Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:47:07 (3271972): wrapper (7.7.26015): starting
22:47:07 (3271972): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 22:47:07] Arguments: --nthreads 4
[2025-06-03 22:47:07] Threads: 4
[2025-06-03 22:47:07] Checking for CVMFS
[2025-06-03 22:47:07] No cvmfs_config command found, will try listing directly
[2025-06-03 22:47:07] CVMFS is ok
[2025-06-03 22:47:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 22:47:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 22:47:07] Further information can be found at the LHC@home message board.
[2025-06-03 22:47:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 22:47:07] Checking for apptainer binary...
[2025-06-03 22:47:07] which: no apptainer in ((null))
[2025-06-03 22:47:07] apptainer is not installed, using version from CVMFS
[2025-06-03 22:47:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 22:47:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-03 22:47:07] apptainer works
[2025-06-03 22:47:07] Set ATHENA_PROC_NUMBER=4
[2025-06-03 22:47:07] Set ATHENA_CORE_NUMBER=4
[2025-06-03 22:47:07] Starting ATLAS job with PandaID=6668989304
[2025-06-03 22:47:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:53:01]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:53:01] 2025-06-04 00:48:54,126 | INFO     | extracted standard info from prmon json
[2025-06-04 02:53:01] 2025-06-04 00:48:54,127 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:53:01] 2025-06-04 00:48:54,127 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:53:01] 2025-06-04 00:48:54,127 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:53:01] 2025-06-04 00:48:54,128 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:53:01] 2025-06-04 00:48:54,133 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:53:01] 2025-06-04 00:48:54,134 | INFO     | sum of square deviations: 4127772278.0
[2025-06-04 02:53:01] 2025-06-04 00:48:54,135 | INFO     | sum of deviations: -33403112.00000205
[2025-06-04 02:53:01] 2025-06-04 00:48:54,136 | INFO     | mean x: 1748990864.0
[2025-06-04 02:53:01] 2025-06-04 00:48:54,136 | INFO     | sufficient remaining disk space (644917231616 B)
[2025-06-04 02:53:01] 2025-06-04 00:48:54,136 | INFO     | mean y: 2350781.540084388
[2025-06-04 02:53:01] 2025-06-04 00:48:54,137 | INFO     | -- intersect: 16504115.053307898
[2025-06-04 02:53:01] 2025-06-04 00:48:54,137 | INFO     | intersect: 16504115.053307898
[2025-06-04 02:53:01] 2025-06-04 00:48:54,137 | INFO     | chi2: 1.52175664988912
[2025-06-04 02:53:01] 2025-06-04 00:48:54,138 | INFO     | sum of square deviations: 3871990738.0
[2025-06-04 02:53:01] 2025-06-04 00:48:54,140 | INFO     | sum of deviations: 161423994.9999987
[2025-06-04 02:53:01] 2025-06-04 00:48:54,140 | INFO     | mean x: 1748990711.5
[2025-06-04 02:53:01] 2025-06-04 00:48:54,140 | INFO     | mean y: 2350897.793103448
[2025-06-04 02:53:01] 2025-06-04 00:48:54,140 | INFO     | -- intersect: -70564841.67327029
[2025-06-04 02:53:01] 2025-06-04 00:48:54,140 | INFO     | intersect: -70564841.67327029
[2025-06-04 02:53:01] 2025-06-04 00:48:54,140 | INFO     | chi2: 1.5220153526166667
[2025-06-04 02:53:01] 2025-06-04 00:48:54,141 | INFO     | current chi2=1.5220153526166667 (change=-0.017000269232635784 %)
[2025-06-04 02:53:01] 2025-06-04 00:48:54,141 | INFO     | right removable region: 231
