Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
14:05:48 (958664): wrapper (7.7.26015): starting
14:05:48 (958664): wrapper: running run_atlas (--nthreads 12)
[2025-05-30 14:05:48] Arguments: --nthreads 12
[2025-05-30 14:05:48] Threads: 12
[2025-05-30 14:05:48] Checking for CVMFS
[2025-05-30 14:05:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-30 14:05:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-30 14:05:50] Running cvmfs_config stat atlas.cern.ch
[2025-05-30 14:05:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-30 14:05:52] 2.12.7.0 110200 9021 45228 146600 1 56 3849578 4096001 1824 130560 0 13765879 99.994 2182284 1031 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-05-30 14:05:52] CVMFS is ok
[2025-05-30 14:05:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-30 14:05:52] Checking for apptainer binary...
[2025-05-30 14:05:52] apptainer is not installed, using version from CVMFS
[2025-05-30 14:05:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-30 14:05:56] ryzen4700s
[2025-05-30 14:05:56] apptainer works
[2025-05-30 14:05:56] Set ATHENA_PROC_NUMBER=12
[2025-05-30 14:05:56] Set ATHENA_CORE_NUMBER=12
[2025-05-30 14:05:56] Starting ATLAS job with PandaID=6668990429
[2025-05-30 14:05:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 16:42:35]  *** The last 200 lines of the pilot log: ***
[2025-05-30 16:42:35] 2025-05-30 16:42:05,590 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-30 16:42:35] 2025-05-30 16:42:08,099 | INFO     | monitor loop #717: job 0:6668990429 is in state 'finished'
[2025-05-30 16:42:35] 2025-05-30 16:42:08,099 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-30 16:42:35] 2025-05-30 16:42:09,239 | INFO     | PID=962336 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-05-30 16:42:35] 2025-05-30 16:42:09,239 | INFO     | .. there are 3 such processes running
[2025-05-30 16:42:35] 2025-05-30 16:42:10,611 | INFO     | monitor loop #718: job 0:6668990429 is in state 'finished'
[2025-05-30 16:42:35] 2025-05-30 16:42:10,611 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-05-30 16:42:35] 2025-05-30 16:42:10,836 | INFO     | CPU arch script returned: x86-64-v3
[2025-05-30 16:42:35] 2025-05-30 16:42:10,836 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6668990429/memory_monitor_summary.json (trf name=prmon)
[2025-05-30 16:42:35] 2025-05-30 16:42:10,837 | INFO     | extracted standard info from prmon json
[2025-05-30 16:42:35] 2025-05-30 16:42:10,837 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 16:42:35] 2025-05-30 16:42:10,837 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 16:42:35] 2025-05-30 16:42:10,837 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 16:42:35] 2025-05-30 16:42:10,838 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 16:42:35] 2025-05-30 16:42:10,840 | INFO     | fitting pss+swap vs Time
[2025-05-30 16:42:35] 2025-05-30 16:42:10,841 | INFO     | sum of square deviations: 1005179777.0
[2025-05-30 16:42:35] 2025-05-30 16:42:10,841 | INFO     | sum of deviations: 28979168434.999992
[2025-05-30 16:42:35] 2025-05-30 16:42:10,842 | INFO     | mean x: 1748618762.5
[2025-05-30 16:42:35] 2025-05-30 16:42:10,842 | INFO     | mean y: 2604457.756756757
[2025-05-30 16:42:35] 2025-05-30 16:42:10,842 | INFO     | -- intersect: -50409788237.13602
[2025-05-30 16:42:35] 2025-05-30 16:42:10,842 | INFO     | intersect: -50409788237.13602
