Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:18:21 (2314364): wrapper (7.7.26015): starting
23:18:21 (2314364): wrapper: running run_atlas (--nthreads 12)
[2025-05-28 23:18:21] Arguments: --nthreads 12
[2025-05-28 23:18:21] Threads: 12
[2025-05-28 23:18:21] Checking for CVMFS
[2025-05-28 23:18:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 23:18:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 23:18:21] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 23:18:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 23:18:21] 2.11.5.0 3006969 14658 225832 146545 1 215 31986791 45568000 8805 130560 0 141899695 99.790 93173129 25764 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-28 23:18:21] CVMFS is ok
[2025-05-28 23:18:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 23:18:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 23:18:21] Further information can be found at the LHC@home message board.
[2025-05-28 23:18:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 23:18:21] Checking for apptainer binary...
[2025-05-28 23:18:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 23:18:21] Running /usr/bin/apptainer --version
[2025-05-28 23:18:21] apptainer version 1.4.0-1.el9
[2025-05-28 23:18:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 23:18:22] wns0027.triumf.lcg
[2025-05-28 23:18:22] apptainer works
[2025-05-28 23:18:22] Set ATHENA_PROC_NUMBER=12
[2025-05-28 23:18:22] Set ATHENA_CORE_NUMBER=12
[2025-05-28 23:18:22] Starting ATLAS job with PandaID=6669135397
[2025-05-28 23:18:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 23:21:21]  *** The last 200 lines of the pilot log: ***
[2025-05-28 23:21:21] 2025-05-29 06:21:07,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 23:21:21] 2025-05-29 06:21:07,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 23:21:21] 2025-05-29 06:21:07,505 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 23:21:21] 2025-05-29 06:21:07,505 | WARNING  | found no stored workdir sizes
[2025-05-28 23:21:21] 2025-05-29 06:21:07,505 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | WARNING  | wrong length of table data, x=[1748499531.0], y=[1037.0] (must be same and length>=4)
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | ..............................
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . Timing measurements:
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . get job = 0 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . initial setup = 2 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . payload setup = 3 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . stage-in = 0 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . payload execution = 15 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . stage-out = 0 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . log creation = 0 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | ..............................
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 23:21:21] 2025-05-29 06:21:07,507 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669135397/pilotlog.txt
[2025-05-28 23:21:21] 2025-05-29 06:21:07,515 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-28 23:21:21] - Log from pilotlog.txt -
[2025-05-28 23:21:21] 2025-05-29 06:21:07,504 | INFO     | extracted standard info from prmon json
[2025-05-28 23:21:21] 2025-05-29 06:21:07,504 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 23:21:21] 2025-05-29 06:21:07,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 23:21:21] 2025-05-29 06:21:07,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 23:21:21] 2025-05-29 06:21:07,505 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 23:21:21] 2025-05-29 06:21:07,505 | WARNING  | found no stored workdir sizes
[2025-05-28 23:21:21] 2025-05-29 06:21:07,505 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | WARNING  | wrong length of table data, x=[1748499531.0], y=[1037.0] (must be same and length>=4)
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | ..............................
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . Timing measurements:
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . get job = 0 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . initial setup = 2 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . payload setup = 3 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . stage-in = 0 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . payload execution = 15 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . stage-out = 0 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . log creation = 0 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | ..............................
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 23:21:21] 2025-05-29 06:21:07,507 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669135397/pilotlog.txt
[2025-05-28 23:21:21] 2025-05-29 06:21:07,515 | WARNING  | 
[2025-05-28 23:21:21] [begin log extracts]
[2025-05-28 23:21:21] - Log from pilotlog.txt -
[2025-05-28 23:21:21] 2025-05-29 06:21:07,504 | INFO     | extracted standard info from prmon json
[2025-05-28 23:21:21] 2025-05-29 06:21:07,504 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 23:21:21] 2025-05-29 06:21:07,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 23:21:21] 2025-05-29 06:21:07,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 23:21:21] 2025-05-29 06:21:07,505 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 23:21:21] 2025-05-29 06:21:07,505 | WARNING  | found no stored workdir sizes
[2025-05-28 23:21:21] 2025-05-29 06:21:07,505 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | WARNING  | wrong length of table data, x=[1748499531.0], y=[1037.0] (must be same and length>=4)
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | ..............................
