Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:44:18 (1379322): wrapper (7.7.26015): starting
04:44:18 (1379322): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 04:44:18] Arguments: --nthreads 4
[2025-06-05 04:44:18] Threads: 4
[2025-06-05 04:44:18] Checking for CVMFS
[2025-06-05 04:44:18] No cvmfs_config command found, will try listing directly
[2025-06-05 04:44:18] CVMFS is ok
[2025-06-05 04:44:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 04:44:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 04:44:18] Further information can be found at the LHC@home message board.
[2025-06-05 04:44:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:44:18] Checking for apptainer binary...
[2025-06-05 04:44:18] which: no apptainer in ((null))
[2025-06-05 04:44:18] apptainer is not installed, using version from CVMFS
[2025-06-05 04:44:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:44:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-06-05 04:44:18] apptainer works
[2025-06-05 04:44:18] Set ATHENA_PROC_NUMBER=4
[2025-06-05 04:44:18] Set ATHENA_CORE_NUMBER=4
[2025-06-05 04:44:18] Starting ATLAS job with PandaID=6668980530
[2025-06-05 04:44:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:16:49]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:16:49] 2025-06-05 06:16:22,056 | INFO     | PID=1385700 has CPU usage=15.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 08:16:49] 2025-06-05 06:16:22,056 | INFO     | .. there are 14 such processes running
[2025-06-05 08:16:49] 2025-06-05 06:16:23,257 | WARNING  | process 1393438 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 08:16:49] 2025-06-05 06:16:23,257 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6668980530/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:16:49] 2025-06-05 06:16:24,024 | INFO     | number of running child processes to parent process 1393438: 1
[2025-06-05 08:16:49] 2025-06-05 06:16:24,024 | INFO     | maximum number of monitored processes: 6
[2025-06-05 08:16:49] 2025-06-05 06:16:26,527 | INFO     | monitor loop #875: job 0:6668980530 is in state 'finished'
[2025-06-05 08:16:49] 2025-06-05 06:16:26,527 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:16:49] 2025-06-05 06:16:27,147 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 08:16:49] 2025-06-05 06:16:27,147 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6668980530/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:16:49] 2025-06-05 06:16:27,148 | INFO     | extracted standard info from prmon json
[2025-06-05 08:16:49] 2025-06-05 06:16:27,148 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:16:49] 2025-06-05 06:16:27,148 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:16:49] 2025-06-05 06:16:27,148 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:16:49] 2025-06-05 06:16:27,148 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:16:49] 2025-06-05 06:16:27,152 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:16:49] 2025-06-05 06:16:27,152 | INFO     | sum of square deviations: 2790348132.0
[2025-06-05 08:16:49] 2025-06-05 06:16:27,154 | INFO     | sum of deviations: 24673892958.5
[2025-06-05 08:16:49] 2025-06-05 06:16:27,154 | INFO     | mean x: 1749097816.5
[2025-06-05 08:16:49] 2025-06-05 06:16:27,154 | INFO     | mean y: 2322677.860576923
[2025-06-05 08:16:49] 2025-06-05 06:16:27,154 | INFO     | -- intersect: -15464224955.86926
[2025-06-05 08:16:49] 2025-06-05 06:16:27,154 | INFO     | intersect: -15464224955.86926
[2025-06-05 08:16:49] 2025-06-05 06:16:27,154 | INFO     | chi2: 1.5546550366703815
[2025-06-05 08:16:49] 2025-06-05 06:16:27,155 | INFO     | sum of square deviations: 2593916542.0
[2025-06-05 08:16:49] 2025-06-05 06:16:27,156 | INFO     | sum of deviations: 23953684777.000004
[2025-06-05 08:16:49] 2025-06-05 06:16:27,156 | INFO     | mean x: 1749097664.0