[2025-05-30 16:42:35] 2025-05-30 16:42:10,842 | INFO     | chi2: 5.8876176812563
[2025-05-30 16:42:35] 2025-05-30 16:42:10,842 | INFO     | sum of square deviations: 906703512.0
[2025-05-30 16:42:35] 2025-05-30 16:42:10,847 | INFO     | sum of deviations: 47307503971.99999
[2025-05-30 16:42:35] 2025-05-30 16:42:10,848 | INFO     | mean x: 1748618610.0
[2025-05-30 16:42:35] 2025-05-30 16:42:10,848 | INFO     | mean y: 2632171.7342657344
[2025-05-30 16:42:35] 2025-05-30 16:42:10,848 | INFO     | -- intersect: -91232022534.3215
[2025-05-30 16:42:35] 2025-05-30 16:42:10,848 | INFO     | intersect: -91232022534.3215
[2025-05-30 16:42:35] 2025-05-30 16:42:10,848 | INFO     | chi2: 4.4421240034279785
[2025-05-30 16:42:35] 2025-05-30 16:42:10,848 | INFO     | current chi2=4.4421240034279785 (change=24.551418860469926 %)
[2025-05-30 16:42:35] 2025-05-30 16:42:10,848 | INFO     | right removable region: 142
[2025-05-30 16:42:35] 2025-05-30 16:42:10,849 | INFO     | sum of square deviations: 906703512.0
[2025-05-30 16:42:35] 2025-05-30 16:42:10,849 | INFO     | sum of deviations: -19673313496.0
[2025-05-30 16:42:35] 2025-05-30 16:42:10,849 | INFO     | mean x: 1748618915.0
[2025-05-30 16:42:35] 2025-05-30 16:42:10,850 | INFO     | mean y: 2679590.104895105
[2025-05-30 16:42:35] 2025-05-30 16:42:10,850 | INFO     | -- intersect: 37943558438.085335
[2025-05-30 16:42:35] 2025-05-30 16:42:10,850 | INFO     | intersect: 37943558438.085335
[2025-05-30 16:42:35] 2025-05-30 16:42:10,850 | INFO     | chi2: 2.047765120944809
[2025-05-30 16:42:35] 2025-05-30 16:42:10,850 | INFO     | current chi2=2.047765120944809 (change=65.21912203192079 %)
[2025-05-30 16:42:35] 2025-05-30 16:42:10,850 | INFO     | sum of square deviations: 814878534.5
[2025-05-30 16:42:35] 2025-05-30 16:42:10,855 | INFO     | sum of deviations: -34096316793.0
[2025-05-30 16:42:35] 2025-05-30 16:42:10,855 | INFO     | mean x: 1748619067.5
[2025-05-30 16:42:35] 2025-05-30 16:42:10,855 | INFO     | mean y: 2703403.4057971016
[2025-05-30 16:42:35] 2025-05-30 16:42:10,855 | INFO     | -- intersect: 73168785404.0113
[2025-05-30 16:42:35] 2025-05-30 16:42:10,855 | INFO     | intersect: 73168785404.0113
[2025-05-30 16:42:35] 2025-05-30 16:42:10,856 | INFO     | chi2: 1.6525416006037266
[2025-05-30 16:42:35] 2025-05-30 16:42:10,856 | INFO     | current chi2=1.6525416006037266 (change=19.300236941174774 %)
[2025-05-30 16:42:35] 2025-05-30 16:42:10,856 | INFO     | left removable region: 20
[2025-05-30 16:42:35] 2025-05-30 16:42:10,856 | INFO     | sum of square deviations: 563026370.5
[2025-05-30 16:42:35] 2025-05-30 16:42:10,857 | INFO     | sum of deviations: -15430684531.499998
[2025-05-30 16:42:35] 2025-05-30 16:42:10,857 | INFO     | mean x: 1748619189.5
[2025-05-30 16:42:35] 2025-05-30 16:42:10,857 | INFO     | mean y: 2738422.581967213
[2025-05-30 16:42:35] 2025-05-30 16:42:10,857 | INFO     | -- intersect: 47926587983.90854
[2025-05-30 16:42:35] 2025-05-30 16:42:10,857 | INFO     | intersect: 47926587983.90854
[2025-05-30 16:42:35] 2025-05-30 16:42:10,857 | INFO     | chi2: 0.029554436114676164
[2025-05-30 16:42:35] 2025-05-30 16:42:10,857 | INFO     | -- intersect: 47926587983.90854
[2025-05-30 16:42:35] 2025-05-30 16:42:10,857 | INFO     | current memory leak: -27.41 B/s (using 122 data points, chi2=0.03)
[2025-05-30 16:42:35] 2025-05-30 16:42:10,858 | INFO     | ..............................