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . Timing measurements:
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . get job = 0 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . initial setup = 2 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . payload setup = 3 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . stage-in = 0 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . payload execution = 15 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . stage-out = 0 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | . log creation = 0 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | ..............................
[2025-05-28 23:21:21] 2025-05-29 06:21:07,506 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 23:21:21] 2025-05-29 06:21:07,507 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669135397/pilotlog.txt
[2025-05-28 23:21:21] [end log extracts]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,516 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-28 23:21:21] 2025-05-29 06:21:07,516 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-28 23:21:21] 2025-05-29 06:21:07,574 | INFO     | 
[2025-05-28 23:21:21] 2025-05-29 06:21:07,574 | INFO     | job summary report
[2025-05-28 23:21:21] 2025-05-29 06:21:07,574 | INFO     | --------------------------------------------------
[2025-05-28 23:21:21] 2025-05-29 06:21:07,574 | INFO     | PanDA job id: 6669135397
[2025-05-28 23:21:21] 2025-05-29 06:21:07,574 | INFO     | task id: 44871837
[2025-05-28 23:21:21] 2025-05-29 06:21:07,574 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-28 23:18:58,689 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-28 23:21:21] 2025-05-29 06:21:07,574 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 23:21:21] 2025-05-29 06:21:07,575 | INFO     | pilot state: failed 
[2025-05-28 23:21:21] 2025-05-29 06:21:07,575 | INFO     | transexitcode: 65
[2025-05-28 23:21:21] 2025-05-29 06:21:07,575 | INFO     | exeerrorcode: 65
[2025-05-28 23:21:21] 2025-05-29 06:21:07,575 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 23:21:21] 2025-05-29 06:21:07,575 | INFO     | exitcode: 65
[2025-05-28 23:21:21] 2025-05-29 06:21:07,575 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 23:21:21] 2025-05-29 06:21:07,575 | INFO     | cpuconsumptiontime: 15 s
[2025-05-28 23:21:21] 2025-05-29 06:21:07,575 | INFO     | nevents: 0
[2025-05-28 23:21:21] 2025-05-29 06:21:07,575 | INFO     | neventsw: 0
[2025-05-28 23:21:21] 2025-05-29 06:21:07,575 | INFO     | pid: 2324228
[2025-05-28 23:21:21] 2025-05-29 06:21:07,575 | INFO     | pgrp: 2324228
[2025-05-28 23:21:21] 2025-05-29 06:21:07,575 | INFO     | corecount: 12
[2025-05-28 23:21:21] 2025-05-29 06:21:07,575 | INFO     | event service: False
[2025-05-28 23:21:21] 2025-05-29 06:21:07,575 | INFO     | sizes: {0: 2405060, 1: 2405259, 3: 2405465, 11: 2405493, 22: 2432857, 24: 2432857, 144: 2433127}
[2025-05-28 23:21:21] 2025-05-29 06:21:07,575 | INFO     | --------------------------------------------------
[2025-05-28 23:21:21] 2025-05-29 06:21:07,575 | INFO     | 
[2025-05-28 23:21:21] 2025-05-29 06:21:07,575 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-28 23:21:21] 2025-05-29 06:21:07,588 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,589 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,589 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,589 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,589 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,589 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,589 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,589 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,589 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,589 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,589 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,589 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,589 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,590 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 23:21:21] 2025-05-29 06:21:07,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,590 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 23:21:21] 2025-05-29 06:21:07,590 | INFO     | job 6669135397 has completed (purged errors)