[2025-06-04 02:53:01] 2025-06-04 00:48:54,141 | INFO     | sum of square deviations: 3871990738.0
[2025-06-04 02:53:01] 2025-06-04 00:48:54,143 | INFO     | sum of deviations: -34403045319.50001
[2025-06-04 02:53:01] 2025-06-04 00:48:54,143 | INFO     | mean x: 1748991016.5
[2025-06-04 02:53:01] 2025-06-04 00:48:54,143 | INFO     | mean y: 2371083.7370689656
[2025-06-04 02:53:01] 2025-06-04 00:48:54,143 | INFO     | -- intersect: 15542340385.1946
[2025-06-04 02:53:01] 2025-06-04 00:48:54,143 | INFO     | intersect: 15542340385.1946
[2025-06-04 02:53:01] 2025-06-04 00:48:54,144 | INFO     | chi2: 0.0694625172690704
[2025-06-04 02:53:01] 2025-06-04 00:48:54,144 | INFO     | current chi2=0.0694625172690704 (change=95.43537284531455 %)
[2025-06-04 02:53:01] 2025-06-04 00:48:54,144 | INFO     | sum of square deviations: 3627000098.0
[2025-06-04 02:53:01] 2025-06-04 00:48:54,144 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 02:53:01] 2025-06-04 00:48:54,146 | INFO     | sum of deviations: -33428413518.999996
[2025-06-04 02:53:01] 2025-06-04 00:48:54,147 | INFO     | mean x: 1748991169.0
[2025-06-04 02:53:01] 2025-06-04 00:48:54,147 | INFO     | mean y: 2370462.5462555066
[2025-06-04 02:53:01] 2025-06-04 00:48:54,147 | INFO     | -- intersect: 16122028157.248419
[2025-06-04 02:53:01] 2025-06-04 00:48:54,147 | INFO     | intersect: 16122028157.248419
[2025-06-04 02:53:01] 2025-06-04 00:48:54,148 | INFO     | chi2: 0.06525955606362523
[2025-06-04 02:53:01] 2025-06-04 00:48:54,148 | INFO     | current chi2=0.06525955606362523 (change=6.050689451930694 %)
[2025-06-04 02:53:01] 2025-06-04 00:48:54,148 | INFO     | left removable region: 20
[2025-06-04 02:53:01] 2025-06-04 00:48:54,148 | INFO     | sum of square deviations: 2912836010.0
[2025-06-04 02:53:01] 2025-06-04 00:48:54,150 | INFO     | sum of deviations: -26744754599.999996
[2025-06-04 02:53:01] 2025-06-04 00:48:54,150 | INFO     | mean x: 1748991291.0
[2025-06-04 02:53:01] 2025-06-04 00:48:54,150 | INFO     | mean y: 2367191.2417061613
[2025-06-04 02:53:01] 2025-06-04 00:48:54,150 | INFO     | -- intersect: 16061061437.929554
[2025-06-04 02:53:01] 2025-06-04 00:48:54,150 | INFO     | intersect: 16061061437.929554
[2025-06-04 02:53:01] 2025-06-04 00:48:54,150 | INFO     | chi2: 0.0617820643978467
[2025-06-04 02:53:01] 2025-06-04 00:48:54,151 | INFO     | -- intersect: 16061061437.929554
[2025-06-04 02:53:01] 2025-06-04 00:48:54,151 | INFO     | current memory leak: -9.18 B/s (using 211 data points, chi2=0.06)
[2025-06-04 02:53:01] 2025-06-04 00:48:54,152 | INFO     | ..............................
[2025-06-04 02:53:01] 2025-06-04 00:48:54,152 | INFO     | . Timing measurements:
[2025-06-04 02:53:01] 2025-06-04 00:48:54,152 | INFO     | . get job = 0 s
[2025-06-04 02:53:01] 2025-06-04 00:48:54,152 | INFO     | . initial setup = 1 s
[2025-06-04 02:53:01] 2025-06-04 00:48:54,152 | INFO     | . payload setup = 7 s
[2025-06-04 02:53:01] 2025-06-04 00:48:54,152 | INFO     | . stage-in = 0 s
[2025-06-04 02:53:01] 2025-06-04 00:48:54,153 | INFO     | . payload execution = 14461 s
[2025-06-04 02:53:01] 2025-06-04 00:48:54,153 | INFO     | . stage-out = 1 s
[2025-06-04 02:53:01] 2025-06-04 00:48:54,153 | INFO     | . log creation = 0 s
[2025-06-04 02:53:01] 2025-06-04 00:48:54,153 | INFO     | ..............................