[2025-06-05 08:16:49] 2025-06-05 06:16:27,156 | INFO     | mean y: 2322118.699507389
[2025-06-05 08:16:49] 2025-06-05 06:16:27,156 | INFO     | -- intersect: -16149829814.199137
[2025-06-05 08:16:49] 2025-06-05 06:16:27,156 | INFO     | intersect: -16149829814.199137
[2025-06-05 08:16:49] 2025-06-05 06:16:27,156 | INFO     | chi2: 1.5556774620912235
[2025-06-05 08:16:49] 2025-06-05 06:16:27,157 | INFO     | current chi2=1.5556774620912235 (change=-0.06576542041324508 %)
[2025-06-05 08:16:49] 2025-06-05 06:16:27,157 | INFO     | right removable region: 202
[2025-06-05 08:16:49] 2025-06-05 06:16:27,157 | INFO     | sum of square deviations: 2593916542.0
[2025-06-05 08:16:49] 2025-06-05 06:16:27,158 | INFO     | sum of deviations: -6585455019.0
[2025-06-05 08:16:49] 2025-06-05 06:16:27,158 | INFO     | mean x: 1749097969.0
[2025-06-05 08:16:49] 2025-06-05 06:16:27,158 | INFO     | mean y: 2346687.906403941
[2025-06-05 08:16:49] 2025-06-05 06:16:27,158 | INFO     | -- intersect: 4442969896.929355
[2025-06-05 08:16:49] 2025-06-05 06:16:27,158 | INFO     | intersect: 4442969896.929355
[2025-06-05 08:16:49] 2025-06-05 06:16:27,159 | INFO     | chi2: 0.01899358020501218
[2025-06-05 08:16:49] 2025-06-05 06:16:27,159 | INFO     | current chi2=0.01899358020501218 (change=98.77827686805101 %)
[2025-06-05 08:16:49] 2025-06-05 06:16:27,159 | INFO     | sum of square deviations: 2406926989.5
[2025-06-05 08:16:49] 2025-06-05 06:16:27,160 | INFO     | sum of deviations: -7491626702.5
[2025-06-05 08:16:49] 2025-06-05 06:16:27,160 | INFO     | mean x: 1749098121.5
[2025-06-05 08:16:49] 2025-06-05 06:16:27,160 | INFO     | mean y: 2347409.621212121
[2025-06-05 08:16:49] 2025-06-05 06:16:27,161 | INFO     | -- intersect: 5446463599.885898
[2025-06-05 08:16:49] 2025-06-05 06:16:27,161 | INFO     | intersect: 5446463599.885898
[2025-06-05 08:16:49] 2025-06-05 06:16:27,161 | INFO     | chi2: 0.014366971636932178
[2025-06-05 08:16:49] 2025-06-05 06:16:27,161 | INFO     | current chi2=0.014366971636932178 (change=24.35880185905707 %)
[2025-06-05 08:16:49] 2025-06-05 06:16:27,161 | INFO     | left removable region: 20
[2025-06-05 08:16:49] 2025-06-05 06:16:27,161 | INFO     | sum of square deviations: 1869302025.5
[2025-06-05 08:16:49] 2025-06-05 06:16:27,162 | INFO     | sum of deviations: -4186390350.0000005
[2025-06-05 08:16:49] 2025-06-05 06:16:27,162 | INFO     | mean x: 1749098243.5
[2025-06-05 08:16:49] 2025-06-05 06:16:27,162 | INFO     | mean y: 2344460.1428571427
[2025-06-05 08:16:49] 2025-06-05 06:16:27,163 | INFO     | -- intersect: 3919532751.7629642
[2025-06-05 08:16:49] 2025-06-05 06:16:27,163 | INFO     | intersect: 3919532751.7629642
[2025-06-05 08:16:49] 2025-06-05 06:16:27,163 | INFO     | chi2: 0.010914739456514878
[2025-06-05 08:16:49] 2025-06-05 06:16:27,163 | INFO     | -- intersect: 3919532751.7629642
[2025-06-05 08:16:49] 2025-06-05 06:16:27,163 | INFO     | current memory leak: -2.24 B/s (using 182 data points, chi2=0.01)
[2025-06-05 08:16:49] 2025-06-05 06:16:27,163 | INFO     | ..............................
[2025-06-05 08:16:49] 2025-06-05 06:16:27,163 | INFO     | . Timing measurements:
[2025-06-05 08:16:49] 2025-06-05 06:16:27,164 | INFO     | . get job = 0 s
[2025-06-05 08:16:49] 2025-06-05 06:16:27,164 | INFO     | . initial setup = 1 s
[2025-06-05 08:16:49] 2025-06-05 06:16:27,164 | INFO     | . payload setup = 9 s
[2025-06-05 08:16:49] 2025-06-05 06:16:27,164 | INFO     | . stage-in = 0 s
[2025-06-05 08:16:49] 2025-06-05 06:16:27,164 | INFO     | . payload execution = 12676 s
[2025-06-05 08:16:49] 2025-06-05 06:16:27,164 | INFO     | . stage-out = 1 s
[2025-06-05 08:16:49] 2025-06-05 06:16:27,164 | INFO     | . log creation = 0 s
[2025-06-05 08:16:49] 2025-06-05 06:16:27,164 | INFO     | ..............................