[2025-05-28 23:21:21] 2025-05-29 06:21:07,590 | INFO     | overall cleanup function is called
[2025-05-28 23:21:21] 2025-05-29 06:21:08,597 | INFO     | --- collectZombieJob: --- 10, [2324228]
[2025-05-28 23:21:21] 2025-05-29 06:21:08,597 | INFO     | zombie collector waiting for pid 2324228
[2025-05-28 23:21:21] 2025-05-29 06:21:08,598 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 23:21:21] 2025-05-29 06:21:08,598 | INFO     | collected zombie processes
[2025-05-28 23:21:21] 2025-05-29 06:21:08,598 | INFO     | will attempt to kill all subprocesses of pid=2324228
[2025-05-28 23:21:21] 2025-05-29 06:21:08,719 | INFO     | process IDs to be killed: [2324228] (in reverse order)
[2025-05-28 23:21:21] 2025-05-29 06:21:08,766 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 23:21:21] 2025-05-29 06:21:08,767 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 23:21:21] 2025-05-29 06:21:08,772 | INFO     | did not find any defunct processes belonging to 2324228
[2025-05-28 23:21:21] 2025-05-29 06:21:08,777 | INFO     | did not find any defunct processes belonging to 2324228
[2025-05-28 23:21:21] 2025-05-29 06:21:08,777 | INFO     | ready for new job
[2025-05-28 23:21:21] 2025-05-29 06:21:08,777 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 23:21:21] 2025-05-29 06:21:08,779 | INFO     | **************************************
[2025-05-28 23:21:21] 2025-05-29 06:21:08,780 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 23:21:21] 2025-05-29 06:21:08,780 | INFO     | **************************************
[2025-05-28 23:21:21] 2025-05-29 06:21:08,780 | INFO     | 
[2025-05-28 23:21:21] 2025-05-29 06:21:08,782 | INFO     | architecture information:
[2025-05-28 23:21:21] 2025-05-29 06:21:08,782 | INFO     | executing command: cat /etc/os-release
[2025-05-28 23:21:21] 2025-05-29 06:21:08,792 | INFO     | cat /etc/os-release:
[2025-05-28 23:21:21] NAME="CentOS Linux"
[2025-05-28 23:21:21] VERSION="7 (Core)"
[2025-05-28 23:21:21] ID="centos"
[2025-05-28 23:21:21] ID_LIKE="rhel fedora"
[2025-05-28 23:21:21] VERSION_ID="7"
[2025-05-28 23:21:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 23:21:21] ANSI_COLOR="0;31"
[2025-05-28 23:21:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 23:21:21] HOME_URL="https://www.centos.org/"
[2025-05-28 23:21:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 23:21:21] 
[2025-05-28 23:21:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 23:21:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 23:21:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 23:21:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 23:21:21] 
[2025-05-28 23:21:21] 2025-05-29 06:21:08,793 | INFO     | **************************************
[2025-05-28 23:21:21] 2025-05-29 06:21:09,296 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-28 23:21:21] 2025-05-29 06:21:09,309 | INFO     | sufficient remaining disk space (2068527972352 B)
[2025-05-28 23:21:21] 2025-05-29 06:21:09,309 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 23:21:21] 2025-05-29 06:21:09,309 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 23:21:21] 2025-05-29 06:21:09,309 | INFO     | update_server=False
[2025-05-28 23:21:21] 2025-05-29 06:21:09,309 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 23:21:21] 2025-05-29 06:21:09,310 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 23:21:21] 2025-05-29 06:21:09,351 | INFO     | all payload control threads have been joined
