Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:23:52 (2136879): wrapper (7.7.26015): starting
23:23:52 (2136879): wrapper: running run_atlas (--nthreads 12)
[2025-05-28 23:23:52] Arguments: --nthreads 12
[2025-05-28 23:23:52] Threads: 12
[2025-05-28 23:23:52] Checking for CVMFS
[2025-05-28 23:23:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 23:23:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 23:23:52] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 23:23:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 23:23:52] 2.11.5.0 2441 41892 227124 146546 0 193 32900997 45568001 10821 130560 0 409778934 99.803 250825695 23992 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-28 23:23:52] CVMFS is ok
[2025-05-28 23:23:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 23:23:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 23:23:52] Further information can be found at the LHC@home message board.
[2025-05-28 23:23:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 23:23:52] Checking for apptainer binary...
[2025-05-28 23:23:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 23:23:52] Running /usr/bin/apptainer --version
[2025-05-28 23:23:52] apptainer version 1.4.0-1.el9
[2025-05-28 23:23:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 23:23:52] wns0089.triumf.lcg
[2025-05-28 23:23:52] apptainer works
[2025-05-28 23:23:52] Set ATHENA_PROC_NUMBER=12
[2025-05-28 23:23:52] Set ATHENA_CORE_NUMBER=12
[2025-05-28 23:23:52] Starting ATLAS job with PandaID=6669135852
[2025-05-28 23:23:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 23:26:52]  *** The last 200 lines of the pilot log: ***
[2025-05-28 23:26:52] 2025-05-29 06:26:38,064 | INFO     | extracted standard info from prmon json
[2025-05-28 23:26:52] 2025-05-29 06:26:38,064 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 23:26:52] 2025-05-29 06:26:38,064 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 23:26:52] 2025-05-29 06:26:38,064 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 23:26:52] 2025-05-29 06:26:38,064 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 23:26:52] 2025-05-29 06:26:38,064 | WARNING  | found no stored workdir sizes
[2025-05-28 23:26:52] 2025-05-29 06:26:38,065 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 23:26:52] 2025-05-29 06:26:38,065 | WARNING  | wrong length of table data, x=[1748499863.0], y=[20371.0] (must be same and length>=4)
[2025-05-28 23:26:52] 2025-05-29 06:26:38,065 | INFO     | ..............................
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . Timing measurements:
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . get job = 0 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . initial setup = 2 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . payload setup = 3 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . stage-in = 0 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . payload execution = 15 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . stage-out = 0 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . log creation = 0 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | ..............................
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669135852/pilotlog.txt
[2025-05-28 23:26:52] 2025-05-29 06:26:38,077 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-28 23:26:52] - Log from pilotlog.txt -
[2025-05-28 23:26:52] 2025-05-29 06:26:38,064 | INFO     | extracted standard info from prmon json
[2025-05-28 23:26:52] 2025-05-29 06:26:38,064 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 23:26:52] 2025-05-29 06:26:38,064 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 23:26:52] 2025-05-29 06:26:38,064 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 23:26:52] 2025-05-29 06:26:38,064 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 23:26:52] 2025-05-29 06:26:38,064 | WARNING  | found no stored workdir sizes
[2025-05-28 23:26:52] 2025-05-29 06:26:38,065 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 23:26:52] 2025-05-29 06:26:38,065 | WARNING  | wrong length of table data, x=[1748499863.0], y=[20371.0] (must be same and length>=4)
[2025-05-28 23:26:52] 2025-05-29 06:26:38,065 | INFO     | ..............................
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . Timing measurements:
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . get job = 0 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . initial setup = 2 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . payload setup = 3 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . stage-in = 0 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . payload execution = 15 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . stage-out = 0 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . log creation = 0 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | ..............................
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669135852/pilotlog.txt
[2025-05-28 23:26:52] 2025-05-29 06:26:38,077 | WARNING  | 
[2025-05-28 23:26:52] [begin log extracts]
[2025-05-28 23:26:52] - Log from pilotlog.txt -
[2025-05-28 23:26:52] 2025-05-29 06:26:38,064 | INFO     | extracted standard info from prmon json
[2025-05-28 23:26:52] 2025-05-29 06:26:38,064 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 23:26:52] 2025-05-29 06:26:38,064 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 23:26:52] 2025-05-29 06:26:38,064 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 23:26:52] 2025-05-29 06:26:38,064 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 23:26:52] 2025-05-29 06:26:38,064 | WARNING  | found no stored workdir sizes
[2025-05-28 23:26:52] 2025-05-29 06:26:38,065 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 23:26:52] 2025-05-29 06:26:38,065 | WARNING  | wrong length of table data, x=[1748499863.0], y=[20371.0] (must be same and length>=4)
[2025-05-28 23:26:52] 2025-05-29 06:26:38,065 | INFO     | ..............................