[2025-06-05 08:16:49] 2025-06-05 06:16:27,256 | INFO     | 
[2025-06-05 08:16:49] 2025-06-05 06:16:27,256 | INFO     | job summary report
[2025-06-05 08:16:49] 2025-06-05 06:16:27,256 | INFO     | --------------------------------------------------
[2025-06-05 08:16:49] 2025-06-05 06:16:27,256 | INFO     | PanDA job id: 6668980530
[2025-06-05 08:16:49] 2025-06-05 06:16:27,256 | INFO     | task id: 44871837
[2025-06-05 08:16:49] 2025-06-05 06:16:27,256 | INFO     | errors: (none)
[2025-06-05 08:16:49] 2025-06-05 06:16:27,256 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:16:49] 2025-06-05 06:16:27,256 | INFO     | pilot state: finished 
[2025-06-05 08:16:49] 2025-06-05 06:16:27,256 | INFO     | transexitcode: 0
[2025-06-05 08:16:49] 2025-06-05 06:16:27,256 | INFO     | exeerrorcode: 0
[2025-06-05 08:16:49] 2025-06-05 06:16:27,256 | INFO     | exeerrordiag: 
[2025-06-05 08:16:49] 2025-06-05 06:16:27,257 | INFO     | exitcode: 0
[2025-06-05 08:16:49] 2025-06-05 06:16:27,257 | INFO     | exitmsg: OK
[2025-06-05 08:16:49] 2025-06-05 06:16:27,257 | INFO     | cpuconsumptiontime: 48096 s
[2025-06-05 08:16:49] 2025-06-05 06:16:27,257 | INFO     | nevents: 400
[2025-06-05 08:16:49] 2025-06-05 06:16:27,257 | INFO     | neventsw: 0
[2025-06-05 08:16:49] 2025-06-05 06:16:27,257 | INFO     | pid: 1393438
[2025-06-05 08:16:49] 2025-06-05 06:16:27,257 | INFO     | pgrp: 1393438
[2025-06-05 08:16:49] 2025-06-05 06:16:27,257 | INFO     | corecount: 4
[2025-06-05 08:16:49] 2025-06-05 06:16:27,257 | INFO     | event service: False
[2025-06-05 08:16:49] 2025-06-05 06:16:27,257 | INFO     | sizes: {0: 2397232, 1: 2397431, 6: 2397637, 11: 2397665, 12689: 2427775, 12691: 2436922, 12699: 2437036}
[2025-06-05 08:16:49] 2025-06-05 06:16:27,257 | INFO     | --------------------------------------------------
[2025-06-05 08:16:49] 2025-06-05 06:16:27,257 | INFO     | 
[2025-06-05 08:16:49] 2025-06-05 06:16:27,257 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2025-06-05 08:16:49] 2025-06-05 06:16:27,286 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:16:49] 2025-06-05 06:16:27,286 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:16:49] 2025-06-05 06:16:27,287 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:16:49] 2025-06-05 06:16:27,287 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:16:49] 2025-06-05 06:16:27,287 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:16:49] 2025-06-05 06:16:27,287 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:16:49] 2025-06-05 06:16:27,287 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:16:49] 2025-06-05 06:16:27,287 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:16:49] 2025-06-05 06:16:27,287 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:16:49] 2025-06-05 06:16:27,287 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:16:49] 2025-06-05 06:16:27,287 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:16:49] 2025-06-05 06:16:27,287 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:16:49] 2025-06-05 06:16:27,287 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:16:49] 2025-06-05 06:16:27,288 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:16:49] 2025-06-05 06:16:27,288 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:16:49] 2025-06-05 06:16:27,288 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:16:49] 2025-06-05 06:16:27,288 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:16:49] 2025-06-05 06:16:27,288 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:16:49] 2025-06-05 06:16:27,288 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:16:49] 2025-06-05 06:16:27,288 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:16:49] 2025-06-05 06:16:27,288 | INFO     | job 6668980530 has completed (purged errors)