[2025-05-30 16:42:35] 2025-05-30 16:42:10,858 | INFO     | . Timing measurements:
[2025-05-30 16:42:35] 2025-05-30 16:42:10,858 | INFO     | . get job = 0 s
[2025-05-30 16:42:35] 2025-05-30 16:42:10,858 | INFO     | . initial setup = 6 s
[2025-05-30 16:42:35] 2025-05-30 16:42:10,858 | INFO     | . payload setup = 85 s
[2025-05-30 16:42:35] 2025-05-30 16:42:10,858 | INFO     | . stage-in = 0 s
[2025-05-30 16:42:35] 2025-05-30 16:42:10,858 | INFO     | . payload execution = 9026 s
[2025-05-30 16:42:35] 2025-05-30 16:42:10,858 | INFO     | . stage-out = 3 s
[2025-05-30 16:42:35] 2025-05-30 16:42:10,858 | INFO     | . log creation = 0 s
[2025-05-30 16:42:35] 2025-05-30 16:42:10,858 | INFO     | ..............................
[2025-05-30 16:42:35] 2025-05-30 16:42:11,039 | INFO     | 
[2025-05-30 16:42:35] 2025-05-30 16:42:11,039 | INFO     | job summary report
[2025-05-30 16:42:35] 2025-05-30 16:42:11,039 | INFO     | --------------------------------------------------
[2025-05-30 16:42:35] 2025-05-30 16:42:11,039 | INFO     | PanDA job id: 6668990429
[2025-05-30 16:42:35] 2025-05-30 16:42:11,039 | INFO     | task id: 44871837
[2025-05-30 16:42:35] 2025-05-30 16:42:11,040 | INFO     | errors: (none)
[2025-05-30 16:42:35] 2025-05-30 16:42:11,040 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 16:42:35] 2025-05-30 16:42:11,040 | INFO     | pilot state: finished 
[2025-05-30 16:42:35] 2025-05-30 16:42:11,040 | INFO     | transexitcode: 0
[2025-05-30 16:42:35] 2025-05-30 16:42:11,040 | INFO     | exeerrorcode: 0
[2025-05-30 16:42:35] 2025-05-30 16:42:11,040 | INFO     | exeerrordiag: 
[2025-05-30 16:42:35] 2025-05-30 16:42:11,040 | INFO     | exitcode: 0
[2025-05-30 16:42:35] 2025-05-30 16:42:11,040 | INFO     | exitmsg: OK
[2025-05-30 16:42:35] 2025-05-30 16:42:11,040 | INFO     | cpuconsumptiontime: 46452 s
[2025-05-30 16:42:35] 2025-05-30 16:42:11,040 | INFO     | nevents: 400
[2025-05-30 16:42:35] 2025-05-30 16:42:11,040 | INFO     | neventsw: 0
[2025-05-30 16:42:35] 2025-05-30 16:42:11,040 | INFO     | pid: 968922
[2025-05-30 16:42:35] 2025-05-30 16:42:11,040 | INFO     | pgrp: 968922
[2025-05-30 16:42:35] 2025-05-30 16:42:11,040 | INFO     | corecount: 12
[2025-05-30 16:42:35] 2025-05-30 16:42:11,041 | INFO     | event service: False
[2025-05-30 16:42:35] 2025-05-30 16:42:11,041 | INFO     | sizes: {0: 2405086, 1: 2405114, 2: 2405285, 12: 2405313, 23: 2405341, 34: 2405369, 45: 2405525, 47: 2405759, 55: 2405815, 9115: 2433889, 9119: 2442876, 9122: 24432
[2025-05-30 16:42:35] 2025-05-30 16:42:11,041 | INFO     | --------------------------------------------------
[2025-05-30 16:42:35] 2025-05-30 16:42:11,041 | INFO     | 
[2025-05-30 16:42:35] 2025-05-30 16:42:11,041 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-05-30 16:42:35] 2025-05-30 16:42:11,191 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 16:42:35] 2025-05-30 16:42:11,192 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 16:42:35] 2025-05-30 16:42:11,192 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 16:42:35] 2025-05-30 16:42:11,192 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 16:42:35] 2025-05-30 16:42:11,192 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 16:42:35] 