[2025-05-28 23:21:21] 2025-05-29 06:21:09,541 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-28 23:21:21] 2025-05-29 06:21:09,542 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-28 23:21:21] 2025-05-29 06:21:09,542 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 23:21:21] 2025-05-29 06:21:09,542 | INFO     | will abort loop
[2025-05-28 23:21:21] 2025-05-29 06:21:09,684 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 23:21:21] 2025-05-29 06:21:09,856 | INFO     | all data control threads have been joined
[2025-05-28 23:21:21] 2025-05-29 06:21:10,083 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 23:21:21] 2025-05-29 06:21:10,084 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 23:21:21] 2025-05-29 06:21:10,084 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 23:21:21] 2025-05-29 06:21:10,176 | INFO     | all job control threads have been joined
[2025-05-28 23:21:21] 2025-05-29 06:21:10,314 | INFO     | [job] retrieve thread has finished
[2025-05-28 23:21:21] 2025-05-29 06:21:10,315 | INFO     | [job] queue monitor thread has finished
[2025-05-28 23:21:21] 2025-05-29 06:21:10,356 | INFO     | [payload] control thread has finished
[2025-05-28 23:21:21] 2025-05-29 06:21:10,441 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 23:21:21] 2025-05-29 06:21:10,546 | INFO     | [job] job monitor thread has finished
[2025-05-28 23:21:21] 2025-05-29 06:21:10,669 | INFO     | [job] validate thread has finished
[2025-05-28 23:21:21] 2025-05-29 06:21:10,745 | INFO     | [data] copytool_in thread has finished
[2025-05-28 23:21:21] 2025-05-29 06:21:10,752 | INFO     | [payload] failed_post thread has finished
[2025-05-28 23:21:21] 2025-05-29 06:21:10,827 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 23:21:21] 2025-05-29 06:21:10,861 | INFO     | [data] control thread has finished
[2025-05-28 23:21:21] 2025-05-29 06:21:10,938 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 23:21:21] 2025-05-29 06:21:11,030 | INFO     | [payload] validate_post thread has finished
[2025-05-28 23:21:21] 2025-05-29 06:21:11,182 | INFO     | [job] control thread has finished
[2025-05-28 23:21:21] 2025-05-29 06:21:11,396 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 23:21:21] 2025-05-29 06:21:11,486 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 23:21:21] 2025-05-29 06:21:11,690 | INFO     | [data] copytool_out thread has finished
[2025-05-28 23:21:21] 2025-05-29 06:21:15,398 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 23:21:21] 2025-05-29 06:21:16,507 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140410653693760)>', '<ExcThread(monitor, started 140409997096704)>']
[2025-05-28 23:21:21] 2025-05-29 06:21:17,120 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 23:21:21] 2025-05-29 06:21:17,120 | INFO     | [monitor] control thread has ended
[2025-05-28 23:21:21] 2025-05-29 06:21:21,532 | INFO     | all workflow threads have been joined
[2025-05-28 23:21:21] 2025-05-29 06:21:21,533 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 23:21:21] 2025-05-29 06:21:21,533 | INFO     | traces error code: 0
[2025-05-28 23:21:21] 2025-05-29 06:21:21,533 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 23:21:21] 2025-05-29 06:21:21,685 [wrapper] ==== pilot stdout END ====
[2025-05-28 23:21:21] 2025-05-29 06:21:21,687 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 23:21:21] 2025-05-29 06:21:21,689 [wrapper] pilotpid: 2317928
[2025-05-28 23:21:21] 2025-05-29 06:21:21,690 [wrapper] Pilot exit status: 0
[2025-05-28 23:21:21] 2025-05-29 06:21:21,697 [wrapper] pandaids: 6669135397
[2025-05-28 23:21:21] 2025-05-29 06:21:21,726 [wrapper] cleanup supervisor_pilot 2317934 2317929
[2025-05-28 23:21:21] 2025-05-29 06:21:21,728 [wrapper] Test setup, not cleaning
[2025-05-28 23:21:21] 2025-05-29 06:21:21,730 [wrapper] apfmon messages muted
[2025-05-28 23:21:21] 2025-05-29 06:21:21,731 [wrapper] ==== wrapper stdout END ====