[2025-06-05 08:16:49] 2025-06-05 06:16:27,288 | INFO     | overall cleanup function is called
[2025-06-05 08:16:49] 2025-06-05 06:16:28,298 | INFO     | --- collectZombieJob: --- 10, [1393438]
[2025-06-05 08:16:49] 2025-06-05 06:16:28,298 | INFO     | zombie collector waiting for pid 1393438
[2025-06-05 08:16:49] 2025-06-05 06:16:28,298 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:16:49] 2025-06-05 06:16:28,298 | INFO     | collected zombie processes
[2025-06-05 08:16:49] 2025-06-05 06:16:28,298 | INFO     | will attempt to kill all subprocesses of pid=1393438
[2025-06-05 08:16:49] 2025-06-05 06:16:29,007 | INFO     | process IDs to be killed: [1393438] (in reverse order)
[2025-06-05 08:16:49] 2025-06-05 06:16:29,253 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:16:49] 2025-06-05 06:16:29,253 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:16:49] 2025-06-05 06:16:29,279 | INFO     | did not find any defunct processes belonging to 1393438
[2025-06-05 08:16:49] 2025-06-05 06:16:29,305 | INFO     | did not find any defunct processes belonging to 1393438
[2025-06-05 08:16:49] 2025-06-05 06:16:29,305 | INFO     | ready for new job
[2025-06-05 08:16:49] 2025-06-05 06:16:29,306 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:16:49] 2025-06-05 06:16:29,308 | INFO     | **************************************
[2025-06-05 08:16:49] 2025-06-05 06:16:29,308 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:16:49] 2025-06-05 06:16:29,308 | INFO     | **************************************
[2025-06-05 08:16:49] 2025-06-05 06:16:29,308 | INFO     | 
[2025-06-05 08:16:49] 2025-06-05 06:16:29,316 | INFO     | architecture information:
[2025-06-05 08:16:49] 2025-06-05 06:16:29,317 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:16:49] 2025-06-05 06:16:29,338 | INFO     | cat /etc/os-release:
[2025-06-05 08:16:49] NAME="CentOS Linux"
[2025-06-05 08:16:49] VERSION="7 (Core)"
[2025-06-05 08:16:49] ID="centos"
[2025-06-05 08:16:49] ID_LIKE="rhel fedora"
[2025-06-05 08:16:49] VERSION_ID="7"
[2025-06-05 08:16:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:16:49] ANSI_COLOR="0;31"
[2025-06-05 08:16:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:16:49] HOME_URL="https://www.centos.org/"
[2025-06-05 08:16:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:16:49] 
[2025-06-05 08:16:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:16:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:16:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:16:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:16:49] 
[2025-06-05 08:16:49] 2025-06-05 06:16:29,339 | INFO     | **************************************
[2025-06-05 08:16:49] 2025-06-05 06:16:29,841 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2025-06-05 08:16:49] 2025-06-05 06:16:29,866 | INFO     | sufficient remaining disk space (3278688485376 B)
[2025-06-05 08:16:49] 2025-06-05 06:16:29,867 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:16:49] 2025-06-05 06:16:29,867 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:16:49] 2025-06-05 06:16:29,867 | INFO     | update_server=False
[2025-06-05 08:16:49] 2025-06-05 06:16:29,868 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:16:49] 2025-06-05 06:16:29,868 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:16:49] 2025-06-05 06:16:29,869 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:16:49] 2025-06-05 06:16:30,036 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:16:49] 2025-06-05 06:16:30,036 | INFO     | aborting loop
