Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:51:11 (461529): wrapper (7.7.26015): starting
01:51:11 (461529): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 01:51:11] Arguments: --nthreads 4
[2025-06-05 01:51:11] Threads: 4
[2025-06-05 01:51:11] Checking for CVMFS
[2025-06-05 01:51:11] No cvmfs_config command found, will try listing directly
[2025-06-05 01:51:11] CVMFS is ok
[2025-06-05 01:51:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 01:51:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 01:51:11] Further information can be found at the LHC@home message board.
[2025-06-05 01:51:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:51:11] Checking for apptainer binary...
[2025-06-05 01:51:11] which: no apptainer in ((null))
[2025-06-05 01:51:11] apptainer is not installed, using version from CVMFS
[2025-06-05 01:51:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:51:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-06-05 01:51:12] apptainer works
[2025-06-05 01:51:12] Set ATHENA_PROC_NUMBER=4
[2025-06-05 01:51:12] Set ATHENA_CORE_NUMBER=4
[2025-06-05 01:51:12] Starting ATLAS job with PandaID=6669135956
[2025-06-05 01:51:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:08:43]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:08:43] 2025-06-05 03:07:37,216 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 05:08:43] 2025-06-05 03:07:37,217 | INFO     | using path: /scratch/boinc/var/slot84/slots/0/PanDA_Pilot-6669135956/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:08:43] 2025-06-05 03:07:37,217 | INFO     | extracted standard info from prmon json
[2025-06-05 05:08:43] 2025-06-05 03:07:37,218 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:08:43] 2025-06-05 03:07:37,218 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:08:43] 2025-06-05 03:07:37,218 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:08:43] 2025-06-05 03:07:37,218 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:08:43] 2025-06-05 03:07:37,222 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:08:43] 2025-06-05 03:07:37,222 | INFO     | sum of square deviations: 2229146912.0
[2025-06-05 05:08:43] 2025-06-05 03:07:37,223 | INFO     | sum of deviations: 17179694312.999998
[2025-06-05 05:08:43] 2025-06-05 03:07:37,223 | INFO     | mean x: 1749086975.0
[2025-06-05 05:08:43] 2025-06-05 03:07:37,224 | INFO     | mean y: 2295828.8756476683
[2025-06-05 05:08:43] 2025-06-05 03:07:37,224 | INFO     | -- intersect: -13477649972.62829
[2025-06-05 05:08:43] 2025-06-05 03:07:37,224 | INFO     | intersect: -13477649972.62829
[2025-06-05 05:08:43] 2025-06-05 03:07:37,224 | INFO     | chi2: 2.4305552423436123
[2025-06-05 05:08:43] 2025-06-05 03:07:37,224 | INFO     | sum of square deviations: 2060343747.0
[2025-06-05 05:08:43] 2025-06-05 03:07:37,226 | INFO     | sum of deviations: 28612287503.499996
[2025-06-05 05:08:43] 2025-06-05 03:07:37,226 | INFO     | mean x: 1749086822.5
[2025-06-05 05:08:43] 2025-06-05 03:07:37,226 | INFO     | mean y: 2305927.739361702
[2025-06-05 05:08:43] 2025-06-05 03:07:37,226 | INFO     | -- intersect: -24287512267.318005
[2025-06-05 05:08:43] 2025-06-05 03:07:37,226 | INFO     | intersect: -24287512267.318005
[2025-06-05 05:08:43] 2025-06-05 03:07:37,226 | INFO     | chi2: 1.632602955815855
[2025-06-05 05:08:43] 2025-06-05 03:07:37,226 | INFO     | current chi2=1.632602955815855 (change=32.8300411620494 %)