[2025-05-28 23:21:21] 2025-05-29 06:21:21,733 [wrapper] ==== wrapper stderr END ====
[2025-05-28 23:21:21]  *** Error codes and diagnostics ***
[2025-05-28 23:21:21]     "exeErrorCode": 65,
[2025-05-28 23:21:21]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 23:21:21]     "pilotErrorCode": 1305,
[2025-05-28 23:21:21]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 23:21:21]  *** Listing of results directory ***
[2025-05-28 23:21:21] total 221940
[2025-05-28 23:21:21] -rw-r--r--. 1 boinc boinc    495897 May 28 19:51 pilot3.tar.gz
[2025-05-28 23:21:21] -rw-r--r--. 1 boinc boinc      5111 May 28 20:04 queuedata.json
[2025-05-28 23:21:21] -rwx------. 1 boinc boinc     37140 May 28 20:05 runpilot2-wrapper.sh
[2025-05-28 23:21:21] -rw-r--r--. 1 boinc boinc       100 May 28 23:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 23:21:21] -rwxr-xr-x. 1 boinc boinc      7986 May 28 23:18 run_atlas
[2025-05-28 23:21:21] -rw-r--r--. 1 boinc boinc       105 May 28 23:18 job.xml
[2025-05-28 23:21:21] -rw-r--r--. 1 boinc boinc      6601 May 28 23:18 init_data.xml
[2025-05-28 23:21:21] -rw-r--r--. 2 boinc boinc 223232537 May 28 23:18 EVNT.44871834._003656.pool.root.1
[2025-05-28 23:21:21] -rw-r--r--. 2 boinc boinc     15093 May 28 23:18 start_atlas.sh
[2025-05-28 23:21:21] drwxrwx--x. 2 boinc boinc      4096 May 28 23:18 shared
[2025-05-28 23:21:21] -rw-r--r--. 2 boinc boinc    508879 May 28 23:18 input.tar.gz
[2025-05-28 23:21:21] -rw-r--r--. 1 boinc boinc         0 May 28 23:18 boinc_lockfile
[2025-05-28 23:21:21] -rw-r--r--. 1 boinc boinc      2559 May 28 23:18 pandaJob.out
[2025-05-28 23:21:21] -rw-------. 1 boinc boinc    993415 May 28 23:18 agis_schedconf.cvmfs.json
[2025-05-28 23:21:21] -rw-------. 1 boinc boinc   1603667 May 28 23:18 agis_ddmendpoints.agis.ALL.json
[2025-05-28 23:21:21] drwx------. 4 boinc boinc      4096 May 28 23:18 pilot3
[2025-05-28 23:21:21] -rw-------. 1 boinc boinc       970 May 28 23:19 memory_monitor_summary.json
[2025-05-28 23:21:21] -rw-r--r--. 1 boinc boinc       522 May 28 23:19 boinc_task_state.xml
[2025-05-28 23:21:21] -rw-------. 1 boinc boinc     20521 May 28 23:19 log.44871837._094048.job.log.tgz.1
[2025-05-28 23:21:21] -rw-------. 1 boinc boinc        95 May 28 23:20 pilot_heartbeat.json
[2025-05-28 23:21:21] -rw-------. 1 boinc boinc      8314 May 28 23:21 heartbeat.json
[2025-05-28 23:21:21] -rw-r--r--. 1 boinc boinc      8192 May 28 23:21 boinc_mmap_file
[2025-05-28 23:21:21] -rw-r--r--. 1 boinc boinc        22 May 28 23:21 wrapper_checkpoint.txt
[2025-05-28 23:21:21] -rw-------. 1 boinc boinc      4538 May 28 23:21 pilotlog.txt
[2025-05-28 23:21:21] -rw-------. 1 boinc boinc     72909 May 28 23:21 log.44871837._094048.job.log.1
[2025-05-28 23:21:21] -rw-------. 1 boinc boinc       188 May 28 23:21 output.list
[2025-05-28 23:21:21] -rw-r--r--. 1 boinc boinc       620 May 28 23:21 runtime_log
[2025-05-28 23:21:21] -rw-------. 1 boinc boinc    112640 May 28 23:21 result.tar.gz
[2025-05-28 23:21:21] -rw-------. 1 boinc boinc       646 May 28 23:21 YMcLDmklie7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7ddKDmlMH9Fm.diag
[2025-05-28 23:21:21] -rw-r--r--. 1 boinc boinc      8484 May 28 23:21 runtime_log.err
[2025-05-28 23:21:21] -rw-r--r--. 1 boinc boinc     21459 May 28 23:21 stderr.txt
[2025-05-28 23:21:21] No HITS result produced
[2025-05-28 23:21:21]  *** Contents of shared directory: ***
[2025-05-28 23:21:21] total 218636
[2025-05-28 23:21:21] -rw-r--r--. 2 boinc boinc 223232537 May 28 23:18 ATLAS.root_0
[2025-05-28 23:21:21] -rw-r--r--. 2 boinc boinc     15093 May 28 23:18 start_atlas.sh
[2025-05-28 23:21:21] -rw-r--r--. 2 boinc boinc    508879 May 28 23:18 input.tar.gz
[2025-05-28 23:21:21] -rw-------. 1 boinc boinc    112640 May 28 23:21 result.tar.gz
23:21:23 (2314364): run_atlas exited; CPU time 18.158191
23:21:23 (2314364): called boinc_finish(0)

</stderr_txt>
]]>

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