Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:49:33 (982): wrapper (7.7.26015): starting
20:49:33 (982): wrapper: running run_atlas (--nthreads 8)
[2025-05-29 20:49:33] Arguments: --nthreads 8
[2025-05-29 20:49:33] Threads: 8
[2025-05-29 20:49:33] Checking for CVMFS
[2025-05-29 20:49:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-29 20:49:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-29 20:49:34] Running cvmfs_config stat atlas.cern.ch
[2025-05-29 20:49:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-29 20:49:35] 2.11.2.0 11048 24999 96144 146572 1 60 22831554 25165825 4644 130560 0 13625750 99.751 14937409 5038 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-05-29 20:49:35] CVMFS is ok
[2025-05-29 20:49:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-29 20:49:35] Checking for apptainer binary...
[2025-05-29 20:49:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-29 20:49:35] Running /usr/bin/apptainer --version
[2025-05-29 20:49:35] apptainer version 1.3.2-1.el7
[2025-05-29 20:49:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-29 20:49:42] cg-vwn330.simple-grid.lan
[2025-05-29 20:49:42] apptainer works
[2025-05-29 20:49:42] Set ATHENA_PROC_NUMBER=8
[2025-05-29 20:49:42] Set ATHENA_CORE_NUMBER=8
[2025-05-29 20:49:42] Starting ATLAS job with PandaID=6668989158
[2025-05-29 20:49:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-30 02:27:37]  *** The last 200 lines of the pilot log: ***
[2025-05-30 02:27:37] 2025-05-30 00:06:48,624 | INFO     | extracted standard memory fields from prmon json
[2025-05-30 02:27:37] 2025-05-30 00:06:48,624 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-30 02:27:37] 2025-05-30 00:06:48,624 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-30 02:27:37] 2025-05-30 00:06:48,624 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-30 02:27:37] 2025-05-30 00:06:48,630 | INFO     | fitting pss+swap vs Time
[2025-05-30 02:27:37] 2025-05-30 00:06:48,631 | INFO     | sum of square deviations: 8288713550.0
[2025-05-30 02:27:37] 2025-05-30 00:06:48,634 | INFO     | sum of deviations: 148171483980.99994
[2025-05-30 02:27:37] 2025-05-30 00:06:48,634 | INFO     | mean x: 1748554391.0
[2025-05-30 02:27:37] 2025-05-30 00:06:48,634 | INFO     | mean y: 2435297.785953177
[2025-05-30 02:27:37] 2025-05-30 00:06:48,634 | INFO     | -- intersect: -31255237846.91617
[2025-05-30 02:27:37] 2025-05-30 00:06:48,635 | INFO     | intersect: -31255237846.91617
[2025-05-30 02:27:37] 2025-05-30 00:06:48,635 | INFO     | chi2: 6.510385243528789
[2025-05-30 02:27:37] 2025-05-30 00:06:48,636 | INFO     | sum of square deviations: 7879803557.5
[2025-05-30 02:27:37] 2025-05-30 00:06:48,646 | INFO     | sum of deviations: 164951904929.0
[2025-05-30 02:27:37] 2025-05-30 00:06:48,646 | INFO     | mean x: 1748554238.5
[2025-05-30 02:27:37] 2025-05-30 00:06:48,646 | INFO     | mean y: 2441455.714285714
[2025-05-30 02:27:37] 2025-05-30 00:06:48,646 | INFO     | -- intersect: -36600926941.42383
[2025-05-30 02:27:37] 2025-05-30 00:06:48,646 | INFO     | intersect: -36600926941.42383
[2025-05-30 02:27:37] 2025-05-30 00:06:48,647 | INFO     | chi2: 5.7763028373235
[2025-05-30 02:27:37] 2025-05-30 00:06:48,647 | INFO     | current chi2=5.7763028373235 (change=11.27556018186411 %)
