Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:45:57 (319535): wrapper (7.7.26015): starting
21:45:57 (319535): wrapper: running run_atlas (--nthreads 12)
[2025-05-28 21:45:57] Arguments: --nthreads 12
[2025-05-28 21:45:57] Threads: 12
[2025-05-28 21:45:57] Checking for CVMFS
[2025-05-28 21:45:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-05-28 21:45:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-05-28 21:45:57] Running cvmfs_config stat atlas.cern.ch
[2025-05-28 21:45:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-05-28 21:45:57] 2.11.5.0 3414752 14495 223624 146543 1 524 38217379 45568001 12814 130560 0 172820039 99.827 104888422 29976 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-05-28 21:45:57] CVMFS is ok
[2025-05-28 21:45:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-05-28 21:45:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-05-28 21:45:57] Further information can be found at the LHC@home message board.
[2025-05-28 21:45:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-05-28 21:45:57] Checking for apptainer binary...
[2025-05-28 21:45:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-05-28 21:45:57] Running /usr/bin/apptainer --version
[2025-05-28 21:45:57] apptainer version 1.4.0-1.el9
[2025-05-28 21:45:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-05-28 21:45:57] wns0044.triumf.lcg
[2025-05-28 21:45:57] apptainer works
[2025-05-28 21:45:57] Set ATHENA_PROC_NUMBER=12
[2025-05-28 21:45:57] Set ATHENA_CORE_NUMBER=12
[2025-05-28 21:45:57] Starting ATLAS job with PandaID=6669090313
[2025-05-28 21:45:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-05-28 21:49:25]  *** The last 200 lines of the pilot log: ***
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | WARNING  | found no stored workdir sizes
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | WARNING  | wrong length of table data, x=[1748494007.0], y=[1342.0] (must be same and length>=4)
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | ..............................
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . Timing measurements:
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . get job = 0 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . initial setup = 4 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . payload setup = 7 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . stage-in = 0 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . payload execution = 26 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . stage-out = 0 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . log creation = 0 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,155 | INFO     | ..............................
[2025-05-28 21:49:25] 2025-05-29 04:49:11,155 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 21:49:25] 2025-05-29 04:49:11,155 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669090313/pilotlog.txt
[2025-05-28 21:49:25] 2025-05-29 04:49:11,205 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-05-28 21:49:25] - Log from pilotlog.txt -
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | INFO     | extracted standard info from prmon json
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | WARNING  | found no stored workdir sizes
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | WARNING  | wrong length of table data, x=[1748494007.0], y=[1342.0] (must be same and length>=4)
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | ..............................
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . Timing measurements:
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . get job = 0 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . initial setup = 4 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . payload setup = 7 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . stage-in = 0 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . payload execution = 26 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . stage-out = 0 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . log creation = 0 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,155 | INFO     | ..............................
[2025-05-28 21:49:25] 2025-05-29 04:49:11,155 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 21:49:25] 2025-05-29 04:49:11,155 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669090313/pilotlog.txt
[2025-05-28 21:49:25] 2025-05-29 04:49:11,205 | WARNING  | 
[2025-05-28 21:49:25] [begin log extracts]
[2025-05-28 21:49:25] - Log from pilotlog.txt -
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | INFO     | extracted standard info from prmon json
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | INFO     | extracted standard memory fields from prmon json
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | WARNING  | found no stored workdir sizes
[2025-05-28 21:49:25] 2025-05-29 04:49:11,153 | INFO     | will not add max space = 0 B to job metrics
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | WARNING  | wrong length of table data, x=[1748494007.0], y=[1342.0] (must be same and length>=4)
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | ..............................
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . Timing measurements:
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . get job = 0 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . initial setup = 4 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . payload setup = 7 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . stage-in = 0 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . payload execution = 26 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . stage-out = 0 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,154 | INFO     | . log creation = 0 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,155 | INFO     | ..............................
