Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:53:34 (2209327): wrapper (7.7.26015): starting
22:53:34 (2209327): wrapper: running run_atlas (--nthreads 12)
[2025-05-28 22:53:34] Arguments: --nthreads 12
[2025-05-28 22:53:34] Threads: 12
[2025-05-28 22:53:34] Checking for CVMFS
[2025-05-28 22:53:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 22:53:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 22:53:34] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 22:53:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 22:53:34] 2.11.5.0 3522937 14844 223500 146544 1 249 40444788 45568000 10916 130560 0 160967843 99.787 114075745 27585 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-28 22:53:34] CVMFS is ok
[2025-05-28 22:53:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 22:53:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 22:53:34] Further information can be found at the LHC@home message board.
[2025-05-28 22:53:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 22:53:34] Checking for apptainer binary...
[2025-05-28 22:53:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 22:53:34] Running /usr/bin/apptainer --version
[2025-05-28 22:53:34] apptainer version 1.4.0-1.el9
[2025-05-28 22:53:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 22:53:34] wns0033.triumf.lcg
[2025-05-28 22:53:34] apptainer works
[2025-05-28 22:53:34] Set ATHENA_PROC_NUMBER=12
[2025-05-28 22:53:34] Set ATHENA_CORE_NUMBER=12
[2025-05-28 22:53:34] Starting ATLAS job with PandaID=6669134699
[2025-05-28 22:53:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 22:56:40]  *** The last 200 lines of the pilot log: ***
[2025-05-28 22:56:40] 2025-05-29 05:56:26,069 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 22:56:40] 2025-05-29 05:56:26,069 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 22:56:40] 2025-05-29 05:56:26,069 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 22:56:40] 2025-05-29 05:56:26,069 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 22:56:40] 2025-05-29 05:56:26,069 | WARNING  | found no stored workdir sizes
[2025-05-28 22:56:40] 2025-05-29 05:56:26,070 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 22:56:40] 2025-05-29 05:56:26,070 | WARNING  | wrong length of table data, x=[1748498044.0], y=[865.0] (must be same and length>=4)
[2025-05-28 22:56:40] 2025-05-29 05:56:26,070 | INFO     | ..............................
[2025-05-28 22:56:40] 2025-05-29 05:56:26,070 | INFO     | . Timing measurements:
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . get job = 0 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . initial setup = 2 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . payload setup = 4 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . stage-in = 0 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . payload execution = 14 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . stage-out = 0 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . log creation = 0 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | ..............................
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669134699/pilotlog.txt
[2025-05-28 22:56:40] 2025-05-29 05:56:26,083 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-28 22:56:40] - Log from pilotlog.txt -
[2025-05-28 22:56:40] 2025-05-29 05:56:26,069 | INFO     | extracted standard info from prmon json
[2025-05-28 22:56:40] 2025-05-29 05:56:26,069 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 22:56:40] 2025-05-29 05:56:26,069 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 22:56:40] 2025-05-29 05:56:26,069 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 22:56:40] 2025-05-29 05:56:26,069 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 22:56:40] 2025-05-29 05:56:26,069 | WARNING  | found no stored workdir sizes
[2025-05-28 22:56:40] 2025-05-29 05:56:26,070 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 22:56:40] 2025-05-29 05:56:26,070 | WARNING  | wrong length of table data, x=[1748498044.0], y=[865.0] (must be same and length>=4)
[2025-05-28 22:56:40] 2025-05-29 05:56:26,070 | INFO     | ..............................
[2025-05-28 22:56:40] 2025-05-29 05:56:26,070 | INFO     | . Timing measurements:
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . get job = 0 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . initial setup = 2 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . payload setup = 4 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . stage-in = 0 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . payload execution = 14 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . stage-out = 0 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . log creation = 0 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | ..............................
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669134699/pilotlog.txt
[2025-05-28 22:56:40] 2025-05-29 05:56:26,083 | WARNING  | 
[2025-05-28 22:56:40] [begin log extracts]
[2025-05-28 22:56:40] - Log from pilotlog.txt -
[2025-05-28 22:56:40] 2025-05-29 05:56:26,069 | INFO     | extracted standard info from prmon json
[2025-05-28 22:56:40] 2025-05-29 05:56:26,069 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 22:56:40] 2025-05-29 05:56:26,069 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 22:56:40] 2025-05-29 05:56:26,069 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 22:56:40] 2025-05-29 05:56:26,069 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 22:56:40] 2025-05-29 05:56:26,069 | WARNING  | found no stored workdir sizes
[2025-05-28 22:56:40] 2025-05-29 05:56:26,070 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 22:56:40] 2025-05-29 05:56:26,070 | WARNING  | wrong length of table data, x=[1748498044.0], y=[865.0] (must be same and length>=4)
[2025-05-28 22:56:40] 2025-05-29 05:56:26,070 | INFO     | ..............................