[2025-05-30 02:27:37] 2025-05-30 00:06:48,647 | INFO     | right removable region: 293
[2025-05-30 02:27:37] 2025-05-30 00:06:48,647 | INFO     | sum of square deviations: 7879803557.5
[2025-05-30 02:27:37] 2025-05-30 00:06:48,650 | INFO     | sum of deviations: 47361553235.50001
[2025-05-30 02:27:37] 2025-05-30 00:06:48,651 | INFO     | mean x: 1748554543.5
[2025-05-30 02:27:37] 2025-05-30 00:06:48,651 | INFO     | mean y: 2472867.3027210883
[2025-05-30 02:27:37] 2025-05-30 00:06:48,651 | INFO     | -- intersect: -10507212874.587128
[2025-05-30 02:27:37] 2025-05-30 00:06:48,651 | INFO     | intersect: -10507212874.587128
[2025-05-30 02:27:37] 2025-05-30 00:06:48,651 | INFO     | chi2: 2.0626130374985987
[2025-05-30 02:27:37] 2025-05-30 00:06:48,651 | INFO     | current chi2=2.0626130374985987 (change=68.31811082840603 %)
[2025-05-30 02:27:37] 2025-05-30 00:06:48,652 | INFO     | sum of square deviations: 7484568240.0
[2025-05-30 02:27:37] 2025-05-30 00:06:48,655 | INFO     | sum of deviations: -1611297859.0000038
[2025-05-30 02:27:37] 2025-05-30 00:06:48,655 | INFO     | mean x: 1748554696.0
[2025-05-30 02:27:37] 2025-05-30 00:06:48,655 | INFO     | mean y: 2491666.6955017303
[2025-05-30 02:27:37] 2025-05-30 00:06:48,655 | INFO     | -- intersect: 378925196.01411515
[2025-05-30 02:27:37] 2025-05-30 00:06:48,655 | INFO     | intersect: 378925196.01411515
[2025-05-30 02:27:37] 2025-05-30 00:06:48,656 | INFO     | chi2: 0.8022162372191161
[2025-05-30 02:27:37] 2025-05-30 00:06:48,656 | INFO     | current chi2=0.8022162372191161 (change=61.10679886945779 %)
[2025-05-30 02:27:37] 2025-05-30 00:06:48,664 | INFO     | sum of square deviations: 7102775035.0
[2025-05-30 02:27:37] 2025-05-30 00:06:48,667 | INFO     | sum of deviations: -2702304757.999998
[2025-05-30 02:27:37] 2025-05-30 00:06:48,667 | INFO     | mean x: 1748554848.5
[2025-05-30 02:27:37] 2025-05-30 00:06:48,668 | INFO     | mean y: 2492097.1690140846
[2025-05-30 02:27:37] 2025-05-30 00:06:48,668 | INFO     | -- intersect: 667743081.951966
[2025-05-30 02:27:37] 2025-05-30 00:06:48,668 | INFO     | intersect: 667743081.951966
[2025-05-30 02:27:37] 2025-05-30 00:06:48,668 | INFO     | chi2: 0.7925317619037087
[2025-05-30 02:27:37] 2025-05-30 00:06:48,668 | INFO     | current chi2=0.7925317619037087 (change=1.2072150707119371 %)
[2025-05-30 02:27:37] 2025-05-30 00:06:48,668 | INFO     | left removable region: 30
[2025-05-30 02:27:37] 2025-05-30 00:06:48,669 | INFO     | sum of square deviations: 5640782972.0
[2025-05-30 02:27:37] 2025-05-30 00:06:48,671 | INFO     | sum of deviations: 8968449665.0
[2025-05-30 02:27:37] 2025-05-30 00:06:48,671 | INFO     | mean x: 1748555123.0
[2025-05-30 02:27:37] 2025-05-30 00:06:48,672 | INFO     | mean y: 2502476.5589353614
[2025-05-30 02:27:37] 2025-05-30 00:06:48,672 | INFO     | -- intersect: -2777577644.4004474
[2025-05-30 02:27:37] 2025-05-30 00:06:48,672 | INFO     | intersect: -2777577644.4004474
[2025-05-30 02:27:37] 2025-05-30 00:06:48,672 | INFO     | chi2: 0.0009946445737857186
[2025-05-30 02:27:37] 2025-05-30 00:06:48,672 | INFO     | -- intersect: -2777577644.4004474
[2025-05-30 02:27:37] 2025-05-30 00:06:48,673 | INFO     | current memory leak: 1.59 B/s (using 263 data points, chi2=0.00)
[2025-05-30 02:27:37] 2025-05-30 00:06:48,673 | INFO     | ..............................
