30 15:11:19,479 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 15:11:31] 2025-05-30 15:11:19,495 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 15:11:31] 2025-05-30 15:11:19,496 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 15:11:31] 2025-05-30 15:11:19,579 | INFO     | [payload] failed_post thread has finished
[2025-05-30 15:11:31] 2025-05-30 15:11:19,579 | INFO     | [payload] validate_post thread has finished
[2025-05-30 15:11:31] 2025-05-30 15:11:19,967 | INFO     | [data] copytool_out thread has finished
[2025-05-30 15:11:31] 2025-05-30 15:11:23,039 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 15:11:31] 2025-05-30 15:11:24,027 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140445921236800)>', '<ExcThread(monitor, started 140445329897216)>']
[2025-05-30 15:11:31] 2025-05-30 15:11:24,299 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 15:11:31] 2025-05-30 15:11:24,299 | INFO     | [monitor] control thread has ended
[2025-05-30 15:11:31] 2025-05-30 15:11:29,051 | INFO     | all workflow threads have been joined
[2025-05-30 15:11:31] 2025-05-30 15:11:29,051 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 15:11:31] 2025-05-30 15:11:29,051 | INFO     | traces error code: 0
[2025-05-30 15:11:31] 2025-05-30 15:11:29,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 15:11:31] 2025-05-30 15:11:30,258 [wrapper] ==== pilot stdout END ====
[2025-05-30 15:11:31] 2025-05-30 15:11:30,280 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 15:11:31] 2025-05-30 15:11:30,284 [wrapper] pilotpid: 919950
[2025-05-30 15:11:31] 2025-05-30 15:11:30,287 [wrapper] Pilot exit status: 0
[2025-05-30 15:11:31] 2025-05-30 15:11:30,480 [wrapper] pandaids: 6668990199
[2025-05-30 15:11:31] 2025-05-30 15:11:30,522 [wrapper] cleanup supervisor_pilot  986738 919951
[2025-05-30 15:11:31] 2025-05-30 15:11:30,525 [wrapper] Test setup, not cleaning
[2025-05-30 15:11:31] 2025-05-30 15:11:30,554 [wrapper] apfmon messages muted
[2025-05-30 15:11:31] 2025-05-30 15:11:30,557 [wrapper] ==== wrapper stdout END ====
[2025-05-30 15:11:31] 2025-05-30 15:11:30,560 [wrapper] ==== wrapper stderr END ====
[2025-05-30 15:11:31]  *** Error codes and diagnostics ***
[2025-05-30 15:11:31]     "exeErrorCode": 0,
[2025-05-30 15:11:31]     "exeErrorDiag": "",
[2025-05-30 15:11:31]     "pilotErrorCode": 0,
[2025-05-30 15:11:31]     "pilotErrorDiag": "",
[2025-05-30 15:11:31]  *** Listing of results directory ***
[2025-05-30 15:11:31] total 419592
[2025-05-30 15:11:31] -rw-r--r-- 1 boinc boinc    495897 May 28 23:19 pilot3.tar.gz
[2025-05-30 15:11:31] -rwx------ 1 boinc boinc     37140 May 28 23:29 runpilot2-wrapper.sh
[2025-05-30 15:11:31] -rw-r--r-- 1 boinc boinc      5111 May 28 23:29 queuedata.json
[2025-05-30 15:11:31] -rw-rw-r-- 1 boinc boinc       100 May 30 12:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 15:11:31] -rwxr-xr-x 1 boinc boinc      7986 May 30 12:43 run_atlas
[2025-05-30 15:11:31] -rw-rw-r-- 1 boinc boinc       105 May 30 12:43 job.xml
[2025-05-30 15:11:31] -rw-rw-r-- 1 boinc boinc      9446 May 30 12:43 init_data.xml