[2025-06-04 02:53:01] 2025-06-04 00:48:54,190 | INFO     | size of work directory /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6668989304: 2402533 B (within 2537553920 B limit)
[2025-06-04 02:53:01] 2025-06-04 00:48:54,191 | INFO     | pfn file=/scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6668989304/HITS.44871837._091644.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 02:53:01] 2025-06-04 00:48:54,191 | INFO     | total size of present files: 0 B (workdir size: 2402533 B)
[2025-06-04 02:53:01] 2025-06-04 00:48:54,191 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6668989304/HITS.44871837._091644.pool.root.1 since it does not exist
[2025-06-04 02:53:01] 2025-06-04 00:48:54,255 | INFO     | 
[2025-06-04 02:53:01] 2025-06-04 00:48:54,256 | INFO     | job summary report
[2025-06-04 02:53:01] 2025-06-04 00:48:54,256 | INFO     | --------------------------------------------------
[2025-06-04 02:53:01] 2025-06-04 00:48:54,256 | INFO     | PanDA job id: 6668989304
[2025-06-04 02:53:01] 2025-06-04 00:48:54,256 | INFO     | task id: 44871837
[2025-06-04 02:53:01] 2025-06-04 00:48:54,256 | INFO     | errors: (none)
[2025-06-04 02:53:01] 2025-06-04 00:48:54,256 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:53:01] 2025-06-04 00:48:54,256 | INFO     | pilot state: finished 
[2025-06-04 02:53:01] 2025-06-04 00:48:54,256 | INFO     | transexitcode: 0
[2025-06-04 02:53:01] 2025-06-04 00:48:54,256 | INFO     | exeerrorcode: 0
[2025-06-04 02:53:01] 2025-06-04 00:48:54,256 | INFO     | exeerrordiag: 
[2025-06-04 02:53:01] 2025-06-04 00:48:54,256 | INFO     | exitcode: 0
[2025-06-04 02:53:01] 2025-06-04 00:48:54,257 | INFO     | exitmsg: OK
[2025-06-04 02:53:01] 2025-06-04 00:48:54,257 | INFO     | cpuconsumptiontime: 55717 s
[2025-06-04 02:53:01] 2025-06-04 00:48:54,257 | INFO     | nevents: 400
[2025-06-04 02:53:01] 2025-06-04 00:48:54,257 | INFO     | neventsw: 0
[2025-06-04 02:53:01] 2025-06-04 00:48:54,257 | INFO     | pid: 3282857
[2025-06-04 02:53:01] 2025-06-04 00:48:54,257 | INFO     | pgrp: 3282857
[2025-06-04 02:53:01] 2025-06-04 00:48:54,257 | INFO     | corecount: 4
[2025-06-04 02:53:01] 2025-06-04 00:48:54,257 | INFO     | event service: False
[2025-06-04 02:53:01] 2025-06-04 00:48:54,257 | INFO     | sizes: {0: 2405074, 1: 2405273, 6: 2405479, 12: 2405507, 14472: 2435892, 14474: 2445039, 14480: 2445181}
[2025-06-04 02:53:01] 2025-06-04 00:48:54,257 | INFO     | --------------------------------------------------
[2025-06-04 02:53:01] 2025-06-04 00:48:54,257 | INFO     | 
[2025-06-04 02:53:01] 2025-06-04 00:48:54,257 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-06-04 02:53:01] 2025-06-04 00:48:54,281 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:53:01] 2025-06-04 00:48:54,281 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:53:01] 2025-06-04 00:48:54,282 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:53:01] 2025-06-04 00:48:54,282 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:53:01] 2025-06-04 00:48:54,282 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:53:01] 2025-06-04 00:48:54,282 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:53:01] 2025-06-04 00:48:54,282 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:53:01] 2025-06-04 00:48:54,282 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:53:01] 2025-06-04 00:48:54,282 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:53:01] 2025-06-04 00:48:54,282 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:53:01] 2025-06-04 00:48:54,282 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:53:01] 2025-06-04 00:48:54,282 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:53:01] 2025-06-04 00:48:54,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:53:01] 2025-06-04 00:48:54,283 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:53:01] 2025-06-04 00:48:54,283 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:53:01] 2025-06-04 00:48:54,283 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:53:01] 2025-06-04 00:48:54,283 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:53:01] 2025-06-04 00:48:54,283 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:53:01] 2025-06-04 00:48:54,283 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:53:01] 2025-06-04 00:48:54,283 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:53:01] 2025-06-04 00:48:54,283 | INFO     | job 6668989304 has completed (purged errors)