[2025-05-30 02:27:37] 2025-05-30 00:06:48,673 | INFO     | . Timing measurements:
[2025-05-30 02:27:37] 2025-05-30 00:06:48,674 | INFO     | . get job = 0 s
[2025-05-30 02:27:37] 2025-05-30 00:06:48,674 | INFO     | . initial setup = 8 s
[2025-05-30 02:27:37] 2025-05-30 00:06:48,674 | INFO     | . payload setup = 173 s
[2025-05-30 02:27:37] 2025-05-30 00:06:48,674 | INFO     | . stage-in = 0 s
[2025-05-30 02:27:37] 2025-05-30 00:06:48,674 | INFO     | . payload execution = 18349 s
[2025-05-30 02:27:37] 2025-05-30 00:06:48,674 | INFO     | . stage-out = 3 s
[2025-05-30 02:27:37] 2025-05-30 00:06:48,674 | INFO     | . log creation = 1 s
[2025-05-30 02:27:37] 2025-05-30 00:06:48,674 | INFO     | ..............................
[2025-05-30 02:27:37] 2025-05-30 00:06:48,807 | INFO     | 
[2025-05-30 02:27:37] 2025-05-30 00:06:48,807 | INFO     | job summary report
[2025-05-30 02:27:37] 2025-05-30 00:06:48,807 | INFO     | --------------------------------------------------
[2025-05-30 02:27:37] 2025-05-30 00:06:48,807 | INFO     | PanDA job id: 6668989158
[2025-05-30 02:27:37] 2025-05-30 00:06:48,807 | INFO     | task id: 44871837
[2025-05-30 02:27:37] 2025-05-30 00:06:48,807 | INFO     | errors: (none)
[2025-05-30 02:27:37] 2025-05-30 00:06:48,808 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-30 02:27:37] 2025-05-30 00:06:48,808 | INFO     | pilot state: finished 
[2025-05-30 02:27:37] 2025-05-30 00:06:48,808 | INFO     | transexitcode: 0
[2025-05-30 02:27:37] 2025-05-30 00:06:48,808 | INFO     | exeerrorcode: 0
[2025-05-30 02:27:37] 2025-05-30 00:06:48,808 | INFO     | exeerrordiag: 
[2025-05-30 02:27:37] 2025-05-30 00:06:48,808 | INFO     | exitcode: 0
[2025-05-30 02:27:37] 2025-05-30 00:06:48,808 | INFO     | exitmsg: OK
[2025-05-30 02:27:37] 2025-05-30 00:06:48,808 | INFO     | cpuconsumptiontime: 69452 s
[2025-05-30 02:27:37] 2025-05-30 00:06:48,808 | INFO     | nevents: 400
[2025-05-30 02:27:37] 2025-05-30 00:06:48,808 | INFO     | neventsw: 0
[2025-05-30 02:27:37] 2025-05-30 00:06:48,809 | INFO     | pid: 14854
[2025-05-30 02:27:37] 2025-05-30 00:06:48,809 | INFO     | pgrp: 14854
[2025-05-30 02:27:37] 2025-05-30 00:06:48,809 | INFO     | corecount: 8
[2025-05-30 02:27:37] 2025-05-30 00:06:48,809 | INFO     | event service: False
[2025-05-30 02:27:37] 2025-05-30 00:06:48,809 | INFO     | sizes: {0: 2404406, 1: 2405262, 2: 2405290, 12: 2405290, 23: 2405318, 34: 2405346, 45: 2405502, 55: 2405530, 66: 2405558, 77: 2405586, 87: 2405642, 94: 2406156, 98
[2025-05-30 02:27:37] 2025-05-30 00:06:48,809 | INFO     | --------------------------------------------------
[2025-05-30 02:27:37] 2025-05-30 00:06:48,809 | INFO     | 
[2025-05-30 02:27:37] 2025-05-30 00:06:48,809 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-05-30 02:27:37] 2025-05-30 00:06:49,280 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-30 02:27:37] 2025-05-30 00:06:49,280 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-30 02:27:37] 2025-05-30 00:06:49,280 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-30 02:27:37] 2025-05-30 00:06:49,280 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-30 02:27:37] 2025-05-30 00:06:49,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-30 02:27:37] 2025-05-30 00:06:49,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-30 