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . Timing measurements:
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . get job = 0 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . initial setup = 2 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . payload setup = 3 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . stage-in = 0 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . payload execution = 15 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . stage-out = 0 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | . log creation = 0 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | ..............................
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 23:26:52] 2025-05-29 06:26:38,066 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669135852/pilotlog.txt
[2025-05-28 23:26:52] [end log extracts]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,078 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-28 23:26:52] 2025-05-29 06:26:38,078 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-28 23:26:52] 2025-05-29 06:26:38,569 | INFO     | 
[2025-05-28 23:26:52] 2025-05-29 06:26:38,569 | INFO     | job summary report
[2025-05-28 23:26:52] 2025-05-29 06:26:38,569 | INFO     | --------------------------------------------------
[2025-05-28 23:26:52] 2025-05-29 06:26:38,569 | INFO     | PanDA job id: 6669135852
[2025-05-28 23:26:52] 2025-05-29 06:26:38,569 | INFO     | task id: 44871837
[2025-05-28 23:26:52] 2025-05-29 06:26:38,569 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-28 23:24:30,483 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-28 23:26:52] 2025-05-29 06:26:38,569 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 23:26:52] 2025-05-29 06:26:38,569 | INFO     | pilot state: failed 
[2025-05-28 23:26:52] 2025-05-29 06:26:38,569 | INFO     | transexitcode: 65
[2025-05-28 23:26:52] 2025-05-29 06:26:38,569 | INFO     | exeerrorcode: 65
[2025-05-28 23:26:52] 2025-05-29 06:26:38,569 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 23:26:52] 2025-05-29 06:26:38,569 | INFO     | exitcode: 65
[2025-05-28 23:26:52] 2025-05-29 06:26:38,569 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 23:26:52] 2025-05-29 06:26:38,569 | INFO     | cpuconsumptiontime: 16 s
[2025-05-28 23:26:52] 2025-05-29 06:26:38,569 | INFO     | nevents: 0
[2025-05-28 23:26:52] 2025-05-29 06:26:38,569 | INFO     | neventsw: 0
[2025-05-28 23:26:52] 2025-05-29 06:26:38,570 | INFO     | pid: 2146739
[2025-05-28 23:26:52] 2025-05-29 06:26:38,570 | INFO     | pgrp: 2146739
[2025-05-28 23:26:52] 2025-05-29 06:26:38,570 | INFO     | corecount: 12
[2025-05-28 23:26:52] 2025-05-29 06:26:38,570 | INFO     | event service: False
[2025-05-28 23:26:52] 2025-05-29 06:26:38,570 | INFO     | sizes: {0: 2405231, 3: 2405437, 11: 2405465, 22: 2428590, 23: 2432829, 24: 2432829, 143: 2433099}
[2025-05-28 23:26:52] 2025-05-29 06:26:38,570 | INFO     | --------------------------------------------------
[2025-05-28 23:26:52] 2025-05-29 06:26:38,570 | INFO     | 
[2025-05-28 23:26:52] 2025-05-29 06:26:38,570 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-28 23:26:52] 2025-05-29 06:26:38,584 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,584 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,584 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,584 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,585 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,585 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,585 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,585 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,585 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,585 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,585 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,585 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,585 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,585 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,585 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 23:26:52] 2025-05-29 06:26:38,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,585 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 23:26:52] 2025-05-29 06:26:38,586 | INFO     | job 6669135852 has completed (purged errors)
