Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-05-29 13:59:22 (4196): Detected: vboxwrapper 26206
2025-05-29 13:59:22 (4196): Detected: BOINC client v8.0.2
2025-05-29 13:59:22 (4196): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-05-29 13:59:22 (4196): Successfully copied 'init_data.xml' to the shared directory.
2025-05-29 13:59:23 (4196): Create VM. (boinc_fa2b5227ecf5924d, slot#0)
2025-05-29 13:59:23 (4196): Setting Memory Size for VM. (4800MB)
2025-05-29 13:59:24 (4196): Setting CPU Count for VM. (8)
2025-05-29 13:59:24 (4196): Setting Chipset Options for VM.
2025-05-29 13:59:24 (4196): Setting Graphics Controller Options for VM.
2025-05-29 13:59:24 (4196): Setting Boot Options for VM.
2025-05-29 13:59:25 (4196): Setting Network Configuration for NAT.
2025-05-29 13:59:25 (4196): Enabling VM Network Access.
2025-05-29 13:59:25 (4196): Disabling USB Support for VM.
2025-05-29 13:59:25 (4196): Disabling COM Port Support for VM.
2025-05-29 13:59:26 (4196): Disabling LPT Port Support for VM.
2025-05-29 13:59:26 (4196): Disabling Audio Support for VM.
2025-05-29 13:59:26 (4196): Disabling Clipboard Support for VM.
2025-05-29 13:59:26 (4196): Disabling Drag and Drop Support for VM.
2025-05-29 13:59:27 (4196): Adding storage controller(s) to VM.
2025-05-29 13:59:27 (4196): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-05-29 13:59:30 (4196): Adding VirtualBox Guest Additions to VM.
2025-05-29 13:59:30 (4196): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-05-29 13:59:30 (4196): forwarding host port 63722 to guest port 80
2025-05-29 13:59:30 (4196): Enabling remote desktop for VM.
2025-05-29 13:59:31 (4196): Enabling shared directory for VM.
2025-05-29 13:59:32 (4196): Starting VM using VBoxManage interface. (boinc_fa2b5227ecf5924d, slot#0)
2025-05-29 13:59:37 (4196): Successfully started VM. (PID = '10264')
2025-05-29 13:59:37 (4196): Reporting VM Process ID to BOINC.
2025-05-29 13:59:37 (4196): Guest Log: BIOS: VirtualBox 7.1.6
2025-05-29 13:59:37 (4196): Guest Log: CPUID EDX: 0x178bfbff
2025-05-29 13:59:37 (4196): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-05-29 13:59:37 (4196): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-05-29 13:59:37 (4196): VM state change detected. (old = 'poweredoff', new = 'running')
2025-05-29 13:59:37 (4196): Detected: Web Application Enabled (http://localhost:63722)
2025-05-29 13:59:37 (4196): Detected: Remote Desktop Enabled (localhost:63723)
2025-05-29 13:59:37 (4196): Preference change detected
2025-05-29 13:59:37 (4196): Setting CPU throttle for VM. (100%)
2025-05-29 13:59:37 (4196): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-05-29 13:59:39 (4196): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-05-29 13:59:39 (4196): Guest Log: BIOS: Booting from Hard Disk...
2025-05-29 13:59:42 (4196): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-05-29 13:59:42 (4196): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-05-29 13:59:42 (4196): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-05-29 13:59:48 (4196): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-05-29 13:59:48 (4196): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-05-29 13:59:53 (4196): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-05-29 13:59:53 (4196): Guest Log: 00:00:00.000148 main     Log opened 2025-05-29T13:59:52.418686000Z
2025-05-29 13:59:53 (4196): Guest Log: 00:00:00.000231 main     OS Product: Linux
2025-05-29 13:59:53 (4196): Guest Log: 00:00:00.000259 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-05-29 13:59:53 (4196): Guest Log: 00:00:00.000282 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-05-29 13:59:53 (4196): Guest Log: 00:00:00.000306 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-05-29 13:59:53 (4196): Guest Log: 00:00:00.000307 main     Process ID: 1371
2025-05-29 13:59:53 (4196): Guest Log: 00:00:00.000307 main     Package type: LINUX_64BITS_GENERIC
2025-05-29 13:59:53 (4196): Guest Log: 00:00:00.001385 main     5.2.32 r132073 started. Verbose level = 0
2025-05-29 13:59:54 (4196): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-05-29 13:59:54 (4196): Guest Log: [INFO] Mounting shared directory
2025-05-29 13:59:54 (4196): Guest Log: [INFO] Checking for init_data.xml
2025-05-29 14:00:03 (4196): Guest Log: 00:00:10.009396 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 968 379 000ns (GuestNow=1 748 520 003 453 261 000 ns GuestLast=1 748 527 192 421 640 000 ns fSetTimeLastLoop=true )
2025-05-29 14:01:03 (4196): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-05-29 14:01:03 (4196): Guest Log: [INFO] Detected branch: prod
2025-05-29 14:01:03 (4196): Guest Log: This is the prod version of the ATLAS job wrapper
2025-05-29 14:01:03 (4196): Guest Log: Copying input files
2025-05-29 14:01:04 (4196): Guest Log: Copied input files into RunAtlas.