02:27:37] 2025-05-30 00:06:49,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-30 02:27:37] 2025-05-30 00:06:49,280 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-30 02:27:37] 2025-05-30 00:06:49,281 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-30 02:27:37] 2025-05-30 00:06:49,281 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-30 02:27:37] 2025-05-30 00:06:49,281 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-30 02:27:37] 2025-05-30 00:06:49,281 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-30 02:27:37] 2025-05-30 00:06:49,281 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-30 02:27:37] 2025-05-30 00:06:49,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-30 02:27:37] 2025-05-30 00:06:49,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-30 02:27:37] 2025-05-30 00:06:49,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-30 02:27:37] 2025-05-30 00:06:49,281 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-30 02:27:37] 2025-05-30 00:06:49,281 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-30 02:27:37] 2025-05-30 00:06:49,282 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-30 02:27:37] 2025-05-30 00:06:49,282 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-30 02:27:37] 2025-05-30 00:06:49,282 | INFO     | job 6668989158 has completed (purged errors)
[2025-05-30 02:27:37] 2025-05-30 00:06:49,282 | INFO     | overall cleanup function is called
[2025-05-30 02:27:37] 2025-05-30 00:06:50,291 | INFO     | --- collectZombieJob: --- 10, [14854]
[2025-05-30 02:27:37] 2025-05-30 00:06:50,291 | INFO     | zombie collector waiting for pid 14854
[2025-05-30 02:27:37] 2025-05-30 00:06:50,292 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-30 02:27:37] 2025-05-30 00:06:50,292 | INFO     | collected zombie processes
[2025-05-30 02:27:37] 2025-05-30 00:06:50,292 | INFO     | will attempt to kill all subprocesses of pid=14854
[2025-05-30 02:27:37] 2025-05-30 00:06:50,413 | INFO     | process IDs to be killed: [14854] (in reverse order)
[2025-05-30 02:27:37] 2025-05-30 00:06:51,237 | WARNING  | found no corresponding commands to process id(s)
[2025-05-30 02:27:37] 2025-05-30 00:06:51,237 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-30 02:27:37] 2025-05-30 00:06:51,245 | INFO     | did not find any defunct processes belonging to 14854
[2025-05-30 02:27:37] 2025-05-30 00:06:51,252 | INFO     | did not find any defunct processes belonging to 14854
[2025-05-30 02:27:37] 2025-05-30 00:06:51,252 | INFO     | ready for new job
[2025-05-30 02:27:37] 2025-05-30 00:06:51,252 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-30 02:27:37] 2025-05-30 00:06:51,254 | INFO     | **************************************
[2025-05-30 02:27:37] 2025-05-30 00:06:51,254 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-30 02:27:37] 2025-05-30 00:06:51,255 | INFO     | **************************************
[2025-05-30 02:27:37] 2025-05-30 00:06:51,255 | INFO     | 
[2025-05-30 02:27:37] 2025-05-30 00:06:51,255 | INFO     | pilot is running in a VM
[2025-05-30 02:27:37] 2025-05-30 00:06:51,255 | INFO     | architecture information:
[2025-05-30 02:27:37] 2025-05-30 00:06:51,258 | INFO     | executing command: cat /etc/os-release
[2025-05-30 02:27:37] 2025-05-30 00:06:51,437 | INFO     | cat /etc/os-release:
