Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:25:33 (2435193): wrapper (7.7.26015): starting
23:25:33 (2435193): wrapper: running run_atlas (--nthreads 12)
[2025-05-28 23:25:33] Arguments: --nthreads 12
[2025-05-28 23:25:33] Threads: 12
[2025-05-28 23:25:33] Checking for CVMFS
[2025-05-28 23:25:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 23:25:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 23:25:33] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 23:25:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 23:25:33] 2.11.5.0 3710071 14661 229180 146546 1 351 34492693 45568000 11019 130560 0 155049261 99.812 89406543 25799 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-28 23:25:33] CVMFS is ok
[2025-05-28 23:25:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 23:25:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 23:25:33] Further information can be found at the LHC@home message board.
[2025-05-28 23:25:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 23:25:33] Checking for apptainer binary...
[2025-05-28 23:25:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 23:25:33] Running /usr/bin/apptainer --version
[2025-05-28 23:25:34] apptainer version 1.4.0-1.el9
[2025-05-28 23:25:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 23:25:34] wns0041.triumf.lcg
[2025-05-28 23:25:34] apptainer works
[2025-05-28 23:25:34] Set ATHENA_PROC_NUMBER=12
[2025-05-28 23:25:34] Set ATHENA_CORE_NUMBER=12
[2025-05-28 23:25:34] Starting ATLAS job with PandaID=6669136147
[2025-05-28 23:25:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 23:28:34]  *** The last 200 lines of the pilot log: ***
[2025-05-28 23:28:34] 2025-05-29 06:28:20,499 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 23:28:34] 2025-05-29 06:28:20,499 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 23:28:34] 2025-05-29 06:28:20,499 | WARNING  | found no stored workdir sizes
[2025-05-28 23:28:34] 2025-05-29 06:28:20,499 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 23:28:34] 2025-05-29 06:28:20,499 | WARNING  | wrong length of table data, x=[1748499965.0], y=[917.0] (must be same and length>=4)
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | ..............................
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . Timing measurements:
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . get job = 0 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . initial setup = 3 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . payload setup = 4 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . stage-in = 0 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . payload execution = 14 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . stage-out = 0 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . log creation = 0 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | ..............................
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669136147/pilotlog.txt
[2025-05-28 23:28:34] 2025-05-29 06:28:20,510 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-28 23:28:34] - Log from pilotlog.txt -
[2025-05-28 23:28:34] 2025-05-29 06:28:20,498 | INFO     | extracted standard info from prmon json
[2025-05-28 23:28:34] 2025-05-29 06:28:20,498 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 23:28:34] 2025-05-29 06:28:20,498 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 23:28:34] 2025-05-29 06:28:20,499 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 23:28:34] 2025-05-29 06:28:20,499 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 23:28:34] 2025-05-29 06:28:20,499 | WARNING  | found no stored workdir sizes
[2025-05-28 23:28:34] 2025-05-29 06:28:20,499 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 23:28:34] 2025-05-29 06:28:20,499 | WARNING  | wrong length of table data, x=[1748499965.0], y=[917.0] (must be same and length>=4)
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | ..............................
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . Timing measurements:
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . get job = 0 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . initial setup = 3 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . payload setup = 4 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . stage-in = 0 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . payload execution = 14 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . stage-out = 0 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . log creation = 0 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | ..............................
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669136147/pilotlog.txt
[2025-05-28 23:28:34] 2025-05-29 06:28:20,510 | WARNING  | 
[2025-05-28 23:28:34] [begin log extracts]
[2025-05-28 23:28:34] - Log from pilotlog.txt -
[2025-05-28 23:28:34] 2025-05-29 06:28:20,498 | INFO     | extracted standard info from prmon json
[2025-05-28 23:28:34] 2025-05-29 06:28:20,498 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 23:28:34] 2025-05-29 06:28:20,498 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 23:28:34] 2025-05-29 06:28:20,499 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 23:28:34] 2025-05-29 06:28:20,499 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 23:28:34] 2025-05-29 06:28:20,499 | WARNING  | found no stored workdir sizes
[2025-05-28 23:28:34] 2025-05-29 06:28:20,499 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 23:28:34] 2025-05-29 06:28:20,499 | WARNING  | wrong length of table data, x=[1748499965.0], y=[917.0] (must be same and length>=4)
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | ..............................