[2025-05-28 22:56:40] 2025-05-29 05:56:26,070 | INFO     | . Timing measurements:
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . get job = 0 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . initial setup = 2 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . payload setup = 4 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . stage-in = 0 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . payload execution = 14 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . stage-out = 0 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | . log creation = 0 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | ..............................
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 22:56:40] 2025-05-29 05:56:26,071 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669134699/pilotlog.txt
[2025-05-28 22:56:40] [end log extracts]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,084 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-28 22:56:40] 2025-05-29 05:56:26,085 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-28 22:56:40] 2025-05-29 05:56:26,145 | INFO     | 
[2025-05-28 22:56:40] 2025-05-29 05:56:26,145 | INFO     | job summary report
[2025-05-28 22:56:40] 2025-05-29 05:56:26,145 | INFO     | --------------------------------------------------
[2025-05-28 22:56:40] 2025-05-29 05:56:26,145 | INFO     | PanDA job id: 6669134699
[2025-05-28 22:56:40] 2025-05-29 05:56:26,145 | INFO     | task id: 44871837
[2025-05-28 22:56:40] 2025-05-29 05:56:26,145 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-28 22:54:11,592 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-28 22:56:40] 2025-05-29 05:56:26,145 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 22:56:40] 2025-05-29 05:56:26,145 | INFO     | pilot state: failed 
[2025-05-28 22:56:40] 2025-05-29 05:56:26,145 | INFO     | transexitcode: 65
[2025-05-28 22:56:40] 2025-05-29 05:56:26,145 | INFO     | exeerrorcode: 65
[2025-05-28 22:56:40] 2025-05-29 05:56:26,145 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 22:56:40] 2025-05-29 05:56:26,145 | INFO     | exitcode: 65
[2025-05-28 22:56:40] 2025-05-29 05:56:26,145 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 22:56:40] 2025-05-29 05:56:26,145 | INFO     | cpuconsumptiontime: 15 s
[2025-05-28 22:56:40] 2025-05-29 05:56:26,145 | INFO     | nevents: 0
[2025-05-28 22:56:40] 2025-05-29 05:56:26,146 | INFO     | neventsw: 0
[2025-05-28 22:56:40] 2025-05-29 05:56:26,146 | INFO     | pid: 2230667
[2025-05-28 22:56:40] 2025-05-29 05:56:26,146 | INFO     | pgrp: 2230667
[2025-05-28 22:56:40] 2025-05-29 05:56:26,146 | INFO     | corecount: 12
[2025-05-28 22:56:40] 2025-05-29 05:56:26,146 | INFO     | event service: False
[2025-05-28 22:56:40] 2025-05-29 05:56:26,146 | INFO     | sizes: {0: 2405231, 3: 2405437, 11: 2405465, 21: 2428650, 22: 2432885, 24: 2432913, 149: 2433183}
[2025-05-28 22:56:40] 2025-05-29 05:56:26,146 | INFO     | --------------------------------------------------
[2025-05-28 22:56:40] 2025-05-29 05:56:26,146 | INFO     | 
[2025-05-28 22:56:40] 2025-05-29 05:56:26,146 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-28 22:56:40] 2025-05-29 05:56:26,161 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,161 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,161 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,161 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,161 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,161 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,161 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,161 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,161 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,161 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,161 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,161 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,161 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,162 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,162 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,162 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,162 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,162 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 22:56:40] 2025-05-29 05:56:26,162 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,162 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 22:56:40] 2025-05-29 05:56:26,162 | INFO     | job 6669134699 has completed (purged errors)