[2025-06-05 08:16:49] 2025-06-05 06:16:30,075 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:16:49] 2025-06-05 06:16:30,075 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:16:49] 2025-06-05 06:16:30,075 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:16:49] 2025-06-05 06:16:30,103 | INFO     | all payload control threads have been joined
[2025-06-05 08:16:49] 2025-06-05 06:16:30,204 | INFO     | all job control threads have been joined
[2025-06-05 08:16:49] 2025-06-05 06:16:30,570 | INFO     | all data control threads have been joined
[2025-06-05 08:16:49] 2025-06-05 06:16:30,873 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:16:49] 2025-06-05 06:16:31,000 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:16:49] 2025-06-05 06:16:31,041 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:16:49] 2025-06-05 06:16:31,106 | INFO     | [payload] control thread has finished
[2025-06-05 08:16:49] 2025-06-05 06:16:31,205 | INFO     | [job] control thread has finished
[2025-06-05 08:16:49] 2025-06-05 06:16:31,227 | INFO     | [job] validate thread has finished
[2025-06-05 08:16:49] 2025-06-05 06:16:31,265 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:16:49] 2025-06-05 06:16:31,358 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:16:49] 2025-06-05 06:16:31,393 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:16:49] 2025-06-05 06:16:31,575 | INFO     | [data] control thread has finished
[2025-06-05 08:16:49] 2025-06-05 06:16:31,675 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:16:49] 2025-06-05 06:16:31,874 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:16:49] 2025-06-05 06:16:32,210 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:16:49] 2025-06-05 06:16:32,266 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:16:49] 2025-06-05 06:16:32,283 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:16:49] 2025-06-05 06:16:33,271 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:16:49] 2025-06-05 06:16:33,875 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:16:49] 2025-06-05 06:16:35,452 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22565916108608)>', '<ExcThread(monitor, started 22565676349184)>']
[2025-06-05 08:16:49] 2025-06-05 06:16:36,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:16:49] 2025-06-05 06:16:36,106 | INFO     | [monitor] control thread has ended
[2025-06-05 08:16:49] 2025-06-05 06:16:40,468 | INFO     | all workflow threads have been joined
[2025-06-05 08:16:49] 2025-06-05 06:16:40,468 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:16:49] 2025-06-05 06:16:40,468 | INFO     | traces error code: 0
[2025-06-05 08:16:49] 2025-06-05 06:16:40,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:16:49] 2025-06-05 06:16:40,689 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:16:49] 2025-06-05 06:16:40,693 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:16:49] 2025-06-05 06:16:40,697 [wrapper] pilotpid: 1385700
[2025-06-05 08:16:49] 2025-06-05 06:16:40,701 [wrapper] Pilot exit status: 0
[2025-06-05 08:16:49] 2025-06-05 06:16:40,716 [wrapper] pandaids: 6668980530
[2025-06-05 08:16:49] 2025-06-05 06:16:40,881 [wrapper] cleanup supervisor_pilot 2200675 1385701
[2025-06-05 08:16:49] 2025-06-05 06:16:40,885 [wrapper] Test setup, not cleaning
[2025-06-05 08:16:49] 2025-06-05 06:16:40,889 [wrapper] apfmon messages muted
[2025-06-05 08:16:49] 2025-06-05 06:16:40,893 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:16:49] 2025-06-05 06:16:40,896 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:16:49]  *** Error codes and diagnostics ***
[2025-06-05 08:16:49]     "exeErrorCode": 0,
[2025-06-05 08:16:49]     "exeErrorDiag": "",
[2025-06-05 08:16:49]     "pilotErrorCode": 0,
[2025-06-05 08:16:49]     "pilotErrorDiag": "",
[2025-06-05 08:16:49]  *** Listing of results directory ***
[2025-06-05 08:16:49] total 419848