[2025-05-28 21:49:25] 2025-05-29 04:49:11,155 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-05-28 21:49:25] 2025-05-29 04:49:11,155 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6669090313/pilotlog.txt
[2025-05-28 21:49:25] [end log extracts]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,205 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-05-28 21:49:25] 2025-05-29 04:49:11,206 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-05-28 21:49:25] 2025-05-29 04:49:11,398 | INFO     | 
[2025-05-28 21:49:25] 2025-05-29 04:49:11,398 | INFO     | job summary report
[2025-05-28 21:49:25] 2025-05-29 04:49:11,398 | INFO     | --------------------------------------------------
[2025-05-28 21:49:25] 2025-05-29 04:49:11,398 | INFO     | PanDA job id: 6669090313
[2025-05-28 21:49:25] 2025-05-29 04:49:11,398 | INFO     | task id: 44871837
[2025-05-28 21:49:25] 2025-05-29 04:49:11,398 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-05-28 21:46:58,464 CRITICAL Transform executor raised TransformValidationExceptio
[2025-05-28 21:49:25] 2025-05-29 04:49:11,398 | INFO     | status: LOG_TRANSFER = DONE 
[2025-05-28 21:49:25] 2025-05-29 04:49:11,398 | INFO     | pilot state: failed 
[2025-05-28 21:49:25] 2025-05-29 04:49:11,399 | INFO     | transexitcode: 65
[2025-05-28 21:49:25] 2025-05-29 04:49:11,399 | INFO     | exeerrorcode: 65
[2025-05-28 21:49:25] 2025-05-29 04:49:11,399 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 21:49:25] 2025-05-29 04:49:11,399 | INFO     | exitcode: 65
[2025-05-28 21:49:25] 2025-05-29 04:49:11,399 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-05-28 21:49:25] 2025-05-29 04:49:11,399 | INFO     | cpuconsumptiontime: 15 s
[2025-05-28 21:49:25] 2025-05-29 04:49:11,399 | INFO     | nevents: 0
[2025-05-28 21:49:25] 2025-05-29 04:49:11,399 | INFO     | neventsw: 0
[2025-05-28 21:49:25] 2025-05-29 04:49:11,399 | INFO     | pid: 329395
[2025-05-28 21:49:25] 2025-05-29 04:49:11,399 | INFO     | pgrp: 329395
[2025-05-28 21:49:25] 2025-05-29 04:49:11,399 | INFO     | corecount: 12
[2025-05-28 21:49:25] 2025-05-29 04:49:11,399 | INFO     | event service: False
[2025-05-28 21:49:25] 2025-05-29 04:49:11,399 | INFO     | sizes: {0: 2405231, 7: 2405437, 11: 2405465, 38: 2428617, 39: 2428593, 40: 2433012, 163: 2433126}
[2025-05-28 21:49:25] 2025-05-29 04:49:11,399 | INFO     | --------------------------------------------------
[2025-05-28 21:49:25] 2025-05-29 04:49:11,399 | INFO     | 
[2025-05-28 21:49:25] 2025-05-29 04:49:11,399 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-05-28 21:49:25] 2025-05-29 04:49:11,432 | INFO     | queue jobs had 0 job(s) [purged]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,433 | INFO     | queue payloads had 0 job(s) [purged]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,433 | INFO     | queue data_in had 0 job(s) [purged]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,433 | INFO     | queue data_out had 0 job(s) [purged]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,433 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,433 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,433 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,433 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,433 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,433 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,433 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,433 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,433 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,433 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,434 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,434 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,434 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,434 | INFO     | queue completed_jobids has 1 job(s)