[2025-06-05 05:08:43] 2025-06-05 03:07:37,227 | INFO     | sum of square deviations: 1900284932.0
[2025-06-05 05:08:43] 2025-06-05 03:07:37,228 | INFO     | sum of deviations: 27738638274.999996
[2025-06-05 05:08:43] 2025-06-05 03:07:37,228 | INFO     | mean x: 1749086670.0
[2025-06-05 05:08:43] 2025-06-05 03:07:37,228 | INFO     | mean y: 2305095.2240437157
[2025-06-05 05:08:43] 2025-06-05 03:07:37,228 | INFO     | -- intersect: -25529277897.275463
[2025-06-05 05:08:43] 2025-06-05 03:07:37,228 | INFO     | intersect: -25529277897.275463
[2025-06-05 05:08:43] 2025-06-05 03:07:37,228 | INFO     | chi2: 1.6338299294427907
[2025-06-05 05:08:43] 2025-06-05 03:07:37,228 | INFO     | current chi2=1.6338299294427907 (change=-0.07515444110675022 %)
[2025-06-05 05:08:43] 2025-06-05 03:07:37,229 | INFO     | right removable region: 182
[2025-06-05 05:08:43] 2025-06-05 03:07:37,229 | INFO     | sum of square deviations: 2060343747.0
[2025-06-05 05:08:43] 2025-06-05 03:07:37,230 | INFO     | sum of deviations: -12777563250.000002
[2025-06-05 05:08:43] 2025-06-05 03:07:37,230 | INFO     | mean x: 1749087127.5
[2025-06-05 05:08:43] 2025-06-05 03:07:37,230 | INFO     | mean y: 2322593.744680851
[2025-06-05 05:08:43] 2025-06-05 03:07:37,230 | INFO     | -- intersect: 10849576326.97916
[2025-06-05 05:08:43] 2025-06-05 03:07:37,230 | INFO     | intersect: 10849576326.97916
[2025-06-05 05:08:43] 2025-06-05 03:07:37,231 | INFO     | chi2: 0.8288026766043348
[2025-06-05 05:08:43] 2025-06-05 03:07:37,231 | INFO     | current chi2=0.8288026766043348 (change=65.90068548266449 %)
[2025-06-05 05:08:43] 2025-06-05 03:07:37,231 | INFO     | sum of square deviations: 1900284932.0
[2025-06-05 05:08:43] 2025-06-05 03:07:37,232 | INFO     | sum of deviations: -10972801146.0
[2025-06-05 05:08:43] 2025-06-05 03:07:37,232 | INFO     | mean x: 1749087280.0
[2025-06-05 05:08:43] 2025-06-05 03:07:37,232 | INFO     | mean y: 2320878.0710382513
[2025-06-05 05:08:43] 2025-06-05 03:07:37,233 | INFO     | -- intersect: 10102062546.936739
[2025-06-05 05:08:43] 2025-06-05 03:07:37,233 | INFO     | intersect: 10102062546.936739
[2025-06-05 05:08:43] 2025-06-05 03:07:37,233 | INFO     | chi2: 0.8266358210020319
[2025-06-05 05:08:43] 2025-06-05 03:07:37,233 | INFO     | current chi2=0.8266358210020319 (change=0.26144408837826916 %)
[2025-06-05 05:08:43] 2025-06-05 03:07:37,233 | INFO     | left removable region: 20
[2025-06-05 05:08:43] 2025-06-05 03:07:37,233 | INFO     | sum of square deviations: 1318277740.5
[2025-06-05 05:08:43] 2025-06-05 03:07:37,234 | INFO     | sum of deviations: 1568601244.4999995
[2025-06-05 05:08:43] 2025-06-05 03:07:37,234 | INFO     | mean x: 1749087249.5
[2025-06-05 05:08:43] 2025-06-05 03:07:37,235 | INFO     | mean y: 2330777.734567901
[2025-06-05 05:08:43] 2025-06-05 03:07:37,235 | INFO     | -- intersect: -2078885002.5335367
[2025-06-05 05:08:43] 2025-06-05 03:07:37,235 | INFO     | intersect: -2078885002.5335367
[2025-06-05 05:08:43] 2025-06-05 03:07:37,235 | INFO     | chi2: 0.0015754483423713495
[2025-06-05 05:08:43] 2025-06-05 03:07:37,235 | INFO     | -- intersect: -2078885002.5335367
[2025-06-05 05:08:43] 2025-06-05 03:07:37,235 | INFO     | current memory leak: 1.19 B/s (using 162 data points, chi2=0.00)
[2025-06-05 05:08:43] 2025-06-05 03:07:37,236 | INFO     | ..............................