[2025-05-28 23:26:52] 2025-05-29 06:26:38,586 | INFO     | overall cleanup function is called
[2025-05-28 23:26:52] 2025-05-29 06:26:39,592 | INFO     | --- collectZombieJob: --- 10, [2146739]
[2025-05-28 23:26:52] 2025-05-29 06:26:39,592 | INFO     | zombie collector waiting for pid 2146739
[2025-05-28 23:26:52] 2025-05-29 06:26:39,592 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 23:26:52] 2025-05-29 06:26:39,592 | INFO     | collected zombie processes
[2025-05-28 23:26:52] 2025-05-29 06:26:39,592 | INFO     | will attempt to kill all subprocesses of pid=2146739
[2025-05-28 23:26:52] 2025-05-29 06:26:39,726 | INFO     | process IDs to be killed: [2146739] (in reverse order)
[2025-05-28 23:26:52] 2025-05-29 06:26:39,780 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 23:26:52] 2025-05-29 06:26:39,780 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 23:26:52] 2025-05-29 06:26:39,786 | INFO     | did not find any defunct processes belonging to 2146739
[2025-05-28 23:26:52] 2025-05-29 06:26:39,792 | INFO     | did not find any defunct processes belonging to 2146739
[2025-05-28 23:26:52] 2025-05-29 06:26:39,792 | INFO     | ready for new job
[2025-05-28 23:26:52] 2025-05-29 06:26:39,792 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 23:26:52] 2025-05-29 06:26:39,794 | INFO     | **************************************
[2025-05-28 23:26:52] 2025-05-29 06:26:39,794 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 23:26:52] 2025-05-29 06:26:39,794 | INFO     | **************************************
[2025-05-28 23:26:52] 2025-05-29 06:26:39,794 | INFO     | 
[2025-05-28 23:26:52] 2025-05-29 06:26:39,796 | INFO     | architecture information:
[2025-05-28 23:26:52] 2025-05-29 06:26:39,796 | INFO     | executing command: cat /etc/os-release
[2025-05-28 23:26:52] 2025-05-29 06:26:39,807 | INFO     | cat /etc/os-release:
[2025-05-28 23:26:52] NAME="CentOS Linux"
[2025-05-28 23:26:52] VERSION="7 (Core)"
[2025-05-28 23:26:52] ID="centos"
[2025-05-28 23:26:52] ID_LIKE="rhel fedora"
[2025-05-28 23:26:52] VERSION_ID="7"
[2025-05-28 23:26:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 23:26:52] ANSI_COLOR="0;31"
[2025-05-28 23:26:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 23:26:52] HOME_URL="https://www.centos.org/"
[2025-05-28 23:26:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 23:26:52] 
[2025-05-28 23:26:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 23:26:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 23:26:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 23:26:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 23:26:52] 
[2025-05-28 23:26:52] 2025-05-29 06:26:39,808 | INFO     | **************************************
[2025-05-28 23:26:52] 2025-05-29 06:26:40,311 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-28 23:26:52] 2025-05-29 06:26:40,324 | INFO     | sufficient remaining disk space (2012884238336 B)
[2025-05-28 23:26:52] 2025-05-29 06:26:40,324 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 23:26:52] 2025-05-29 06:26:40,324 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 23:26:52] 2025-05-29 06:26:40,324 | INFO     | update_server=False
[2025-05-28 23:26:52] 2025-05-29 06:26:40,324 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 23:26:52] 2025-05-29 06:26:40,556 | INFO     | all data control threads have been joined