[2025-06-04 02:53:01] 2025-06-04 00:48:54,284 | INFO     | overall cleanup function is called
[2025-06-04 02:53:01] 2025-06-04 00:48:54,635 | INFO     | number of running child processes to parent process 3282857: 1
[2025-06-04 02:53:01] 2025-06-04 00:48:54,636 | INFO     | maximum number of monitored processes: 6
[2025-06-04 02:53:01] 2025-06-04 00:48:54,636 | INFO     | aborting job monitoring since job object (job id=6668989304) has expired
[2025-06-04 02:53:01] 2025-06-04 00:48:55,292 | INFO     | --- collectZombieJob: --- 10, [3282857]
[2025-06-04 02:53:01] 2025-06-04 00:48:55,293 | INFO     | zombie collector waiting for pid 3282857
[2025-06-04 02:53:01] 2025-06-04 00:48:55,293 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:53:01] 2025-06-04 00:48:55,293 | INFO     | collected zombie processes
[2025-06-04 02:53:01] 2025-06-04 00:48:55,293 | INFO     | will attempt to kill all subprocesses of pid=3282857
[2025-06-04 02:53:01] 2025-06-04 00:48:55,669 | INFO     | process IDs to be killed: [3282857] (in reverse order)
[2025-06-04 02:53:01] 2025-06-04 00:48:55,779 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:53:01] 2025-06-04 00:48:55,780 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:53:01] 2025-06-04 00:48:55,792 | INFO     | did not find any defunct processes belonging to 3282857
[2025-06-04 02:53:01] 2025-06-04 00:48:55,804 | INFO     | did not find any defunct processes belonging to 3282857
[2025-06-04 02:53:01] 2025-06-04 00:48:55,804 | INFO     | ready for new job
[2025-06-04 02:53:01] 2025-06-04 00:48:55,805 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:53:01] 2025-06-04 00:48:55,807 | INFO     | **************************************
[2025-06-04 02:53:01] 2025-06-04 00:48:55,807 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:53:01] 2025-06-04 00:48:55,807 | INFO     | **************************************
[2025-06-04 02:53:01] 2025-06-04 00:48:55,807 | INFO     | 
[2025-06-04 02:53:01] 2025-06-04 00:48:55,811 | INFO     | architecture information:
[2025-06-04 02:53:01] 2025-06-04 00:48:55,811 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:53:01] 2025-06-04 00:48:55,826 | INFO     | cat /etc/os-release:
[2025-06-04 02:53:01] NAME="CentOS Linux"
[2025-06-04 02:53:01] VERSION="7 (Core)"
[2025-06-04 02:53:01] ID="centos"
[2025-06-04 02:53:01] ID_LIKE="rhel fedora"
[2025-06-04 02:53:01] VERSION_ID="7"
[2025-06-04 02:53:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:53:01] ANSI_COLOR="0;31"
[2025-06-04 02:53:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:53:01] HOME_URL="https://www.centos.org/"
[2025-06-04 02:53:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:53:01] 
[2025-06-04 02:53:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:53:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:53:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:53:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:53:01] 
[2025-06-04 02:53:01] 2025-06-04 00:48:55,826 | INFO     | **************************************
[2025-06-04 02:53:01] 2025-06-04 00:48:56,329 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-06-04 02:53:01] 2025-06-04 00:48:56,343 | INFO     | sufficient remaining disk space (644920377344 B)
[2025-06-04 02:53:01] 2025-06-04 00:48:56,344 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:53:01] 2025-06-04 00:48:56,344 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:53:01] 2025-06-04 00:48:56,344 | INFO     | update_server=False