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . Timing measurements:
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . get job = 0 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . initial setup = 3 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . payload setup = 4 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . stage-in = 0 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . payload execution = 14 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . stage-out = 0 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | . log creation = 0 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | ..............................
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 23:28:34] 2025-05-29 06:28:20,500 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669136147/pilotlog.txt
[2025-05-28 23:28:34] [end log extracts]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,510 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-28 23:28:34] 2025-05-29 06:28:20,511 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-28 23:28:34] 2025-05-29 06:28:20,572 | INFO     | 
[2025-05-28 23:28:34] 2025-05-29 06:28:20,572 | INFO     | job summary report
[2025-05-28 23:28:34] 2025-05-29 06:28:20,572 | INFO     | --------------------------------------------------
[2025-05-28 23:28:34] 2025-05-29 06:28:20,572 | INFO     | PanDA job id: 6669136147
[2025-05-28 23:28:34] 2025-05-29 06:28:20,572 | INFO     | task id: 44871837
[2025-05-28 23:28:34] 2025-05-29 06:28:20,572 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-28 23:26:12,355 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-28 23:28:34] 2025-05-29 06:28:20,572 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 23:28:34] 2025-05-29 06:28:20,572 | INFO     | pilot state: failed 
[2025-05-28 23:28:34] 2025-05-29 06:28:20,572 | INFO     | transexitcode: 65
[2025-05-28 23:28:34] 2025-05-29 06:28:20,573 | INFO     | exeerrorcode: 65
[2025-05-28 23:28:34] 2025-05-29 06:28:20,573 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 23:28:34] 2025-05-29 06:28:20,573 | INFO     | exitcode: 65
[2025-05-28 23:28:34] 2025-05-29 06:28:20,573 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 23:28:34] 2025-05-29 06:28:20,573 | INFO     | cpuconsumptiontime: 16 s
[2025-05-28 23:28:34] 2025-05-29 06:28:20,573 | INFO     | nevents: 0
[2025-05-28 23:28:34] 2025-05-29 06:28:20,573 | INFO     | neventsw: 0
[2025-05-28 23:28:34] 2025-05-29 06:28:20,573 | INFO     | pid: 2445606
[2025-05-28 23:28:34] 2025-05-29 06:28:20,573 | INFO     | pgrp: 2445606
[2025-05-28 23:28:34] 2025-05-29 06:28:20,573 | INFO     | corecount: 12
[2025-05-28 23:28:34] 2025-05-29 06:28:20,573 | INFO     | event service: False
[2025-05-28 23:28:34] 2025-05-29 06:28:20,573 | INFO     | sizes: {0: 2405009, 1: 2405208, 4: 2405414, 11: 2405442, 22: 2432806, 24: 2432806, 144: 2433076}
[2025-05-28 23:28:34] 2025-05-29 06:28:20,573 | INFO     | --------------------------------------------------
[2025-05-28 23:28:34] 2025-05-29 06:28:20,573 | INFO     | 
[2025-05-28 23:28:34] 2025-05-29 06:28:20,573 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-28 23:28:34] 2025-05-29 06:28:20,588 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,588 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,588 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,588 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,588 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,588 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,588 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,588 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,588 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,588 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,588 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,588 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,589 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,589 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,589 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,589 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,589 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,589 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 23:28:34] 2025-05-29 06:28:20,589 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,589 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 23:28:34] 2025-05-29 06:28:20,589 | INFO     | job 6669136147 has completed (purged errors)