[2025-05-28 21:49:25] 2025-05-29 04:49:11,434 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,434 | INFO     | queue messages had 0 job(s) [purged]
[2025-05-28 21:49:25] 2025-05-29 04:49:11,434 | INFO     | job 6669090313 has completed (purged errors)
[2025-05-28 21:49:25] 2025-05-29 04:49:11,434 | INFO     | overall cleanup function is called
[2025-05-28 21:49:25] 2025-05-29 04:49:12,439 | INFO     | --- collectZombieJob: --- 10, [329395]
[2025-05-28 21:49:25] 2025-05-29 04:49:12,440 | INFO     | zombie collector waiting for pid 329395
[2025-05-28 21:49:25] 2025-05-29 04:49:12,440 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-05-28 21:49:25] 2025-05-29 04:49:12,440 | INFO     | collected zombie processes
[2025-05-28 21:49:25] 2025-05-29 04:49:12,440 | INFO     | will attempt to kill all subprocesses of pid=329395
[2025-05-28 21:49:25] 2025-05-29 04:49:12,586 | INFO     | process IDs to be killed: [329395] (in reverse order)
[2025-05-28 21:49:25] 2025-05-29 04:49:12,639 | WARNING  | found no corresponding commands to process id(s)
[2025-05-28 21:49:25] 2025-05-29 04:49:12,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-05-28 21:49:25] 2025-05-29 04:49:12,645 | INFO     | did not find any defunct processes belonging to 329395
[2025-05-28 21:49:25] 2025-05-29 04:49:12,650 | INFO     | did not find any defunct processes belonging to 329395
[2025-05-28 21:49:25] 2025-05-29 04:49:12,650 | INFO     | ready for new job
[2025-05-28 21:49:25] 2025-05-29 04:49:12,651 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-05-28 21:49:25] 2025-05-29 04:49:12,652 | INFO     | **************************************
[2025-05-28 21:49:25] 2025-05-29 04:49:12,652 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-05-28 21:49:25] 2025-05-29 04:49:12,652 | INFO     | **************************************
[2025-05-28 21:49:25] 2025-05-29 04:49:12,652 | INFO     | 
[2025-05-28 21:49:25] 2025-05-29 04:49:12,654 | INFO     | architecture information:
[2025-05-28 21:49:25] 2025-05-29 04:49:12,654 | INFO     | executing command: cat /etc/os-release
[2025-05-28 21:49:25] 2025-05-29 04:49:12,666 | INFO     | cat /etc/os-release:
[2025-05-28 21:49:25] NAME="CentOS Linux"
[2025-05-28 21:49:25] VERSION="7 (Core)"
[2025-05-28 21:49:25] ID="centos"
[2025-05-28 21:49:25] ID_LIKE="rhel fedora"
[2025-05-28 21:49:25] VERSION_ID="7"
[2025-05-28 21:49:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-05-28 21:49:25] ANSI_COLOR="0;31"
[2025-05-28 21:49:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-05-28 21:49:25] HOME_URL="https://www.centos.org/"
[2025-05-28 21:49:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-05-28 21:49:25] 
[2025-05-28 21:49:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-05-28 21:49:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-05-28 21:49:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-05-28 21:49:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-05-28 21:49:25] 
[2025-05-28 21:49:25] 2025-05-29 04:49:12,667 | INFO     | **************************************
[2025-05-28 21:49:25] 2025-05-29 04:49:13,170 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-05-28 21:49:25] 2025-05-29 04:49:13,197 | INFO     | sufficient remaining disk space (1934761132032 B)
[2025-05-28 21:49:25] 2025-05-29 04:49:13,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-05-28 21:49:25] 2025-05-29 04:49:13,197 | INFO     | current server update state: UPDATING_FINAL
[2025-05-28 21:49:25] 2025-05-29 04:49:13,198 | INFO     | update_server=False
[2025-05-28 21:49:25] 2025-05-29 04:49:13,198 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-05-28 21:49:25] 2025-05-29 04:49:13,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-05-28 21:49:25] 2025-05-29 04:49:13,198 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-05-28 21:49:25] 2025-05-29 04:49:13,198 | INFO     | found 0 job(s) in 20 queues
[2025-05-28 21:49:25] 2025-05-29 04:49:13,198 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-05-28 21:49:25] 2025-05-29 04:49:13,198 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-05-28 21:49:25] 2025-05-29 04:49:13,198 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-05-28 21:49:25] 2025-05-29 04:49:13,198 | INFO     | aborting loop
[2025-05-28 21:49:25] 2025-05-29 04:49:13,738 | INFO     | all payload control threads have been joined
[2025-05-28 21:49:25] 2025-05-29 04:49:13,934 | INFO     | all data control threads have been joined
[2025-05-28 21:49:25] 2025-05-29 04:49:14,100 | INFO     | all job control threads have been joined
[2025-05-28 21:49:25] 2025-05-29 04:49:14,156 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-05-28 21:49:25] 2025-05-29 04:49:14,203 | INFO     | [job] retrieve thread has finished
[2025-05-28 21:49:25] 2025-05-29 04:49:14,203 | INFO     | [job] queue monitor thread has finished
[2025-05-28 21:49:25] 2025-05-29 04:49:14,204 | INFO     | [job] job monitor thread has finished
[2025-05-28 21:49:25] 2025-05-29 04:49:14,504 | INFO     | [payload] failed_post thread has finished
[2025-05-28 21:49:25] 2025-05-29 04:49:14,693 | INFO     | [data] copytool_in thread has finished
[2025-05-28 21:49:25] 2025-05-29 04:49:14,744 | INFO     | [payload] control thread has finished
[2025-05-28 21:49:25] 2025-05-29 04:49:14,939 | INFO     | [data] control thread has finished
[2025-05-28 21:49:25] 2025-05-29 04:49:15,105 | INFO     | [job] control thread has finished
[2025-05-28 21:49:25] 2025-05-29 04:49:15,230 | INFO     | [payload] execute_payloads thread has finished
[2025-05-28 21:49:25] 2025-05-29 04:49:15,250 | INFO     | [job] validate thread has finished
[2025-05-28 21:49:25] 2025-05-29 04:49:15,461 | INFO     | [job] create_data_payload thread has finished
[2025-05-28 21:49:25] 2025-05-29 04:49:15,525 | INFO     | [payload] validate_pre thread has finished
[2025-05-28 21:49:25] 2025-05-29 04:49:15,608 | INFO     | [payload] validate_post thread has finished
[2025-05-28 21:49:25] 2025-05-29 04:49:15,638 | INFO     | [payload] run_realtimelog thread has finished
[2025-05-28 21:49:25] 2025-05-29 04:49:16,145 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-05-28 21:49:25] 2025-05-29 04:49:16,162 | INFO     | [data] copytool_out thread has finished
[2025-05-28 21:49:25] 2025-05-29 04:49:20,153 | INFO     | [data] queue_monitor thread has finished
[2025-05-28 21:49:25] 2025-05-29 04:49:20,586 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139954991941440)>', '<ExcThread(monitor, started 139954445342464)>']
[2025-05-28 21:49:25] 2025-05-29 04:49:21,241 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-05-28 21:49:25] 2025-05-29 04:49:21,242 | INFO     | [monitor] control thread has ended
[2025-05-28 21:49:25] 2025-05-29 04:49:25,611 | INFO     | all workflow threads have been joined
[2025-05-28 21:49:25] 2025-05-29 04:49:25,612 | INFO     | end of generic workflow (traces error code: 0)
[2025-05-28 21:49:25] 2025-05-29 04:49:25,612 | INFO     | traces error code: 0
[2025-05-28 21:49:25] 2025-05-29 04:49:25,612 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-05-28 21:49:25] 2025-05-29 04:49:25,748 [wrapper] ==== pilot stdout END ====
[2025-05-28 21:49:25] 2025-05-29 04:49:25,763 [wrapper] ==== wrapper stdout RESUME ====
[2025-05-28 21:49:25] 2025-05-29 04:49:25,765 [wrapper] pilotpid: 323087
[2025-05-28 21:49:25] 2025-05-29 04:49:25,767 [wrapper] Pilot exit status: 0
[2025-05-28 21:49:25] 2025-05-29 04:49:25,783 [wrapper] pandaids: 6669090313
[2025-05-28 21:49:25] 2025-05-29 04:49:25,822 [wrapper] cleanup supervisor_pilot  323093 323088
[2025-05-28 21:49:25] 2025-05-29 04:49:25,825 [wrapper] Test setup, not cleaning
[2025-05-28 21:49:25] 2025-05-29 04:49:25,828 [wrapper] apfmon messages muted
[2025-05-28 21:49:25] 2025-05-29 04:49:25,830 [wrapper] ==== wrapper stdout END ====
[2025-05-28 21:49:25] 2025-05-29 04:49:25,832 [wrapper] ==== wrapper stderr END ====
[2025-05-28 21:49:25]  *** Error codes and diagnostics ***
[2025-05-28 21:49:25]     "exeErrorCode": 65,
[2025-05-28 21:49:25]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 21:49:25]     "pilotErrorCode": 1305,
[2025-05-28 21:49:25]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-05-28 21:49:25]  *** Listing of results directory ***
[2025-05-28 21:49:25] total 221524
[2025-05-28 21:49:25] -rw-r--r--. 1 boinc boinc    503527 Apr  3 00:42 pilot3.tar.gz
[2025-05-28 21:49:25] -rwx------. 1 boinc boinc     37140 May 28 18:36 runpilot2-wrapper.sh
[2025-05-28 21:49:25] -rw-r--r--. 1 boinc boinc      5111 May 28 18:36 queuedata.json
[2025-05-28 21:49:25] -rw-r--r--. 1 boinc boinc       100 May 28 21:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-05-28 21:49:25] -rwxr-xr-x. 1 boinc boinc      7986 May 28 21:45 run_atlas
[2025-05-28 21:49:25] -rw-r--r--. 1 boinc boinc       105 May 28 21:45 job.xml
[2025-05-28 21:49:25] -rw-r--r--. 2 boinc boinc 222796845 May 28 21:45 EVNT.44871834._003626.pool.root.1
[2025-05-28 21:49:25] -rw-r--r--. 2 boinc boinc    517091 May 28 21:45 input.tar.gz
[2025-05-28 21:49:25] -rw-r--r--. 1 boinc boinc      6602 May 28 21:45 init_data.xml
[2025-05-28 21:49:25] -rw-r--r--. 2 boinc boinc     15093 May 28 21:45 start_atlas.sh
[2025-05-28 21:49:25] drwxrwx--x. 2 boinc boinc      4096 May 28 21:45 shared
[2025-05-28 21:49:25] -rw-r--r--. 1 boinc boinc         0 May 28 21:45 boinc_lockfile
[2025-05-28 21:49:25] -rw-r--r--. 1 boinc boinc      2559 May 28 21:45 pandaJob.out
[2025-05-28 21:49:25] -rw-------. 1 boinc boinc    993415 May 28 21:46 agis_schedconf.cvmfs.json
[2025-05-28 21:49:25] -rw-------. 1 boinc boinc   1603667 May 28 21:46 agis_ddmendpoints.agis.ALL.json
[2025-05-28 21:49:25] drwx------. 4 boinc boinc      4096 May 28 21:46 pilot3
[2025-05-28 21:49:25] -rw-r--r--. 1 boinc boinc       523 May 28 21:47 boinc_task_state.xml
[2025-05-28 21:49:25] -rw-------. 1 boinc boinc       945 May 28 21:47 memory_monitor_summary.json
[2025-05-28 21:49:25] -rw-------. 1 boinc boinc     20295 May 28 21:47 log.44871837._093257.job.log.tgz.1
[2025-05-28 21:49:25] -rw-------. 1 boinc boinc        95 May 28 21:49 pilot_heartbeat.json
[2025-05-28 21:49:25] -rw-------. 1 boinc boinc      8314 May 28 21:49 heartbeat.json
[2025-05-28 21:49:25] -rw-r--r--. 1 boinc boinc      8192 May 28 21:49 boinc_mmap_file
[2025-05-28 21:49:25] -rw-r--r--. 1 boinc boinc        22 May 28 21:49 wrapper_checkpoint.txt
[2025-05-28 21:49:25] -rw-------. 1 boinc boinc      4475 May 28 21:49 pilotlog.txt
[2025-05-28 21:49:25] -rw-------. 1 boinc boinc     74504 May 28 21:49 log.44871837._093257.job.log.1
[2025-05-28 21:49:25] -rw-------. 1 boinc boinc       188 May 28 21:49 output.list
[2025-05-28 21:49:25] -rw-r--r--. 1 boinc boinc       620 May 28 21:49 runtime_log
[2025-05-28 21:49:25] -rw-------. 1 boinc boinc    112640 May 28 21:49 result.tar.gz
[2025-05-28 21:49:25] -rw-r--r--. 1 boinc boinc      8484 May 28 21:49 runtime_log.err
[2025-05-28 21:49:25] -rw-------. 1 boinc boinc       644 May 28 21:49 HIMLDmHNhe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXPUKDmPF6fNo.diag
[2025-05-28 21:49:25] -rw-r--r--. 1 boinc boinc     21473 May 28 21:49 stderr.txt
[2025-05-28 21:49:25] No HITS result produced
[2025-05-28 21:49:25]  *** Contents of shared directory: ***
[2025-05-28 21:49:25] total 218216
[2025-05-28 21:49:25] -rw-r--r--. 2 boinc boinc 222796845 May 28 21:45 ATLAS.root_0
[2025-05-28 21:49:25] -rw-r--r--. 2 boinc boinc    517091 May 28 21:45 input.tar.gz
[2025-05-28 21:49:25] -rw-r--r--. 2 boinc boinc     15093 May 28 21:45 start_atlas.sh
[2025-05-28 21:49:25] -rw-------. 1 boinc boinc    112640 May 28 21:49 result.tar.gz
21:49:27 (319535): run_atlas exited; CPU time 20.578612
21:49:27 (319535): called boinc_finish(0)

</stderr_txt>
]]>

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