[2025-06-04 02:53:01] 2025-06-04 00:48:56,344 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:53:01] 2025-06-04 00:48:56,344 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:53:01] 2025-06-04 00:48:56,345 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:53:01] 2025-06-04 00:48:56,345 | INFO     | aborting loop
[2025-06-04 02:53:01] 2025-06-04 00:48:56,368 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:53:01] 2025-06-04 00:48:56,369 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:53:01] 2025-06-04 00:48:56,369 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:53:01] 2025-06-04 00:48:56,545 | INFO     | all data control threads have been joined
[2025-06-04 02:53:01] 2025-06-04 00:48:56,968 | INFO     | all job control threads have been joined
[2025-06-04 02:53:01] 2025-06-04 00:48:57,348 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:53:01] 2025-06-04 00:48:57,349 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:53:01] 2025-06-04 00:48:57,352 | INFO     | all payload control threads have been joined
[2025-06-04 02:53:01] 2025-06-04 00:48:57,473 | INFO     | [job] validate thread has finished
[2025-06-04 02:53:01] 2025-06-04 00:48:57,551 | INFO     | [data] control thread has finished
[2025-06-04 02:53:01] 2025-06-04 00:48:57,607 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:53:01] 2025-06-04 00:48:57,628 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:53:01] 2025-06-04 00:48:57,942 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:53:01] 2025-06-04 00:48:57,974 | INFO     | [job] control thread has finished
[2025-06-04 02:53:01] 2025-06-04 00:48:58,040 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:53:01] 2025-06-04 00:48:58,349 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:53:01] 2025-06-04 00:48:58,358 | INFO     | [payload] control thread has finished
[2025-06-04 02:53:01] 2025-06-04 00:48:58,464 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:53:01] 2025-06-04 00:48:58,491 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:53:01] 2025-06-04 00:48:58,789 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:53:01] 2025-06-04 00:48:59,261 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:53:01] 2025-06-04 00:49:00,267 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:53:01] 2025-06-04 00:49:02,794 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:53:01] 2025-06-04 00:49:06,987 | INFO     | job.realtimelogging is not enabled
[2025-06-04 02:53:01] 2025-06-04 00:49:07,991 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:53:01] 2025-06-04 00:49:09,697 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22780537157440)>', '<ExcThread(monitor, started 22780097578752)>']
[2025-06-04 02:53:01] 2025-06-04 00:49:10,439 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:53:01] 2025-06-04 00:49:10,439 | INFO     | [monitor] control thread has ended
[2025-06-04 02:53:01] 2025-06-04 00:49:14,723 | INFO     | all workflow threads have been joined
[2025-06-04 02:53:01] 2025-06-04 00:49:14,723 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:53:01] 2025-06-04 00:49:14,723 | INFO     | traces error code: 0
[2025-06-04 02:53:01] 2025-06-04 00:49:14,723 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:53:01] 2025-06-04 00:49:14,857 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:53:01] 2025-06-04 00:49:14,860 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:53:01] 2025-06-04 00:49:14,863 [wrapper] pilotpid: 3275656
[2025-06-04 02:53:01] 2025-06-04 00:49:14,865 [wrapper] Pilot exit status: 0
[2025-06-04 02:53:01] 2025-06-04 00:49:14,875 [wrapper] pandaids: 6668989304
[2025-06-04 02:53:01] 2025-06-04 00:49:14,953 [wrapper] cleanup supervisor_pilot 3653658 3275657
[2025-06-04 02:53:01] 2025-06-04 00:49:14,956 [wrapper] Test setup, not cleaning
[2025-06-04 02:53:01] 2025-06-04 00:49:14,959 [wrapper] apfmon messages muted
[2025-06-04 02:53:01] 2025-06-04 00:49:14,961 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:53:01] 2025-06-04 00:49:14,964 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:53:01]  *** Error codes and diagnostics ***