[2025-05-30 02:27:37] NAME="CentOS Linux"
[2025-05-30 02:27:37] VERSION="7 (Core)"
[2025-05-30 02:27:37] ID="centos"
[2025-05-30 02:27:37] ID_LIKE="rhel fedora"
[2025-05-30 02:27:37] VERSION_ID="7"
[2025-05-30 02:27:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-30 02:27:37] ANSI_COLOR="0;31"
[2025-05-30 02:27:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-30 02:27:37] HOME_URL="https://www.centos.org/"
[2025-05-30 02:27:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-30 02:27:37] 
[2025-05-30 02:27:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-30 02:27:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-30 02:27:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-30 02:27:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-30 02:27:37] 
[2025-05-30 02:27:37] 2025-05-30 00:06:51,438 | INFO     | **************************************
[2025-05-30 02:27:37] 2025-05-30 00:06:51,941 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-05-30 02:27:37] 2025-05-30 00:06:52,147 | INFO     | sufficient remaining disk space (495320039424 B)
[2025-05-30 02:27:37] 2025-05-30 00:06:52,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-30 02:27:37] 2025-05-30 00:06:52,148 | INFO     | current server update state: UPDATING_FINAL
[2025-05-30 02:27:37] 2025-05-30 00:06:52,148 | INFO     | update_server=False
[2025-05-30 02:27:37] 2025-05-30 00:06:52,148 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-30 02:27:37] 2025-05-30 00:06:52,449 | INFO     | all payload control threads have been joined
[2025-05-30 02:27:37] 2025-05-30 00:06:52,450 | INFO     | found 0 job(s) in 20 queues
[2025-05-30 02:27:37] 2025-05-30 00:06:52,451 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-30 02:27:37] 2025-05-30 00:06:52,451 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-30 02:27:37] 2025-05-30 00:06:52,630 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-05-30 02:27:37] 2025-05-30 00:06:52,630 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-05-30 02:27:37] 2025-05-30 00:06:52,631 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-30 02:27:37] 2025-05-30 00:06:52,631 | INFO     | will abort loop
[2025-05-30 02:27:37] 2025-05-30 00:06:52,869 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-30 02:27:37] 2025-05-30 00:06:53,065 | INFO     | all data control threads have been joined
[2025-05-30 02:27:37] 2025-05-30 00:06:53,066 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-30 02:27:37] 2025-05-30 00:06:53,153 | INFO     | [job] retrieve thread has finished
[2025-05-30 02:27:37] 2025-05-30 00:06:53,193 | INFO     | [payload] validate_post thread has finished
[2025-05-30 02:27:37] 2025-05-30 00:06:53,340 | INFO     | all job control threads have been joined
[2025-05-30 02:27:37] 2025-05-30 00:06:53,356 | INFO     | [job] create_data_payload thread has finished
[2025-05-30 02:27:37] 2025-05-30 00:06:53,455 | INFO     | [payload] control thread has finished
[2025-05-30 02:27:37] 2025-05-30 00:06:53,473 | INFO     | [payload] execute_payloads thread has finished
[2025-05-30 02:27:37] 2025-05-30 00:06:53,637 | INFO     | [job] job monitor thread has finished
[2025-05-30 02:27:37] 2025-05-30 00:06:53,821 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-30 02:27:37] 2025-05-30 00:06:53,952 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-30 02:27:37] 2025-05-30 00:06:54,071 | INFO     | [data] control thread has finished
[2025-05-30 02:27:37] 2025-05-30 00:06:54,346 | INFO     | [job] control thread has finished
[2025-05-30 02:27:37] 2025-05-30 00:06:54,478 | INFO     | [job] validate thread has finished
[2025-05-30 02:27:37] 2025-05-30 00:06:54,595 | INFO     | [data] copytool_in thread has finished
[2025-05-30 02:27:37] 2025-05-30 00:06:54,622 | INFO     | [payload] validate_pre thread has finished
[2025-05-30 02:27:37] 2025-05-30 00:06:54,745 | INFO     | [payload] failed_post thread has finished
[2025-05-30 02:27:37] 2025-05-30 00:06:54,827 | INFO     | [job] queue monitor thread has finished
[2025-05-30 02:27:37] 2025-05-30 00:06:54,876 | INFO     | [data] copytool_out thread has finished
[2025-05-30 02:27:37] 2025-05-30 00:06:57,075 | INFO     | [data] queue_monitor thread has finished
[2025-05-30 02:27:37] 2025-05-30 00:06:57,819 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139915913955136)>', '<ExcThread(monitor, started 139915687057152)>']
[2025-05-30 02:27:37] 2025-05-30 00:06:58,489 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-30 02:27:37] 2025-05-30 00:06:58,489 | INFO     | [monitor] control thread has ended
[2025-05-30 02:27:37] 2025-05-30 00:07:02,845 | INFO     | all workflow threads have been joined
[2025-05-30 02:27:37] 2025-05-30 00:07:02,845 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-30 02:27:37] 2025-05-30 00:07:02,846 | INFO     | traces error code: 0
[2025-05-30 02:27:37] 2025-05-30 00:07:02,846 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-30 02:27:37] 2025-05-30 00:07:03,136 [wrapper] ==== pilot stdout END ====
[2025-05-30 02:27:37] 2025-05-30 00:07:03,226 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-30 02:27:37] 2025-05-30 00:07:03,310 [wrapper] pilotpid: 6976
[2025-05-30 02:27:37] 2025-05-30 00:07:03,421 [wrapper] Pilot exit status: 0
[2025-05-30 02:27:37] 2025-05-30 00:07:03,581 [wrapper] pandaids: 6668989158
[2025-05-30 02:27:37] 2025-05-30 00:07:03,622 [wrapper] cleanup supervisor_pilot 32360 6977
[2025-05-30 02:27:37] 2025-05-30 00:07:03,668 [wrapper] Test setup, not cleaning
[2025-05-30 02:27:37] 2025-05-30 00:07:03,775 [wrapper] apfmon messages muted
[2025-05-30 02:27:37] 2025-05-30 00:07:03,854 [wrapper] ==== wrapper stdout END ====
[2025-05-30 02:27:37] 2025-05-30 00:07:03,977 [wrapper] ==== wrapper stderr END ====
[2025-05-30 02:27:37]  *** Error codes and diagnostics ***
[2025-05-30 02:27:37]     "exeErrorCode": 0,
[2025-05-30 02:27:37]     "exeErrorDiag": "",
[2025-05-30 02:27:37]     "pilotErrorCode": 0,
[2025-05-30 02:27:37]     "pilotErrorDiag": "",
[2025-05-30 02:27:37]  *** Listing of results directory ***
[2025-05-30 02:27:37] total 415728
[2025-05-30 02:27:37] -rw-r--r--. 1 boinc boinc    495897 May 29 00:52 pilot3.tar.gz
[2025-05-30 02:27:37] -rw-r--r--. 1 boinc boinc      5111 May 29 01:00 queuedata.json
[2025-05-30 02:27:37] -rwx------. 1 boinc boinc     37140 May 29 01:01 runpilot2-wrapper.sh
[2025-05-30 02:27:37] -rw-r--r--. 1 boinc boinc       100 May 29 20:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-30 02:27:37] -rwxr-xr-x. 1 boinc boinc      7986 May 29 20:49 run_atlas