[2025-05-28 22:56:40] 2025-05-29 05:56:26,162 | INFO     | overall cleanup function is called
[2025-05-28 22:56:40] 2025-05-29 05:56:27,169 | INFO     | --- collectZombieJob: --- 10, [2230667]
[2025-05-28 22:56:40] 2025-05-29 05:56:27,169 | INFO     | zombie collector waiting for pid 2230667
[2025-05-28 22:56:40] 2025-05-29 05:56:27,169 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 22:56:40] 2025-05-29 05:56:27,170 | INFO     | collected zombie processes
[2025-05-28 22:56:40] 2025-05-29 05:56:27,170 | INFO     | will attempt to kill all subprocesses of pid=2230667
[2025-05-28 22:56:40] 2025-05-29 05:56:27,392 | INFO     | process IDs to be killed: [2230667] (in reverse order)
[2025-05-28 22:56:40] 2025-05-29 05:56:27,545 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 22:56:40] 2025-05-29 05:56:27,545 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 22:56:40] 2025-05-29 05:56:27,551 | INFO     | did not find any defunct processes belonging to 2230667
[2025-05-28 22:56:40] 2025-05-29 05:56:27,557 | INFO     | did not find any defunct processes belonging to 2230667
[2025-05-28 22:56:40] 2025-05-29 05:56:27,557 | INFO     | ready for new job
[2025-05-28 22:56:40] 2025-05-29 05:56:27,557 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 22:56:40] 2025-05-29 05:56:27,559 | INFO     | **************************************
[2025-05-28 22:56:40] 2025-05-29 05:56:27,559 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 22:56:40] 2025-05-29 05:56:27,559 | INFO     | **************************************
[2025-05-28 22:56:40] 2025-05-29 05:56:27,559 | INFO     | 
[2025-05-28 22:56:40] 2025-05-29 05:56:27,561 | INFO     | architecture information:
[2025-05-28 22:56:40] 2025-05-29 05:56:27,561 | INFO     | executing command: cat /etc/os-release
[2025-05-28 22:56:40] 2025-05-29 05:56:27,577 | INFO     | cat /etc/os-release:
[2025-05-28 22:56:40] NAME="CentOS Linux"
[2025-05-28 22:56:40] VERSION="7 (Core)"
[2025-05-28 22:56:40] ID="centos"
[2025-05-28 22:56:40] ID_LIKE="rhel fedora"
[2025-05-28 22:56:40] VERSION_ID="7"
[2025-05-28 22:56:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 22:56:40] ANSI_COLOR="0;31"
[2025-05-28 22:56:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 22:56:40] HOME_URL="https://www.centos.org/"
[2025-05-28 22:56:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 22:56:40] 
[2025-05-28 22:56:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 22:56:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 22:56:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 22:56:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 22:56:40] 
[2025-05-28 22:56:40] 2025-05-29 05:56:27,578 | INFO     | **************************************
[2025-05-28 22:56:40] 2025-05-29 05:56:28,081 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-28 22:56:40] 2025-05-29 05:56:28,170 | INFO     | sufficient remaining disk space (1895841136640 B)
[2025-05-28 22:56:40] 2025-05-29 05:56:28,170 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 22:56:40] 2025-05-29 05:56:28,170 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 22:56:40] 2025-05-29 05:56:28,170 | INFO     | update_server=False