[2025-06-04 02:53:01]     "exeErrorCode": 0,
[2025-06-04 02:53:01]     "exeErrorDiag": "",
[2025-06-04 02:53:01]     "pilotErrorCode": 0,
[2025-06-04 02:53:01]     "pilotErrorDiag": "",
[2025-06-04 02:53:01]  *** Listing of results directory ***
[2025-06-04 02:53:01] total 417864
[2025-06-04 02:53:01] -rw-r--r-- 1 boinc boinc    495897 May 29 00:52 pilot3.tar.gz
[2025-06-04 02:53:01] -rw-r--r-- 1 boinc boinc      5111 May 29 01:09 queuedata.json
[2025-06-04 02:53:01] -rwx------ 1 boinc boinc     37140 May 29 01:10 runpilot2-wrapper.sh
[2025-06-04 02:53:01] -rw-r--r-- 1 boinc boinc       100 Jun  3 22:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:53:01] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 22:47 run_atlas
[2025-06-04 02:53:01] -rw-r--r-- 1 boinc boinc       105 Jun  3 22:47 job.xml
[2025-06-04 02:53:01] -rw-r--r-- 2 boinc boinc 223023786 Jun  3 22:47 EVNT.44871834._003564.pool.root.1
[2025-06-04 02:53:01] -rw-r--r-- 1 boinc boinc      6632 Jun  3 22:47 init_data.xml
[2025-06-04 02:53:01] drwxrwx--x 2 boinc boinc      4096 Jun  3 22:47 shared
[2025-06-04 02:53:01] -rw-r--r-- 2 boinc boinc    508879 Jun  3 22:47 input.tar.gz
[2025-06-04 02:53:01] -rw-r--r-- 2 boinc boinc     15093 Jun  3 22:47 start_atlas.sh
[2025-06-04 02:53:01] -rw-r--r-- 1 boinc boinc         0 Jun  3 22:47 boinc_lockfile
[2025-06-04 02:53:01] -rw-r--r-- 1 boinc boinc      2559 Jun  3 22:47 pandaJob.out
[2025-06-04 02:53:01] -rw------- 1 boinc boinc    986853 Jun  3 22:47 agis_schedconf.cvmfs.json
[2025-06-04 02:53:01] drwx------ 4 boinc boinc      4096 Jun  3 22:47 pilot3
[2025-06-04 02:53:01] -rw------- 1 boinc boinc 197694359 Jun  4 02:48 HITS.44871837._091644.pool.root.1
[2025-06-04 02:53:01] -rw-r--r-- 1 boinc boinc       529 Jun  4 02:48 boinc_task_state.xml
[2025-06-04 02:53:01] -rw------- 1 boinc boinc        95 Jun  4 02:48 pilot_heartbeat.json
[2025-06-04 02:53:01] -rw------- 1 boinc boinc      1036 Jun  4 02:48 memory_monitor_summary.json
[2025-06-04 02:53:01] -rw------- 1 boinc boinc   1603667 Jun  4 02:48 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:53:01] -rw------- 1 boinc boinc    329288 Jun  4 02:48 log.44871837._091644.job.log.tgz.1
[2025-06-04 02:53:01] -rw------- 1 boinc boinc      7728 Jun  4 02:48 heartbeat.json
[2025-06-04 02:53:01] -rw------- 1 boinc boinc      4435 Jun  4 02:49 pilotlog.txt
[2025-06-04 02:53:01] -rw------- 1 boinc boinc   1337337 Jun  4 02:49 log.44871837._091644.job.log.1
[2025-06-04 02:53:01] -rw------- 1 boinc boinc       357 Jun  4 02:49 output.list
[2025-06-04 02:53:01] -rw-r--r-- 1 boinc boinc       620 Jun  4 02:49 runtime_log
[2025-06-04 02:53:01] -rw------- 1 boinc boinc   1689600 Jun  4 02:49 result.tar.gz
[2025-06-04 02:53:01] -rw------- 1 boinc boinc       665 Jun  4 02:49 uqANDmH6ee7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0GUKDm2zuqUo.diag
[2025-06-04 02:53:01] -rw-r--r-- 1 boinc boinc      9026 Jun  4 02:49 runtime_log.err
[2025-06-04 02:53:01] -rw-r--r-- 1 boinc boinc        26 Jun  4 02:52 wrapper_checkpoint.txt
[2025-06-04 02:53:01] -rw-r--r-- 1 boinc boinc      8192 Jun  4 02:53 boinc_mmap_file
[2025-06-04 02:53:01] -rw-r--r-- 1 boinc boinc     21017 Jun  4 02:53 stderr.txt
[2025-06-04 02:53:01] HITS file was successfully produced:
[2025-06-04 02:53:01] -rw------- 1 boinc boinc 197694359 Jun  4 02:48 shared/HITS.pool.root.1
[2025-06-04 02:53:01]  *** Contents of shared directory: ***
[2025-06-04 02:53:01] total 413036
[2025-06-04 02:53:01] -rw-r--r-- 2 boinc boinc 223023786 Jun  3 22:47 ATLAS.root_0
[2025-06-04 02:53:01] -rw-r--r-- 2 boinc boinc    508879 Jun  3 22:47 input.tar.gz
[2025-06-04 02:53:01] -rw-r--r-- 2 boinc boinc     15093 Jun  3 22:47 start_atlas.sh
[2025-06-04 02:53:01] -rw------- 1 boinc boinc 197694359 Jun  4 02:48 HITS.pool.root.1
[2025-06-04 02:53:01] -rw------- 1 boinc boinc   1689600 Jun  4 02:49 result.tar.gz
02:53:03 (3271972): run_atlas exited; CPU time 56363.681104
02:53:03 (3271972): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN