Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:50:53 (445884): wrapper (7.7.26015): starting
22:50:53 (445884): wrapper: running run_atlas (--nthreads 12)
[2025-05-28 22:50:53] Arguments: --nthreads 12
[2025-05-28 22:50:53] Threads: 12
[2025-05-28 22:50:53] Checking for CVMFS
[2025-05-28 22:50:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 22:50:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 22:50:53] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 22:50:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 22:50:54] 2.11.5.0 1945924 14861 211912 146544 0 454 27708158 45568001 14063 130560 0 151231702 99.784 100684336 26521 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-28 22:50:54] CVMFS is ok
[2025-05-28 22:50:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 22:50:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 22:50:54] Further information can be found at the LHC@home message board.
[2025-05-28 22:50:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 22:50:54] Checking for apptainer binary...
[2025-05-28 22:50:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 22:50:54] Running /usr/bin/apptainer --version
[2025-05-28 22:50:54] apptainer version 1.4.0-1.el9
[2025-05-28 22:50:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 22:50:54] wns0096.triumf.lcg
[2025-05-28 22:50:54] apptainer works
[2025-05-28 22:50:54] Set ATHENA_PROC_NUMBER=12
[2025-05-28 22:50:54] Set ATHENA_CORE_NUMBER=12
[2025-05-28 22:50:54] Starting ATLAS job with PandaID=6669134759
[2025-05-28 22:50:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 22:53:54]  *** The last 200 lines of the pilot log: ***
[2025-05-28 22:53:54] 2025-05-29 05:53:40,384 | INFO     | extracted standard info from prmon json
[2025-05-28 22:53:54] 2025-05-29 05:53:40,384 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 22:53:54] 2025-05-29 05:53:40,384 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 22:53:54] 2025-05-29 05:53:40,384 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 22:53:54] 2025-05-29 05:53:40,384 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 22:53:54] 2025-05-29 05:53:40,385 | WARNING  | found no stored workdir sizes
[2025-05-28 22:53:54] 2025-05-29 05:53:40,385 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 22:53:54] 2025-05-29 05:53:40,385 | WARNING  | wrong length of table data, x=[1748497885.0], y=[1446.0] (must be same and length>=4)
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | ..............................
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . Timing measurements:
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . get job = 0 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . initial setup = 2 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . payload setup = 4 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . stage-in = 0 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . payload execution = 14 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . stage-out = 0 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . log creation = 0 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | ..............................
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669134759/pilotlog.txt
[2025-05-28 22:53:54] 2025-05-29 05:53:40,396 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-28 22:53:54] - Log from pilotlog.txt -
[2025-05-28 22:53:54] 2025-05-29 05:53:40,384 | INFO     | extracted standard info from prmon json
[2025-05-28 22:53:54] 2025-05-29 05:53:40,384 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 22:53:54] 2025-05-29 05:53:40,384 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 22:53:54] 2025-05-29 05:53:40,384 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 22:53:54] 2025-05-29 05:53:40,384 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 22:53:54] 2025-05-29 05:53:40,385 | WARNING  | found no stored workdir sizes
[2025-05-28 22:53:54] 2025-05-29 05:53:40,385 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 22:53:54] 2025-05-29 05:53:40,385 | WARNING  | wrong length of table data, x=[1748497885.0], y=[1446.0] (must be same and length>=4)
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | ..............................
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . Timing measurements:
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . get job = 0 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . initial setup = 2 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . payload setup = 4 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . stage-in = 0 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . payload execution = 14 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . stage-out = 0 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . log creation = 0 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | ..............................
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669134759/pilotlog.txt
[2025-05-28 22:53:54] 2025-05-29 05:53:40,396 | WARNING  | 
[2025-05-28 22:53:54] [begin log extracts]
[2025-05-28 22:53:54] - Log from pilotlog.txt -
[2025-05-28 22:53:54] 2025-05-29 05:53:40,384 | INFO     | extracted standard info from prmon json
[2025-05-28 22:53:54] 2025-05-29 05:53:40,384 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 22:53:54] 2025-05-29 05:53:40,384 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 22:53:54] 2025-05-29 05:53:40,384 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 22:53:54] 2025-05-29 05:53:40,384 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 22:53:54] 2025-05-29 05:53:40,385 | WARNING  | found no stored workdir sizes
[2025-05-28 22:53:54] 2025-05-29 05:53:40,385 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 22:53:54] 2025-05-29 05:53:40,385 | WARNING  | wrong length of table data, x=[1748497885.0], y=[1446.0] (must be same and length>=4)
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | ..............................
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . Timing measurements:
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . get job = 0 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . initial setup = 2 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . payload setup = 4 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . stage-in = 0 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . payload execution = 14 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . stage-out = 0 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | . log creation = 0 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | ..............................
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 22:53:54] 2025-05-29 05:53:40,386 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669134759/pilotlog.txt
[2025-05-28 22:53:54] [end log extracts]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,397 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-28 22:53:54] 2025-05-29 05:53:40,398 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-28 22:53:54] 2025-05-29 05:53:40,763 | INFO     | 
[2025-05-28 22:53:54] 2025-05-29 05:53:40,764 | INFO     | job summary report
[2025-05-28 22:53:54] 2025-05-29 05:53:40,764 | INFO     | --------------------------------------------------
[2025-05-28 22:53:54] 2025-05-29 05:53:40,764 | INFO     | PanDA job id: 6669134759
[2025-05-28 22:53:54] 2025-05-29 05:53:40,764 | INFO     | task id: 44871837
[2025-05-28 22:53:54] 2025-05-29 05:53:40,764 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-28 22:51:32,431 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-28 22:53:54] 2025-05-29 05:53:40,764 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 22:53:54] 2025-05-29 05:53:40,764 | INFO     | pilot state: failed 
[2025-05-28 22:53:54] 2025-05-29 05:53:40,764 | INFO     | transexitcode: 65
[2025-05-28 22:53:54] 2025-05-29 05:53:40,764 | INFO     | exeerrorcode: 65
[2025-05-28 22:53:54] 2025-05-29 05:53:40,764 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 22:53:54] 2025-05-29 05:53:40,764 | INFO     | exitcode: 65
[2025-05-28 22:53:54] 2025-05-29 05:53:40,764 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 22:53:54] 2025-05-29 05:53:40,764 | INFO     | cpuconsumptiontime: 17 s
[2025-05-28 22:53:54] 2025-05-29 05:53:40,764 | INFO     | nevents: 0
[2025-05-28 22:53:54] 2025-05-29 05:53:40,764 | INFO     | neventsw: 0
[2025-05-28 22:53:54] 2025-05-29 05:53:40,764 | INFO     | pid: 455744
[2025-05-28 22:53:54] 2025-05-29 05:53:40,765 | INFO     | pgrp: 455744
[2025-05-28 22:53:54] 2025-05-29 05:53:40,765 | INFO     | corecount: 12
[2025-05-28 22:53:54] 2025-05-29 05:53:40,765 | INFO     | event service: False
[2025-05-28 22:53:54] 2025-05-29 05:53:40,765 | INFO     | sizes: {0: 2405225, 3: 2405431, 11: 2405459, 22: 2432847, 24: 2432847, 143: 2432989}
[2025-05-28 22:53:54] 2025-05-29 05:53:40,765 | INFO     | --------------------------------------------------
[2025-05-28 22:53:54] 2025-05-29 05:53:40,765 | INFO     | 
[2025-05-28 22:53:54] 2025-05-29 05:53:40,765 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-28 22:53:54] 2025-05-29 05:53:40,778 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,778 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,779 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,779 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,779 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,779 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,779 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,779 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,779 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,779 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,779 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,779 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 22:53:54] 2025-05-29 05:53:40,779 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,779 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 22:53:54] 2025-05-29 05:53:40,780 | INFO     | job 6669134759 has completed (purged errors)
[2025-05-28 22:53:54] 2025-05-29 05:53:40,780 | INFO     | overall cleanup function is called
[2025-05-28 22:53:54] 2025-05-29 05:53:41,785 | INFO     | --- collectZombieJob: --- 10, [455744]
[2025-05-28 22:53:54] 2025-05-29 05:53:41,785 | INFO     | zombie collector waiting for pid 455744
[2025-05-28 22:53:54] 2025-05-29 05:53:41,785 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 22:53:54] 2025-05-29 05:53:41,786 | INFO     | collected zombie processes
[2025-05-28 22:53:54] 2025-05-29 05:53:41,786 | INFO     | will attempt to kill all subprocesses of pid=455744
[2025-05-28 22:53:54] 2025-05-29 05:53:41,926 | INFO     | process IDs to be killed: [455744] (in reverse order)
[2025-05-28 22:53:54] 2025-05-29 05:53:41,984 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 22:53:54] 2025-05-29 05:53:41,984 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 22:53:54] 2025-05-29 05:53:41,990 | INFO     | did not find any defunct processes belonging to 455744
[2025-05-28 22:53:54] 2025-05-29 05:53:41,997 | INFO     | did not find any defunct processes belonging to 455744
[2025-05-28 22:53:54] 2025-05-29 05:53:41,997 | INFO     | ready for new job
[2025-05-28 22:53:54] 2025-05-29 05:53:41,997 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 22:53:54] 2025-05-29 05:53:41,999 | INFO     | **************************************
[2025-05-28 22:53:54] 2025-05-29 05:53:41,999 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 22:53:54] 2025-05-29 05:53:41,999 | INFO     | **************************************
[2025-05-28 22:53:54] 2025-05-29 05:53:41,999 | INFO     | 
[2025-05-28 22:53:54] 2025-05-29 05:53:42,001 | INFO     | architecture information:
[2025-05-28 22:53:54] 2025-05-29 05:53:42,002 | INFO     | executing command: cat /etc/os-release
[2025-05-28 22:53:54] 2025-05-29 05:53:42,013 | INFO     | cat /etc/os-release:
[2025-05-28 22:53:54] NAME="CentOS Linux"
[2025-05-28 22:53:54] VERSION="7 (Core)"
[2025-05-28 22:53:54] ID="centos"
[2025-05-28 22:53:54] ID_LIKE="rhel fedora"
[2025-05-28 22:53:54] VERSION_ID="7"
[2025-05-28 22:53:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 22:53:54] ANSI_COLOR="0;31"
[2025-05-28 22:53:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 22:53:54] HOME_URL="https://www.centos.org/"
[2025-05-28 22:53:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 22:53:54] 
[2025-05-28 22:53:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 22:53:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 22:53:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 22:53:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 22:53:54] 
[2025-05-28 22:53:54] 2025-05-29 05:53:42,013 | INFO     | **************************************
[2025-05-28 22:53:54] 2025-05-29 05:53:42,515 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-28 22:53:54] 2025-05-29 05:53:42,528 | INFO     | sufficient remaining disk space (1803165892608 B)
[2025-05-28 22:53:54] 2025-05-29 05:53:42,529 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 22:53:54] 2025-05-29 05:53:42,529 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 22:53:54] 2025-05-29 05:53:42,529 | INFO     | update_server=False
[2025-05-28 22:53:54] 2025-05-29 05:53:42,529 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 22:53:54] 2025-05-29 05:53:42,529 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 22:53:54] 2025-05-29 05:53:42,628 | INFO     | all data control threads have been joined
[2025-05-28 22:53:54] 2025-05-29 05:53:42,875 | INFO     | all job control threads have been joined
[2025-05-28 22:53:54] 2025-05-29 05:53:42,951 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 22:53:54] 2025-05-29 05:53:42,951 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 22:53:54] 2025-05-29 05:53:42,951 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 22:53:54] 2025-05-29 05:53:43,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 22:53:54] 2025-05-29 05:53:43,295 | INFO     | aborting loop
[2025-05-28 22:53:54] 2025-05-29 05:53:43,534 | INFO     | [job] retrieve thread has finished
[2025-05-28 22:53:54] 2025-05-29 05:53:43,546 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 22:53:54] 2025-05-29 05:53:43,550 | INFO     | all payload control threads have been joined
[2025-05-28 22:53:54] 2025-05-29 05:53:43,559 | INFO     | [payload] failed_post thread has finished
[2025-05-28 22:53:54] 2025-05-29 05:53:43,566 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 22:53:54] 2025-05-29 05:53:43,633 | INFO     | [data] control thread has finished
[2025-05-28 22:53:54] 2025-05-29 05:53:43,658 | INFO     | [payload] validate_post thread has finished
[2025-05-28 22:53:54] 2025-05-29 05:53:43,710 | INFO     | [data] copytool_in thread has finished
[2025-05-28 22:53:54] 2025-05-29 05:53:43,877 | INFO     | [job] control thread has finished
[2025-05-28 22:53:54] 2025-05-29 05:53:44,011 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 22:53:54] 2025-05-29 05:53:44,151 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 22:53:54] 2025-05-29 05:53:44,300 | INFO     | [job] job monitor thread has finished
[2025-05-28 22:53:54] 2025-05-29 05:53:44,535 | INFO     | [data] copytool_out thread has finished
[2025-05-28 22:53:54] 2025-05-29 05:53:44,556 | INFO     | [payload] control thread has finished
[2025-05-28 22:53:54] 2025-05-29 05:53:44,752 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 22:53:54] 2025-05-29 05:53:44,814 | INFO     | [job] validate thread has finished
[2025-05-28 22:53:54] 2025-05-29 05:53:45,466 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 22:53:54] 2025-05-29 05:53:46,467 | INFO     | [job] queue monitor thread has finished
[2025-05-28 22:53:54] 2025-05-29 05:53:48,017 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 22:53:54] 2025-05-29 05:53:49,303 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139962408896320)>', '<ExcThread(monitor, started 139961869248256)>']
[2025-05-28 22:53:54] 2025-05-29 05:53:49,986 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 22:53:54] 2025-05-29 05:53:49,986 | INFO     | [monitor] control thread has ended
[2025-05-28 22:53:54] 2025-05-29 05:53:54,322 | INFO     | all workflow threads have been joined
[2025-05-28 22:53:54] 2025-05-29 05:53:54,322 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 22:53:54] 2025-05-29 05:53:54,323 | INFO     | traces error code: 0
[2025-05-28 22:53:54] 2025-05-29 05:53:54,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 22:53:54] 2025-05-29 05:53:54,456 [wrapper] ==== pilot stdout END ====
[2025-05-28 22:53:54] 2025-05-29 05:53:54,459 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 22:53:54] 2025-05-29 05:53:54,461 [wrapper] pilotpid: 449441
[2025-05-28 22:53:54] 2025-05-29 05:53:54,463 [wrapper] Pilot exit status: 0
[2025-05-28 22:53:54] 2025-05-29 05:53:54,471 [wrapper] pandaids: 6669134759
[2025-05-28 22:53:54] 2025-05-29 05:53:54,507 [wrapper] cleanup supervisor_pilot  449447 449442
[2025-05-28 22:53:54] 2025-05-29 05:53:54,510 [wrapper] Test setup, not cleaning
[2025-05-28 22:53:54] 2025-05-29 05:53:54,512 [wrapper] apfmon messages muted
[2025-05-28 22:53:54] 2025-05-29 05:53:54,514 [wrapper] ==== wrapper stdout END ====
[2025-05-28 22:53:54] 2025-05-29 05:53:54,516 [wrapper] ==== wrapper stderr END ====
[2025-05-28 22:53:54]  *** Error codes and diagnostics ***
[2025-05-28 22:53:54]     "exeErrorCode": 65,
[2025-05-28 22:53:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 22:53:54]     "pilotErrorCode": 1305,
[2025-05-28 22:53:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 22:53:54]  *** Listing of results directory ***
[2025-05-28 22:53:54] total 223164
[2025-05-28 22:53:54] -rw-r--r--. 1 boinc boinc    495897 May 28 19:31 pilot3.tar.gz
[2025-05-28 22:53:54] -rwx------. 1 boinc boinc     37140 May 28 19:33 runpilot2-wrapper.sh
[2025-05-28 22:53:54] -rw-r--r--. 1 boinc boinc      5111 May 28 19:33 queuedata.json
[2025-05-28 22:53:54] -rw-r--r--. 1 boinc boinc       100 May 28 22:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 22:53:54] -rwxr-xr-x. 1 boinc boinc      7986 May 28 22:50 run_atlas
[2025-05-28 22:53:54] -rw-r--r--. 1 boinc boinc       105 May 28 22:50 job.xml
[2025-05-28 22:53:54] -rw-r--r--. 2 boinc boinc 224490075 May 28 22:50 EVNT.44871834._003648.pool.root.1
[2025-05-28 22:53:54] -rw-r--r--. 1 boinc boinc      6602 May 28 22:50 init_data.xml
[2025-05-28 22:53:54] -rw-r--r--. 2 boinc boinc     15093 May 28 22:50 start_atlas.sh
[2025-05-28 22:53:54] drwxrwx--x. 2 boinc boinc      4096 May 28 22:50 shared
[2025-05-28 22:53:54] -rw-r--r--. 2 boinc boinc    508882 May 28 22:50 input.tar.gz
[2025-05-28 22:53:54] -rw-r--r--. 1 boinc boinc         0 May 28 22:50 boinc_lockfile
[2025-05-28 22:53:54] -rw-r--r--. 1 boinc boinc      2556 May 28 22:50 pandaJob.out
[2025-05-28 22:53:54] -rw-------. 1 boinc boinc    993415 May 28 22:51 agis_schedconf.cvmfs.json
[2025-05-28 22:53:54] -rw-------. 1 boinc boinc   1603667 May 28 22:51 agis_ddmendpoints.agis.ALL.json
[2025-05-28 22:53:54] drwx------. 4 boinc boinc      4096 May 28 22:51 pilot3
[2025-05-28 22:53:54] -rw-------. 1 boinc boinc       956 May 28 22:51 memory_monitor_summary.json
[2025-05-28 22:53:54] -rw-r--r--. 1 boinc boinc       522 May 28 22:51 boinc_task_state.xml
[2025-05-28 22:53:54] -rw-------. 1 boinc boinc     20232 May 28 22:51 log.44871837._093835.job.log.tgz.1
[2025-05-28 22:53:54] -rw-------. 1 boinc boinc        95 May 28 22:53 pilot_heartbeat.json
[2025-05-28 22:53:54] -rw-------. 1 boinc boinc      8312 May 28 22:53 heartbeat.json
[2025-05-28 22:53:54] -rw-r--r--. 1 boinc boinc      8192 May 28 22:53 boinc_mmap_file
[2025-05-28 22:53:54] -rw-r--r--. 1 boinc boinc        22 May 28 22:53 wrapper_checkpoint.txt
[2025-05-28 22:53:54] -rw-------. 1 boinc boinc      4352 May 28 22:53 pilotlog.txt
[2025-05-28 22:53:54] -rw-------. 1 boinc boinc     72668 May 28 22:53 log.44871837._093835.job.log.1
[2025-05-28 22:53:54] -rw-------. 1 boinc boinc       188 May 28 22:53 output.list
[2025-05-28 22:53:54] -rw-r--r--. 1 boinc boinc       620 May 28 22:53 runtime_log
[2025-05-28 22:53:54] -rw-------. 1 boinc boinc    112640 May 28 22:53 result.tar.gz
[2025-05-28 22:53:54] -rw-r--r--. 1 boinc boinc      8484 May 28 22:53 runtime_log.err
[2025-05-28 22:53:54] -rw-------. 1 boinc boinc       644 May 28 22:53 nxONDmhGie7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLUUKDmCvufNn.diag
[2025-05-28 22:53:54] -rw-r--r--. 1 boinc boinc     21414 May 28 22:53 stderr.txt
[2025-05-28 22:53:54] No HITS result produced
[2025-05-28 22:53:54]  *** Contents of shared directory: ***
[2025-05-28 22:53:54] total 219864
[2025-05-28 22:53:54] -rw-r--r--. 2 boinc boinc 224490075 May 28 22:50 ATLAS.root_0
[2025-05-28 22:53:54] -rw-r--r--. 2 boinc boinc     15093 May 28 22:50 start_atlas.sh
[2025-05-28 22:53:54] -rw-r--r--. 2 boinc boinc    508882 May 28 22:50 input.tar.gz
[2025-05-28 22:53:54] -rw-------. 1 boinc boinc    112640 May 28 22:53 result.tar.gz
22:53:55 (445884): run_atlas exited; CPU time 19.351217
22:53:55 (445884): called boinc_finish(0)

</stderr_txt>
]]>

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