[2025-05-28 23:26:52] 2025-05-29 06:26:40,622 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 23:26:52] 2025-05-29 06:26:40,622 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 23:26:52] 2025-05-29 06:26:40,622 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 23:26:52] 2025-05-29 06:26:40,855 | INFO     | all job control threads have been joined
[2025-05-28 23:26:52] 2025-05-29 06:26:41,067 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 23:26:52] 2025-05-29 06:26:41,067 | INFO     | aborting loop
[2025-05-28 23:26:52] 2025-05-29 06:26:41,181 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 23:26:52] 2025-05-29 06:26:41,330 | INFO     | [job] retrieve thread has finished
[2025-05-28 23:26:52] 2025-05-29 06:26:41,451 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 23:26:52] 2025-05-29 06:26:41,470 | INFO     | [payload] validate_post thread has finished
[2025-05-28 23:26:52] 2025-05-29 06:26:41,494 | INFO     | all payload control threads have been joined
[2025-05-28 23:26:52] 2025-05-29 06:26:41,564 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 23:26:52] 2025-05-29 06:26:41,564 | INFO     | [data] control thread has finished
[2025-05-28 23:26:52] 2025-05-29 06:26:41,856 | INFO     | [job] control thread has finished
[2025-05-28 23:26:52] 2025-05-29 06:26:41,913 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 23:26:52] 2025-05-29 06:26:41,992 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 23:26:52] 2025-05-29 06:26:42,070 | INFO     | [payload] failed_post thread has finished
[2025-05-28 23:26:52] 2025-05-29 06:26:42,073 | INFO     | [job] job monitor thread has finished
[2025-05-28 23:26:52] 2025-05-29 06:26:42,499 | INFO     | [payload] control thread has finished
[2025-05-28 23:26:52] 2025-05-29 06:26:42,628 | INFO     | [job] validate thread has finished
[2025-05-28 23:26:52] 2025-05-29 06:26:42,687 | INFO     | [data] copytool_in thread has finished
[2025-05-28 23:26:52] 2025-05-29 06:26:42,823 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 23:26:52] 2025-05-29 06:26:43,152 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 23:26:52] 2025-05-29 06:26:43,187 | INFO     | [data] copytool_out thread has finished
[2025-05-28 23:26:52] 2025-05-29 06:26:44,152 | INFO     | [job] queue monitor thread has finished
[2025-05-28 23:26:52] 2025-05-29 06:26:45,918 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 23:26:52] 2025-05-29 06:26:47,224 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140001377810240)>', '<ExcThread(monitor, started 140000549132032)>']
[2025-05-28 23:26:52] 2025-05-29 06:26:47,657 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 23:26:52] 2025-05-29 06:26:47,658 | INFO     | [monitor] control thread has ended
[2025-05-28 23:26:52] 2025-05-29 06:26:52,250 | INFO     | all workflow threads have been joined
[2025-05-28 23:26:52] 2025-05-29 06:26:52,250 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 23:26:52] 2025-05-29 06:26:52,250 | INFO     | traces error code: 0
[2025-05-28 23:26:52] 2025-05-29 06:26:52,251 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 23:26:52] 2025-05-29 06:26:52,374 [wrapper] ==== pilot stdout END ====
[2025-05-28 23:26:52] 2025-05-29 06:26:52,376 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 23:26:52] 2025-05-29 06:26:52,379 [wrapper] pilotpid: 2140434
[2025-05-28 23:26:52] 2025-05-29 06:26:52,381 [wrapper] Pilot exit status: 0
[2025-05-28 23:26:52] 2025-05-29 06:26:52,388 [wrapper] pandaids: 6669135852
[2025-05-28 23:26:52] 2025-05-29 06:26:52,421 [wrapper] cleanup supervisor_pilot 2140440 2140435
[2025-05-28 23:26:52] 2025-05-29 06:26:52,423 [wrapper] Test setup, not cleaning
[2025-05-28 23:26:52] 2025-05-29 06:26:52,425 [wrapper] apfmon messages muted
[2025-05-28 23:26:52] 2025-05-29 06:26:52,428 [wrapper] ==== wrapper stdout END ====
[2025-05-28 23:26:52] 2025-05-29 06:26:52,430 [wrapper] ==== wrapper stderr END ====