[2025-05-30 15:11:31] -rw-r--r-- 2 boinc boinc 226920705 May 30 12:43 EVNT.44871834._003575.pool.root.1
[2025-05-30 15:11:31] drwxrwx--x 2 boinc boinc      4096 May 30 12:43 shared
[2025-05-30 15:11:31] -rw-r--r-- 2 boinc boinc    508875 May 30 12:43 input.tar.gz
[2025-05-30 15:11:31] -rw-r--r-- 2 boinc boinc     15093 May 30 12:43 start_atlas.sh
[2025-05-30 15:11:31] -rw-rw-r-- 1 boinc boinc         0 May 30 12:43 boinc_lockfile
[2025-05-30 15:11:31] -rw-rw-r-- 1 boinc boinc      2559 May 30 12:43 pandaJob.out
[2025-05-30 15:11:31] -rw------- 1 boinc boinc    987998 May 30 12:43 agis_schedconf.cvmfs.json
[2025-05-30 15:11:31] -rw------- 1 boinc boinc   1603667 May 30 12:43 agis_ddmendpoints.agis.ALL.json
[2025-05-30 15:11:31] drwx------ 4 boinc boinc      4096 May 30 12:43 pilot3
[2025-05-30 15:11:31] -rw------- 1 boinc boinc 196370611 May 30 15:08 HITS.44871837._091931.pool.root.1
[2025-05-30 15:11:31] -rw-rw-r-- 1 boinc boinc       529 May 30 15:09 boinc_task_state.xml
[2025-05-30 15:11:31] -rw------- 1 boinc boinc      1041 May 30 15:10 memory_monitor_summary.json
[2025-05-30 15:11:31] -rw------- 1 boinc boinc    411178 May 30 15:11 log.44871837._091931.job.log.tgz.1
[2025-05-30 15:11:31] -rw------- 1 boinc boinc      7712 May 30 15:11 heartbeat.json
[2025-05-30 15:11:31] -rw------- 1 boinc boinc        95 May 30 15:11 pilot_heartbeat.json
[2025-05-30 15:11:31] -rw------- 1 boinc boinc      4377 May 30 15:11 pilotlog.txt
[2025-05-30 15:11:31] -rw-rw-r-- 1 boinc boinc      8192 May 30 15:11 boinc_mmap_file
[2025-05-30 15:11:31] -rw-rw-r-- 1 boinc boinc        27 May 30 15:11 wrapper_checkpoint.txt
[2025-05-30 15:11:31] -rw------- 1 boinc boinc    848955 May 30 15:11 log.44871837._091931.job.log.1
[2025-05-30 15:11:31] -rw------- 1 boinc boinc       357 May 30 15:11 output.list
[2025-05-30 15:11:31] -rw-rw-r-- 1 boinc boinc       620 May 30 15:11 runtime_log
[2025-05-30 15:11:31] -rw------- 1 boinc boinc   1280000 May 30 15:11 result.tar.gz
[2025-05-30 15:11:31] -rw-rw-r-- 1 boinc boinc      8973 May 30 15:11 runtime_log.err
[2025-05-30 15:11:31] -rw------- 1 boinc boinc       660 May 30 15:11 nSXLDmROfe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpIdKDmHKdXzn.diag
[2025-05-30 15:11:31] -rw-rw-r-- 1 boinc boinc     20650 May 30 15:11 stderr.txt
[2025-05-30 15:11:32] HITS file was successfully produced:
[2025-05-30 15:11:32] -rw------- 1 boinc boinc 196370611 May 30 15:08 shared/HITS.pool.root.1
[2025-05-30 15:11:32]  *** Contents of shared directory: ***
[2025-05-30 15:11:32] total 415152
[2025-05-30 15:11:32] -rw-r--r-- 2 boinc boinc 226920705 May 30 12:43 ATLAS.root_0
[2025-05-30 15:11:32] -rw-r--r-- 2 boinc boinc    508875 May 30 12:43 input.tar.gz
[2025-05-30 15:11:32] -rw-r--r-- 2 boinc boinc     15093 May 30 12:43 start_atlas.sh
[2025-05-30 15:11:32] -rw------- 1 boinc boinc 196370611 May 30 15:08 HITS.pool.root.1
[2025-05-30 15:11:32] -rw------- 1 boinc boinc   1280000 May 30 15:11 result.tar.gz
15:11:33 (914167): run_atlas exited; CPU time 47731.664685
15:11:33 (914167): called boinc_finish(0)

</stderr_txt>
]]>

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