2025-05-29 14:01:04 (4196): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-05-29 14:01:04 (4196): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-05-29 14:01:04 (4196): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-05-29 14:01:04 (4196): Guest Log: Further information can be found at the LHC@home message board.
2025-05-29 14:03:33 (4196): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-05-29 14:03:34 (4196): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-05-29 14:03:34 (4196): Guest Log: 2.6.3.0 1699 3 32288 146561 4 1 3117617 4096000 0 65024 0 0 n/a 1 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-05-29 14:03:34 (4196): Guest Log: copied the webapp to /var/www
2025-05-29 14:03:34 (4196): Guest Log: ATHENA_PROC_NUMBER=8
2025-05-29 14:03:34 (4196): Guest Log: ATHENA_CORE_NUMBER=8
2025-05-29 14:03:34 (4196): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-05-29 14:03:34 (4196): Guest Log:  *** Starting ATLAS job. (PandaID=6669134264 taskID=44871837) ***
2025-05-29 14:16:34 (4196): Guest Log:  *** Job finished ***
2025-05-29 14:16:34 (4196): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:15:50,796 | INFO     | [payload] validate_pre thread has finished
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:15:51,573 | INFO     | [data] copytool_out thread has finished
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:15:53,868 | INFO     | [data] queue_monitor thread has finished
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:15:54,729 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140531502491456)>', '<ExcThread(monitor, started 140530918876928)>']
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:15:55,397 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:15:55,398 | INFO     | [monitor] control thread has ended
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:15:59,783 | INFO     | all workflow threads have been joined
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:15:59,783 | INFO     | end of generic workflow (traces error code: 0)
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:15:59,783 | INFO     | traces error code: 0
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:15:59,783 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:15:59,860 [wrapper] ==== pilot stdout END ====
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:15:59,866 [wrapper] ==== wrapper stdout RESUME ====
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:15:59,870 [wrapper] pilotpid: 6100
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:15:59,875 [wrapper] Pilot exit status: 0
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:16:32,215 [wrapper] pandaids: 6669134264
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:16:32,254 [wrapper] cleanup supervisor_pilot  6106 6101
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:16:32,266 [wrapper] Test setup, not cleaning
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:16:32,271 [wrapper] apfmon messages muted
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:16:32,276 [wrapper] ==== wrapper stdout END ====
2025-05-29 14:16:34 (4196): Guest Log: 2025-05-29 12:16:32,281 [wrapper] ==== wrapper stderr END ====
2025-05-29 14:16:34 (4196): Guest Log:  *** Error codes and diagnostics ***
2025-05-29 14:16:34 (4196): Guest Log:     "exeErrorCode": 65,
2025-05-29 14:16:34 (4196): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-05-29 14:16:34 (4196): Guest Log:     "pilotErrorCode": 1305,
2025-05-29 14:16:34 (4196): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-05-29 14:16:34 (4196): Guest Log:  *** Listing of results directory ***
2025-05-29 14:16:34 (4196): Guest Log: total 3892
2025-05-29 14:16:34 (4196): Guest Log: -rw-r--r--. 1 atlas atlas  495897 May 29 02:05 pilot3.tar.gz