[2025-05-28 23:26:52]  *** Error codes and diagnostics ***
[2025-05-28 23:26:52]     "exeErrorCode": 65,
[2025-05-28 23:26:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 23:26:52]     "pilotErrorCode": 1305,
[2025-05-28 23:26:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 23:26:52]  *** Listing of results directory ***
[2025-05-28 23:26:52] total 220540
[2025-05-28 23:26:52] -rw-r--r--. 1 boinc boinc      5111 May 28 20:08 queuedata.json
[2025-05-28 23:26:52] -rwx------. 1 boinc boinc     37140 May 28 20:09 runpilot2-wrapper.sh
[2025-05-28 23:26:52] -rw-r--r--. 1 boinc boinc    495897 May 28 20:09 pilot3.tar.gz
[2025-05-28 23:26:52] -rw-r--r--. 1 boinc boinc       100 May 28 23:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 23:26:52] -rwxr-xr-x. 1 boinc boinc      7986 May 28 23:23 run_atlas
[2025-05-28 23:26:52] -rw-r--r--. 1 boinc boinc       105 May 28 23:23 job.xml
[2025-05-28 23:26:52] -rw-r--r--. 1 boinc boinc      6602 May 28 23:23 init_data.xml
[2025-05-28 23:26:52] -rw-r--r--. 2 boinc boinc 221803955 May 28 23:23 EVNT.44871834._003659.pool.root.1
[2025-05-28 23:26:52] -rw-r--r--. 2 boinc boinc     15093 May 28 23:23 start_atlas.sh
[2025-05-28 23:26:52] drwxrwx--x. 2 boinc boinc      4096 May 28 23:23 shared
[2025-05-28 23:26:52] -rw-r--r--. 2 boinc boinc    508874 May 28 23:23 input.tar.gz
[2025-05-28 23:26:52] -rw-r--r--. 1 boinc boinc         0 May 28 23:23 boinc_lockfile
[2025-05-28 23:26:52] -rw-r--r--. 1 boinc boinc      2559 May 28 23:23 pandaJob.out
[2025-05-28 23:26:52] -rw-------. 1 boinc boinc    993147 May 28 23:23 agis_schedconf.cvmfs.json
[2025-05-28 23:26:52] -rw-------. 1 boinc boinc   1603667 May 28 23:23 agis_ddmendpoints.agis.ALL.json
[2025-05-28 23:26:52] drwx------. 4 boinc boinc      4096 May 28 23:24 pilot3
[2025-05-28 23:26:52] -rw-------. 1 boinc boinc       962 May 28 23:24 memory_monitor_summary.json
[2025-05-28 23:26:52] -rw-r--r--. 1 boinc boinc       522 May 28 23:24 boinc_task_state.xml
[2025-05-28 23:26:52] -rw-------. 1 boinc boinc     20440 May 28 23:24 log.44871837._094132.job.log.tgz.1
[2025-05-28 23:26:52] -rw-------. 1 boinc boinc        95 May 28 23:26 pilot_heartbeat.json
[2025-05-28 23:26:52] -rw-------. 1 boinc boinc      8308 May 28 23:26 heartbeat.json
[2025-05-28 23:26:52] -rw-r--r--. 1 boinc boinc      8192 May 28 23:26 boinc_mmap_file
[2025-05-28 23:26:52] -rw-r--r--. 1 boinc boinc        22 May 28 23:26 wrapper_checkpoint.txt
[2025-05-28 23:26:52] -rw-------. 1 boinc boinc      4352 May 28 23:26 pilotlog.txt
[2025-05-28 23:26:52] -rw-------. 1 boinc boinc     72745 May 28 23:26 log.44871837._094132.job.log.1
[2025-05-28 23:26:52] -rw-------. 1 boinc boinc       188 May 28 23:26 output.list
[2025-05-28 23:26:52] -rw-r--r--. 1 boinc boinc       620 May 28 23:26 runtime_log
[2025-05-28 23:26:52] -rw-------. 1 boinc boinc    112640 May 28 23:26 result.tar.gz
[2025-05-28 23:26:52] -rw-------. 1 boinc boinc       645 May 28 23:26 SqKNDmQpie7n9Rq4apOajLDm4fhM0noT9bVof3QYDmBXUKDmGSgR1n.diag
[2025-05-28 23:26:52] -rw-r--r--. 1 boinc boinc      8484 May 28 23:26 runtime_log.err
[2025-05-28 23:26:52] -rw-r--r--. 1 boinc boinc     21439 May 28 23:26 stderr.txt
[2025-05-28 23:26:52] No HITS result produced
[2025-05-28 23:26:52]  *** Contents of shared directory: ***
[2025-05-28 23:26:52] total 217240
[2025-05-28 23:26:52] -rw-r--r--. 2 boinc boinc 221803955 May 28 23:23 ATLAS.root_0
[2025-05-28 23:26:52] -rw-r--r--. 2 boinc boinc     15093 May 28 23:23 start_atlas.sh
[2025-05-28 23:26:52] -rw-r--r--. 2 boinc boinc    508874 May 28 23:23 input.tar.gz
[2025-05-28 23:26:52] -rw-------. 1 boinc boinc    112640 May 28 23:26 result.tar.gz
23:26:54 (2136879): run_atlas exited; CPU time 19.263444
23:26:54 (2136879): called boinc_finish(0)

</stderr_txt>
]]>

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