[2025-05-28 23:28:34] 2025-05-29 06:28:20,589 | INFO     | overall cleanup function is called
[2025-05-28 23:28:34] 2025-05-29 06:28:21,595 | INFO     | --- collectZombieJob: --- 10, [2445606]
[2025-05-28 23:28:34] 2025-05-29 06:28:21,595 | INFO     | zombie collector waiting for pid 2445606
[2025-05-28 23:28:34] 2025-05-29 06:28:21,595 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 23:28:34] 2025-05-29 06:28:21,595 | INFO     | collected zombie processes
[2025-05-28 23:28:34] 2025-05-29 06:28:21,595 | INFO     | will attempt to kill all subprocesses of pid=2445606
[2025-05-28 23:28:34] 2025-05-29 06:28:21,730 | INFO     | process IDs to be killed: [2445606] (in reverse order)
[2025-05-28 23:28:34] 2025-05-29 06:28:21,782 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 23:28:34] 2025-05-29 06:28:21,783 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 23:28:34] 2025-05-29 06:28:21,789 | INFO     | did not find any defunct processes belonging to 2445606
[2025-05-28 23:28:34] 2025-05-29 06:28:21,794 | INFO     | did not find any defunct processes belonging to 2445606
[2025-05-28 23:28:34] 2025-05-29 06:28:21,795 | INFO     | ready for new job
[2025-05-28 23:28:34] 2025-05-29 06:28:21,795 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 23:28:34] 2025-05-29 06:28:21,796 | INFO     | **************************************
[2025-05-28 23:28:34] 2025-05-29 06:28:21,796 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 23:28:34] 2025-05-29 06:28:21,796 | INFO     | **************************************
[2025-05-28 23:28:34] 2025-05-29 06:28:21,796 | INFO     | 
[2025-05-28 23:28:34] 2025-05-29 06:28:21,798 | INFO     | architecture information:
[2025-05-28 23:28:34] 2025-05-29 06:28:21,798 | INFO     | executing command: cat /etc/os-release
[2025-05-28 23:28:34] 2025-05-29 06:28:21,809 | INFO     | cat /etc/os-release:
[2025-05-28 23:28:34] NAME="CentOS Linux"
[2025-05-28 23:28:34] VERSION="7 (Core)"
[2025-05-28 23:28:34] ID="centos"
[2025-05-28 23:28:34] ID_LIKE="rhel fedora"
[2025-05-28 23:28:34] VERSION_ID="7"
[2025-05-28 23:28:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 23:28:34] ANSI_COLOR="0;31"
[2025-05-28 23:28:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 23:28:34] HOME_URL="https://www.centos.org/"
[2025-05-28 23:28:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 23:28:34] 
[2025-05-28 23:28:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 23:28:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 23:28:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 23:28:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 23:28:34] 
[2025-05-28 23:28:34] 2025-05-29 06:28:21,809 | INFO     | **************************************
[2025-05-28 23:28:34] 2025-05-29 06:28:22,312 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-28 23:28:34] 2025-05-29 06:28:22,324 | INFO     | sufficient remaining disk space (1994853974016 B)
[2025-05-28 23:28:34] 2025-05-29 06:28:22,324 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 23:28:34] 2025-05-29 06:28:22,325 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 23:28:34] 2025-05-29 06:28:22,325 | INFO     | update_server=False
[2025-05-28 23:28:34] 2025-05-29 06:28:22,325 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 23:28:34] 2025-05-29 06:28:22,325 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 23:28:34] 2025-05-29 06:28:22,325 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 23:28:34] 2025-05-29 06:28:22,326 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 23:28:34] 2025-05-29 06:28:22,326 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 23:28:34] 2025-05-29 06:28:22,326 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 23:28:34] 2025-05-29 06:28:22,404 | INFO     | all payload control threads have been joined
[2025-05-28 23:28:34] 2025-05-29 06:28:22,724 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 23:28:34] 2025-05-29 06:28:22,755 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-28 23:28:34] 2025-05-29 06:28:22,755 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-28 23:28:34] 2025-05-29 06:28:22,755 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 23:28:34] 2025-05-29 06:28:22,755 | INFO     | will abort loop
[2025-05-28 23:28:34] 2025-05-29 06:28:22,982 | INFO     | all data control threads have been joined
[2025-05-28 23:28:34] 2025-05-29 06:28:23,275 | INFO     | all job control threads have been joined
[2025-05-28 23:28:34] 2025-05-29 06:28:23,330 | INFO     | [job] retrieve thread has finished
[2025-05-28 23:28:34] 2025-05-29 06:28:23,331 | INFO     | [job] queue monitor thread has finished
[2025-05-28 23:28:34] 2025-05-29 06:28:23,364 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 23:28:34] 2025-05-29 06:28:23,409 | INFO     | [payload] control thread has finished
[2025-05-28 23:28:34] 2025-05-29 06:28:23,671 | INFO     | [payload] failed_post thread has finished
[2025-05-28 23:28:34] 2025-05-29 06:28:23,719 | INFO     | [job] validate thread has finished
[2025-05-28 23:28:34] 2025-05-29 06:28:23,760 | INFO     | [job] job monitor thread has finished
[2025-05-28 23:28:34] 2025-05-29 06:28:23,842 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 23:28:34] 2025-05-29 06:28:23,978 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 23:28:34] 2025-05-29 06:28:23,987 | INFO     | [data] control thread has finished
[2025-05-28 23:28:34] 2025-05-29 06:28:24,072 | INFO     | [payload] validate_post thread has finished
[2025-05-28 23:28:34] 2025-05-29 06:28:24,119 | INFO     | [data] copytool_in thread has finished
[2025-05-28 23:28:34] 2025-05-29 06:28:24,277 | INFO     | [job] control thread has finished
[2025-05-28 23:28:34] 2025-05-29 06:28:24,432 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 23:28:34] 2025-05-29 06:28:24,555 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 23:28:34] 2025-05-29 06:28:24,730 | INFO     | [data] copytool_out thread has finished
[2025-05-28 23:28:34] 2025-05-29 06:28:28,438 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 23:28:34] 2025-05-29 06:28:29,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140373037967168)>', '<ExcThread(monitor, started 140372273522432)>']
[2025-05-28 23:28:34] 2025-05-29 06:28:30,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 23:28:34] 2025-05-29 06:28:30,359 | INFO     | [monitor] control thread has ended
[2025-05-28 23:28:34] 2025-05-29 06:28:34,628 | INFO     | all workflow threads have been joined
[2025-05-28 23:28:34] 2025-05-29 06:28:34,628 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 23:28:34] 2025-05-29 06:28:34,628 | INFO     | traces error code: 0
[2025-05-28 23:28:34] 2025-05-29 06:28:34,628 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 23:28:34] 2025-05-29 06:28:34,763 [wrapper] ==== pilot stdout END ====
[2025-05-28 23:28:34] 2025-05-29 06:28:34,765 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 23:28:34] 2025-05-29 06:28:34,767 [wrapper] pilotpid: 2439294
[2025-05-28 23:28:34] 2025-05-29 06:28:34,769 [wrapper] Pilot exit status: 0
[2025-05-28 23:28:34] 2025-05-29 06:28:34,777 [wrapper] pandaids: 6669136147
[2025-05-28 23:28:34] 2025-05-29 06:28:34,812 [wrapper] cleanup supervisor_pilot 2439300 2439295
[2025-05-28 23:28:34] 2025-05-29 06:28:34,814 [wrapper] Test setup, not cleaning
[2025-05-28 23:28:34] 2025-05-29 06:28:34,817 [wrapper] apfmon messages muted
[2025-05-28 23:28:34] 2025-05-29 06:28:34,819 [wrapper] ==== wrapper stdout END ====
[2025-05-28 23:28:34] 2025-05-29 06:28:34,821 [wrapper] ==== wrapper stderr END ====
[2025-05-28 23:28:34]  *** Error codes and diagnostics ***
[2025-05-28 23:28:34]     "exeErrorCode": 65,
[2025-05-28 23:28:34]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 23:28:34]     "pilotErrorCode": 1305,
[2025-05-28 23:28:34]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 23:28:34]  *** Listing of results directory ***
[2025-05-28 23:28:34] total 223984
[2025-05-28 23:28:34] -rw-r--r--. 1 boinc boinc    495897 May 28 20:09 pilot3.tar.gz
[2025-05-28 23:28:34] -rwx------. 1 boinc boinc     37140 May 28 20:22 runpilot2-wrapper.sh
[2025-05-28 23:28:34] -rw-r--r--. 1 boinc boinc      5111 May 28 20:22 queuedata.json
[2025-05-28 23:28:34] -rw-r--r--. 1 boinc boinc       100 May 28 23:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 23:28:34] -rwxr-xr-x. 1 boinc boinc      7986 May 28 23:25 run_atlas
[2025-05-28 23:28:34] -rw-r--r--. 1 boinc boinc       105 May 28 23:25 job.xml
[2025-05-28 23:28:34] -rw-r--r--. 2 boinc boinc 225334010 May 28 23:25 EVNT.44871834._003668.pool.root.1
[2025-05-28 23:28:34] -rw-r--r--. 1 boinc boinc      6602 May 28 23:25 init_data.xml
[2025-05-28 23:28:34] -rw-r--r--. 2 boinc boinc     15093 May 28 23:25 start_atlas.sh
[2025-05-28 23:28:34] drwxrwx--x. 2 boinc boinc      4096 May 28 23:25 shared
[2025-05-28 23:28:34] -rw-r--r--. 2 boinc boinc    508870 May 28 23:25 input.tar.gz
[2025-05-28 23:28:34] -rw-r--r--. 1 boinc boinc         0 May 28 23:25 boinc_lockfile
[2025-05-28 23:28:34] -rw-r--r--. 1 boinc boinc      2558 May 28 23:25 pandaJob.out
[2025-05-28 23:28:34] -rw-------. 1 boinc boinc    993147 May 28 23:25 agis_schedconf.cvmfs.json
[2025-05-28 23:28:34] -rw-------. 1 boinc boinc   1603667 May 28 23:25 agis_ddmendpoints.agis.ALL.json
[2025-05-28 23:28:34] drwx------. 4 boinc boinc      4096 May 28 23:25 pilot3
[2025-05-28 23:28:34] -rw-r--r--. 1 boinc boinc       522 May 28 23:26 boinc_task_state.xml
[2025-05-28 23:28:34] -rw-------. 1 boinc boinc       950 May 28 23:26 memory_monitor_summary.json
[2025-05-28 23:28:34] -rw-------. 1 boinc boinc     19884 May 28 23:26 log.44871837._094348.job.log.tgz.1
[2025-05-28 23:28:34] -rw-------. 1 boinc boinc        95 May 28 23:27 pilot_heartbeat.json
[2025-05-28 23:28:34] -rw-------. 1 boinc boinc      8325 May 28 23:28 heartbeat.json
[2025-05-28 23:28:34] -rw-r--r--. 1 boinc boinc      8192 May 28 23:28 boinc_mmap_file
[2025-05-28 23:28:34] -rw-r--r--. 1 boinc boinc        22 May 28 23:28 wrapper_checkpoint.txt
[2025-05-28 23:28:34] -rw-------. 1 boinc boinc      4661 May 28 23:28 pilotlog.txt
[2025-05-28 23:28:34] -rw-------. 1 boinc boinc     73047 May 28 23:28 log.44871837._094348.job.log.1
[2025-05-28 23:28:34] -rw-------. 1 boinc boinc       188 May 28 23:28 output.list
[2025-05-28 23:28:34] -rw-r--r--. 1 boinc boinc       620 May 28 23:28 runtime_log
[2025-05-28 23:28:34] -rw-------. 1 boinc boinc    112640 May 28 23:28 result.tar.gz
[2025-05-28 23:28:34] -rw-------. 1 boinc boinc       645 May 28 23:28 T1tLDmv1ie7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmugdKDmtYhLPn.diag
[2025-05-28 23:28:34] -rw-r--r--. 1 boinc boinc      8484 May 28 23:28 runtime_log.err
[2025-05-28 23:28:34] -rw-r--r--. 1 boinc boinc     21503 May 28 23:28 stderr.txt
[2025-05-28 23:28:34] No HITS result produced
[2025-05-28 23:28:34]  *** Contents of shared directory: ***
[2025-05-28 23:28:34] total 220684
[2025-05-28 23:28:34] -rw-r--r--. 2 boinc boinc 225334010 May 28 23:25 ATLAS.root_0
[2025-05-28 23:28:34] -rw-r--r--. 2 boinc boinc     15093 May 28 23:25 start_atlas.sh
[2025-05-28 23:28:34] -rw-r--r--. 2 boinc boinc    508870 May 28 23:25 input.tar.gz
[2025-05-28 23:28:34] -rw-------. 1 boinc boinc    112640 May 28 23:28 result.tar.gz
23:28:36 (2435193): run_atlas exited; CPU time 18.775402
23:28:36 (2435193): called boinc_finish(0)

</stderr_txt>
]]>

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