[2025-05-28 22:56:40] 2025-05-29 05:56:28,170 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 22:56:40] 2025-05-29 05:56:28,171 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 22:56:40] 2025-05-29 05:56:28,171 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 22:56:40] 2025-05-29 05:56:28,172 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 22:56:40] 2025-05-29 05:56:28,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 22:56:40] 2025-05-29 05:56:28,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 22:56:40] 2025-05-29 05:56:28,489 | INFO     | all data control threads have been joined
[2025-05-28 22:56:40] 2025-05-29 05:56:28,499 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 22:56:40] 2025-05-29 05:56:28,499 | INFO     | aborting loop
[2025-05-28 22:56:40] 2025-05-29 05:56:28,539 | INFO     | all payload control threads have been joined
[2025-05-28 22:56:40] 2025-05-29 05:56:28,540 | INFO     | all job control threads have been joined
[2025-05-28 22:56:40] 2025-05-29 05:56:28,752 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 22:56:40] 2025-05-29 05:56:29,176 | INFO     | [job] retrieve thread has finished
[2025-05-28 22:56:40] 2025-05-29 05:56:29,335 | INFO     | [payload] failed_post thread has finished
[2025-05-28 22:56:40] 2025-05-29 05:56:29,495 | INFO     | [data] control thread has finished
[2025-05-28 22:56:40] 2025-05-29 05:56:29,505 | INFO     | [job] job monitor thread has finished
[2025-05-28 22:56:40] 2025-05-29 05:56:29,545 | INFO     | [payload] control thread has finished
[2025-05-28 22:56:40] 2025-05-29 05:56:29,545 | INFO     | [job] control thread has finished
[2025-05-28 22:56:40] 2025-05-29 05:56:29,559 | INFO     | [job] validate thread has finished
[2025-05-28 22:56:40] 2025-05-29 05:56:29,650 | INFO     | [data] copytool_in thread has finished
[2025-05-28 22:56:40] 2025-05-29 05:56:29,701 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 22:56:40] 2025-05-29 05:56:29,804 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 22:56:40] 2025-05-29 05:56:30,087 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 22:56:40] 2025-05-29 05:56:30,177 | INFO     | [data] copytool_out thread has finished
[2025-05-28 22:56:40] 2025-05-29 05:56:30,371 | INFO     | [payload] validate_post thread has finished
[2025-05-28 22:56:40] 2025-05-29 05:56:30,411 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 22:56:40] 2025-05-29 05:56:31,157 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 22:56:40] 2025-05-29 05:56:32,163 | INFO     | [job] queue monitor thread has finished
[2025-05-28 22:56:40] 2025-05-29 05:56:32,760 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 22:56:40] 2025-05-29 05:56:34,616 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139654610405184)>', '<ExcThread(monitor, started 139653948634880)>']
[2025-05-28 22:56:40] 2025-05-29 05:56:35,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 22:56:40] 2025-05-29 05:56:35,211 | INFO     | [monitor] control thread has ended
[2025-05-28 22:56:40] 2025-05-29 05:56:39,642 | INFO     | all workflow threads have been joined
[2025-05-28 22:56:40] 2025-05-29 05:56:39,642 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 22:56:40] 2025-05-29 05:56:39,643 | INFO     | traces error code: 0
[2025-05-28 22:56:40] 2025-05-29 05:56:39,643 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 22:56:40] 2025-05-29 05:56:39,783 [wrapper] ==== pilot stdout END ====
[2025-05-28 22:56:40] 2025-05-29 05:56:39,787 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 22:56:40] 2025-05-29 05:56:39,788 [wrapper] pilotpid: 2212893
[2025-05-28 22:56:40] 2025-05-29 05:56:39,790 [wrapper] Pilot exit status: 0
[2025-05-28 22:56:40] 2025-05-29 05:56:39,827 [wrapper] pandaids: 6669134699
[2025-05-28 22:56:40] 2025-05-29 05:56:39,863 [wrapper] cleanup supervisor_pilot 2212899 2212894
[2025-05-28 22:56:40] 2025-05-29 05:56:39,865 [wrapper] Test setup, not cleaning
[2025-05-28 22:56:40] 2025-05-29 05:56:39,877 [wrapper] apfmon messages muted
[2025-05-28 22:56:40] 2025-05-29 05:56:39,879 [wrapper] ==== wrapper stdout END ====