2025-05-29 14:16:34 (4196): Guest Log: -rw-r--r--. 1 atlas atlas    5111 May 29 02:23 queuedata.json
2025-05-29 14:16:34 (4196): Guest Log: -rwx------. 1 atlas atlas   37140 May 29 02:23 runpilot2-wrapper.sh
2025-05-29 14:16:34 (4196): Guest Log: -rwxr-xr-x. 1 atlas atlas    9128 May 29 12:01 init_data.xml
2025-05-29 14:16:34 (4196): Guest Log: -rwxr-xr-x. 1 atlas atlas  508879 May 29 12:01 input.tar.gz
2025-05-29 14:16:34 (4196): Guest Log: -rwxr-xr-x. 1 atlas atlas   15093 May 29 12:01 start_atlas.sh
2025-05-29 14:16:34 (4196): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 May 29 12:01 EVNT.44871834._003641.pool.root.1 -> /data/./ATLAS.root_0
2025-05-29 14:16:34 (4196): Guest Log: -rw-r--r--. 1 atlas atlas    2559 May 29 12:03 pandaJob.out
2025-05-29 14:16:34 (4196): Guest Log: -rw-------. 1 atlas atlas  993012 May 29 12:10 agis_schedconf.cvmfs.json
2025-05-29 14:16:34 (4196): Guest Log: -rw-------. 1 atlas atlas 1603667 May 29 12:10 agis_ddmendpoints.agis.ALL.json
2025-05-29 14:16:34 (4196): Guest Log: drwx------. 4 atlas atlas    4096 May 29 12:10 pilot3
2025-05-29 14:16:34 (4196): Guest Log: -rw-------. 1 atlas atlas    1009 May 29 12:13 memory_monitor_summary.json
2025-05-29 14:16:34 (4196): Guest Log: -rw-------. 1 atlas atlas   21401 May 29 12:13 log.44871837._093665.job.log.tgz.1
2025-05-29 14:16:34 (4196): Guest Log: -rw-------. 1 atlas atlas      95 May 29 12:15 pilot_heartbeat.json
2025-05-29 14:16:34 (4196): Guest Log: -rw-------. 1 atlas atlas    8366 May 29 12:15 heartbeat.json
2025-05-29 14:16:34 (4196): Guest Log: -rw-------. 1 atlas atlas    4722 May 29 12:15 pilotlog.txt
2025-05-29 14:16:34 (4196): Guest Log: -rw-------. 1 atlas atlas   84485 May 29 12:16 log.44871837._093665.job.log.1
2025-05-29 14:16:34 (4196): Guest Log: -rw-------. 1 atlas atlas     188 May 29 12:16 output.list
2025-05-29 14:16:34 (4196): Guest Log: -rw-r--r--. 1 atlas atlas     620 May 29 12:16 runtime_log
2025-05-29 14:16:34 (4196): Guest Log: -rw-------. 1 atlas atlas  122880 May 29 12:16 result.tar.gz
2025-05-29 14:16:34 (4196): Guest Log: -rw-r--r--. 1 atlas atlas    8474 May 29 12:16 runtime_log.err
2025-05-29 14:16:34 (4196): Guest Log: -rw-------. 1 atlas atlas     655 May 29 12:16 L3BNDmk6he7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFbdKDmoZ4RUn.diag
2025-05-29 14:16:34 (4196): Guest Log: Looking for outputfile HITS.44871837._093665.pool.root.1
2025-05-29 14:16:34 (4196): Guest Log: No HITS file was produced
2025-05-29 14:16:34 (4196): Guest Log: Successfully finished the ATLAS job!
2025-05-29 14:16:34 (4196): Guest Log: Copying the results back to the shared directory!
2025-05-29 14:16:34 (4196): Guest Log:  *** Contents of shared directory: ***
2025-05-29 14:16:34 (4196): Guest Log: total 220448
2025-05-29 14:16:34 (4196): Guest Log: -rwxrwxrwx. 1 root root 225073511 May 29 11:59 ATLAS.root_0
2025-05-29 14:16:34 (4196): Guest Log: -rwxrwxrwx. 1 root root      9128 May 29 11:59 init_data.xml
2025-05-29 14:16:34 (4196): Guest Log: -rwxrwxrwx. 1 root root    508879 May 29 05:24 input.tar.gz
2025-05-29 14:16:34 (4196): Guest Log: -rwxrwxrwx. 1 root root    122880 May 29 12:16 result.tar.gz
2025-05-29 14:16:34 (4196): Guest Log: -rwxrwxrwx. 1 root root     15093 May 29 05:24 start_atlas.sh
2025-05-29 14:16:34 (4196): Guest Log:  *** Success! Shutting down the machine. ***
2025-05-29 14:16:34 (4196): VM Completion File Detected.
2025-05-29 14:16:34 (4196): Powering off VM.
2025-05-29 14:16:34 (4196): Successfully stopped VM.
2025-05-29 14:16:34 (4196): Deregistering VM. (boinc_fa2b5227ecf5924d, slot#0)
2025-05-29 14:16:34 (4196): Removing network bandwidth throttle group from VM.
2025-05-29 14:16:34 (4196): Removing VM from VirtualBox.
14:16:40 (4196): called boinc_finish(0)

</stderr_txt>
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