2025-05-30 16:42:11,192 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 16:42:35] 2025-05-30 16:42:11,192 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 16:42:35] 2025-05-30 16:42:11,192 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 16:42:35] 2025-05-30 16:42:11,192 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 16:42:35] 2025-05-30 16:42:11,192 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 16:42:35] 2025-05-30 16:42:11,192 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 16:42:35] 2025-05-30 16:42:11,192 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 16:42:35] 2025-05-30 16:42:11,192 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 16:42:35] 2025-05-30 16:42:11,192 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 16:42:35] 2025-05-30 16:42:11,193 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 16:42:35] 2025-05-30 16:42:11,193 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 16:42:35] 2025-05-30 16:42:11,193 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 16:42:35] 2025-05-30 16:42:11,193 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 16:42:35] 2025-05-30 16:42:11,193 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 16:42:35] 2025-05-30 16:42:11,193 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 16:42:35] 2025-05-30 16:42:11,193 | INFO     | job 6668990429 has completed (purged errors)
[2025-05-30 16:42:35] 2025-05-30 16:42:11,193 | INFO     | overall cleanup function is called
[2025-05-30 16:42:35] 2025-05-30 16:42:12,199 | INFO     | --- collectZombieJob: --- 10, [968922]
[2025-05-30 16:42:35] 2025-05-30 16:42:12,199 | INFO     | zombie collector waiting for pid 968922
[2025-05-30 16:42:35] 2025-05-30 16:42:12,199 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 16:42:35] 2025-05-30 16:42:12,199 | INFO     | collected zombie processes
[2025-05-30 16:42:35] 2025-05-30 16:42:12,199 | INFO     | will attempt to kill all subprocesses of pid=968922
[2025-05-30 16:42:35] 2025-05-30 16:42:12,441 | INFO     | process IDs to be killed: [968922] (in reverse order)
[2025-05-30 16:42:35] 2025-05-30 16:42:12,556 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 16:42:35] 2025-05-30 16:42:12,556 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 16:42:35] 2025-05-30 16:42:12,559 | INFO     | did not find any defunct processes belonging to 968922
[2025-05-30 16:42:35] 2025-05-30 16:42:12,562 | INFO     | did not find any defunct processes belonging to 968922
[2025-05-30 16:42:35] 2025-05-30 16:42:12,562 | INFO     | ready for new job
[2025-05-30 16:42:35] 2025-05-30 16:42:12,562 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 16:42:35] 2025-05-30 16:42:12,568 | INFO     | **************************************
[2025-05-30 16:42:35] 2025-05-30 16:42:12,568 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 16:42:35] 2025-05-30 16:42:12,568 | INFO     | **************************************
[2025-05-30 16:42:35] 2025-05-30 16:42:12,569 | INFO     | 
[2025-05-30 16:42:35] 2025-05-30 16:42:12,588 | INFO     | architecture information:
[2025-05-30 16:42:35] 2025-05-30 16:42:12,591 | INFO     | executing command: cat /etc/os-release
[2025-05-30 16:42:35] 2025-05-30 16:42:12,699 | INFO     | cat /etc/os-release:
[2025-05-30 16:42:35] NAME="CentOS Linux"
[2025-05-30 16:42:35] VERSION="7 (Core)"
[2025-05-30 16:42:35] ID="centos"
[2025-05-30 16:42:35] ID_LIKE="rhel fedora"
[2025-05-30 16:42:35] VERSION_ID="7"
[2025-05-30 16:42:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 16:42:35] ANSI_COLOR="0;31"
[2025-05-30 16:42:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 16:42:35] HOME_URL="https://www.centos.org/"
[2025-05-30 16:42:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 16:42:35] 
[2025-05-30 16:42:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 16:42:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 16:42:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 16:42:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 16:42:35] 
[2025-05-30 16:42:35] 2025-05-30 16:42:12,699 | INFO     | **************************************
[2025-05-30 16:42:35] 2025-05-30 16:42:13,207 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-05-30 16:42:35] 2025-05-30 16:42:13,273 | INFO     | sufficient remaining disk space (117042053120 B)
[2025-05-30 16:42:35] 2025-05-30 16:42:13,274 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 16:42:35] 2025-05-30 16:42:13,274 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 16:42:35] 2025-05-30 16:42:13,274 | INFO     | update_server=False
[2025-05-30 16:42:35] 2025-05-30 16:42:13,274 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 16:42:35] 2025-05-30 16:42:13,279 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 16:42:35] 2025-05-30 16:42:13,279 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 16:42:35] 2025-05-30 16:42:13,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 16:42:35] 2025-05-30 16:42:13,371 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 16:42:35] 2025-05-30 16:42:14,127 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 16:42:35] 2025-05-30 16:42:14,127 | INFO     | aborting loop
[2025-05-30 16:42:35] 2025-05-30 16:42:14,130 | INFO     | all data control threads have been joined
[2025-05-30 16:42:35] 2025-05-30 16:42:14,279 | INFO     | [job] retrieve thread has finished
[2025-05-30 16:42:35] 2025-05-30 16:42:14,302 | INFO     | all payload control threads have been joined
[2025-05-30 16:42:35] 2025-05-30 16:42:14,723 | INFO     | all job control threads have been joined
[2025-05-30 16:42:35] 2025-05-30 16:42:14,963 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 16:42:35] 2025-05-30 16:42:15,035 | INFO     | [payload] validate_post thread has finished
[2025-05-30 16:42:35] 2025-05-30 16:42:15,039 | INFO     | [payload] failed_post thread has finished
[2025-05-30 16:42:35] 2025-05-30 16:42:15,131 | INFO     | [job] job monitor thread has finished
[2025-05-30 16:42:35] 2025-05-30 16:42:15,135 | INFO     | [data] control thread has finished
[2025-05-30 16:42:35] 2025-05-30 16:42:15,186 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 16:42:35] 2025-05-30 16:42:15,307 | INFO     | [payload] control thread has finished
[2025-05-30 16:42:35] 2025-05-30 16:42:15,383 | INFO     | [data] copytool_out thread has finished