[2025-05-30 02:27:37] -rw-r--r--. 1 boinc boinc       105 May 29 20:49 job.xml
[2025-05-30 02:27:37] -rw-r--r--. 2 boinc boinc 223120859 May 29 20:49 EVNT.44871834._003558.pool.root.1
[2025-05-30 02:27:37] -rw-r--r--. 2 boinc boinc     15093 May 29 20:49 start_atlas.sh
[2025-05-30 02:27:37] drwxrwx--x. 2 boinc boinc        68 May 29 20:49 shared
[2025-05-30 02:27:37] -rw-r--r--. 2 boinc boinc    508882 May 29 20:49 input.tar.gz
[2025-05-30 02:27:37] -rw-r--r--. 1 boinc boinc      6370 May 29 20:49 init_data.xml
[2025-05-30 02:27:37] -rw-r--r--. 1 boinc boinc         0 May 29 20:49 boinc_lockfile
[2025-05-30 02:27:37] -rw-r--r--. 1 boinc boinc      2559 May 29 20:49 pandaJob.out
[2025-05-30 02:27:37] -rw-------. 1 boinc boinc    992706 May 29 20:52 agis_schedconf.cvmfs.json
[2025-05-30 02:27:37] drwx------. 4 boinc boinc      4096 May 29 20:53 pilot3
[2025-05-30 02:27:37] -rw-------. 1 boinc boinc 194693653 May 30 02:03 HITS.44871837._091498.pool.root.1
[2025-05-30 02:27:37] -rw-r--r--. 1 boinc boinc       531 May 30 02:03 boinc_task_state.xml
[2025-05-30 02:27:37] -rw-------. 1 boinc boinc      1014 May 30 02:04 memory_monitor_summary.json
[2025-05-30 02:27:37] -rw-------. 1 boinc boinc   1603667 May 30 02:05 agis_ddmendpoints.agis.ALL.json
[2025-05-30 02:27:37] -rw-------. 1 boinc boinc    422475 May 30 02:05 log.44871837._091498.job.log.tgz.1
[2025-05-30 02:27:37] -rw-------. 1 boinc boinc        95 May 30 02:06 pilot_heartbeat.json
[2025-05-30 02:27:37] -rw-------. 1 boinc boinc      7687 May 30 02:06 heartbeat.json
[2025-05-30 02:27:37] -rw-------. 1 boinc boinc      4602 May 30 02:07 pilotlog.txt
[2025-05-30 02:27:37] -rw-------. 1 boinc boinc   1609390 May 30 02:07 log.44871837._091498.job.log.1
[2025-05-30 02:27:37] -rw-------. 1 boinc boinc       357 May 30 02:07 output.list
[2025-05-30 02:27:37] -rw-r--r--. 1 boinc boinc       620 May 30 02:07 runtime_log
[2025-05-30 02:27:37] -rw-------. 1 boinc boinc   2048000 May 30 02:07 result.tar.gz
[2025-05-30 02:27:37] -rw-------. 1 boinc boinc       657 May 30 02:07 scBNDmLxee7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3EdKDmIzaEKm.diag
[2025-05-30 02:27:37] -rw-r--r--. 1 boinc boinc      8659 May 30 02:07 runtime_log.err
[2025-05-30 02:27:37] -rw-r--r--. 1 boinc boinc      8192 May 30 02:27 boinc_mmap_file
[2025-05-30 02:27:37] -rw-r--r--. 1 boinc boinc        28 May 30 02:27 wrapper_checkpoint.txt
[2025-05-30 02:27:37] -rw-r--r--. 1 boinc boinc     20493 May 30 02:27 stderr.txt
[2025-05-30 02:27:37] HITS file was successfully produced:
[2025-05-30 02:27:37] -rw-------. 1 boinc boinc 194693653 May 30 02:03 shared/HITS.pool.root.1
[2025-05-30 02:27:37]  *** Contents of shared directory: ***
[2025-05-30 02:27:37] total 410540
[2025-05-30 02:27:37] -rw-r--r--. 2 boinc boinc 223120859 May 29 20:49 ATLAS.root_0
[2025-05-30 02:27:37] -rw-r--r--. 2 boinc boinc     15093 May 29 20:49 start_atlas.sh
[2025-05-30 02:27:37] -rw-r--r--. 2 boinc boinc    508882 May 29 20:49 input.tar.gz
[2025-05-30 02:27:37] -rw-------. 1 boinc boinc 194693653 May 30 02:03 HITS.pool.root.1
[2025-05-30 02:27:37] -rw-------. 1 boinc boinc   2048000 May 30 02:07 result.tar.gz
02:27:39 (982): run_atlas exited; CPU time 69711.506118
02:27:39 (982): called boinc_finish(0)

</stderr_txt>
]]>

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