[2025-06-05 05:08:43] 2025-06-05 03:07:37,236 | INFO     | . Timing measurements:
[2025-06-05 05:08:43] 2025-06-05 03:07:37,236 | INFO     | . get job = 0 s
[2025-06-05 05:08:43] 2025-06-05 03:07:37,236 | INFO     | . initial setup = 1 s
[2025-06-05 05:08:43] 2025-06-05 03:07:37,236 | INFO     | . payload setup = 9 s
[2025-06-05 05:08:43] 2025-06-05 03:07:37,236 | INFO     | . stage-in = 0 s
[2025-06-05 05:08:43] 2025-06-05 03:07:37,236 | INFO     | . payload execution = 11729 s
[2025-06-05 05:08:43] 2025-06-05 03:07:37,236 | INFO     | . stage-out = 1 s
[2025-06-05 05:08:43] 2025-06-05 03:07:37,236 | INFO     | . log creation = 0 s
[2025-06-05 05:08:43] 2025-06-05 03:07:37,236 | INFO     | ..............................
[2025-06-05 05:08:43] 2025-06-05 03:07:37,333 | INFO     | 
[2025-06-05 05:08:43] 2025-06-05 03:07:37,334 | INFO     | job summary report
[2025-06-05 05:08:43] 2025-06-05 03:07:37,334 | INFO     | --------------------------------------------------
[2025-06-05 05:08:43] 2025-06-05 03:07:37,334 | INFO     | PanDA job id: 6669135956
[2025-06-05 05:08:43] 2025-06-05 03:07:37,334 | INFO     | task id: 44871837
[2025-06-05 05:08:43] 2025-06-05 03:07:37,334 | INFO     | errors: (none)
[2025-06-05 05:08:43] 2025-06-05 03:07:37,334 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:08:43] 2025-06-05 03:07:37,334 | INFO     | pilot state: finished 
[2025-06-05 05:08:43] 2025-06-05 03:07:37,334 | INFO     | transexitcode: 0
[2025-06-05 05:08:43] 2025-06-05 03:07:37,334 | INFO     | exeerrorcode: 0
[2025-06-05 05:08:43] 2025-06-05 03:07:37,334 | INFO     | exeerrordiag: 
[2025-06-05 05:08:43] 2025-06-05 03:07:37,335 | INFO     | exitcode: 0
[2025-06-05 05:08:43] 2025-06-05 03:07:37,335 | INFO     | exitmsg: OK
[2025-06-05 05:08:43] 2025-06-05 03:07:37,335 | INFO     | cpuconsumptiontime: 44958 s
[2025-06-05 05:08:43] 2025-06-05 03:07:37,335 | INFO     | nevents: 400
[2025-06-05 05:08:43] 2025-06-05 03:07:37,335 | INFO     | neventsw: 0
[2025-06-05 05:08:43] 2025-06-05 03:07:37,335 | INFO     | pid: 473094
[2025-06-05 05:08:43] 2025-06-05 03:07:37,335 | INFO     | pgrp: 473094
[2025-06-05 05:08:43] 2025-06-05 03:07:37,335 | INFO     | corecount: 4
[2025-06-05 05:08:43] 2025-06-05 03:07:37,335 | INFO     | event service: False
[2025-06-05 05:08:43] 2025-06-05 03:07:37,335 | INFO     | sizes: {0: 2396564, 1: 2397431, 8: 2397637, 12: 2397665, 11742: 2427411, 11743: 2427410, 11744: 2436557, 11746: 2436641, 11755: 2436811}
[2025-06-05 05:08:43] 2025-06-05 03:07:37,335 | INFO     | --------------------------------------------------
[2025-06-05 05:08:43] 2025-06-05 03:07:37,335 | INFO     | 
[2025-06-05 05:08:43] 2025-06-05 03:07:37,336 | INFO     | executing command: ls -lF /scratch/boinc/var/slot84/slots/0
[2025-06-05 05:08:43] 2025-06-05 03:07:37,362 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:08:43] 2025-06-05 03:07:37,362 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:08:43] 2025-06-05 03:07:37,362 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:08:43] 2025-06-05 03:07:37,362 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:08:43] 2025-06-05 03:07:37,362 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:08:43] 2025-06-05 03:07:37,362 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:08:43] 2025-06-05 03:07:37,362 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:08:43] 2025-06-05 03:07:37,362 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:08:43] 2025-06-05 03:07:37,363 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:08:43] 2025-06-05 03:07:37,363 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:08:43] 2025-06-05 03:07:37,363 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:08:43] 2025-06-05 03:07:37,363 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:08:43] 2025-06-05 03:07:37,363 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:08:43] 2025-06-05 03:07:37,363 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:08:43] 2025-06-05 03:07:37,363 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:08:43] 2025-06-05 03:07:37,363 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:08:43] 2025-06-05 03:07:37,363 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:08:43] 2025-06-05 03:07:37,363 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:08:43] 2025-06-05 03:07:37,363 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:08:43] 2025-06-05 03:07:37,363 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:08:43] 2025-06-05 03:07:37,363 | INFO     | job 6669135956 has completed (purged errors)
[2025-06-05 05:08:43] 2025-06-05 03:07:37,364 | INFO     | overall cleanup function is called
[2025-06-05 05:08:43] 2025-06-05 03:07:38,373 | INFO     | --- collectZombieJob: --- 10, [473094]
[2025-06-05 05:08:43] 2025-06-05 03:07:38,373 | INFO     | zombie collector waiting for pid 473094
[2025-06-05 05:08:43] 2025-06-05 03:07:38,373 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:08:43] 2025-06-05 03:07:38,374 | INFO     | collected zombie processes
[2025-06-05 05:08:43] 2025-06-05 03:07:38,374 | INFO     | will attempt to kill all subprocesses of pid=473094
[2025-06-05 05:08:43] 2025-06-05 03:07:39,011 | INFO     | process IDs to be killed: [473094] (in reverse order)
[2025-06-05 05:08:43] 2025-06-05 03:07:39,255 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:08:43] 2025-06-05 03:07:39,256 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:08:43] 2025-06-05 03:07:39,283 | INFO     | did not find any defunct processes belonging to 473094
[2025-06-05 05:08:43] 2025-06-05 03:07:39,306 | INFO     | did not find any defunct processes belonging to 473094
[2025-06-05 05:08:43] 2025-06-05 03:07:39,306 | INFO     | ready for new job
[2025-06-05 05:08:43] 2025-06-05 03:07:39,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:08:43] 2025-06-05 03:07:39,309 | INFO     | **************************************
[2025-06-05 05:08:43] 2025-06-05 03:07:39,309 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:08:43] 2025-06-05 03:07:39,309 | INFO     | **************************************
[2025-06-05 05:08:43] 2025-06-05 03:07:39,309 | INFO     | 
[2025-06-05 05:08:43] 2025-06-05 03:07:39,318 | INFO     | architecture information:
[2025-06-05 05:08:43] 2025-06-05 03:07:39,318 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:08:43] 2025-06-05 03:07:39,342 | INFO     | cat /etc/os-release:
[2025-06-05 05:08:43] NAME="CentOS Linux"
[2025-06-05 05:08:43] VERSION="7 (Core)"
[2025-06-05 05:08:43] ID="centos"
[2025-06-05 05:08:43] ID_LIKE="rhel fedora"
[2025-06-05 05:08:43] VERSION_ID="7"
[2025-06-05 05:08:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:08:43] ANSI_COLOR="0;31"
[2025-06-05 05:08:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:08:43] HOME_URL="https://www.centos.org/"
[2025-06-05 05:08:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:08:43] 
[2025-06-05 05:08:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:08:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:08:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:08:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:08:43] 
[2025-06-05 05:08:43] 2025-06-05 03:07:39,342 | INFO     | **************************************
[2025-06-05 05:08:43] 2025-06-05 03:07:39,845 | INFO     | executing command: df -mP /scratch/boinc/var/slot84/slots/0
[2025-06-05 05:08:43] 2025-06-05 03:07:39,870 | INFO     | sufficient remaining disk space (3287409491968 B)
[2025-06-05 05:08:43] 2025-06-05 03:07:39,871 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:08:43] 2025-06-05 03:07:39,871 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:08:43] 2025-06-05 03:07:39,871 | INFO     | update_server=False
[2025-06-05 05:08:43] 2025-06-05 03:07:39,871 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:08:43] 2025-06-05 03:07:39,872 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:08:43] 2025-06-05 03:07:39,872 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:08:43] 2025-06-05 03:07:39,872 | INFO     | aborting loop
[2025-06-05 05:08:43] 2025-06-05 03:07:40,171 | INFO     | all job control threads have been joined
[2025-06-05 05:08:43] 2025-06-05 03:07:40,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:08:43] 2025-06-05 03:07:40,849 | INFO     | all payload control threads have been joined
[2025-06-05 05:08:43] 2025-06-05 03:07:40,851 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:08:43] 2025-06-05 03:07:40,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:08:43] 2025-06-05 03:07:40,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:08:43] 2025-06-05 03:07:40,865 | INFO     | all data control threads have been joined
[2025-06-05 05:08:43] 2025-06-05 03:07:40,877 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:08:43] 2025-06-05 03:07:40,878 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:08:43] 2025-06-05 03:07:40,941 | INFO     | [job] validate thread has finished
[2025-06-05 05:08:43] 2025-06-05 03:07:41,176 | INFO     | [job] control thread has finished
[2025-06-05 05:08:43] 2025-06-05 03:07:41,188 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:08:43] 2025-06-05 03:07:41,280 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:08:43] 2025-06-05 03:07:41,354 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:08:43] 2025-06-05 03:07:41,510 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:08:43] 2025-06-05 03:07:41,808 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:08:43] 2025-06-05 03:07:41,854 | INFO     | [payload] control thread has finished
[2025-06-05 05:08:43] 2025-06-05 03:07:41,870 | INFO     | [data] control thread has finished
[2025-06-05 05:08:43] 2025-06-05 03:07:41,882 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:08:43] 2025-06-05 03:07:42,114 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:08:43] 2025-06-05 03:07:42,201 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:08:43] 2025-06-05 03:07:42,344 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:08:43] 2025-06-05 03:07:43,349 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:08:43] 2025-06-05 03:07:43,879 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:08:43] 2025-06-05 03:07:45,451 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23451231754048)>', '<ExcThread(monitor, started 23450995361536)>']
[2025-06-05 05:08:43] 2025-06-05 03:07:45,878 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:08:43] 2025-06-05 03:07:45,879 | INFO     | [monitor] control thread has ended
[2025-06-05 05:08:43] 2025-06-05 03:07:50,479 | INFO     | all workflow threads have been joined
[2025-06-05 05:08:43] 2025-06-05 03:07:50,479 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:08:43] 2025-06-05 03:07:50,480 | INFO     | traces error code: 0
[2025-06-05 05:08:43] 2025-06-05 03:07:50,480 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:08:43] 2025-06-05 03:07:50,629 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:08:43] 2025-06-05 03:07:50,633 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:08:43] 2025-06-05 03:07:50,637 [wrapper] pilotpid: 465643
[2025-06-05 05:08:43] 2025-06-05 03:07:50,641 [wrapper] Pilot exit status: 0
[2025-06-05 05:08:43] 2025-06-05 03:07:50,655 [wrapper] pandaids: 6669135956
[2025-06-05 05:08:43] 2025-06-05 03:07:50,812 [wrapper] cleanup supervisor_pilot 1212900 465644
[2025-06-05 05:08:43] 2025-06-05 03:07:50,817 [wrapper] Test setup, not cleaning
[2025-06-05 05:08:43] 2025-06-05 03:07:50,821 [wrapper] apfmon messages muted
[2025-06-05 05:08:43] 2025-06-05 03:07:50,825 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:08:43] 2025-06-05 03:07:50,829 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:08:43]  *** Error codes and diagnostics ***
[2025-06-05 05:08:43]     "exeErrorCode": 0,
[2025-06-05 05:08:43]     "exeErrorDiag": "",
[2025-06-05 05:08:43]     "pilotErrorCode": 0,
[2025-06-05 05:08:43]     "pilotErrorDiag": "",
[2025-06-05 05:08:43]  *** Listing of results directory ***
[2025-06-05 05:08:43] total 422244
[2025-06-05 05:08:43] -rw-r--r-- 1 boinc boinc    495897 May 29 05:09 pilot3.tar.gz
[2025-06-05 05:08:43] -rw-r--r-- 1 boinc boinc      5111 May 29 05:12 queuedata.json
[2025-06-05 05:08:43] -rwx------ 1 boinc boinc     37140 May 29 05:13 runpilot2-wrapper.sh
[2025-06-05 05:08:43] -rw-r--r-- 1 boinc boinc       100 Jun  5 01:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:08:43] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 01:51 run_atlas
[2025-06-05 05:08:43] -rw-r--r-- 1 boinc boinc       105 Jun  5 01:51 job.xml
[2025-06-05 05:08:43] -rw-r--r-- 2 boinc boinc 223362977 Jun  5 01:51 EVNT.44871834._003663.pool.root.1
[2025-06-05 05:08:43] -rw-r--r-- 1 boinc boinc      6685 Jun  5 01:51 init_data.xml
[2025-06-05 05:08:43] -rw-r--r-- 2 boinc boinc    508878 Jun  5 01:51 input.tar.gz
[2025-06-05 05:08:43] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:51 start_atlas.sh
[2025-06-05 05:08:43] drwxrwx--x 2 boinc boinc      4096 Jun  5 01:51 shared
[2025-06-05 05:08:43] -rw-r--r-- 1 boinc boinc         0 Jun  5 01:51 boinc_lockfile
[2025-06-05 05:08:43] -rw-r--r-- 1 boinc boinc      2559 Jun  5 01:51 pandaJob.out
[2025-06-05 05:08:43] -rw------- 1 boinc boinc    987117 Jun  5 01:51 agis_schedconf.cvmfs.json
[2025-06-05 05:08:43] drwx------ 4 boinc boinc      4096 Jun  5 01:51 pilot3
[2025-06-05 05:08:43] -rw------- 1 boinc boinc 202335494 Jun  5 05:06 HITS.44871837._094236.pool.root.1
[2025-06-05 05:08:43] -rw-r--r-- 1 boinc boinc       530 Jun  5 05:07 boinc_task_state.xml
[2025-06-05 05:08:43] -rw------- 1 boinc boinc        95 Jun  5 05:07 pilot_heartbeat.json
[2025-06-05 05:08:43] -rw------- 1 boinc boinc      1031 Jun  5 05:07 memory_monitor_summary.json
[2025-06-05 05:08:43] -rw------- 1 boinc boinc   1598969 Jun  5 05:07 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:08:43] -rw------- 1 boinc boinc    329838 Jun  5 05:07 log.44871837._094236.job.log.tgz.1
[2025-06-05 05:08:43] -rw------- 1 boinc boinc      7702 Jun  5 05:07 heartbeat.json
[2025-06-05 05:08:43] -rw------- 1 boinc boinc      4364 Jun  5 05:07 pilotlog.txt
[2025-06-05 05:08:43] -rw------- 1 boinc boinc   1092398 Jun  5 05:07 log.44871837._094236.job.log.1
[2025-06-05 05:08:43] -rw------- 1 boinc boinc       357 Jun  5 05:07 output.list
[2025-06-05 05:08:43] -rw-r--r-- 1 boinc boinc       620 Jun  5 05:07 runtime_log
[2025-06-05 05:08:43] -rw------- 1 boinc boinc   1443840 Jun  5 05:07 result.tar.gz
[2025-06-05 05:08:43] -rw-r--r-- 1 boinc boinc      9026 Jun  5 05:07 runtime_log.err
[2025-06-05 05:08:43] -rw------- 1 boinc boinc       664 Jun  5 05:07 nCILDmosie7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmafdKDmSaV20n.diag
[2025-06-05 05:08:43] -rw-r--r-- 1 boinc boinc        27 Jun  5 05:08 wrapper_checkpoint.txt
[2025-06-05 05:08:43] -rw-r--r-- 1 boinc boinc      8192 Jun  5 05:08 boinc_mmap_file
[2025-06-05 05:08:43] -rw-r--r-- 1 boinc boinc     20628 Jun  5 05:08 stderr.txt
[2025-06-05 05:08:43] HITS file was successfully produced:
[2025-06-05 05:08:43] -rw------- 1 boinc boinc 202335494 Jun  5 05:06 shared/HITS.pool.root.1
[2025-06-05 05:08:43]  *** Contents of shared directory: ***
[2025-06-05 05:08:43] total 417660
[2025-06-05 05:08:43] -rw-r--r-- 2 boinc boinc 223362977 Jun  5 01:51 ATLAS.root_0
[2025-06-05 05:08:43] -rw-r--r-- 2 boinc boinc    508878 Jun  5 01:51 input.tar.gz
[2025-06-05 05:08:43] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:51 start_atlas.sh
[2025-06-05 05:08:43] -rw------- 1 boinc boinc 202335494 Jun  5 05:06 HITS.pool.root.1
[2025-06-05 05:08:43] -rw------- 1 boinc boinc   1443840 Jun  5 05:07 result.tar.gz
05:08:44 (461529): run_atlas exited; CPU time 45673.990842
05:08:44 (461529): called boinc_finish(0)

</stderr_txt>
]]>

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