[2025-05-30 16:42:35] 2025-05-30 16:42:15,383 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 16:42:35] 2025-05-30 16:42:15,384 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 16:42:35] 2025-05-30 16:42:15,395 | INFO     | [job] validate thread has finished
[2025-05-30 16:42:35] 2025-05-30 16:42:15,403 | INFO     | [data] copytool_in thread has finished
[2025-05-30 16:42:35] 2025-05-30 16:42:15,727 | INFO     | [job] control thread has finished
[2025-05-30 16:42:35] 2025-05-30 16:42:16,063 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 16:42:35] 2025-05-30 16:42:17,067 | INFO     | [job] queue monitor thread has finished
[2025-05-30 16:42:35] 2025-05-30 16:42:19,203 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 16:42:35] 2025-05-30 16:42:24,243 | INFO     | job.realtimelogging is not enabled
[2025-05-30 16:42:35] 2025-05-30 16:42:25,255 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 16:42:35] 2025-05-30 16:42:27,087 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140278844483392)>', '<ExcThread(monitor, started 140278178502400)>']
[2025-05-30 16:42:35] 2025-05-30 16:42:27,359 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 16:42:35] 2025-05-30 16:42:27,359 | INFO     | [monitor] control thread has ended
[2025-05-30 16:42:35] 2025-05-30 16:42:32,115 | INFO     | all workflow threads have been joined
[2025-05-30 16:42:35] 2025-05-30 16:42:32,115 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 16:42:35] 2025-05-30 16:42:32,115 | INFO     | traces error code: 0
[2025-05-30 16:42:35] 2025-05-30 16:42:32,116 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 16:42:35] 2025-05-30 16:42:33,111 [wrapper] ==== pilot stdout END ====
[2025-05-30 16:42:35] 2025-05-30 16:42:33,126 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 16:42:35] 2025-05-30 16:42:33,179 [wrapper] pilotpid: 962336
[2025-05-30 16:42:35] 2025-05-30 16:42:33,235 [wrapper] Pilot exit status: 0
[2025-05-30 16:42:35] 2025-05-30 16:42:33,536 [wrapper] pandaids: 6668990429
[2025-05-30 16:42:35] 2025-05-30 16:42:33,743 [wrapper] cleanup supervisor_pilot 1040678 962337
[2025-05-30 16:42:35] 2025-05-30 16:42:33,795 [wrapper] Test setup, not cleaning
[2025-05-30 16:42:35] 2025-05-30 16:42:33,843 [wrapper] apfmon messages muted
[2025-05-30 16:42:35] 2025-05-30 16:42:33,876 [wrapper] ==== wrapper stdout END ====
[2025-05-30 16:42:35] 2025-05-30 16:42:33,908 [wrapper] ==== wrapper stderr END ====
[2025-05-30 16:42:35]  *** Error codes and diagnostics ***
[2025-05-30 16:42:35]     "exeErrorCode": 0,
[2025-05-30 16:42:35]     "exeErrorDiag": "",
[2025-05-30 16:42:35]     "pilotErrorCode": 0,
[2025-05-30 16:42:35]     "pilotErrorDiag": "",
[2025-05-30 16:42:35]  *** Listing of results directory ***
[2025-05-30 16:42:35] total 417740
[2025-05-30 16:42:35] -rw-r--r-- 1 boinc boinc    495897 May 28 23:19 pilot3.tar.gz
[2025-05-30 16:42:35] -rwx------ 1 boinc boinc     37140 May 28 23:54 runpilot2-wrapper.sh
[2025-05-30 16:42:35] -rw-r--r-- 1 boinc boinc      5111 May 28 23:54 queuedata.json
[2025-05-30 16:42:35] -rw-rw-r-- 1 boinc boinc       100 May 30 14:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 16:42:35] -rwxr-xr-x 1 boinc boinc      7986 May 30 14:05 run_atlas
[2025-05-30 16:42:35] -rw-rw-r-- 1 boinc boinc       105 May 30 14:05 job.xml
[2025-05-30 16:42:35] -rw-rw-r-- 1 boinc boinc      9446 May 30 14:05 init_data.xml
[2025-05-30 16:42:35] -rw-r--r-- 2 boinc boinc 222552921 May 30 14:05 EVNT.44871834._003579.pool.root.1
[2025-05-30 16:42:35] drwxrwx--x 2 boinc boinc      4096 May 30 14:05 shared
[2025-05-30 16:42:35] -rw-r--r-- 2 boinc boinc    508876 May 30 14:05 input.tar.gz
[2025-05-30 16:42:35] -rw-r--r-- 2 boinc boinc     15093 May 30 14:05 start_atlas.sh
[2025-05-30 16:42:35] -rw-rw-r-- 1 boinc boinc         0 May 30 14:05 boinc_lockfile
[2025-05-30 16:42:35] -rw-rw-r-- 1 boinc boinc      2559 May 30 14:05 pandaJob.out
[2025-05-30 16:42:35] -rw------- 1 boinc boinc    988007 May 30 14:07 agis_schedconf.cvmfs.json
[2025-05-30 16:42:35] -rw------- 1 boinc boinc   1603667 May 30 14:07 agis_ddmendpoints.agis.ALL.json
[2025-05-30 16:42:35] drwx------ 4 boinc boinc      4096 May 30 14:07 pilot3
[2025-05-30 16:42:35] -rw------- 1 boinc boinc 198807841 May 30 16:36 HITS.44871837._092022.pool.root.1
[2025-05-30 16:42:35] -rw-rw-r-- 1 boinc boinc       529 May 30 16:39 boinc_task_state.xml
[2025-05-30 16:42:35] -rw------- 1 boinc boinc      1044 May 30 16:41 memory_monitor_summary.json
[2025-05-30 16:42:35] -rw------- 1 boinc boinc    402435 May 30 16:41 log.44871837._092022.job.log.tgz.1
[2025-05-30 16:42:35] -rw------- 1 boinc boinc        95 May 30 16:41 pilot_heartbeat.json
[2025-05-30 16:42:35] -rw-rw-r-- 1 boinc boinc        27 May 30 16:42 wrapper_checkpoint.txt
[2025-05-30 16:42:35] -rw-rw-r-- 1 boinc boinc      8192 May 30 16:42 boinc_mmap_file
[2025-05-30 16:42:35] -rw------- 1 boinc boinc      7719 May 30 16:42 heartbeat.json
[2025-05-30 16:42:35] -rw------- 1 boinc boinc      4449 May 30 16:42 pilotlog.txt
[2025-05-30 16:42:35] -rw------- 1 boinc boinc    876201 May 30 16:42 log.44871837._092022.job.log.1
[2025-05-30 16:42:35] -rw------- 1 boinc boinc       357 May 30 16:42 output.list
[2025-05-30 16:42:35] -rw-rw-r-- 1 boinc boinc       620 May 30 16:42 runtime_log
[2025-05-30 16:42:35] -rw------- 1 boinc boinc   1300480 May 30 16:42 result.tar.gz
[2025-05-30 16:42:35] -rw-rw-r-- 1 boinc boinc      8973 May 30 16:42 runtime_log.err
[2025-05-30 16:42:35] -rw------- 1 boinc boinc       661 May 30 16:42 PCPODmAmfe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXJUKDmu9w9Tn.diag
[2025-05-30 16:42:35] -rw-rw-r-- 1 boinc boinc     20962 May 30 16:42 stderr.txt
[2025-05-30 16:42:36] HITS file was successfully produced:
[2025-05-30 16:42:36] -rw------- 1 boinc boinc 198807841 May 30 16:36 shared/HITS.pool.root.1
[2025-05-30 16:42:36]  *** Contents of shared directory: ***
[2025-05-30 16:42:36] total 413284
[2025-05-30 16:42:36] -rw-r--r-- 2 boinc boinc 222552921 May 30 14:05 ATLAS.root_0
[2025-05-30 16:42:36] -rw-r--r-- 2 boinc boinc    508876 May 30 14:05 input.tar.gz
[2025-05-30 16:42:36] -rw-r--r-- 2 boinc boinc     15093 May 30 14:05 start_atlas.sh
[2025-05-30 16:42:36] -rw------- 1 boinc boinc 198807841 May 30 16:36 HITS.pool.root.1
[2025-05-30 16:42:36] -rw------- 1 boinc boinc   1300480 May 30 16:42 result.tar.gz
16:42:37 (958664): run_atlas exited; CPU time 46495.956813
16:42:37 (958664): called boinc_finish(0)

</stderr_txt>
]]>

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