[2025-06-05 08:16:49] -rw-r--r-- 1 boinc boinc    495897 May 29 00:21 pilot3.tar.gz
[2025-06-05 08:16:49] -rwx------ 1 boinc boinc     37140 May 29 00:28 runpilot2-wrapper.sh
[2025-06-05 08:16:49] -rw-r--r-- 1 boinc boinc      5111 May 29 00:28 queuedata.json
[2025-06-05 08:16:49] -rw-r--r-- 1 boinc boinc       100 Jun  5 04:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:16:49] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 04:44 run_atlas
[2025-06-05 08:16:49] -rw-r--r-- 1 boinc boinc       105 Jun  5 04:44 job.xml
[2025-06-05 08:16:49] -rw-r--r-- 1 boinc boinc      6685 Jun  5 04:44 init_data.xml
[2025-06-05 08:16:49] -rw-r--r-- 2 boinc boinc 223508582 Jun  5 04:44 EVNT.44871834._003553.pool.root.1
[2025-06-05 08:16:49] drwxrwx--x 2 boinc boinc      4096 Jun  5 04:44 shared
[2025-06-05 08:16:49] -rw-r--r-- 2 boinc boinc    508877 Jun  5 04:44 input.tar.gz
[2025-06-05 08:16:49] -rw-r--r-- 2 boinc boinc     15093 Jun  5 04:44 start_atlas.sh
[2025-06-05 08:16:49] -rw-r--r-- 1 boinc boinc         0 Jun  5 04:44 boinc_lockfile
[2025-06-05 08:16:49] -rw-r--r-- 1 boinc boinc      2559 Jun  5 04:44 pandaJob.out
[2025-06-05 08:16:49] -rw------- 1 boinc boinc    987109 Jun  5 04:44 agis_schedconf.cvmfs.json
[2025-06-05 08:16:49] drwx------ 4 boinc boinc      4096 Jun  5 04:44 pilot3
[2025-06-05 08:16:49] -rw------- 1 boinc boinc        95 Jun  5 08:15 pilot_heartbeat.json
[2025-06-05 08:16:49] -rw------- 1 boinc boinc 199556042 Jun  5 08:15 HITS.44871837._091369.pool.root.1
[2025-06-05 08:16:49] -rw-r--r-- 1 boinc boinc       529 Jun  5 08:16 boinc_task_state.xml
[2025-06-05 08:16:49] -rw------- 1 boinc boinc      1030 Jun  5 08:16 memory_monitor_summary.json
[2025-06-05 08:16:49] -rw------- 1 boinc boinc   1598969 Jun  5 08:16 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:16:49] -rw------- 1 boinc boinc    335813 Jun  5 08:16 log.44871837._091369.job.log.tgz.1
[2025-06-05 08:16:49] -rw------- 1 boinc boinc      7701 Jun  5 08:16 heartbeat.json
[2025-06-05 08:16:49] -rw-r--r-- 1 boinc boinc        27 Jun  5 08:16 wrapper_checkpoint.txt
[2025-06-05 08:16:49] -rw------- 1 boinc boinc      4364 Jun  5 08:16 pilotlog.txt
[2025-06-05 08:16:49] -rw------- 1 boinc boinc   1176088 Jun  5 08:16 log.44871837._091369.job.log.1
[2025-06-05 08:16:49] -rw------- 1 boinc boinc       357 Jun  5 08:16 output.list
[2025-06-05 08:16:49] -rw-r--r-- 1 boinc boinc       620 Jun  5 08:16 runtime_log
[2025-06-05 08:16:49] -rw------- 1 boinc boinc   1536000 Jun  5 08:16 result.tar.gz
[2025-06-05 08:16:49] -rw-r--r-- 1 boinc boinc      9026 Jun  5 08:16 runtime_log.err
[2025-06-05 08:16:49] -rw------- 1 boinc boinc       666 Jun  5 08:16 PYhKDmKRee7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbFUKDmxB4XVn.diag
[2025-06-05 08:16:49] -rw-r--r-- 1 boinc boinc      8192 Jun  5 08:16 boinc_mmap_file
[2025-06-05 08:16:49] -rw-r--r-- 1 boinc boinc     20959 Jun  5 08:16 stderr.txt
[2025-06-05 08:16:49] HITS file was successfully produced:
[2025-06-05 08:16:49] -rw------- 1 boinc boinc 199556042 Jun  5 08:15 shared/HITS.pool.root.1
[2025-06-05 08:16:49]  *** Contents of shared directory: ***
[2025-06-05 08:16:49] total 415176
[2025-06-05 08:16:49] -rw-r--r-- 2 boinc boinc 223508582 Jun  5 04:44 ATLAS.root_0
[2025-06-05 08:16:49] -rw-r--r-- 2 boinc boinc    508877 Jun  5 04:44 input.tar.gz
[2025-06-05 08:16:49] -rw-r--r-- 2 boinc boinc     15093 Jun  5 04:44 start_atlas.sh
[2025-06-05 08:16:49] -rw------- 1 boinc boinc 199556042 Jun  5 08:15 HITS.pool.root.1
[2025-06-05 08:16:49] -rw------- 1 boinc boinc   1536000 Jun  5 08:16 result.tar.gz
08:16:50 (1379322): run_atlas exited; CPU time 48859.364027
08:16:50 (1379322): called boinc_finish(0)

</stderr_txt>
]]>

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