[2025-05-28 22:56:40] 2025-05-29 05:56:39,892 [wrapper] ==== wrapper stderr END ====
[2025-05-28 22:56:40]  *** Error codes and diagnostics ***
[2025-05-28 22:56:40]     "exeErrorCode": 65,
[2025-05-28 22:56:40]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 22:56:40]     "pilotErrorCode": 1305,
[2025-05-28 22:56:40]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 22:56:40]  *** Listing of results directory ***
[2025-05-28 22:56:40] total 220416
[2025-05-28 22:56:40] -rw-r--r--. 1 boinc boinc    495897 May 28 19:31 pilot3.tar.gz
[2025-05-28 22:56:40] -rwx------. 1 boinc boinc     37140 May 28 19:31 runpilot2-wrapper.sh
[2025-05-28 22:56:40] -rw-r--r--. 1 boinc boinc      5111 May 28 19:31 queuedata.json
[2025-05-28 22:56:40] -rw-r--r--. 1 boinc boinc       100 May 28 22:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 22:56:40] -rwxr-xr-x. 1 boinc boinc      7986 May 28 22:53 run_atlas
[2025-05-28 22:56:40] -rw-r--r--. 1 boinc boinc       105 May 28 22:53 job.xml
[2025-05-28 22:56:40] -rw-r--r--. 2 boinc boinc 221673556 May 28 22:53 EVNT.44871834._003645.pool.root.1
[2025-05-28 22:56:40] -rw-r--r--. 2 boinc boinc     15093 May 28 22:53 start_atlas.sh
[2025-05-28 22:56:40] drwxrwx--x. 2 boinc boinc      4096 May 28 22:53 shared
[2025-05-28 22:56:40] -rw-r--r--. 2 boinc boinc    508877 May 28 22:53 input.tar.gz
[2025-05-28 22:56:40] -rw-r--r--. 1 boinc boinc      6601 May 28 22:53 init_data.xml
[2025-05-28 22:56:40] -rw-r--r--. 1 boinc boinc         0 May 28 22:53 boinc_lockfile
[2025-05-28 22:56:40] -rw-r--r--. 1 boinc boinc      2559 May 28 22:53 pandaJob.out
[2025-05-28 22:56:40] -rw-------. 1 boinc boinc    993415 May 28 22:53 agis_schedconf.cvmfs.json
[2025-05-28 22:56:40] -rw-------. 1 boinc boinc   1603667 May 28 22:53 agis_ddmendpoints.agis.ALL.json
[2025-05-28 22:56:40] drwx------. 4 boinc boinc      4096 May 28 22:53 pilot3
[2025-05-28 22:56:40] -rw-r--r--. 1 boinc boinc       522 May 28 22:54 boinc_task_state.xml
[2025-05-28 22:56:40] -rw-------. 1 boinc boinc       962 May 28 22:54 memory_monitor_summary.json
[2025-05-28 22:56:40] -rw-------. 1 boinc boinc     20621 May 28 22:54 log.44871837._093775.job.log.tgz.1
[2025-05-28 22:56:40] -rw-------. 1 boinc boinc        95 May 28 22:55 pilot_heartbeat.json
[2025-05-28 22:56:40] -rw-------. 1 boinc boinc      8324 May 28 22:56 heartbeat.json
[2025-05-28 22:56:40] -rw-r--r--. 1 boinc boinc      8192 May 28 22:56 boinc_mmap_file
[2025-05-28 22:56:40] -rw-r--r--. 1 boinc boinc        22 May 28 22:56 wrapper_checkpoint.txt
[2025-05-28 22:56:40] -rw-------. 1 boinc boinc      4475 May 28 22:56 pilotlog.txt
[2025-05-28 22:56:40] -rw-------. 1 boinc boinc     73266 May 28 22:56 log.44871837._093775.job.log.1
[2025-05-28 22:56:40] -rw-------. 1 boinc boinc       188 May 28 22:56 output.list
[2025-05-28 22:56:40] -rw-r--r--. 1 boinc boinc       620 May 28 22:56 runtime_log
[2025-05-28 22:56:40] -rw-------. 1 boinc boinc    112640 May 28 22:56 result.tar.gz
[2025-05-28 22:56:40] -rw-r--r--. 1 boinc boinc      8484 May 28 22:56 runtime_log.err
[2025-05-28 22:56:40] -rw-------. 1 boinc boinc       644 May 28 22:56 e5WNDmkEie7n9Rq4apOajLDm4fhM0noT9bVof3QYDm5TUKDmdM5aBo.diag
[2025-05-28 22:56:40] -rw-r--r--. 1 boinc boinc     21482 May 28 22:56 stderr.txt
[2025-05-28 22:56:40] No HITS result produced
[2025-05-28 22:56:40]  *** Contents of shared directory: ***
[2025-05-28 22:56:40] total 217112
[2025-05-28 22:56:40] -rw-r--r--. 2 boinc boinc 221673556 May 28 22:53 ATLAS.root_0
[2025-05-28 22:56:40] -rw-r--r--. 2 boinc boinc     15093 May 28 22:53 start_atlas.sh
[2025-05-28 22:56:40] -rw-r--r--. 2 boinc boinc    508877 May 28 22:53 input.tar.gz
[2025-05-28 22:56:40] -rw-------. 1 boinc boinc    112640 May 28 22:56 result.tar.gz
22:56:41 (2209327): run_atlas exited; CPU time 18.521977
22:56:41 (2209327): called boinc_finish(0)

</stderr_txt>
]]>

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